RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL25 (Homo sapiens)

Ensembl gene IDs: ENSG00000183655

Ensembl transcript IDs: ENST00000337975.6, ENST00000536947.2, ENST00000559131.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCGTCCCCTGGGACCACAGCCAAGTGCCTTCGGGCAGCTGGCCTaGCACAGGCGGGGTCTGCTGGGTCTACAGGGTCCAAGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: SRPLGPQPSAFGQLA*HRRGLLGLQGPRSP
Trigger: GGGGCTCCTTGGACCCTGTAGACCCAGCAGACCCCGCCTGTGTCAGGCCAGCTGCCCGAAGGCACTTGGCTGTGGTCCCAGGGGACGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp CCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTaGCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAA +
Preference number: 1 (lower is better)
Translates to: PCSQCPMAGVSVGKP*PKVPPPRGLQDPHQ
Trigger: TTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp GATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTaGTGTCTCCAGCTCACAGCTGCTCCTGGTCTTGGAGGGCAGCGT +
Preference number: 1 (lower is better)
Translates to: DAALVGSAGDTLGSL*CLQLTAAPGLGGQR
Trigger: ACGCTGCCCTCCAAGACCAGGAGCAGCTGTGAGCTGGAGACAGCAGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp GGGGTCTGCTGGGTCTACAGGGTCCAAGGAGCCCCATGCAGCCAGTaGCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTC +
Preference number: 1 (lower is better)
Translates to: GVCWVYRVQGAPCSQ*PMAGVSVGKPCPKV
Trigger: GACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTTGGACCCTGTAGACCCAGCAGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp TCCAGCTCACAGCTGCTCCTGGTCTTGGAGGGCAGCGTGGTCTCCTaGGGAGAAGCCCCCAGTGCTGTTGGCAGGTGTGTGCCATGGGGG +
Preference number: 1 (lower is better)
Translates to: SSSQLLLVLEGSVVS*GEAPSAVGRCVPWG
Trigger: CCCCCATGGCACACACCTGCCAACAGCACTGGGGGCTTCTCCCCAGGAGACCACGCTGCCCTCCAAGACCAGGAGCAGCTGTGAGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp GTGAGGGTCCCGTCACTGTCCTCCACACTGAGATGGATGCGGCCCTaGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTGCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: VRVPSLSSTLRWMRP*WDLQGTPWGPSAVS
Trigger: GGAGACAGCAGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAGTGTGGAGGACAGTGACGGGACCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp CGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTCCACACTGAGATaGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCC +
Preference number: 1 (lower is better)
Translates to: RKRMVRVPSLSSTLR*MRPWWDLQGTPWGP
Trigger: GGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAGTGTGGAGGACAGTGACGGGACCCTCACCATCCTCTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp CCCGGCCCCAGTCCAGGACCTGCCAAACAGGTGATCTCAAGGCTCTaGAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: PGPSPGPAKQVISRL*KCPSPRRQGQSWWQ
Trigger: CTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACCTGTTTGGCAGGTCCTGGACTGGGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp TGCTTTATCTCAATGAAGCAACCCCACGGGTCCAGGCACCCTCCCTaGAGTCCCCGCGGCCAGGCTCCTGAGTGTGCCAGCAGAGCCGTC +
Preference number: 1 (lower is better)
Translates to: CFISMKQPHGSRHPP*SPRGQAPECASRAV
Trigger: GACGGCTCTGCTGGCACACTCAGGAGCCTGGCCGCGGGGACTGCAGGGAGGGTGCCTGGACCCGTGGGGTTGCTTCATTGAGATAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp CCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTaGAGGTGCCTGGGAAGCCCCAAGTTTGGACACCCTGCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: PLRGPNLEPAKQCSH*RCLGSPKFGHPAQS
Trigger: GGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp AGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGCTaGTTAAGTAACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAAT +
Preference number: 1 (lower is better)
Translates to: RGLQDPHQGMGDTRG*LSNWYVHSPLRGPN
Trigger: ATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGTTACTTAAGCAGCCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp CTGTGTCCCCACCGGGCCACAGCACTGAGCAAGGCCCTGAGTAGGTaGGCTGGGACTTACAGCTTTGTGGAAGGGGCCCACAAACCTTGG +
Preference number: 1 (lower is better)
Translates to: LCPHRATALSKALSR*AGTYSFVEGAHKPW
Trigger: CCAAGGTTTGTGGGCCCCTTCCACAAAGCTGTAAGTCCCAGCCCACCTACTCAGGGCCTTGCTCAGTGCTGTGGCCCGGTGGGGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp CGCGGCCCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTaGCTGGGAAGCCCCAAGTTTGGACACCCTGCCCAGTCCCTGTCA +
Preference number: 1 (lower is better)
Translates to: RGPNLEPAKQCSHCR*LGSPKFGHPAQSLS
Trigger: TGACAGGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGGGCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTaGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: SPRRQGQSWWQSMPL*EVCLPTNHCKAEEA
Trigger: GGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp AGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTaGCAGTCCATGCCCCTCTGGGAGGTATGTCTTCCCACAAACCAC +
Preference number: 1 (lower is better)
Translates to: RLCKCPSPRRQGQSW*QSMPLWEVCLPTNH
Trigger: GTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp GCCCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTaGGAAGCCCCAAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: ALILSQPSSVHTAGA*EAPSLDTLPSPCQG
Trigger: GCCCTGACAGGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 90 bp AGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATaGCCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: SVLLPDARVSPGGSP*PSGRYVFPQTTAKL
Trigger: CAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp TCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTaGTGGCAGTCCATGCCCCTCTGGGAGGTATGTCTTCCCACAAAC +
Preference number: 1 (lower is better)
Translates to: SRLCKCPSPRRQGQS*WQSMPLWEVCLPTN
Trigger: GTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp TGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCAAATGGTaGCTTGGGAGTGAGCGAGAGGCATTAGGATGGTCACTGACAGGC +
Preference number: 1 (lower is better)
Translates to: CPVPVRAPTPLPLKW*LGSEREALGWSLTG
Trigger: GCCTGTCAGTGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp CCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCAAATaGTGGCTTGGGAGTGAGCGAGAGGCATTAGGATGGTCACTGACA +
Preference number: 1 (lower is better)
Translates to: PCPVPVRAPTPLPLK*WLGSEREALGWSLT
Trigger: TGTCAGTGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR TCA 90 bp TGTCAGGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTaGGCGAGAGGCATTAGGATGGTCACTGACAGGCGCCAACCTCTC +
Preference number: 1 (lower is better)
Translates to: CQGTNTPPSQMVAWE*ARGIRMVTDRRQPL
Trigger: GAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp CTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATTAGGATaGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGG +
Preference number: 1 (lower is better)
Translates to: LPLKWWLGSEREALG*SLTGANLSIAQVSG
Trigger: CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 90 bp TGGGACTTACAGCTTTGTGGAAGGGGCCCACAAACCTTGGAGGTCTaGGTGTCCTTTGCTAATAAGGCCTCATGGATGTCACTGAGGCCC +
Preference number: 1 (lower is better)
Translates to: WDLQLCGRGPQTLEV*VSFANKASWMSLRP
Trigger: GGGCCTCAGTGACATCCATGAGGCCTTATTAGCAAAGGACACCCAGACCTCCAAGGTTTGTGGGCCCCTTCCACAAAGCTGTAAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGCATGGGGGTCACTGCTaGCTCTCAGGGTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWHGGHC*LSGWAL
Trigger: CAGAGCCCACCCTGAGAGGCAGCAGTGACCCCCATG...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTGCTGCTCCCCAGAGCTaGCAGGGCCCCTTCCACCTC +
Preference number: 2 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSAAPQS*QGPFHL
Trigger: GAGGTGGAAGGGGCCCTGCCAGCTCTGGGGAGCAGC...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR TCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGCAGGCCCAGCTCCACTaGGTGGCCACGAGCAACTGT +
Preference number: 2 (lower is better)
Translates to: ACQWANPAQRSHPQEASRQAQLH*VATSNC
Trigger: ACAGTTGCTCGTGGCCACTCAGTGGAGCTGGGCCTG...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTAAGGATGTGTGGCAGTaGCGCAGCCCCAAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: KEPHAASAPWRACQWANPKDVWQ*RSPKAH
Trigger: GTGGGCTTTGGGGCTGCGGCACTGCCACACATCCTT...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTCCCAGCTCCACTGAGTaGCCACGAGCAACTGTGTCC +
Preference number: 2 (lower is better)
Translates to: KEPHAASAPWRACQWANPPSSTE*PRATVS
Trigger: GGACACAGTTGCTCGTGGCCACTCAGTGGAGCTGGG...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTAGCTGCTCCTGGTCTTaGAGGGCAGCGTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: KEPHAASAPWRACQWANPSCSWS*RAAWSP
Trigger: AGGAGACCACGCTGCCCTCCAAGACCAGGAGCAGCT...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGGGGAAGCCCCAAGTTTaGACACCCTGCCCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: ACQWANPAQRSHPQEASRGKPQV*TPCPVP
Trigger: AGGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCC...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp GGTGATCTCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGACAGCCCAAGGCTGCTaGTCCCCAGAGCTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GDLKALQVSFSPTPGSVLTAQGC*SPELAG
Trigger: CCCTGCCAGCTCTGGGGAGCAGCAGCCTTGGGCTGT...CAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCACGCCAGGGTCAGTCCTaGTGGCAGTCCATGCCCCTC +
Preference number: 2 (lower is better)
Translates to: KFGHPAQSLSGHQHPSLSRQGQS*WQSMPL
Trigger: GAGGGGCATGGACTGCCACCAGGACTGACCCTGGCG...TGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGGTGTCCAAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGAGGGAAAGGATGTGTaGCAGTGCCGCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: KEPHAASAPWRACQWANPEGKDV*QCRSPK
Trigger: TTTGGGGCTGCGGCACTGCCACACATCCTTTCCCTC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCACACTGCAGGTGCCTaGGAAGCCCCAAGTTTGGAC +
Preference number: 2 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTHTAGA*EAPSLD
Trigger: GTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTG...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTTTCCACCTCTCGGAGTaGTGGCCCAGGGCCGGCTTA +
Preference number: 2 (lower is better)
Translates to: TGMCTAPSAALILSQPSSFHLSE*WPRAGL
Trigger: TAAGCCGGCCCTGGGCCAGCACTCCGAGAGGTGGAA...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp TGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCGTGATCTCAAGGCTCTaGAAGTGTCCTTCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: WRACQWANPAQRSHPQEAVISRL*KCPSPR
Trigger: TCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCAC...GGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGCTGAAGGCCGCGGTCTaGCTGGGCTCAGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGLKAAV*LGSAGA
Trigger: AGCACCTGCTGAGCCCAGCCAGACCGCGGCCTTCAG...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCCACCTCTCGGAGTGCTaGCCCAGGGCCGGCTTAGCT +
Preference number: 2 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPHLSEC*PRAGLA
Trigger: AGCTAAGCCGGCCCTGGGCCAGCACTCCGAGAGGTG...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGGGCAGCGTGGTCTCCTaGGGAGAAGCCCCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGGSVVS*GEAPSA
Trigger: AGCACTGGGGGCTTCTCCCCAGGAGACCACGCTGCC...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR TCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGGACCTGCCAAACAGGTaGTCTCAAGGCTCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: ACQWANPAQRSHPQEASRDLPNR*SQGSAS
Trigger: ACTTGCAGAGCCTTGAGATCACCTGTTTGGCAGGTC...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR TCA 90 bp GGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATCACTGTCCTCCACACTaGGATGGATGCGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GHQHPSLSNGGLGVSERHHCPPH*DGCGPG
Trigger: ACCAGGGCCGCATCCATCTCAGTGTGGAGGACAGTG...ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCGGCAGGTGTGTGCCATaGGGGTCACTGCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPGRCVP*GSLLPL
Trigger: GAGAGGCAGCAGTGACCCCCATGGCACACACCTGCC...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTCTCTTGGAGGGCAGCGTaGTCTCCTGGGGAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: EQMGAKTQEDGEGPVTVLSWRAA*SPGEKP
Trigger: GGGCTTCTCCCCAGGAGACCACGCTGCCCTCCAAGA...GAGGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGGGCTGCTTAAGTAACTaGTATGTGCACAGCCCCCTC +
Preference number: 2 (lower is better)
Translates to: ACQWANPAQRSHPQEASRGCLSN*YVHSPL
Trigger: GAGGGGGCTGTGCACATACCAGTTACTTAAGCAGCC...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR TCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCAAACCACTGCAAAGCTaGAGAGGCCCCCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPKPLQS*RGPQGH
Trigger: GTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTT...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp AAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCATCTCCAGCTCACAGCTaGTCCTGGTCTTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: KFGHPAQSLSGHQHPSLSSPAHS*SWSWRA
Trigger: TGCCCTCCAAGACCAGGAGCAGCTGTGAGCTGGAGA...TGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGGTGTCCAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGGACTTACAGCTTTGTaGAAGGGGCCCACAAACCTT +
Preference number: 2 (lower is better)
Translates to: KEPHAASAPWRACQWANPGLTAL*KGPTNL
Trigger: AAGGTTTGTGGGCCCCTTCCACAAAGCTGTAAGTCC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTCTGGTCTCAACCCCTaGGAACCTAGTTTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSSGLNP*EPSFPG
Trigger: GCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGA...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCAGATGGATGCGGCCCTaGTGGGATCTGCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGRWMRP*WDLQGT
Trigger: TGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCT...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCATGCTTCTCTTCTCTTaGCTAAAGCTCAGAACAGCC +
Preference number: 2 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPMLLFS*LKLRTA
Trigger: GGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCAT...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp GTCACCTTTCTGGTCTCAACCCCTGGGAACCTAGTTTCCCAGGCCCAGGACACCCCCCAGTCCAGGACCTaGCAAACAGGTGATCTCAAG +
Preference number: 2 (lower is better)
Translates to: VTFLVSTPGNLVSQAQDTPQSRT*QTGDLK
Trigger: CTTGAGATCACCTGTTTGGCAGGTCCTGGACTGGGG...GGTGTCCTGGGCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGAAAGGTGAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATTCTTGGTCACCTTTCTaGTCTCAACCCCTGGGAACC +
Preference number: 2 (lower is better)
Translates to: GHQHPSLSNGGLGVSERHSWSPF*SQPLGT
Trigger: GGTTCCCAGGGGTTGAGACCAGAAAGGTGACCAAGA...ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGGCTCACAGCTGCTCCTaGTCTTGGAGGGCAGCGTGG +
Preference number: 2 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVAHSCS*SWRAAW
Trigger: CCACGCTGCCCTCCAAGACCAGGAGCAGCTGTGAGC...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCTCCAGGCACCCTCCCTaGAGTCCCCGCGGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: MARPLCYVISVLYLNEATSRHPP*SPRGQA
Trigger: AGCCTGGCCGCGGGGACTGCAGGGAGGGTGCCTGGA...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGCAAACCTTGGAGGTCTaGGTGTCCTTTGCTAATAAG +
Preference number: 2 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGQTLEV*VSFANK
Trigger: CTTATTAGCAAAGGACACCCAGACCTCCAAGGTTTG...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp CGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCACGGACCCTGGGGTCCCTCTaGTGTCTCCAGCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: RPLCYVISVLYLNEATPRTLGSL*CLQLTA
Trigger: AGCTGTGAGCTGGAGACAGCAGAGGGACCCCAGGGT...CCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCAGCTCAGGGAGCAAATaGGGGCCAAAACGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: GGDSNEQMFSSSLGAILISSGSK*GPKRKR
Trigger: CCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCT...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR GCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCTGTTGGCAGGTGTGTaGCATGGGGGTCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: MARPLCYVISVLYLNEATLLAGV*HGGHCC
Trigger: GCAGCAGTGACCCCCATGGCACACACCTGCCAACAG...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCGAGAGGCATTAGGATaGTCACTGACAGGCGCCAAC +
Preference number: 2 (lower is better)
Translates to: MARPLCYVISVLYLNEATREALG*SLTGAN
Trigger: GTTGGCGCCTGTCAGTGACCATCCTAATGCCTCTCG...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp GGCCAGGCTCCTGAGTGTGCCAGCAGAGCCGTCCCCTaGGACCACAGCCAAGTGCCTTCGGGCAGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: GQAPECASRAVP*DHSQVPSGSWP
Trigger: AGGCCAGCTGCCCGAAGGCACTTGGCTGTGGTCCCAGGGGACGGCTCTGCTGGCACACTCAGGAGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 72 bp CAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTaGCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: QCPMAGVSVGKP*PKVPPPRGLQD
Trigger: GTCCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 72 bp TCAATGAAGCAACCCCACGGGTCCAGGCACCCTCCCTaGAGTCCCCGCGGCCAGGCTCCTGAGTGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: SMKQPHGSRHPP*SPRGQAPECAS
Trigger: GCTGGCACACTCAGGAGCCTGGCCGCGGGGACTGCAGGGAGGGTGCCTGGACCCGTGGGGTTGCTTCATTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR TCA 72 bp CTGGGACCACAGCCAAGTGCCTTCGGGCAGCTGGCCTaGCACAGGCGGGGTCTGCTGGGTCTACAGGGTCCA +
Preference number: 3 (lower is better)
Translates to: LGPQPSAFGQLA*HRRGLLGLQGP
Trigger: TGGACCCTGTAGACCCAGCAGACCCCGCCTGTGTCAGGCCAGCTGCCCGAAGGCACTTGGCTGTGGTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp GGAGAAGCCCCCAGTGCTGTTGGCAGGTGTGTGCCATaGGGGTCACTGCTGCCTCTCAGGGTGGGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: GEAPSAVGRCVP*GSLLPLRVGSE
Trigger: CTCAGAGCCCACCCTGAGAGGCAGCAGTGACCCCCATGGCACACACCTGCCAACAGCACTGGGGGCTTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp CCGTCACTGTCCTCCACACTGAGATGGATGCGGCCCTaGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: PSLSSTLRWMRP*WDLQGTPWGPS
Trigger: AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAGTGTGGAGGACAGTGACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CAA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGGGGCCATTCTTATCTaGGAGCTCAGGGAGCAAATG +
Preference number: 3 (lower is better)
Translates to: PHAASAPWRACQWANPAQGAILI*ELREQM
Trigger: CATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 72 bp CTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATaGCCCTCTGGGAGGTATGTCTTCCCACAAACCACT +
Preference number: 3 (lower is better)
Translates to: LPDARVSPGGSP*PSGRYVFPQTT
Trigger: AGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp AAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTaGCAGTCCATGCCCCTCTGGGAGGTATGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: KCPSPRRQGQSW*QSMPLWEVCLP
Trigger: GGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp TGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTaGTGGCAGTCCATGCCCCTCTGGGAGGTATGTCTT +
Preference number: 3 (lower is better)
Translates to: CKCPSPRRQGQS*WQSMPLWEVCL
Trigger: AAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp TTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTaGGAAGCCCCAAGTTTGGACACCCTGCCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: LSQPSSVHTAGA*EAPSLDTLPSP
Trigger: GGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CAA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCAGGGGCCCACAAACCTaGGAGGTCTGGGTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSRGPQT*EVWVSF
Trigger: AAAGGACACCCAGACCTCCAAGGTTTGTGGGCCCCT...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 72 bp AGTCCAGGACCTGCCAAACAGGTGATCTCAAGGCTCTaGAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCC +
Preference number: 3 (lower is better)
Translates to: SPGPAKQVISRL*KCPSPRRQGQS
Trigger: GGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACCTGTTTGGCAGGTCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp CGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTaGGAGGTATGTCTTCCCACAAACCACTGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: RQGQSWWQSMPL*EVCLPTNHCKA
Trigger: AGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp GTCCCTGTCAGGGCACCAACACCCCTCCCTCTCAAATaGTGGCTTGGGAGTGAGCGAGAGGCATTAGGATGG +
Preference number: 3 (lower is better)
Translates to: VPVRAPTPLPLK*WLGSEREALGW
Trigger: CCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR TCA 72 bp CTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTaGAGAGGCCCCCAGGGGCACGGATGCAAGAGATGC +
Preference number: 3 (lower is better)
Translates to: LGGMSSHKPLQS*RGPQGHGCKRC
Trigger: GCATCTCTTGCATCCGTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR GCA 72 bp GGCCCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTaGAGGTGCCTGGGAAGCCCCAAGTTTGGACACCCT +
Preference number: 3 (lower is better)
Translates to: GPNLEPAKQCSH*RCLGSPKFGHP
Trigger: AGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp CCTGTCAGGGCACCAACACCCCTCCCTCTCAAATGGTaGCTTGGGAGTGAGCGAGAGGCATTAGGATGGTCA +
Preference number: 3 (lower is better)
Translates to: PVRAPTPLPLKW*LGSEREALGWS
Trigger: TGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCCTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CCA 72 bp AAATGGTGGCTTGGGAGTGAGCGAGAGGCATTAGGATaGTCACTGACAGGCGCCAACCTCTCCATAGCCCAG +
Preference number: 3 (lower is better)
Translates to: KWWLGSEREALG*SLTGANLSIAQ
Trigger: CTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGCCTCTCGCTCACTCCCAAGCCACCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CAA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCGATGCTTCTCTTCTCTaGCCTAAAGCTCAGAACAGC +
Preference number: 3 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSDASLL*PKAQNS
Trigger: GCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CAA 90 bp CGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCACGGTGGGAAGCCCCAAGTTaGGACACCCTGCCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: RPLCYVISVLYLNEATPRWEAPS*DTLPSP
Trigger: GGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCA...CCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR-3UTR CAA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCAGGGCACTCGGAGCCTaGAGTCTGCTGCAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: MARPLCYVISVLYLNEATRALGA*SLLQAQ
Trigger: CTGGGCCTGCAGCAGACTCAAGGCTCCGAGTGCCCT...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR TCA 72 bp TCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATaGAGCAACCCCACGGGTCCAGGCACCCTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: SFVLCDKCALSQ*SNPTGPGTLPA
Trigger: TGCAGGGAGGGTGCCTGGACCCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGGCCCCATGCAGCCAGTaGCCCATGGCGGGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWAPCSQ*PMAGVS
Trigger: TGACACGCCCGCCATGGGGCACTGGCTGCATGGGGC...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGCGTTCATGGACCCCGTaGTGCTCCGCGACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWRSWTP*CSATCG
Trigger: CCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACG...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAACTGGAGACGGCCTCCTaGAGGCAGTCGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQLETAS*RQSDGS
Trigger: GCTGCCGTCCGACTGCCTGCAGGAGGCCGTCTCCAG...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGCTGCTCCCCAGAGCTaGCAGGGCCCCTTCCACCTC +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQAAPQS*QGPFHL
Trigger: GAGGTGGAAGGGGCCCTGCCAGCTCTGGGGAGCAGC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGGGGCACTCGGAGCCTTaGGTCTGCTGCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWGHSEP*VCCRPS
Trigger: GCTGGGCCTGCAGCAGACTCAAGGCTCCGAGTGCCC...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGGCCGGGAAGACCCCTaGCAGGGATGTGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPGREDP*QGCVSP
Trigger: GGGGGACACACATCCCTGGCAGGGGTCTTCCCGGCC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGGGACCACAGCCAAGTaGCTTCGGGCAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQGTTAK*LRAAGL
Trigger: CAGGCCAGCTGCCCGAAGGCACTTGGCTGTGGTCCC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCAGCCGGCGGCACTGGTaGGCGTCCGAGAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPSRRHW*ASESSI
Trigger: GATGCTGCTCTCGGACGCCCACCAGTGCCGCCGGCT...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCAGGCCGCGGTCTGGCTaGGCTCAGCAGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPRPRSG*AQQVLL
Trigger: GAGGAGCACCTGCTGAGCCCAGCCAGACCGCGGCCT...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTGCAGCCAGTGCCCCATaGCGGGCGTGTCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSAASAP*RACQWA
Trigger: TGCCCACTGACACGCCCGCCATGGGGCACTGGCTGC...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTGTGGCCCGCCTTGCGTaGCCGGGCACAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSVARLA*PGTGAG
Trigger: ACCAGCCCCTGTGCCCGGCCACGCAAGGCGGGCCAC...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTCGCCAGGGTCAGTCCTaGTGGCAGTCCATGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSRQGQS*WQSMPL
Trigger: GAGGGGCATGGACTGCCACCAGGACTGACCCTGGCG...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGCCCAGCTCCACTGAGTaGCCACGAGCAACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWPSSTE*PRATVS
Trigger: GGACACAGTTGCTCGTGGCCACTCAGTGGAGCTGGG...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGAGCTGCTCCTGGTCTTaGAGGGCAGCGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWSCSWS*RAAWSP
Trigger: AGGAGACCACGCTGCCCTCCAAGACCAGGAGCAGCT...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGGGGCACAGGGGCTGGTaGCCACGCCATCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRGHRGW*PRHHSA
Trigger: TGCAGAATGATGGCGTGGTCACCAGCCCCTGTGCCC...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTAGGCCGAGGCGGCTGTaGATTCCGTGTCACCTCCCA +
Preference number: 4 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTRPRRL*IPCHLP
Trigger: TGGGAGGTGACACGGAATTCACAGCCGCCTCGGCCT...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCAAACCACTGCAAAGCTaGAGAGGCCCCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: WRACQWANPAQRSHPQEAKPLQS*RGPQGH
Trigger: GTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTT...GGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCCACTGTCCTCCACACTaGGATGGATGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: WRACQWANPAQRSHPQEAHCPPH*DGCGPG
Trigger: ACCAGGGCCGCATCCATCTCAGTGTGGAGGACAGTG...GGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGTGCCATGGGGGTCACTaGTGCCTCTCAGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRCHGGH*CLSGWA
Trigger: AGCCCACCCTGAGAGGCAGCAGTGACCCCCATGGCA...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTAGGGAGAAGCCCCCAGTaGTGTTGGCAGGTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVGRSPQ*CWQVCA
Trigger: GGCACACACCTGCCAACAGCACTGGGGGCTTCTCCC...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCGACACAGGCGGGGTCTaGTGGGTCTACAGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: WRACQWANPAQRSHPQEADTGGV*WVYRVQ
Trigger: TTGGACCCTGTAGACCCAGCAGACCCCGCCTGTGTC...GGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp TCCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGAGGATGAGTAGCGTGTaGCCCGCCTTGCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRCGRQARPRCDTEGRGLRMSSV*PALRGR
Trigger: CCGGCCACGCAAGGCGGGCCACACGCTACTCATCCT...CAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGGAGGGAAAGGATGTGTaGCAGTGCCGCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWEGKDV*QCRSPK
Trigger: TTTGGGGCTGCGGCACTGCCACACATCCTTTCCCTC...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTACCCGCACCAAGGCATaGGGGACACTCGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPTRTKA*GTLVAA
Trigger: AGCAGCCACGAGTGTCCCCCATGCCTTGGTGCGGGT...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTGGCGGGCGTGTCAGTaGGCAAACCCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPWRACQ*ANPAQR
Trigger: CCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTCGCCAGCACGGCACGGTaGCAGGGGAAGGCACGGTCG +
Preference number: 4 (lower is better)
Translates to: EQMGAKTQEDGEGPVTVLASTAR*QGKARS
Trigger: CGACCGTGCCTTCCCCTGTCACCGTGCCGTGCTGGC...GAGGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGGTCGGCCTTGGGGATaGTCTCCTTGGCCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPGRPWG*SPWPCG
Trigger: ACCACAAGGCCAAGGAGATCATCCCCAAGGCCGACC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGCCGCGGCCAGGCTCCTaGGTGTGCCAGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGPRPGS*VCQQSR
Trigger: ACGGCTCTGCTGGCACACTCAGGAGCCTGGCCGCGG...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAACTCACCGTCTCAAAGTaGACCAGGCACATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQLTVSK*TRHMRQ
Trigger: CTGGCGCATGTGCCTGGTGCACTTTGAGACGGTGAG...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTGGGCATGGCAGGACATaGGCTTGGCAGTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTGHGRT*AWQSCP
Trigger: GGGACATGACTGCCAAGCGCATGTCCTGCCATGCCC...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCGCTGGGCTCAGCAGGTaGTCCTCACGCGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSAGLSR*SSRGQV
Trigger: CACCTGCCCGCGTGAGGAGCACCTGCTGAGCCCAGC...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCCTGTTGGCAGGTGTGTaGCATGGGGGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPLLAGV*HGGHCC
Trigger: GCAGCAGTGACCCCCATGGCACACACCTGCCAACAG...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGGGTGGGAGGCCTTGTaGAAGAGGGTGACGTTCATG +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQGWEAL*KRVTFM
Trigger: CATGAACGTCACCCTCTTCCACAAGGCCTCCCACCC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTTACAGCCGGCGGCACTaGTGGGCGTCCGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSYSRRH*WASESS
Trigger: GCTGCTCTCGGACGCCCACCAGTGCCGCCGGCTGTA...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGTCACCCACTGGAGGATaGCCTCGAAGACCACCCGCT +
Preference number: 4 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWSPTGG*PRRPPA
Trigger: AGCGGGTGGTCTTCGAGGCCATCCTCCAGTGGGTGA...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCCCCATGATGAAGATCTaGCTGCCCAGGACGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPPMMKI*LPRTAA
Trigger: CGCTGCCGTCCTGGGCAGCCAGATCTTCATCATGGG...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTAGATGGATGCGGCCCTaGTGGGATCTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTRWMRP*WDLQGT
Trigger: TGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCT...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTCGTGGAGCTCAGGGAGCAAATaGGGGCCAAAACGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTPKRPPGPAPRHGGHSWSSGSK*GPKRKR
Trigger: CCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCT...CCACGAGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAACACACTGCAGGTGCCTaGGAAGCCCCAAGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQHTAGA*EAPSLD
Trigger: GTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTG...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGCAGCGTTCTCCTCGTTaGTGGCGATGCGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRQRSPR*WRCVRS
Trigger: ACTCCTCACGCATCGCCATCAACGAGGAGAACGCTG...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TCCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGCCTGCCTCCAGCAGTaGCTCAGCGTTCTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SRCGRQARPRCDTEGRGLACLQQ*LSVLLV
Trigger: AACGAGGAGAACGCTGAGTCACTGCTGGAGGCAGGC...CAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGCTCATCACTCGAGATaGGGTCCAGCAGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQAHHSR*GPAVCP
Trigger: AGGACACACTGCTGGACCTCATCTCGAGTGATGAGC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATTGCGCTCGTCTGCCATaGGGAGGGCCTCGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GHQHPSLSNGGLGVSERHCARLP*GGPRWR
Trigger: TCTCCAGCGAGGCCCTCCTCATGGCAGACGAGCGCA...ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGCCACTGCGGCATTGCTaGCGCCATCCCGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGPLRHC*RHPARG
Trigger: CCCCCTTGCGGGATGGCGTCAGCAATGCCGCAGTGG...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATGGGGGCACTCGGCCTTaGTCGTCCACCTGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GHQHPSLSNGGLGVSERHGGTRP*SSTCSP
Trigger: CGGAGAACAGGTGGACGATCAAGGCCGAGTGCCCCC...ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGGGCCGTGGGGATAAGTaGGTAGGGCACTGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRGRGDK*VGHCGD
Trigger: ATCACCACAGTGCCCTACTCACTTATCCCCACGGCC...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGTCCAGCACCTCCGGGTaGAGGTTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWSSTSG*RLSWKL
Trigger: CAACTTCCAGGACAACCTGCACCCGGAGGTGCTGGA...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTCCACATAGAGCTTGTTaGCGGAAGCCAGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSPHRAC*RKPGHG
Trigger: GCCATGCCCTGGCTTCCGGCAACAAGCTCTATGTGG...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCACAGCCCAAGGCTGCTaGTCCCCAGAGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSTAQGC*SPELAG
Trigger: CCCTGCCAGCTCTGGGGAGCAGCAGCCTTGGGCTGT...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTAAAGCAGTGTTCACACTaGAGGTGCCTGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVKQCSH*RCLGSP
Trigger: GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTT...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCTCCAGGCACCCTCCCTaGAGTCCCCGCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGSRHPP*SPRGQA
Trigger: AGCCTGGCCGCGGGGACTGCAGGGAGGGTGCCTGGA...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGCATTCTGCAGGATCCTaGTCTTGCAGCGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWHSAGS*SCSAGP
Trigger: AGGCCCTGCGCTGCAAGACCAGGATCCTGCAGAATG...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTAGCTCAGCTGAGCCATaGCCAAAGCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTSSAEP*PKRAIS
Trigger: GCTGATTGCCCGCTTTGGCCATGGCTCAGCTGAGCT...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTAGTTGATGGCGATGCGTaGGGAGTAGGCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVVDGDA*GVGKVQ
Trigger: CTGGACTTTGCCTACTCCTCACGCATCGCCATCAAC...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTTCCACCTCTCGGAGTaGTGGCCCAGGGCCGGCTTA +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSFHLSE*WPRAGL
Trigger: TAAGCCGGCCCTGGGCCAGCACTCCGAGAGGTGGAA...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTAGACTTGCGGGTCTCATaGACACTGACCGACATGGTG +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVDLRVS*TLTDMV
Trigger: CACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTC...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCCGAAGCGTGTTGAGGTaGGCCAGCACACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSRSVLR*ASTQSG
Trigger: CCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCG...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTAGGAGCTCGGGCAAGTaGACCTTCCGTGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSRSSGK*TFRGSR
Trigger: CCTGGAGCCACGGAAGGTCCACTTGCCCGAGCTCCT...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCCCGGAAGCCAGGGCATaGCAGGACATGCGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSPEARA*QDMRLA
Trigger: TGCCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGG...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGCACCTCTCGGAGTGCTaGCCCAGGGCCGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGHLSEC*PRAGLA
Trigger: AGCTAAGCCGGCCCTGGGCCAGCACTCCGAGAGGTG...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCGGCAGGTGTGTGCCATaGGGGTCACTGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSGRCVP*GSLLPL
Trigger: GAGAGGCAGCAGTGACCCCCATGGCACACACCTGCC...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTACGAGAGGCATTAGGATaGTCACTGACAGGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVREALG*SLTGAN
Trigger: GTTGGCGCCTGTCAGTGACCATCCTAATGCCTCTCG...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCCTCCCTCTCAAATGGTaGCTTGGGAGTGAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPLPLKW*LGSERE
Trigger: CTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAG...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp AAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCAGCTTGCGAAGCGTGTTaGGGTGGGCCAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: KFGHPAQSLSGHQHPSLSACEAC*GGPAHS
Trigger: ACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGC...TGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGGTGTCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCCGATCGCTGAGGCGCTaGACTCCTTCCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPRSLRR*TPSGGW
Trigger: CCAGCCCCCGGAAGGAGTTCAGCGCCTCAGCGATCG...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCCTTGCAGCCGATCGCTaGGGCGCTGAACTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPLAADR*GAELLP
Trigger: CGGAAGGAGTTCAGCGCCTCAGCGATCGGCTGCAAG...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GTCACCTTTCTGGTCTCAACCCCTGGGAACCTAGTTTCCCAGGCCCAGGACACCCAGGCCCAGCTCCACTaGGTGGCCACGAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: VTFLVSTPGNLVSQAQDTQAQLH*VATSNC
Trigger: ACAGTTGCTCGTGGCCACTCAGTGGAGCTGGGCCTG...GGTGTCCTGGGCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGAAAGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTATTGAAGTCCTCGCTCTaGCTCACCGTCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVLKSSL*LTVSKC
Trigger: GCACTTTGAGACGGTGAGGCAGAGCGAGGACTTCAA...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCGCAGGATCCTGGTCTTaGAGCGCAGGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSAGSWS*SAGPHP
Trigger: TGGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGC...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTACCACGCCATCATTCTaGAGGATCCTGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPTTPSF*RILVLQ
Trigger: CTGCAAGACCAGGATCCTGCAGAATGATGGCGTGGT...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTCCGTCACATAGACCTTaGAGCCGATCGCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSPSHRP*SRSLRR
Trigger: GCGCCTCAGCGATCGGCTGCAAGGTCTATGTGACGG...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGTGATCTCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGCCTCACGCGGGCAGGTaGTTCCAGGTGCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: GDLKALQVSFSPTPGSVLPHAGR*FQVLTK
Trigger: CTTTGTCAGCACCTGGAAGCACCTGCCCGCGTGAGG...CAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp AAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCAAAGGATGTGTGGCAGTaGCGCAGCCCCAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KFGHPAQSLSGHQHPSLSKDVWQ*RSPKAH
Trigger: GTGGGCTTTGGGGCTGCGGCACTGCCACACATCCTT...TGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGGTGTCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTACCCTGGGGTCCCTCTaGTGTCTCCAGCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSTLGSL*CLQLTA
Trigger: AGCTGTGAGCTGGAGACAGCAGAGGGACCCCAGGGT...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTAGCACACAGTCCGGGTaGGAGGCCTTGTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSSTQSG*EALWKR
Trigger: CCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCT...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTAGGGTGCAGGTTGTCCTaGAAGTTGACAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVGCRLS*KLTVSS
Trigger: GGATGACACTGTCAACTTCCAGGACAACCTGCACCC...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAGGACTTACAGCTTTGTaGAAGGGGCCCACAAACCTT +
Preference number: 4 (lower is better)
Translates to: PHAASAPWRACQWANPAQGLTAL*KGPTNL
Trigger: AAGGTTTGTGGGCCCCTTCCACAAAGCTGTAAGTCC...TTGGGCAGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCGGCAGCGTGGTCTCCTaGGGAGAAGCCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGGSVVS*GEAPSA
Trigger: AGCACTGGGGGCTTCTCCCCAGGAGACCACGCTGCC...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCGGGAAGCCCCAAGTTTaGACACCCTGCCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSGKPQV*TPCPVP
Trigger: AGGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCC...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCGTGCCTTCGGGCAGCTaGCCTGACACAGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPVPSGS*PDTGGV
Trigger: GACCCCGCCTGTGTCAGGCCAGCTGCCCGAAGGCAC...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CAA 72 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTaGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALI*SQPSSVHTAGA
Trigger: GGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GGTGATCTCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGGGTCTCATGGACACTaGCCGACATGGTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: GDLKALQVSFSPTPGSVLGSHGH*PTWCVS
Trigger: ACTGACGCACCATGTCGGTCAGTGTCCATGAGACCC...CAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCGCAGTTCCATGTATCTaGAGTGGGGTCATAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPAVPCI*SGVIAV
Trigger: GACTGCTATGACCCCACTTCAGATACATGGAACTGC...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGGGGCACGGATGTCATGGACCCCGTGCTaGTCCGCGACTTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: YVFPQTTAKLKRPPGARMSWTPC*SATCGS
Trigger: AGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGA...CATCCGTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCACTTGGTGCGCTCGTCTaGCATGAGGAGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPLGALV*HEEGLA
Trigger: AGCGAGGCCCTCCTCATGGCAGACGAGCGCACCAAG...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTTGTCCCGGTGGATGCTaGTTCCTCCGAAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSCPGGC*FLRKQR
Trigger: TCTTTGTTTTCGGAGGAACCAGCATCCACCGGGACA...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGCACCAACACCCCTCCCTCTCAAATGGTGGCTTGGGAGTGAGCGAGAGGCATGGCAGGACATGCGCTTaGCAGTCATGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: GHQHPSLSNGGLGVSERHGRTCA*QSCPQS
Trigger: GGATTGGGGACATGACTGCCAAGCGCATGTCCTGCC...ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGGTGTTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGCTCACAGCTGCTCCTaGTCTTGGAGGGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPAHSCS*SWRAAW
Trigger: CCACGCTGCCCTCCAAGACCAGGAGCAGCTGTGAGC...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ATGCCCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCTGGATGCGGCCCTGGTaGGATCTGCAGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: MPLWEVCLPTNHCKAEEAWMRPW*DLQGTP
Trigger: GGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCA...GGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGGGCCATTCTTATCTTaGAGCTCAGGGAGCAAATGG +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPGPFLS*SSGSKW
Trigger: CCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCCCCCTCCCTCTCAAATaGTGGCTTGGGAGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSPLPLK*WLGSER
Trigger: TCGCTCACTCCCAAGCCACCATTTGAGAGGGAGGGG...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGTTGGGGAAAGCACCATaGCACGTCCTTTGTGCTATG +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRLGKAP*HVLCAM
Trigger: CATAGCACAAAGGACGTGCCATGGTGCTTTCCCCAA...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCACCTTGTGGAAGAGGGTaGCGTTCATGGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPPCGRG*RSWTPC
Trigger: GCACGGGGTCCATGAACGTCACCCTCTTCCACAAGG...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp GGTGATCTCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGATGGTGGCTTGGGAGTaGGCGAGAGGCATTAGGATG +
Preference number: 4 (lower is better)
Translates to: GDLKALQVSFSPTPGSVLMVAWE*ARGIRM
Trigger: CATCCTAATGCCTCTCGCTCACTCCCAAGCCACCAT...CAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCCATGGGGGTCACTGCTaGCTCTCAGGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPHGGHC*LSGWAL
Trigger: CAGAGCCCACCCTGAGAGGCAGCAGTGACCCCCATG...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCAGAGCTGGCTCGTGCTTCACCCACTaGAGGATGGCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: LLLPKAQNSPRLLLPRAGSCFTH*RMASKT
Trigger: GGTCTTCGAGGCCATCCTCCAGTGGGTGAAGCACGA...GCCAGCTCTGGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp TATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGGGGCACGGATGGCATGGGCGCCGCCTTaGACCATTCCTCATGTACGG +
Preference number: 4 (lower is better)
Translates to: YVFPQTTAKLKRPPGARMAWAPP*TIPHVR
Trigger: CCGTACATGAGGAATGGTCCAAGGCGGCGCCCATGC...CATCCGTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAAGCGGGCAATCAGCATaGGCGCCGCCTTGGACCATT +
Preference number: 4 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPSGQSA*APPWTI
Trigger: AATGGTCCAAGGCGGCGCCCATGCTGATTGCCCGCT...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTGACACCATGTCCCGGTaGATGCTGGTTCCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSDTMSR*MLVPPK
Trigger: TTTCGGAGGAACCAGCATCCACCGGGACATGGTGTC...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTCATAGCACTGGACCTTaGACACCATGTCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGMCTAPSAALILSQPSSHSTGP*TPCPGG
Trigger: TCCACCGGGACATGGTGTCCAAGGTCCAGTGCTATG...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCGTGTACCGCCAAGGCTaGGGGCACTCGGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPVYRQG*GHSALI
Trigger: GATCAAGGCCGAGTGCCCCCAGCCTTGGCGGTACAC...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGTCCATGTATCTGAAGTaGGGTCATAGCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ACQWANPAQRSHPQEASRSMYLK*GHSSPE
Trigger: CTCTGGACTGCTATGACCCCACTTCAGATACATGGA...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTAAGCAACACAACTTTTaGGGAAAGCACCATGGCACG +
Preference number: 4 (lower is better)
Translates to: KEPHAASAPWRACQWANPKQHNF*GKHHGT
Trigger: CGTGCCATGGTGCTTTCCCCAAAAGTTGTGTTGCTT...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGTGATCTCAAGGCTCTGCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGAGTGCACCAGGCACATaGGCCAGGAGAACTCATACA +
Preference number: 4 (lower is better)
Translates to: GDLKALQVSFSPTPGSVLSAPGT*ARRTHT
Trigger: TGTATGAGTTCTCCTGGCGCATGTGCCTGGTGCACT...CAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp AAGTTTGGACACCCTGCCCAGTCCCTGTCAGGGCACCAACACCCCTCCCTCTCATCTTGGTCACCTTTCTaGTCTCAACCCCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: KFGHPAQSLSGHQHPSLSSWSPF*SQPLGT
Trigger: GGTTCCCAGGGGTTGAGACCAGAAAGGTGACCAAGA...TGAGAGGGAGGGGTGTTGGTGCCCTGACAGGGACTGGGCAGGGTGTCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp ATGCCCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCAACGCAAGAGGATGGTaGGGGTCCCGTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: MPLWEVCLPTNHCKAEEANARGW*GSRHCP
Trigger: AGGACAGTGACGGGACCCTCACCATCCTCTTGCGTT...GGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCTGTTCACACTGCAGGTaGCTGGGAAGCCCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPCSHCR*LGSPKF
Trigger: AAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACA...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCCAAAGAGCTTCAGCTTaGCACTCACCACTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPQRASA*HSPLRH
Trigger: ATGCCGCAGTGGTGAGTGCCAAGCTGAAGCTCTTTG...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCTCTGGTCTCAACCCCTaGGAACCTAGTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGSGLNP*EPSFPG
Trigger: GCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGA...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CAA 72 bp CCCAGGGGCACGGATGCAAGAGATGCTTCTCTTCTCTaGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRGTDARDASLL*PKAQNSPRLLL
Trigger: GAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATCTCTTGCATCCGTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGCGCACATCGTGGAACTaGAGCATGTCGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVRTSWN*SMSPAS
Trigger: GGAGGCAGGCGACATGCTGCAGTTCCACGATGTGCG...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGGGGGACACTCGTGGCTaGTTAAGTAACTGGTATGTG +
Preference number: 4 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGGDTRG*LSNWYV
Trigger: CACATACCAGTTACTTAAGCAGCCACGAGTGTCCCC...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGTCAGTGGGCAAACCCTaGCCAAAGGTCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVSVGKP*PKVPPP
Trigger: TGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGA...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ATGCCCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCTCCGCGTCCACTGGTTaGTCTCACAGTCAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: MPLWEVCLPTNHCKAEEASASTG*SHSQSG
Trigger: ACCGCTTTGACTGTGAGACCAACCAGTGGACGCGGA...GGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCAAGGCCCTGAGTAGGTaGGCTGGGACTTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGKALSR*AGTYSF
Trigger: AAAGCTGTAAGTCCCAGCCCACCTACTCAGGGCCTT...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGGCTGCTTAAGTAACTaGTATGTGCACAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPGCLSN*YVHSPL
Trigger: GAGGGGGCTGTGCACATACCAGTTACTTAAGCAGCC...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGGGGCACGGATGTGTGCTTTATCTCAATaGAGCAACCCCACGGGTCCA +
Preference number: 4 (lower is better)
Translates to: YVFPQTTAKLKRPPGARMCALSQ*SNPTGP
Trigger: TGGACCCGTGGGGTTGCTTCATTGAGATAAAGCACA...CATCCGTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCCCATGTCCCGGTGGATaGTGGTTCCTCCGAAAACAA +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPPCPGG*WFLRKQ
Trigger: TTGTTTTCGGAGGAACCAGCATCCACCGGGACATGG...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCGTGATCTCAAGGCTCTaGAAGTGTCCTTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPVISRL*KCPSPR
Trigger: TCGGGGAGAAGGACACTTGCAGAGCCTTGAGATCAC...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCTCTTGGAGGGCAGCGTaGTCTCCTGGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GGDSNEQMFSSSLGAILISWRAA*SPGEKP
Trigger: GGGCTTCTCCCCAGGAGACCACGCTGCCCTCCAAGA...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCAGCAGAGCCGTCCCCTaGGACCACAGCCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGDSNEQMFSSSLGAILISRAVP*DHSQVP
Trigger: AGGCACTTGGCTGTGGTCCCAGGGGACGGCTCTGCT...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCCGTGGCTCCAGGTCGTaGTTCACCCACTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GGDSNEQMFSSSLGAILIRGSRS*FTHWRM
Trigger: CATCCTCCAGTGGGTGAAGCACGACCTGGAGCCACG...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCACGGCGTTCTCGGAGCCCCTaGCCCCCGTCACATAGACCT +
Preference number: 4 (lower is better)
Translates to: RPLCYVISVLYLNEATPRRSRSP*PPSHRP
Trigger: AGGTCTATGTGACGGGGGGCAGGGGCTCCGAGAACG...CCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGCCCCAGTCCAGGACCTaGCAAACAGGTGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVPQSRT*QTGDLK
Trigger: CTTGAGATCACCTGTTTGGCAGGTCCTGGACTGGGG...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCCCATCATCCACTTGTTaGCCCCAGGGTCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPPSSTC*PQGRIS
Trigger: AGAAATACGACCCTGGGGCCAACAAGTGGATGATGG...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCCAAACCTTGGAGGTCTaGGTGTCCTTTGCTAATAAG +
Preference number: 4 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPQTLEV*VSFANK
Trigger: CTTATTAGCAAAGGACACCCAGACCTCCAAGGTTTG...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCACAGGCGGGGTCTGCTaGGTCTACAGGGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GGDSNEQMFSSSLGAILITGGVC*VYRVQG
Trigger: TCCTTGGACCCTGTAGACCCAGCAGACCCCGCCTGT...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGGACCTGCCAAACAGGTaGTCTCAAGGCTCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVDLPNR*SQGSAS
Trigger: ACTTGCAGAGCCTTGAGATCACCTGTTTGGCAGGTC...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp CGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCACGGCCCGAAGGCCATGGCTaGACATGGCCTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: RPLCYVISVLYLNEATPRPEGHG*TWPQNS
Trigger: GCTATTTTGAGGCCATGTTCAGCCATGGCCTTCGGG...CCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp CGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCACGGTCGGTGAACATGCAGTaGTTGCGAAGCGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RPLCYVISVLYLNEATPRSVNMQ*LRSVLR
Trigger: CCTCAACACGCTTCGCAAGCACTGCATGTTCACCGA...CCGTGGGGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCGGGGCCCACAAACCTTaGAGGTCTGGGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: MARPLCYVISVLYLNEATGAHKP*RSGCPL
Trigger: CAAAGGACACCCAGACCTCCAAGGTTTGTGGGCCCC...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR GCA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCATGCTTCTCTTCTCTTaGCTAAAGCTCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: GGDSNEQMFSSSLGAILIMLLFS*LKLRTA
Trigger: GGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCAT...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCCCAATCCGCGTCCACTaGTTGGTCTCACAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: MARPLCYVISVLYLNEATPIRVH*LVSQSK
Trigger: CTTTGACTGTGAGACCAACCAGTGGACGCGGATTGG...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR TCA 90 bp ATGGCACGTCCTTTGTGCTATGTGATAAGTGTGCTTTATCTCAATGAAGCAACCAGTAGGGCACTGTGGTaGTGCAGTTCCATGTATCTG +
Preference number: 4 (lower is better)
Translates to: MARPLCYVISVLYLNEATSRALW*CSSMYL
Trigger: CAGATACATGGAACTGCATCACCACAGTGCCCTACT...GGTTGCTTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
3UTR CAA 72 bp AACACAACTTTTGGGGAAAGCACCATGGCACGTCCTTaGTGCTATGTGATAAGTGTGCTTTATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: NTTFGESTMARP*CYVISVLYLNE
Trigger: TTCATTGAGATAAAGCACACTTATCACATAGCACAAAGGACGTGCCATGGTGCTTTCCCCAAAAGTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp GGGCGCAGACGTGAGGATGCCCGTGGCCAGCTCCCCAGAGGCGCCTaGAGGCAGGCGGCACACTCAGGGCTCAAGTCCTGCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GRRREDARGQLPRGA*RQAAHSGLKSCSSP
Trigger: AGGGCTGGAGCAGGACTTGAGCCCTGAGTGTGCCGCCTGCCTGCAGGCGCCTCTGGGGAGCTGGCCACGGGCATCCTCACGTCTGCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CGCGACTTGCGGGTCTCATGGACACTGACCGACATGGTGCGTCAGTaGCGGAGACGATCCCCGCCGCCGCCGCCGCCTCAGAGACCACTC +
Preference number: 5 (lower is better)
Translates to: RDLRVSWTLTDMVRQ*RRRSPPPPPPQRPL
Trigger: GAGTGGTCTCTGAGGCGGCGGCGGCGGCGGGGATCGTCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp TGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTTaGCGGAGACGATCCCCGCCGCCGCCGCCGCCTCAGAGACCACTC +
Preference number: 5 (lower is better)
Translates to: CGRQARPRCDTEGRG*RRRSPPPPPPQRPL
Trigger: GAGTGGTCTCTGAGGCGGCGGCGGCGGCGGGGATCGTCTCCGGCAACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559131.1
CDS TCA 90 bp TCATGGACCCCGTGCTGCTCCGCGACTTGCGGGTCTCATGGACACTaGCCGACATGGTGCGTCAGTGCCGGAGACGATCCCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SWTPCCSATCGSHGH*PTWCVSAGDDPRRR
Trigger: GCGGCGGCGGGGATCGTCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 90 bp CCGCAGTGGCCGCCTGAGCAGCGAGAGCTCTGCTTGCAGCCACTGTaGCTCCATTTCCTGGTGACCCAGGGAAGGCCAGGCATGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PQWPPEQRELCLQPL*LHFLVTQGRPGMPG
Trigger: CCCGGGCATGCCTGGCCTTCCCTGGGTCACCAGGAAATGGAGCCACAGTGGCTGCAAGCAGAGCTCTCGCTGCTCAGGCGGCCACTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTCTGGGCAGGTCGGCCTaGGGGATGATCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSLGRSA*GMISLA
Trigger: GGCCAAGGAGATCATCCCCAAGGCCGACCTGCCCAG...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTACAGCTGCTCCTGGTCTaGGAGGGCAGCGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVQLLLV*EGSVVS
Trigger: GGAGACCACGCTGCCCTCCAAGACCAGGAGCAGCTG...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp GGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTGGAAGAGGGTaGCGTTCATGGACCCCGTGCTGCTCCGCGACTTGCGGGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GGPAHSPGGRPCGRG*RSWTPCCSATCGSH
Trigger: ATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp AGCAGCGAGAGCTCTGCTTGCAGCCACTGTGGCTCCATTTCCTGGTaGCCCAGGGAAGGCCAGGCATGCCCGGGCAGCGGCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSESSACSHCGSISW*PREGQACPGSGFWA
Trigger: AGCCCAGAAGCCGCTGCCCGGGCATGCCTGGCCTTCCCTGGGTCACCAGGAAATGGAGCCACAGTGGCTGCAAGCAGAGCTCTCGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp GTGACCCAGGGAAGGCCAGGCATGCCCGGGCAGCGGCTTCTGGGCTaGAGGCCCTTCTATGGAGAGCCCAGCTCACTCCCTGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: VTQGRPGMPGQRLLG*RPFYGEPSSLPAFE
Trigger: TTCAAAGGCAGGGAGTGAGCTGGGCTCTCCATAGAAGGGCCTGCAGCCCAGAAGCCGCTGCCCGGGCATGCCTGGCCTTCCCTGGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CGGGCCCAGGCACTGCCAGACGACATTCTAGGTGGCAGACGACGATaGGCTGGTTGGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RAQALPDDILGGRRR*AGWGCRQPSSVGSA
Trigger: GGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGCCTGGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCCGAGGCGGCTGTGAATTCCGTGTCACCTCCCATGATGAAGATCTaGCTGCCCAGGACGGCAGCGGCTGTGTACCGCCAAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AEAAVNSVSPPMMKI*LPRTAAAVYRQGWG
Trigger: CCCCCAGCCTTGGCGGTACACAGCCGCTGCCGTCCTGGGCAGCCAGATCTTCATCATGGGAGGTGACACGGAATTCACAGCCGCCTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CTGAGATGGATGCGGCCCTGGTGGGATCTGCAGGGGACACCCTGGGGTCCCTCTGTGCTGCTCCGCGACTaGCGGGTCTCATGGACACTG +
Preference number: 5 (lower is better)
Translates to: LRWMRPWWDLQGTPWGPSVLLRD*RVSWTL
Trigger: CAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCAC...AGAGGGACCCCAGGGTGTCCCCTGCAGATCCCACCAGGGCCGCATCCATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCAGCGTGTGGCCCGCCTaGCGTGGCCGGGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGSVWPA*RGRAQG
Trigger: CCCCTGTGCCCGGCCACGCAAGGCGGGCCACACGCT...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCCTCACCACTGCGGCATaGCTGACGCCATCCCGCAAG +
Preference number: 5 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPLTTAA*LTPSRK
Trigger: CTTGCGGGATGGCGTCAGCAATGCCGCAGTGGTGAG...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGAAGCCCCCAGTGCTGTaGGCAGGTGTGTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWKPPVL*AGVCHG
Trigger: CCCATGGCACACACCTGCCAACAGCACTGGGGGCTT...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp AAGGCACGGTCGCCCGCCCAGAGTGTGACGTCGGTGAACATGCAGTaGTTGCGAAGCGTGTTGAGGTGGGCCAGCACACAGTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: KARSPAQSVTSVNMQ*LRSVLRWASTQSGW
Trigger: CCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACTCTGGGCGGGCGACCGTGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp CTTGCAGCGCAGGGCCTCATCCATGATAAGCTTGGTGCGCTCGTCTaGCATGAGGAGGGCCTCGCTGGAGACGGCCTCCTGCAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LAAQGLIHDKLGALV*HEEGLAGDGLLQAV
Trigger: GACTGCCTGCAGGAGGCCGTCTCCAGCGAGGCCCTCCTCATGGCAGACGAGCGCACCAAGCTTATCATGGATGAGGCCCTGCGCTGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp TCAGCCCTGACAGCTCCGCAGTGGCCGCCTGAGCAGCGAGAGCTCTaGTTGCAGCCACTGTGGCTCCATTTCCTGGTGACCCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SALTAPQWPPEQREL*LQPLWLHFLVTQGR
Trigger: CCTTCCCTGGGTCACCAGGAAATGGAGCCACAGTGGCTGCAAGCAGAGCTCTCGCTGCTCAGGCGGCCACTGCGGAGCTGTCAGGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GTGACGTTCATGGACCCCGTGCTGCTCCGCGACTTGCGGGTCTCATaGACACTGACCGACATGGTGCGTCAGTGCCGGAGACGATCCCCG +
Preference number: 5 (lower is better)
Translates to: VTFMDPVLLRDLRVS*TLTDMVRQCRRRSP
Trigger: CGGGGATCGTCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 90 bp AGCGTGTTGAGGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTaGAAGAGGGTGACGTTCATGGACCCCGTGCTGCTCCGCGACTTG +
Preference number: 5 (lower is better)
Translates to: SVLRWASTQSGWEAL*KRVTFMDPVLLRDL
Trigger: CAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 90 bp AGCCGCTGGCTGCTATCCCCTAGGCTGTGGATCCAACCGCAACACTaGAGCAAGGGGCTGCCCTGGAGGTCGCTCAGGTTCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SRWLLSPRLWIQPQH*SKGLPWRSLRFQLS
Trigger: GCTGAGCTGGAACCTGAGCGACCTCCAGGGCAGCCCCTTGCTCCAGTGTTGCGGTTGGATCCACAGCCTAGGGGATAGCAGCCAGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGTCCGGGTGGGAGGCCTaGTGGAAGAGGGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: SRCGRQARPRCDTEGRGLSGWEA*WKRVTF
Trigger: GAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGA...CAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TGGCGGGCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCGCCACCATCATCCACTaGTTGGCCCCAGGGTCGTAT +
Preference number: 5 (lower is better)
Translates to: WRACQWANPAQRSHPQEAATIIH*LAPGSY
Trigger: ATACGACCCTGGGGCCAACAAGTGGATGATGGTGGC...GGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGCCCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp GCCTTGCGTGGCCGGGCACAGGGGCTGGTGACCACGCCATCATTCTaGAGGATCCTGGTCTTGCAGCGCAGGGCCTCATCCATGATAAGC +
Preference number: 5 (lower is better)
Translates to: ALRGRAQGLVTTPSF*RILVLQRRASSMIS
Trigger: GCTTATCATGGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGCAGAATGATGGCGTGGTCACCAGCCCCTGTGCCCGGCCACGCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp CCAGACGACATTCTAGGTGGCAGACGACGATGCGCTGGTTGGGGCTaGAGGCAGCCAAGCTCAGTGGGAAGTGCCATGGTCACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PDDILGGRRRCAGWG*RQPSSVGSAMVTRG
Trigger: GCCCCTGGTGACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CAGTGCTTGCGAAGCGTGTTGAGGTGGGCCAGCACACAGTCCGGGTaGGAGGCCTTGTGGAAGAGGGTGACGTTCATGGACCCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: QCLRSVLRWASTQSG*EALWKRVTFMDPVL
Trigger: CAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 90 bp ACAGAAGCCATCTCGGGCCCAGGCACTGCCAGACGACATTCTAGGTaGCAGACGACGATGCGCTGGTTGGGGCTGCAGGCAGCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TEAISGPGTARRHSR*QTTMRWLGLQAAKL
Trigger: GAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGCCTGGGCCCGAGATGGCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCTGGACTTCTCACCAGCATCCTTGGCCTGATCCCCACTGCTGCCTaGGAGAGTAGCGTCAGGGAGGGAAACGTAGGGAGCGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLLTSILGLIPTAA*ESSVREGNVGSGVV
Trigger: GACCACCCCGCTCCCTACGTTTCCCTCCCTGACGCTACTCTCCCAGGCAGCAGTGGGGATCAGGCCAAGGATGCTGGTGAGAAGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CCTAGGCTGTGGATCCAACCGCAACACTGGAGCAAGGGGCTGCCCTaGAGGTCGCTCAGGTTCCAGCTCAGCAATTCCCCGCCGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PRLWIQPQHWSKGLP*RSLRFQLSNSPPLL
Trigger: CAGAAGCGGCGGGGAATTGCTGAGCTGGAACCTGAGCGACCTCCAGGGCAGCCCCTTGCTCCAGTGTTGCGGTTGGATCCACAGCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CCTGCACTTCCTGTGTGCAGCAGGTCTTGGCCAACGTGCATCCTGTaGGTTGTTGGTGTAGGGCCTGCCCCACTAGGCTCAGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PALPVCSRSWPTCIL*VVGVGPAPLGSACP
Trigger: GGGGCAGGCTGAGCCTAGTGGGGCAGGCCCTACACCAACAACCCACAGGATGCACGTTGGCCAAGACCTGCTGCACACAGGAAGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp CCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGGTCAGCGTTCTCCTCGTaGATGGCGATGCGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: PAVADKQGHAVTLKAAVWSAFSS*MAMREE
Trigger: CTCCTCACGCATCGCCATCAACGAGGAGAACGCTGA...CCAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp AAGGTCCCACCCCCAAGAGGCCTCCAGGACCCGCACCAAGGCATGGGGGACACTATCCGCGTCCACTGGTaGGTCTCACAGTCAAAGCGG +
Preference number: 5 (lower is better)
Translates to: KVPPPRGLQDPHQGMGDTIRVHW*VSQSKR
Trigger: CCGCTTTGACTGTGAGACCAACCAGTGGACGCGGAT...AGTGTCCCCCATGCCTTGGTGCGGGTCCTGGAGGCCTCTTGGGGGTGGGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCTGGGAGGTATGGCAGGACATGCGCTaGGCAGTCATGTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: SPRRQGQSWWQSMPLWEVWQDMR*AVMSPI
Trigger: GATTGGGGACATGACTGCCAAGCGCATGTCCTGCCA...TACCTCCCAGAGGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GCAAGTGTCCTTCTCCCCGACGCCAGGGTCAGTCCTGGTGGCAGTCCATGCCCCTCCGCGGCCCTAATCTaGAGCCAGCCAAGCAGTGTT +
Preference number: 5 (lower is better)
Translates to: ASVLLPDARVSPGGSPCPSAALI*SQPSSV
Trigger: AACACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGA...GGGGCATGGACTGCCACCAGGACTGACCCTGGCGTCGGGGAGAAGGACACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp AAGGGTGGGATGCTGCTCTATCCCCCAGCCTGGCACAGGAACGAATaGCTGCTGATGCCTGGACGGACGGACTCCGTCCTGGGCACTTGC +
Preference number: 5 (lower is better)
Translates to: KGGMLLYPPAWHRNE*LLMPGRTDSVLGTC
Trigger: GCAAGTGCCCAGGACGGAGTCCGTCCGTCCAGGCATCAGCAGTCATTCGTTCCTGTGCCAGGCTGGGGGATAGAGCAGCATCCCACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp AGATCACCCTTAGTGGGTAAGCGGGGGCCTCCTGCAGCCGCTGGCTaGTATCCCCTAGGCTGTGGATCCAACCGCAACACTGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RSPLVGKRGPPAAAG*YPLGCGSNRNTGAR
Trigger: CCTTGCTCCAGTGTTGCGGTTGGATCCACAGCCTAGGGGATAGCAGCCAGCGGCTGCAGGAGGCCCCCGCTTACCCACTAAGGGTGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CAGGTCTTGGCCAACGTGCATCCTGTGGGTTGTTGGTGTAGGGCCTaGCCCACTAGGCTCAGCCTGCCCCATCAAGGGTGGGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: QVLANVHPVGCWCRA*PTRLSLPHQGWDAA
Trigger: AGCAGCATCCCACCCTTGATGGGGCAGGCTGAGCCTAGTGGGGCAGGCCCTACACCAACAACCCACAGGATGCACGTTGGCCAAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CCCTGGGGCCTGGCCTCAACTGTGAAATGGGCTAATCCTCCAGCTTaGAGAGTGGACAAGGGTCAGCGGCCGCCCTGCACTTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PWGLASTVKWANPPA*RVDKGQRPPCTSCV
Trigger: CACACAGGAAGTGCAGGGCGGCCGCTGACCCTTGTCCACTCTGCAAGCTGGAGGATTAGCCCATTTCACAGTTGAGGCCAGGCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCACTGCCAGACGACATTCTAGGTGGCAGACGACGATGCGCTGGTTaGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGCCATGGTCACC +
Preference number: 5 (lower is better)
Translates to: ALPDDILGGRRRCAG*GCRQPSSVGSAMVT
Trigger: GGTGACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CCAGGCACTGCCAGACGACATTCTAGGTGGCAGACGACGATGCGCTaGTTGGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGCCATGGT +
Preference number: 5 (lower is better)
Translates to: PGTARRHSRWQTTMR*LGLQAAKLSGKCHG
Trigger: ACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CTGGAGGCAGGAGACTCAGCCATGCTCGTGGGGACTAGCGAGAGCTaGACTTCTCACCAGCATCCTTGGCCTGATCCCCACTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LEAGDSAMLVGTSES*TSHQHPWPDPHCCL
Trigger: CAGGCAGCAGTGGGGATCAGGCCAAGGATGCTGGTGAGAAGTCCAGCTCTCGCTAGTCCCCACGAGCATGGCTGAGTCTCCTGCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCTCTATCCCCCAGCCTGGCACAGGAACGAATGACTGCTGATGCCTaGACGGACGGACTCCGTCCTGGGCACTTGCTTAGCCAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: ALSPSLAQERMTADA*TDGLRPGHLLSQAQ
Trigger: TTGGGCCTGGCTAAGCAAGTGCCCAGGACGGAGTCCGTCCGTCCAGGCATCAGCAGTCATTCGTTCCTGTGCCAGGCTGGGGGATAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp TCTAAGACTGCAAACCCGAACCTCTGGGGCCTGGCTGCCCGGTCTTaGCCCCATCCCAGCACGCCACATGCTGACATGTGGTCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SKTANPNLWGLAARS*PHPSTPHADMWSLQ
Trigger: CTGAAGGGACCACATGTCAGCATGTGGCGTGCTGGGATGGGGCCAAGACCGGGCAGCCAGGCCCCAGAGGTTCGGGTTTGCAGTCTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCCCTAACCATCCTGAGATGCTCTAAGACTGCAAACCCGAACCTCTaGGGCCTGGCTGCCCGGTCTTGGCCCCATCCCAGCACGCCACAT +
Preference number: 5 (lower is better)
Translates to: ALTILRCSKTANPNL*GLAARSWPHPSTPH
Trigger: ATGTGGCGTGCTGGGATGGGGCCAAGACCGGGCAGCCAGGCCCCAGAGGTTCGGGTTTGCAGTCTTAGAGCATCTCAGGATGGTTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGAGGGGCCCACAAACCTaGGAGGTCTGGGTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SRCGRQARPRCDTEGRGLRGPQT*EVWVSF
Trigger: AAAGGACACCCAGACCTCCAAGGTTTGTGGGCCCCT...CAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp GCTAATCCTCCAGCTTGCAGAGTGGACAAGGGTCAGCGGCCGCCCTaGACTTCCTGTGTGCAGCAGGTCTTGGCCAACGTGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: ANPPACRVDKGQRPP*TSCVQQVLANVHPV
Trigger: CACAGGATGCACGTTGGCCAAGACCTGCTGCACACAGGAAGTGCAGGGCGGCCGCTGACCCTTGTCCACTCTGCAAGCTGGAGGATTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp AGTGTGACGTCGGTGAACATGCAGTGCTTGCGAAGCGTGTTGAGGTaGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTGGAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SVTSVNMQCLRSVLR*ASTQSGWEALWKRV
Trigger: CACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GTCACCTTTCTGGTCTCAACCCCTGGGAACCTAGTTTCCCAGGCCCAGGACACCTGCAGGATCCTGGTCTaGCAGCGCAGGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: VTFLVSTPGNLVSQAQDTCRILV*QRRASS
Trigger: GGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGCA...GGTGTCCTGGGCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGAAAGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp AAGGAGCCCCATGCAGCCAGTGCCCCATGGCGGGCGTGTCAGTGGGCAAACCCTGGGGCCATTCTTATCTaGGAGCTCAGGGAGCAAATG +
Preference number: 5 (lower is better)
Translates to: KEPHAASAPWRACQWANPGAILI*ELREQM
Trigger: CATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCC...AGGGTTTGCCCACTGACACGCCCGCCATGGGGCACTGGCTGCATGGGGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCTGGGAAGCCCCAAGTTaGGACACCCTGCCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPWEAPS*DTLPSP
Trigger: GGGACTGGGCAGGGTGTCCAAACTTGGGGCTTCCCA...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp TTGGACAGGCTGTTGAAGTCCTCGCTCTGCCTCACCGTCTCAAAGTaGACCAGGCACATGCGCCAGGAGAACTCATACAGCCGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LDRLLKSSLCLTVSK*TRHMRQENSYSRRH
Trigger: GTGCCGCCGGCTGTATGAGTTCTCCTGGCGCATGTGCCTGGTGCACTTTGAGACGGTGAGGCAGAGCGAGGACTTCAACAGCCTGTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp TTAATGAGCTCGGCCTTTCCCAGAGCCAGGACTGGAACCCTGCCCTaGACCCCAGTGGCTAGGCCCCAGCAACACCCTGAAGAGAAGACA +
Preference number: 5 (lower is better)
Translates to: LMSSAFPRARTGTLP*TPVARPQQHPEEKT
Trigger: TGTCTTCTCTTCAGGGTGTTGCTGGGGCCTAGCCACTGGGGTGCAGGGCAGGGTTCCAGTCCTGGCTCTGGGAAAGGCCGAGCTCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CTTGCAGAGTGGACAAGGGTCAGCGGCCGCCCTGCACTTCCTGTGTaGAGCAGGTCTTGGCCAACGTGCATCCTGTGGGTTGTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: LAEWTRVSGRPALPV*SRSWPTCILWVVGV
Trigger: TACACCAACAACCCACAGGATGCACGTTGGCCAAGACCTGCTGCACACAGGAAGTGCAGGGCGGCCGCTGACCCTTGTCCACTCTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CTCCTGGTGGCTTCTGAAGCTAACGTCAGAGTCTTACAGGATGGATaGAAAGGGGCCTCCAGGGACAGGGGCAGTTGGGCCCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LLVASEANVRVLQDG*KGASRDRGSWAQLE
Trigger: CTCCAGCTGGGCCCAACTGCCCCTGTCCCTGGAGGCCCCTTTCCATCCATCCTGTAAGACTCTGACGTTAGCTTCAGAAGCCACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGCAGACAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTCTGACCATCATCCACTTGTaGGCCCCAGGGTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: SRCGRQARPRCDTEGRGLTIIHL*APGSYF
Trigger: GAAATACGACCCTGGGGCCAACAAGTGGATGATGGT...CAGACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTGTCTGCCACAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCAGGGCACTCGGAGCCTaGAGTCTGCTGCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPRALGA*SLLQAQ
Trigger: CTGGGCCTGCAGCAGACTCAAGGCTCCGAGTGCCCT...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp CTGCAGGCAGGCGGCACACTCAGGGCTCAAGTCCTGCTCCAGCCCTaGCTCACCATTCATGTGATGCCAACTGTCTCACCTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LQAGGTLRAQVLLQP*LTIHVMPTVSPLRV
Trigger: GACTCTGAGAGGTGAGACAGTTGGCATCACATGAATGGTGAGTCAGGGCTGGAGCAGGACTTGAGCCCTGAGTGTGCCGCCTGCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 90 bp GGGGTACACCTCTCCATCCCACACAGTGCTGGGCCGTCTGTTCTCTaGAGGCTGCTTTGCAGGAATTCTGCCCTCCCCACGTGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GVHLSIPHSAGPSVL*RLLCRNSALPTCSS
Trigger: ACTTGAGCACGTGGGGAGGGCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGTGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CATAGAGCTTGTTGCCGGAAGCCAGGGCATGGCAGGACATGCGCTTaGCAGTCATGTCCCCAATCCGCGTCCACTGGTTGGTCTCACAGT +
Preference number: 5 (lower is better)
Translates to: HRACCRKPGHGRTCA*QSCPQSASTGWSHS
Trigger: ACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGGCAACAAGCTCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp ACTGGTATGTGCACAGCCCCCTCCGCGGCCCTAATCTTGAGCCAGCCAAGCAGTGTGAACATGCAGTGCTaGCGAAGCGTGTTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TGMCTAPSAALILSQPSSVNMQC*RSVLRW
Trigger: CCACCTCAACACGCTTCGCAAGCACTGCATGTTCAC...ACTGCTTGGCTGGCTCAAGATTAGGGCCGCGGAGGGGGCTGTGCACATACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCTCTACACCCAGACATCCTaGGAGACCCCGTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: EQMGAKTQEDGEGPVTVLYTQTS*ETPFSE
Trigger: CTCCGAGAACGGGGTCTCCAAGGATGTCTGGGTGTA...GAGGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GCGTGTCAGTGGGCAAACCCTGCCCAAAGGTCCCACCCCCAAGAGGCCTCCAGGACCATGGCACGTCCTTaGTGCTATGTGATAAGTGTG +
Preference number: 5 (lower is better)
Translates to: ACQWANPAQRSHPQEASRTMARP*CYVISV
Trigger: CACACTTATCACATAGCACAAAGGACGTGCCATGGT...CCTGGAGGCCTCTTGGGGGTGGGACCTTTGGGCAGGGTTTGCCCACTGACACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp TCCCCTAATAGAGTAAGTTCCCTCTCACATACCACTCCGAGGCCCTaGAAGGAAAAGGTGAGCCCTCTCGCACAGGCGGGCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPNRVSSLSHTTPRP*KEKVSPLAQAGTGR
Trigger: CCTGCCTGTGCCCGCCTGTGCGAGAGGGCTCACCTTTTCCTTTCAGGGCCTCGGAGTGGTATGTGAGAGGGAACTTACTCTATTAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GGCCATGATCTGGGGTGCAGAGGCCACAGTGTGCAGGGGACCTCCTaGTGGCTTCTGAAGCTAACGTCAGAGTCTTACAGGATGGATGGA +
Preference number: 5 (lower is better)
Translates to: GHDLGCRGHSVQGTS*WLLKLTSESYRMDG
Trigger: TCCATCCATCCTGTAAGACTCTGACGTTAGCTTCAGAAGCCACCAGGAGGTCCCCTGCACACTGTGGCCTCTGCACCCCAGATCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CGGGGATACCCAGACGCCCGGGGACACATTACGTATTCTCAGTGCTaGAAGGGAAACCCAGGCGGCTTGGTACTTGATTCGAATGGCCAG +
Preference number: 5 (lower is better)
Translates to: RGYPDARGHITYSQC*KGNPGGLVLDSNGQ
Trigger: CTGGCCATTCGAATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGTAATGTGTCCCCGGGCGTCTGGGTATCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp GATGCTTCTCTTCTCTTGCCTAAAGCTCAGAACAGCCCAAGGCTGCTGCTCCCCTGCTTGCGAAGCGTGTaGAGGTGGGCCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: DASLLLPKAQNSPRLLLPCLRSV*RWASTQ
Trigger: CTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCA...GGGGAGCAGCAGCCTTGGGCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GCATTAGGATGGTCACTGACAGGCGCCAACCTCTCCATAGCCCAGGTGTCAGGGACAAAGAGCTTCAGCTaGGCACTCACCACTGCGGCA +
Preference number: 5 (lower is better)
Translates to: ALGWSLTGANLSIAQVSGTKSFS*ALTTAA
Trigger: TGCCGCAGTGGTGAGTGCCAAGCTGAAGCTCTTTGT...CCCTGACACCTGGGCTATGGAGAGGTTGGCGCCTGTCAGTGACCATCCTAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp TACGTATTCTCAGTGCTGGAAGGGAAACCCAGGCGGCTTGGTACTTaGTTCGAATGGCCAGGCCGCCCCAGTGAGTCTGTGCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: YVFSVLEGKPRRLGT*FEWPGRPSESVLPE
Trigger: CTCTGGAAGCACAGACTCACTGGGGCGGCCTGGCCATTCGAATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 90 bp CTGGAACAAAATGACAATGACACAGCTGCCCATGAGGCTCGGGCGTaGGAACGCCAGATCCACCATTCACCGGCAGCGCAGTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LEQNDNDTAAHEARA*ERQIHHSPAAQSGD
Trigger: ATCACCAGACTGCGCTGCCGGTGAATGGTGGATCTGGCGTTCTCACGCCCGAGCCTCATGGGCAGCTGTGTCATTGTCATTTTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp CAGTGCTGGGCCGTCTGTTCTCTGAAGGCTGCTTTGCAGGAATTCTaGCCTCCCCACGTGCTCAAGTTGTTTCCAGATACAGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QCWAVCSLKAALQEF*PPHVLKLFPDTEAG
Trigger: CCCAGCCTCTGTATCTGGAAACAACTTGAGCACGTGGGGAGGGCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp ACCTCTCCATCCCACACAGTGCTGGGCCGTCTGTTCTCTGAAGGCTaGTTTGCAGGAATTCTGCCCTCCCCACGTGCTCAAGTTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TSPSHTVLGRLFSEG*FAGILPSPRAQVVS
Trigger: GGAAACAACTTGAGCACGTGGGGAGGGCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp ACGGCTGTCCCCTTTAAGTGGGGTACACCTCTCCATCCCACACAGTaGTGGGCCGTCTGTTCTCTGAAGGCTGCTTTGCAGGAATTCTGC +
Preference number: 5 (lower is better)
Translates to: TAVPFKWGTPLHPTQ*WAVCSLKAALQEFC
Trigger: GCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGTGTACCCCACTTAAAGGGGACAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp ATTCTGCCCTCCCCACGTGCTCAAGTTGTTTCCAGATACAGAGGCTaGGTTCGGCGACTGAGAAGGCCCCCAAATCCCTTCAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ILPSPRAQVVSRYRG*VRRLRRPPNPFKLL
Trigger: GAGGAGCTTGAAGGGATTTGGGGGCCTTCTCAGTCGCCGAACCCAGCCTCTGTATCTGGAAACAACTTGAGCACGTGGGGAGGGCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp GCTGTCCCCTTTAAGTGGGGTACACCTCTCCATCCCACACAGTGCTaGGCCGTCTGTTCTCTGAAGGCTGCTTTGCAGGAATTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: AVPFKWGTPLHPTQC*AVCSLKAALQEFCP
Trigger: AGGGCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGTGTACCCCACTTAAAGGGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp GTCACCTTTCTGGTCTCAACCCCTGGGAACCTAGTTTCCCAGGCCCAGGACACCATCATGCCCAGGCAGTaGGAGGGGAAAAGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VTFLVSTPGNLVSQAQDTIMPRQ*EGKRFF
Trigger: GAAGAACCTTTTCCCCTCCAACTGCCTGGGCATGAT...GGTGTCCTGGGCCTGGGAAACTAGGTTCCCAGGGGTTGAGACCAGAAAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CCTAATCTTGAGCCAGCCAAGCAGTGTTCACACTGCAGGTGCCTGGGAAGCCCCTCATCCATGATAAGCTaGGTGCGCTCGTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: PNLEPAKQCSHCRCLGSPSSMIS*VRSSAM
Trigger: CATGGCAGACGAGCGCACCAAGCTTATCATGGATGA...GGGGCTTCCCAGGCACCTGCAGTGTGAACACTGCTTGGCTGGCTCAAGATTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGTGGGGGCACTCGGCCTaGATCGTCCACCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVWGHSA*IVHLFS
Trigger: GGAGAACAGGTGGACGATCAAGGCCGAGTGCCCCCA...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGGTCCCGTCACTGTCCAGGTCTGGGTGTCCTTaGCTAATAAGGCCTCATGGA +
Preference number: 5 (lower is better)
Translates to: GSKWGPKRKRMVRVPSLSRSGCP*LIRPHG
Trigger: TCCATGAGGCCTTATTAGCAAAGGACACCCAGACCT...GGACAGTGACGGGACCCTCACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp CCCTTTAATTTTTGGCAGGTGCTCCCTGGGGCCTGGCCTCAACTGTaGAATGGGCTAATCCTCCAGCTTGCAGAGTGGACAAGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PFNFWQVLPGAWPQL*NGLILQLAEWTRVS
Trigger: GCTGACCCTTGTCCACTCTGCAAGCTGGAGGATTAGCCCATTTCACAGTTGAGGCCAGGCCCCAGGGAGCACCTGCCAAAAATTAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 90 bp GCTCTTTGTCCTTGGGCTGAGGTCTGTCCCCAGCTCTCCTGGTTCTaGAGCTTGCAGCCTATCATGGGACTTCTCAGCCTCTATCACCAA +
Preference number: 5 (lower is better)
Translates to: ALCPWAEVCPQLSWF*SLQPIMGLLSLYHQ
Trigger: TTGGTGATAGAGGCTGAGAAGTCCCATGATAGGCTGCAAGCTGCAGAACCAGGAGAGCTGGGGACAGACCTCAGCCCAAGGACAAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CATGATCTGGGGTGCAGAGGCCACAGTGTGCAGGGGACCTCCTGGTaGCTTCTGAAGCTAACGTCAGAGTCTTACAGGATGGATGGAAAG +
Preference number: 5 (lower is better)
Translates to: HDLGCRGHSVQGTSW*LLKLTSESYRMDGK
Trigger: CTTTCCATCCATCCTGTAAGACTCTGACGTTAGCTTCAGAAGCCACCAGGAGGTCCCCTGCACACTGTGGCCTCTGCACCCCAGATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 90 bp CTCTTGGCTCTTTGTCCTTGGGCTGAGGTCTGTCCCCAGCTCTCCTaGTTCTGCAGCTTGCAGCCTATCATGGGACTTCTCAGCCTCTAT +
Preference number: 5 (lower is better)
Translates to: LLALCPWAEVCPQLS*FCSLQPIMGLLSLY
Trigger: ATAGAGGCTGAGAAGTCCCATGATAGGCTGCAAGCTGCAGAACCAGGAGAGCTGGGGACAGACCTCAGCCCAAGGACAAAGAGCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGCATGGGCGCCGCCTaGGACCATTCCTCATGTACG +
Preference number: 5 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVSMGAA*DHSSCT
Trigger: CGTACATGAGGAATGGTCCAAGGCGGCGCCCATGCT...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 90 bp CACGTGCTCAAGTTGTTTCCAGATACAGAGGCTGGGTTCGGCGACTaGGAAGGCCCCCAAATCCCTTCAAGCTCCTCACAAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: HVLKLFPDTEAGFGD*EGPQIPSSSSQVRS
Trigger: GCTTCTCACTTGTGAGGAGCTTGAAGGGATTTGGGGGCCTTCTCAGTCGCCGAACCCAGCCTCTGTATCTGGAAACAACTTGAGCACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS-3UTR CAA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGAGGTTGTCCTGGAAGTaGACAGTGTCATCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVRLSWK*TVSSRL
Trigger: GAGCCGGGATGACACTGTCAACTTCCAGGACAACCT...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CCCTCTGGGAGGTATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGTCGTATTTCTCCACTaGTTTCAGGGAGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: PSGRYVFPQTTAKLKRPPVVFLH*FQGDRR
Trigger: CCTTCTGTCTCCCTGAAACAAGTGGAGAAATACGAC...TGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATACCTCCCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TATGTCTTCCCACAAACCACTGCAAAGCTGAAGAGGCCCCCAGGGGCACGGATGGATGCTTCTCTTCTCTaGCCTAAAGCTCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: YVFPQTTAKLKRPPGARMDASLL*PKAQNS
Trigger: GCTGTTCTGAGCTTTAGGCAAGAGAAGAGAAGCATC...CATCCGTGCCCCTGGGGGCCTCTTCAGCTTTGCAGTGGTTTGTGGGAAGACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp TTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCCAAAACGCAAGAGGATGGTGCTCTCAAATGGTGGCTaGGGAGTGAGCGAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: FLSWSSGSKWGPKRKRMVLSNGG*GVSERH
Trigger: ATGCCTCTCGCTCACTCCCAAGCCACCATTTGAGAG...CACCATCCTCTTGCGTTTTGGCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp CAGCAGTTCTCTCGGGGCCATTCTTATCTTGGAGCTCAGGGAGCAAATGGGGGCAAAGCAACACAACTTTaGGGGAAAGCACCATGGCAC +
Preference number: 5 (lower is better)
Translates to: QQFSRGHSYLGAQGANGGKATQL*GKAPWH
Trigger: GTGCCATGGTGCTTTCCCCAAAAGTTGTGTTGCTTT...GCCCCCATTTGCTCCCTGAGCTCCAAGATAAGAATGGCCCCGAGAGAACTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCACCTCCGGGTGCAGGTaGTCCTGGAAGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: GGDSNEQMFSSSLGAILITSGCR*SWKLTV
Trigger: CACTGTCAACTTCCAGGACAACCTGCACCCGGAGGT...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS-3UTR CAA 90 bp GGAGGTGACAGCAATGAACAAATGTTCAGCAGTTCTCTCGGGGCCATTCTTATCTTGGGGATGATCTCCTaGGCCTTGTGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: GGDSNEQMFSSSLGAILILGMIS*ALWSTW
Trigger: CCAGGTGGACCACAAGGCCAAGGAGATCATCCCCAA...GATAAGAATGGCCCCGAGAGAACTGCTGAACATTTGTTCATTGCTGTCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 90 bp AGCAACTTCTTTAAGACAGGAGAGAATGTACTGTACTGTCCCTCCTaGAGCAGTGACGGAGCCCACAGTGGATTAATGAGCTCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SNFFKTGENVLYCPS*SSDGAHSGLMSSAF
Trigger: AAAGGCCGAGCTCATTAATCCACTGTGGGCTCCGTCACTGCTGCAGGAGGGACAGTACAGTACATTCTCTCCTGTCTTAAAGAAGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp CAAGCAAGGCCACGCTGTGACACTGAAGGCCGCGGTTaGCGGAGACGATCCCCGCCGCCGCCGCCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: QARPRCDTEGRG*RRRSPPPPPPQ
Trigger: CTGAGGCGGCGGCGGCGGCGGGGATCGTCTCCGGCAACCGCGGCCTTCAGTGTCACAGCGTGGCCTTGCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559131.1
CDS TCA 72 bp TGGCCAAGCCTGTGCTCTGTGCCAGGGGCGCAGACGTaGGGATGCCCGTGGCCAGCTCCCCAGAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: WPSLCSVPGAQT*GCPWPAPQRRL
Trigger: CAGGCGCCTCTGGGGAGCTGGCCACGGGCATCCTCACGTCTGCGCCCCTGGCACAGAGCACAGGCTTGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp CGGGTCTCATGGACACTGACCGACATGGTGCGTCAGTaGCGGAGACGATCCCCGCCGCCGCCGCCGCCTCAG +
Preference number: 6 (lower is better)
Translates to: RVSWTLTDMVRQ*RRRSPPPPPPQ
Trigger: CTGAGGCGGCGGCGGCGGCGGGGATCGTCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp CGTGAGGATGCCCGTGGCCAGCTCCCCAGAGGCGCCTaGAGGCAGGCGGCACACTCAGGGCTCAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: REDARGQLPRGA*RQAAHSGLKSC
Trigger: GCAGGACTTGAGCCCTGAGTGTGCCGCCTGCCTGCAGGCGCCTCTGGGGAGCTGGCCACGGGCATCCTCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp GGAAGGCCAGGCATGCCCGGGCAGCGGCTTCTGGGCTaGAGGCCCTTCTATGGAGAGCCCAGCTCACTCCCT +
Preference number: 6 (lower is better)
Translates to: GRPGMPGQRLLG*RPFYGEPSSLP
Trigger: AGGGAGTGAGCTGGGCTCTCCATAGAAGGGCCTGCAGCCCAGAAGCCGCTGCCCGGGCATGCCTGGCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp TGCCATGGTCACCAGGGGCACCCACCGCGGGGGAGGTaGCAGGAGTGCTTTGTTTCCACCCTTCCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: CHGHQGHPPRGR*QECFVSTLPGP
Trigger: GGGGCCAGGAAGGGTGGAAACAAAGCACTCCTGCCACCTCCCCCGCGGTGGGTGCCCCTGGTGACCATGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GATGCGCTGGTTGGGGCTGCAGGCAGCCAAGCTCAGTaGGAAGTGCCATGGTCACCAGGGGCACCCACCGCG +
Preference number: 6 (lower is better)
Translates to: DALVGAAGSQAQ*EVPWSPGAPTA
Trigger: CGCGGTGGGTGCCCCTGGTGACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp CCGTCACATAGACCTTGCAGCCGATCGCTGAGGCGCTaGACTCCTTCCGGGGGCTGGGCAGGTCGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: PSHRPCSRSLRR*TPSGGWAGRPW
Trigger: CCAAGGCCGACCTGCCCAGCCCCCGGAAGGAGTTCAGCGCCTCAGCGATCGGCTGCAAGGTCTATGTGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp GGCCGGGCACAGGGGCTGGTGACCACGCCATCATTCTaGAGGATCCTGGTCTTGCAGCGCAGGGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: GRAQGLVTTPSF*RILVLQRRASS
Trigger: GGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGCAGAATGATGGCGTGGTCACCAGCCCCTGTGCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp GCTTTGTTTCCACCCTTCCTGGCCCCGGTCTGCGGCTaGCTGAGTTGGGGGCTCTCCTCTGGCTCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: ALFPPFLAPVCG*LSWGLSSGSAL
Trigger: CAGGGCTGAGCCAGAGGAGAGCCCCCAACTCAGGCAGCCGCAGACCGGGGCCAGGAAGGGTGGAAACAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GCAAACCCGAACCTCTGGGGCCTGGCTGCCCGGTCTTaGCCCCATCCCAGCACGCCACATGCTGACATGTGG +
Preference number: 6 (lower is better)
Translates to: ANPNLWGLAARS*PHPSTPHADMW
Trigger: CCACATGTCAGCATGTGGCGTGCTGGGATGGGGCCAAGACCGGGCAGCCAGGCCCCAGAGGTTCGGGTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp CGAAGCGTGTTGAGGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTaGTGGAAGAGGGTGACGTTCATGGACCCCGTGCTGCTCCGCGAC +
Preference number: 6 (lower is better)
Translates to: RSVLRWASTQSGWEA*WKRVTFMDPVLLRD
Trigger: GTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp GCACGGTCGCCCGCCCAGAGTGTGACGTCGGTGAACATGCAGTGCTaGCGAAGCGTGTTGAGGTGGGCCAGCACACAGTCCGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: ARSPAQSVTSVNMQC*RSVLRWASTQSGWE
Trigger: CTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACTCTGGGCGGGCGACCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp GCCCTGACAGCTCCGCAGTGGCCGCCTGAGCAGCGAGAGCTCTGCTaGCAGCCACTGTGGCTCCATTTCCTGGTGACCCAGGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: ALTAPQWPPEQRELC*QPLWLHFLVTQGRP
Trigger: TGGCCTTCCCTGGGTCACCAGGAAATGGAGCCACAGTGGCTGCAAGCAGAGCTCTCGCTGCTCAGGCGGCCACTGCGGAGCTGTCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp CCGTGCTGCTCCGCGACTTGCGGGTCTCATGGACACTaGCCGACATGGTGCGTCAGTGCCGGAGACGATCCC +
Preference number: 6 (lower is better)
Translates to: PCCSATCGSHGH*PTWCVSAGDDP
Trigger: GGGATCGTCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp TCGGCCTTTCCCAGAGCCAGGACTGGAACCCTGCCCTaGACCCCAGTGGCTAGGCCCCAGCAACACCCTGAA +
Preference number: 6 (lower is better)
Translates to: SAFPRARTGTLP*TPVARPQQHPE
Trigger: TTCAGGGTGTTGCTGGGGCCTAGCCACTGGGGTGCAGGGCAGGGTTCCAGTCCTGGCTCTGGGAAAGGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp AGGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTaGAAGAGGGTGACGTTCATGGACCCCGTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RWASTQSGWEAL*KRVTFMDPVLL
Trigger: GAGCAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp TCCGTGGCTCCAGGTCGTGCTTCACCCACTGGAGGATaGCCTCGAAGACCACCCGCTCGTCCTCGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SVAPGRASPTGG*PRRPPARPRSP
Trigger: TGGAGACCGAGGACGAGCGGGTGGTCTTCGAGGCCATCCTCCAGTGGGTGAAGCACGACCTGGAGCCACGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp CGCTCAGGTTCCAGCTCAGCAATTCCCCGCCGCTTCTaGACGGCTGCTGGCCAAGCCTGTGCTCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: RSGSSSAIPRRF*TAAGQACALCQ
Trigger: CTGGCACAGAGCACAGGCTTGGCCAGCAGCCGTCCAGAAGCGGCGGGGAATTGCTGAGCTGGAACCTGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GATGCTCTAAGACTGCAAACCCGAACCTCTGGGGCCTaGCTGCCCGGTCTTGGCCCCATCCCAGCACGCCAC +
Preference number: 6 (lower is better)
Translates to: DALRLQTRTSGA*LPGLGPIPARH
Trigger: GTGGCGTGCTGGGATGGGGCCAAGACCGGGCAGCCAGGCCCCAGAGGTTCGGGTTTGCAGTCTTAGAGCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp AGGAACTCGGCGGCAGCATCCCGCACATCGTGGAACTaGAGCATGTCGCCTGCCTCCAGCAGTGACTCAGCG +
Preference number: 6 (lower is better)
Translates to: RNSAAASRTSWN*SMSPASSSDSA
Trigger: CGCTGAGTCACTGCTGGAGGCAGGCGACATGCTGCAGTTCCACGATGTGCGGGATGCTGCCGCCGAGTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp ACAGCTCCGCAGTGGCCGCCTGAGCAGCGAGAGCTCTaGTTGCAGCCACTGTGGCTCCATTTCCTGGTGACC +
Preference number: 6 (lower is better)
Translates to: TAPQWPPEQREL*LQPLWLHFLVT
Trigger: GGTCACCAGGAAATGGAGCCACAGTGGCTGCAAGCAGAGCTCTCGCTGCTCAGGCGGCCACTGCGGAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp CCAGCTTGCAGAGTGGACAAGGGTCAGCGGCCGCCCTaGACTTCCTGTGTGCAGCAGGTCTTGGCCAACGTG +
Preference number: 6 (lower is better)
Translates to: PACRVDKGQRPP*TSCVQQVLANV
Trigger: CACGTTGGCCAAGACCTGCTGCACACAGGAAGTGCAGGGCGGCCGCTGACCCTTGTCCACTCTGCAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp ATGGACCCCGTGCTGCTCCGCGACTTGCGGGTCTCATaGACACTGACCGACATGGTGCGTCAGTGCCGGAGA +
Preference number: 6 (lower is better)
Translates to: MDPVLLRDLRVS*TLTDMVRQCRR
Trigger: TCTCCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp ATCTCGGGCCCAGGCACTGCCAGACGACATTCTAGGTaGCAGACGACGATGCGCTGGTTGGGGCTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: ISGPGTARRHSR*QTTMRWLGLQA
Trigger: TGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGCCTGGGCCCGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CAGCAGGTCTTGGCCAACGTGCATCCTGTGGGTTGTTaGTGTAGGGCCTGCCCCACTAGGCTCAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: QQVLANVHPVGC*CRACPTRLSLP
Trigger: GGGCAGGCTGAGCCTAGTGGGGCAGGCCCTACACCAACAACCCACAGGATGCACGTTGGCCAAGACCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp TTTTCCTGCCATCGGGCATCAGAGCTCCAGGTTCTCTaGCCTCTGGGACTTGCTGCCCACCACCCCACCCCC +
Preference number: 6 (lower is better)
Translates to: FSCHRASELQVL*PLGLAAHHPTP
Trigger: GGGGGTGGGGTGGTGGGCAGCAAGTCCCAGAGGCCAGAGAACCTGGAGCTCTGATGCCCGATGGCAGGAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp TTGAGGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTaGTGGAAGAGGGTGACGTTCATGGACCCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRWASTQSGWEA*WKRVTFMDPVL
Trigger: CAGCACGGGGTCCATGAACGTCACCCTCTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp TGCAGGATCCTGGTCTTGCAGCGCAGGGCCTCATCCATGATAAGCTaGGTGCGCTCGTCTGCCATGAGGAGGGCCTCGCTGGAGACGGCC +
Preference number: 6 (lower is better)
Translates to: CRILVLQRRASSMIS*VRSSAMRRASLETA
Trigger: GGCCGTCTCCAGCGAGGCCCTCCTCATGGCAGACGAGCGCACCAAGCTTATCATGGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp TTGTGGAAGAGGGTGACGTTCATGGACCCCGTGCTGCTCCGCGACTaGCGGGTCTCATGGACACTGACCGACATGGTGCGTCAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: LWKRVTFMDPVLLRD*RVSWTLTDMVRQCR
Trigger: CCGGCACTGACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCTCTTCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp GCCCAGAGTGTGACGTCGGTGAACATGCAGTGCTTGCGAAGCGTGTaGAGGTGGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: AQSVTSVNMQCLRSV*RWASTQSGWEALWK
Trigger: CTTCCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACTCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp GGCACTGCCAGACGACATTCTAGGTGGCAGACGACGATGCGCTGGTaGGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGCCATGGTCAC +
Preference number: 6 (lower is better)
Translates to: GTARRHSRWQTTMRW*GLQAAKLSGKCHGH
Trigger: GTGACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp ACTCCTTCCGGGGGCTGGGCAGGTCGGCCTTGGGGATaGTCTCCTTGGCCTTGTGGTCCACCTGGTAGATCT +
Preference number: 6 (lower is better)
Translates to: TPSGGWAGRPWG*SPWPCGPPGRS
Trigger: AGATCTACCAGGTGGACCACAAGGCCAAGGAGATCATCCCCAAGGCCGACCTGCCCAGCCCCCGGAAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp TCGCCCGCCCAGAGTGTGACGTCGGTGAACATGCAGTaGTTGCGAAGCGTGTTGAGGTGGGCCAGCACACAG +
Preference number: 6 (lower is better)
Translates to: SPAQSVTSVNMQ*LRSVLRWASTQ
Trigger: CTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACTCTGGGCGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp CGCTCTGCCTCACCGTCTCAAAGTGCACCAGGCACATaGGCCAGGAGAACTCATACAGCCGGCGGCACTGGT +
Preference number: 6 (lower is better)
Translates to: RSASPSQSAPGT*ARRTHTAGGTG
Trigger: ACCAGTGCCGCCGGCTGTATGAGTTCTCCTGGCGCATGTGCCTGGTGCACTTTGAGACGGTGAGGCAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp GGGTCCCAAAGTAGCCCCCGACCACATAGAGCTTGTTaGCGGAAGCCAGGGCATGGCAGGACATGCGCTTGG +
Preference number: 6 (lower is better)
Translates to: GSQSSPRPHRAC*RKPGHGRTCAW
Trigger: CCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGGCAACAAGCTCTATGTGGTCGGGGGCTACTTTGGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp GCACTGCCAGACGACATTCTAGGTGGCAGACGACGATaGGCTGGTTGGGGCTGCAGGCAGCCAAGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: ALPDDILGGRRR*AGWGCRQPSSV
Trigger: CACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp TTAGTGGGTAAGCGGGGGCCTCCTGCAGCCGCTGGCTaGTATCCCCTAGGCTGTGGATCCAACCGCAACACT +
Preference number: 6 (lower is better)
Translates to: LVGKRGPPAAAG*YPLGCGSNRNT
Trigger: AGTGTTGCGGTTGGATCCACAGCCTAGGGGATAGCAGCCAGCGGCTGCAGGAGGCCCCCGCTTACCCACTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp TGGACAAGGGTCAGCGGCCGCCCTGCACTTCCTGTGTaGAGCAGGTCTTGGCCAACGTGCATCCTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: WTRVSGRPALPV*SRSWPTCILWV
Trigger: AACCCACAGGATGCACGTTGGCCAAGACCTGCTGCACACAGGAAGTGCAGGGCGGCCGCTGACCCTTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp TCGGTGAACATGCAGTGCTTGCGAAGCGTGTTGAGGTaGGCCAGCACACAGTCCGGGTGGGAGGCCTTGTGG +
Preference number: 6 (lower is better)
Translates to: SVNMQCLRSVLR*ASTQSGWEALW
Trigger: CCACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp GCTTGGCAGTCATGTCCCCAATCCGCGTCCACTGGTTaGTCTCACAGTCAAAGCGGTAGGCCGAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: AWQSCPQSASTG*SHSQSGRPRRL
Trigger: CAGCCGCCTCGGCCTACCGCTTTGACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp TGTTGCCGGAAGCCAGGGCATGGCAGGACATGCGCTTaGCAGTCATGTCCCCAATCCGCGTCCACTGGTTGG +
Preference number: 6 (lower is better)
Translates to: CCRKPGHGRTCA*QSCPQSASTGW
Trigger: CCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp GACGACATTCTAGGTGGCAGACGACGATGCGCTGGTTaGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGCC +
Preference number: 6 (lower is better)
Translates to: DDILGGRRRCAG*GCRQPSSVGSA
Trigger: GGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GCCAGACGACATTCTAGGTGGCAGACGACGATGCGCTaGTTGGGGCTGCAGGCAGCCAAGCTCAGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: ARRHSRWQTTMR*LGLQAAKLSGK
Trigger: CTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CTCACCAGCATCCTTGGCCTGATCCCCACTGCTGCCTaGGAGAGTAGCGTCAGGGAGGGAAACGTAGGGAGC +
Preference number: 6 (lower is better)
Translates to: LTSILGLIPTAA*ESSVREGNVGS
Trigger: GCTCCCTACGTTTCCCTCCCTGACGCTACTCTCCCAGGCAGCAGTGGGGATCAGGCCAAGGATGCTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp TGGATCCAACCGCAACACTGGAGCAAGGGGCTGCCCTaGAGGTCGCTCAGGTTCCAGCTCAGCAATTCCCCG +
Preference number: 6 (lower is better)
Translates to: WIQPQHWSKGLP*RSLRFQLSNSP
Trigger: CGGGGAATTGCTGAGCTGGAACCTGAGCGACCTCCAGGGCAGCCCCTTGCTCCAGTGTTGCGGTTGGATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CTGCTATCCCCTAGGCTGTGGATCCAACCGCAACACTaGAGCAAGGGGCTGCCCTGGAGGTCGCTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LLSPRLWIQPQH*SKGLPWRSLRF
Trigger: GAACCTGAGCGACCTCCAGGGCAGCCCCTTGCTCCAGTGTTGCGGTTGGATCCACAGCCTAGGGGATAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CCCAGCCTGGCACAGGAACGAATGACTGCTGATGCCTaGACGGACGGACTCCGTCCTGGGCACTTGCTTAGC +
Preference number: 6 (lower is better)
Translates to: PSLAQERMTADA*TDGLRPGHLLS
Trigger: GCTAAGCAAGTGCCCAGGACGGAGTCCGTCCGTCCAGGCATCAGCAGTCATTCGTTCCTGTGCCAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp AGGGTGACGTTCATGGACCCCGTGCTGCTCCGCGACTaGCGGGTCTCATGGACACTGACCGACATGGTGCGT +
Preference number: 6 (lower is better)
Translates to: RVTFMDPVLLRD*RVSWTLTDMVR
Trigger: ACGCACCATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp CCCGCCCAGAGTGTGACGTCGGTGAACATGCAGTGCTaGCGAAGCGTGTTGAGGTGGGCCAGCACACAGTCC +
Preference number: 6 (lower is better)
Translates to: PAQSVTSVNMQC*RSVLRWASTQS
Trigger: GGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGACGTCACACTCTGGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp AGCTCCAGCACCTCCGGGTGCAGGTTGTCCTGGAAGTaGACAGTGTCATCCCGGCTCTCCCGAAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: SSSTSGCRLSWK*TVSSRLSRRPW
Trigger: CCATGGCCTTCGGGAGAGCCGGGATGACACTGTCAACTTCCAGGACAACCTGCACCCGGAGGTGCTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp CTGGTCTTGCAGCGCAGGGCCTCATCCATGATAAGCTaGGTGCGCTCGTCTGCCATGAGGAGGGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: LVLQRRASSMIS*VRSSAMRRASL
Trigger: CAGCGAGGCCCTCCTCATGGCAGACGAGCGCACCAAGCTTATCATGGATGAGGCCCTGCGCTGCAAGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp ATTCTAGGTGGCAGACGACGATGCGCTGGTTGGGGCTaGAGGCAGCCAAGCTCAGTGGGAAGTGCCATGGTC +
Preference number: 6 (lower is better)
Translates to: ILGGRRRCAGWG*RQPSSVGSAMV
Trigger: GACCATGGCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp GGCTGTGGATCCAACCGCAACACTGGAGCAAGGGGCTaGCCTGGAGGTCGCTCAGGTTCCAGCTCAGCAATT +
Preference number: 6 (lower is better)
Translates to: GCGSNRNTGARG*PGGRSGSSSAI
Trigger: AATTGCTGAGCTGGAACCTGAGCGACCTCCAGGGCAGCCCCTTGCTCCAGTGTTGCGGTTGGATCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GGAGACTCAGCCATGCTCGTGGGGACTAGCGAGAGCTaGACTTCTCACCAGCATCCTTGGCCTGATCCCCAC +
Preference number: 6 (lower is better)
Translates to: GDSAMLVGTSES*TSHQHPWPDPH
Trigger: GTGGGGATCAGGCCAAGGATGCTGGTGAGAAGTCCAGCTCTCGCTAGTCCCCACGAGCATGGCTGAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CCTGTGTGCAGCAGGTCTTGGCCAACGTGCATCCTGTaGGTTGTTGGTGTAGGGCCTGCCCCACTAGGCTCA +
Preference number: 6 (lower is better)
Translates to: PVCSRSWPTCIL*VVGVGPAPLGS
Trigger: TGAGCCTAGTGGGGCAGGCCCTACACCAACAACCCACAGGATGCACGTTGGCCAAGACCTGCTGCACACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp TTGTTGCCGGAAGCCAGGGCATGGCAGGACATGCGCTaGGCAGTCATGTCCCCAATCCGCGTCCACTGGTTG +
Preference number: 6 (lower is better)
Translates to: LLPEARAWQDMR*AVMSPIRVHWL
Trigger: CAACCAGTGGACGCGGATTGGGGACATGACTGCCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp AGACGACATTCTAGGTGGCAGACGACGATGCGCTGGTaGGGGCTGCAGGCAGCCAAGCTCAGTGGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: RRHSRWQTTMRW*GLQAAKLSGKC
Trigger: GCACTTCCCACTGAGCTTGGCTGCCTGCAGCCCCAACCAGCGCATCGTCGTCTGCCACCTAGAATGTCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp AGCCTCGGGGCCAGGCTCCTGTGTTCCCTCTCAGGCTGGGTCCCTTaGTTCCCTCTCAGGCTGGGTCCCTTTAATTTTTGGCAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SLGARLLCSLSGWVP*FPLRLGPFNFWQVL
Trigger: GAGCACCTGCCAAAAATTAAAGGGACCCAGCCTGAGAGGGAACAAAGGGACCCAGCCTGAGAGGGAACACAGGAGCCTGGCCCCGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp CGCCTGCCTCCAGCAGTGACTCAGCGTTCTCCTCGTTaGTGGCGATGCGTGAGGAGTAGGCAAAGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RLPPAVTQRSPR*WRCVRSRQSPA
Trigger: TGCTGGACTTTGCCTACTCCTCACGCATCGCCATCAACGAGGAGAACGCTGAGTCACTGCTGGAGGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp CTGGCCTCAACTGTGAAATGGGCTAATCCTCCAGCTTaGAGAGTGGACAAGGGTCAGCGGCCGCCCTGCACT +
Preference number: 6 (lower is better)
Translates to: LASTVKWANPPA*RVDKGQRPPCT
Trigger: AGTGCAGGGCGGCCGCTGACCCTTGTCCACTCTGCAAGCTGGAGGATTAGCCCATTTCACAGTTGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CATGGCCAAAGCGGGCAATCAGCATGGGCGCCGCCTTaGACCATTCCTCATGTACGGTGTCGTACACCCAGA +
Preference number: 6 (lower is better)
Translates to: HGQSGQSAWAPP*TIPHVRCRTPR
Trigger: TCTGGGTGTACGACACCGTACATGAGGAATGGTCCAAGGCGGCGCCCATGCTGATTGCCCGCTTTGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp TCCACCTGTTCTCCGAGGGGTCATAGCACTGGACCTTaGACACCATGTCCCGGTGGATGCTGGTTCCTCCGA +
Preference number: 6 (lower is better)
Translates to: STCSPRGHSTGP*TPCPGGCWFLR
Trigger: TCGGAGGAACCAGCATCCACCGGGACATGGTGTCCAAGGTCCAGTGCTATGACCCCTCGGAGAACAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp GCTGTGAATTCCGTGTCACCTCCCATGATGAAGATCTaGCTGCCCAGGACGGCAGCGGCTGTGTACCGCCAA +
Preference number: 6 (lower is better)
Translates to: AVNSVSPPMMKI*LPRTAAAVYRQ
Trigger: TTGGCGGTACACAGCCGCTGCCGTCCTGGGCAGCCAGATCTTCATCATGGGAGGTGACACGGAATTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp CTGGGCACTTGCTTAGCCAGGCCCAACCCTCAAGGCTaGCAGAAATCCTCAGGCCTGTGCTCTGGGATTTCC +
Preference number: 6 (lower is better)
Translates to: LGTCLARPNPQG*QKSSGLCSGIS
Trigger: GGAAATCCCAGAGCACAGGCCTGAGGATTTCTGCCAGCCTTGAGGGTTGGGCCTGGCTAAGCAAGTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GCAGGTGCTCCCTGGGGCCTGGCCTCAACTGTGAAATaGGCTAATCCTCCAGCTTGCAGAGTGGACAAGGGT +
Preference number: 6 (lower is better)
Translates to: AGAPWGLASTVK*ANPPACRVDKG
Trigger: ACCCTTGTCCACTCTGCAAGCTGGAGGATTAGCCCATTTCACAGTTGAGGCCAGGCCCCAGGGAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp ATGTCCCGGTGGATGCTGGTTCCTCCGAAAACAAAGAGCTTCAGCTaGGCACTCACCACTGCGGCATTGCTGACGCCATCCCGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: MSRWMLVPPKTKSFS*ALTTAALLTPSRKG
Trigger: CCCCTTGCGGGATGGCGTCAGCAATGCCGCAGTGGTGAGTGCCAAGCTGAAGCTCTTTGTTTTCGGAGGAACCAGCATCCACCGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS TCA 72 bp AGAGTAAGTTCCCTCTCACATACCACTCCGAGGCCCTaGAAGGAAAAGGTGAGCCCTCTCGCACAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: RVSSLSHTTPRP*KEKVSPLAQAG
Trigger: GCCCGCCTGTGCGAGAGGGCTCACCTTTTCCTTTCAGGGCCTCGGAGTGGTATGTGAGAGGGAACTTACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp TCCCTCTCAGGCTGGGTCCCTTTAATTTTTGGCAGGTaGTCCCTGGGGCCTGGCCTCAACTGTGAAATGGGC +
Preference number: 6 (lower is better)
Translates to: SLSGWVPLIFGR*SLGPGLNCEMG
Trigger: GCCCATTTCACAGTTGAGGCCAGGCCCCAGGGAGCACCTGCCAAAAATTAAAGGGACCCAGCCTGAGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GCTTCTGAAGCTAACGTCAGAGTCTTACAGGATGGATaGAAAGGGGCCTCCAGGGACAGGGGCAGTTGGGCC +
Preference number: 6 (lower is better)
Translates to: ASEANVRVLQDG*KGASRDRGSWA
Trigger: GGCCCAACTGCCCCTGTCCCTGGAGGCCCCTTTCCATCCATCCTGTAAGACTCTGACGTTAGCTTCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp ACGCCATCCCGCAAGGGGGCCACCATCATCCACTTGTaGGCCCCAGGGTCGTATTTCTCCACTTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: TPSRKGATIIHL*APGSYFSTCFR
Trigger: CCTGAAACAAGTGGAGAAATACGACCCTGGGGCCAACAAGTGGATGATGGTGGCCCCCTTGCGGGATGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp CTGACGCCATCCCGCAAGGGGGCCACCATCATCCACTaGTTGGCCCCAGGGTCGTATTTCTCCACTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LTPSRKGATIIH*LAPGSYFSTCF
Trigger: GAAACAAGTGGAGAAATACGACCCTGGGGCCAACAAGTGGATGATGGTGGCCCCCTTGCGGGATGGCGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 72 bp ACGTATTCTCAGTGCTGGAAGGGAAACCCAGGCGGCTaGGTACTTGATTCGAATGGCCAGGCCGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: TYSQCWKGNPGG*VLDSNGQAAPV
Trigger: CACTGGGGCGGCCTGGCCATTCGAATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp TCGGTCTCCAGCTCATCACTCGAGATGAGGTCCAGCAGTGTGTCCTaGGACAGGCTGTTGAAGTCCTCGCTCTGCCTCACCGTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SVSSSSLEMRSSSVS*DRLLKSSLCLTVSK
Trigger: CTTTGAGACGGTGAGGCAGAGCGAGGACTTCAACAGCCTGTCCAAGGACACACTGCTGGACCTCATCTCGAGTGATGAGCTGGAGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CAA 90 bp TGTCCTTGGGCTGAGGTCTGTCCCCAGCTCTCCTGGTTCTGCAGCTaGCAGCCTATCATGGGACTTCTCAGCCTCTATCACCAAGTGAGC +
Preference number: 6 (lower is better)
Translates to: CPWAEVCPQLSWFCS*QPIMGLLSLYHQVS
Trigger: GCTCACTTGGTGATAGAGGCTGAGAAGTCCCATGATAGGCTGCAAGCTGCAGAACCAGGAGAGCTGGGGACAGACCTCAGCCCAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp GGACACATTACGTATTCTCAGTGCTGGAAGGGAAACCCAGGCGGCTaGGTACTTGATTCGAATGGCCAGGCCGCCCCAGTGAGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: GHITYSQCWKGNPGG*VLDSNGQAAPVSLC
Trigger: GCACAGACTCACTGGGGCGGCCTGGCCATTCGAATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGTAATGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp CTGTTGAAGTCCTCGCTCTGCCTCACCGTCTCAAAGTaGACCAGGCACATGCGCCAGGAGAACTCATACAGC +
Preference number: 6 (lower is better)
Translates to: LLKSSLCLTVSK*TRHMRQENSYS
Trigger: GCTGTATGAGTTCTCCTGGCGCATGTGCCTGGTGCACTTTGAGACGGTGAGGCAGAGCGAGGACTTCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS GCA 72 bp CCCTTTAAGTGGGGTACACCTCTCCATCCCACACAGTaGTGGGCCGTCTGTTCTCTGAAGGCTGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: PFKWGTPLHPTQ*WAVCSLKAALQ
Trigger: CTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGTGTACCCCACTTAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CCCCAAATCCCTTCAAGCTCCTCACAAGTGAGAAGCTaGGGTCACAGGGGCCCTAACCATCCTGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: PQIPSSSSQVRS*GHRGPNHPEML
Trigger: GAGCATCTCAGGATGGTTAGGGCCCCTGTGACCCCAGCTTCTCACTTGTGAGGAGCTTGAAGGGATTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp TCCCCACGTGCTCAAGTTGTTTCCAGATACAGAGGCTaGGTTCGGCGACTGAGAAGGCCCCCAAATCCCTTC +
Preference number: 6 (lower is better)
Translates to: SPRAQVVSRYRG*VRRLRRPPNPF
Trigger: GAAGGGATTTGGGGGCCTTCTCAGTCGCCGAACCCAGCCTCTGTATCTGGAAACAACTTGAGCACGTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp CCAGACGCCCGGGGACACATTACGTATTCTCAGTGCTaGAAGGGAAACCCAGGCGGCTTGGTACTTGATTCG +
Preference number: 6 (lower is better)
Translates to: PDARGHITYSQC*KGNPGGLVLDS
Trigger: CGAATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGTAATGTGTCCCCGGGCGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp GCCAGGCTCCTGTGTTCCCTCTCAGGCTGGGTCCCTTaGTTCCCTCTCAGGCTGGGTCCCTTTAATTTTTGG +
Preference number: 6 (lower is better)
Translates to: ARLLCSLSGWVP*FPLRLGPFNFW
Trigger: CCAAAAATTAAAGGGACCCAGCCTGAGAGGGAACAAAGGGACCCAGCCTGAGAGGGAACACAGGAGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp GCTGAGGTCTGTCCCCAGCTCTCCTGGTTCTGCAGCTaGCAGCCTATCATGGGACTTCTCAGCCTCTATCAC +
Preference number: 6 (lower is better)
Translates to: AEVCPQLSWFCS*QPIMGLLSLYH
Trigger: GTGATAGAGGCTGAGAAGTCCCATGATAGGCTGCAAGCTGCAGAACCAGGAGAGCTGGGGACAGACCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 90 bp CTCCATCCCACACAGTGCTGGGCCGTCTGTTCTCTGAAGGCTGCTTaGCAGGAATTCTGCCCTCCCCACGTGCTCAAGTTGTTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: LHPTQCWAVCSLKAA*QEFCPPHVLKLFPD
Trigger: ATCTGGAAACAACTTGAGCACGTGGGGAGGGCAGAATTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp ATGCTGACATGTGGTCCCTTCAGGGCAAGGCCTCACTaGTACCTGGAACTAAACAGCCACGCTACCTACCTG +
Preference number: 6 (lower is better)
Translates to: MLTCGPFRARPH*YLELNSHATYL
Trigger: CAGGTAGGTAGCGTGGCTGTTTAGTTCCAGGTAGCAGTGAGGCCTTGCCCTGAAGGGACCACATGTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp TACCCAGACGCCCGGGGACACATTACGTATTCTCAGTaGTGGAAGGGAAACCCAGGCGGCTTGGTACTTGAT +
Preference number: 6 (lower is better)
Translates to: YPDARGHITYSQ*WKGNPGGLVLD
Trigger: ATCAAGTACCAAGCCGCCTGGGTTTCCCTTCCAGCACTGAGAATACGTAATGTGTCCCCGGGCGTCTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp AGCACTGGACCTTGGACACCATGTCCCGGTGGATGCTaGTTCCTCCGAAAACAAAGAGCTTCAGCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: STGPWTPCPGGC*FLRKQRASAWH
Trigger: GTGCCAAGCTGAAGCTCTTTGTTTTCGGAGGAACCAGCATCCACCGGGACATGGTGTCCAAGGTCCAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp CTGCGCCTTAAAGGGCCTGGAGTACGGGGTGCCCAGTaGGAGAGAAAGAGAGAGAAGGAGAGAATGTTCACA +
Preference number: 6 (lower is better)
Translates to: LRLKGPGVRGAQ*ERKREKERMFT
Trigger: TGTGAACATTCTCTCCTTCTCTCTCTTTCTCTCCCACTGGGCACCCCGTACTCCAGGCCCTTTAAGGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp AGGAGAGAATGTACTGTACTGTCCCTCCTGCAGCAGTaGCGGAGCCCACAGTGGATTAATGAGCTCGGCCTT +
Preference number: 6 (lower is better)
Translates to: RRECTVLSLLQQ*RSPQWINELGL
Trigger: AAGGCCGAGCTCATTAATCCACTGTGGGCTCCGTCACTGCTGCAGGAGGGACAGTACAGTACATTCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp CATAGCACTGGACCTTGGACACCATGTCCCGGTGGATaGTGGTTCCTCCGAAAACAAAGAGCTTCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: HSTGPWTPCPGG*WFLRKQRASAW
Trigger: CCAAGCTGAAGCTCTTTGTTTTCGGAGGAACCAGCATCCACCGGGACATGGTGTCCAAGGTCCAGTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337975.6
CDS CCA 72 bp TTTAAGTGGGGTACACCTCTCCATCCCACACAGTGCTaGGCCGTCTGTTCTCTGAAGGCTGCTTTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: FKWGTPLHPTQC*AVCSLKAALQE
Trigger: TTCCTGCAAAGCAGCCTTCAGAGAACAGACGGCCCAGCACTGTGTGGGATGGAGAGGTGTACCCCACTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp AAGTTGTTTCCAGATACAGAGGCTGGGTTCGGCGACTaGGAAGGCCCCCAAATCCCTTCAAGCTCCTCACAA +
Preference number: 6 (lower is better)
Translates to: KLFPDTEAGFGD*EGPQIPSSSSQ
Trigger: TTGTGAGGAGCTTGAAGGGATTTGGGGGCCTTCTCAGTCGCCGAACCCAGCCTCTGTATCTGGAAACAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS GCA 72 bp AGGTTTCTTTCTTCTGGAGCTAGGTTGCTCTTTTCCTaGCATCGGGCATCAGAGCTCCAGGTTCTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RFLSSGARLLFS*HRASELQVLWP
Trigger: AGGCCAGAGAACCTGGAGCTCTGATGCCCGATGGCAGGAAAAGAGCAACCTAGCTCCAGAAGAAAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CCA 72 bp GGGCAGGGGCCCTGGTGGAATAAAAAGCTAAGGAAATaGGGACTCAGGTTTCTTTCTTCTGGAGCTAGGTTG +
Preference number: 6 (lower is better)
Translates to: GQGPWWNKKLRK*GLRFLSSGARL
Trigger: CAACCTAGCTCCAGAAGAAAGAAACCTGAGTCCCCATTTCCTTAGCTTTTTATTCCACCAGGGCCCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS CAA 72 bp AAATGGGGACTCAGGTTTCTTTCTTCTGGAGCTAGGTaGCTCTTTTCCTGCCATCGGGCATCAGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: KWGLRFLSSGAR*LFSCHRASELQ
Trigger: CTGGAGCTCTGATGCCCGATGGCAGGAAAAGAGCAACCTAGCTCCAGAAGAAAGAAACCTGAGTCCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp ATGCACTCCATAAGGCAAGGAGCCTCAGCAAAGCAGTaGTTAATGGTGACGCTGTCCGCGGTTTTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: MHSIRQGASAKQ*LMVTLSAVFGF
Trigger: AAAGCCAAAAACCGCGGACAGCGTCACCATTAATCACTGCTTTGCTGAGGCTCCTTGCCTTATGGAGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536947.2
CDS TCA 72 bp AGCCTATCATGGGACTTCTCAGCCTCTATCACCAAGTaGGCCAATTCCCCTAATAGAGTAAGTTCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: SLSWDFSASITK*ANSPNRVSSLS
Trigger: TGAGAGGGAACTTACTCTATTAGGGGAATTGGCTCACTTGGTGATAGAGGCTGAGAAGTCCCATGATAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536947.2