Pregenerated sensors for KLHL23 (Homo sapiens)
Ensembl gene IDs: ENSG00000213160Ensembl transcript IDs: ENST00000272797.8, ENST00000392647.7, ENST00000437875.1, ENST00000448589.1, ENST00000494387.1, ENST00000498202.6, ENST00000602521.1
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACACATCCCAACTATTCCCAAGTTATGGCACACATGGAAAGCGATaGTGTAGGCACACTGAGGAAAATGGACAAAGGTGGTTCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: NTSQLFPSYGTHGKR*CRHTEENGQRWFWP Trigger: GGGCCAGAACCACCTTTGTCCATTTTCCTCAGTGTGCCTACAGCATCGCTTTCCATGTGTGCCATAACTTGGGAATAGTTGGGATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR TCA 90 bp | TTCATTCTTAGACTCAGTGAACCATGCTATCCAGGTTCCAGGCCTTaGAATTCATTTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: FILRLSEPCYPGSRP*NSFDVHSQAGSYFL Trigger: CAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAATTTCAAGGCCTGGAACCTGGATAGCATGGTTCACTGAGTCTAAGAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR CAA 90 bp | GACTCAGTGAACCATGCTATCCAGGTTCCAGGCCTTGAAATTCATTaGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTGCACG | + |
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Preference number: 2 (lower is better) Translates to: DSVNHAIQVPGLEIH*MSTVRQVPIFCGCT Trigger: CGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAATTTCAAGGCCTGGAACCTGGATAGCATGGTTCACTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR CAA 90 bp | ATTGCCTCCCTTGTATGTCCCAGAATACACATAAAGTTTGCATTCTaGCCAGCTCTGCACAGCAAACTATCTACTAGGTCAAAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IASLVCPRIHIKFAF*PALHSKLSTRSKRQ Trigger: CTGCCTCTTTGACCTAGTAGATAGTTTGCTGTGCAGAGCTGGCAAGAATGCAAACTTTATGTGTATTCTGGGACATACAAGGGAGGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR-3UTR TCA 90 bp | ATAAAGTTTGCATTCTTGCCAGCTCTGCACAGCAAACTATCTACTAGGTCAAAGCCAGGTTCCAGGCCTTaGAATTCATTTGATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: IKFAFLPALHSKLSTRSKPGSRP*NSFDVH Trigger: GTGGACATCAAATGAATTTCAAGGCCTGGAACCTGG...CTTTGACCTAGTAGATAGTTTGCTGTGCAGAGCTGGCAAGAATGCAAACTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTCACAACTGCTCTACATaGTTTCTGGCTCTAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: PVCMAQEALIKERLNDLSHNCST*FLALKF Trigger: GAATTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTG...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR CAA 90 bp | CCAGCCAGACATCTTAATATGCACTATCTACTATATTATAGGCTCTaGAGAAACATTTCATTCCACAGAATGGTTCTGATTTATCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PARHLNMHYLLYYRL*RNISFHRMVLIYPQ Trigger: CTGGGGATAAATCAGAACCATTCTGTGGAATGAAATGTTTCTCAAGAGCCTATAATATAGTAGATAGTGCATATTAAGATGTCTGGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCGGAATTACAATTTACTaGTCCCCTATCATGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVGITIY*SPIMCQ Trigger: CTGGCACATGATAGGGGATCAGTAAATTGTAATTCC...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR-3UTR TCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGTCCACAGAATGGTTCTaGTTTATCCCCAGTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VTKSSYWQLWEINANIFLSTEWF*FIPSVD Trigger: ATCAACACTGGGGATAAATCAGAACCATTCTGTGGA...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGATGAATCACCATGTTTaGGAGTACAGTAGGGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VTKSSYWQLWEINANIFLMNHHV*EYSRVR Trigger: CCTAACCCTACTGTACTCCCAAACATGGTGATTCAT...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR CAA 90 bp | GAAGTAGAATTTATGGGGCAAAGGATATGGTCATTTTTACAGCCCTaGCTATGTAGTACCATATTGTGTTTCCAAAGGGTTGTATCTATT | + |
|
Preference number: 2 (lower is better) Translates to: EVEFMGQRIWSFLQP*LCSTILCFQRVVSI Trigger: AATAGATACAACCCTTTGGAAACACAATATGGTACTACATAGCAAGGGCTGTAAAAATGACCATATCCTTTGCCCCATAAATTCTACTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR CCA 72 bp | CGATGCTGTAGGCACACTGAGGAAAATGGACAAAGGTaGTTCTGGCCCAGAGGCTCCAGCCACCCAGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RCCRHTEENGQR*FWPRGSSHPGH Trigger: GTGGCCTGGGTGGCTGGAGCCTCTGGGCCAGAACCACCTTTGTCCATTTTCCTCAGTGTGCCTACAGCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR TCA 72 bp | AGACTCAGTGAACCATGCTATCCAGGTTCCAGGCCTTaGAATTCATTTGATGTCCACAGTCAGGCAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: RLSEPCYPGSRP*NSFDVHSQAGS Trigger: GGAACCTGCCTGACTGTGGACATCAAATGAATTTCAAGGCCTGGAACCTGGATAGCATGGTTCACTGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR GCA 72 bp | CAACTATTCCCAAGTTATGGCACACATGGAAAGCGATaGTGTAGGCACACTGAGGAAAATGGACAAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: QLFPSYGTHGKR*CRHTEENGQRW Trigger: CCACCTTTGTCCATTTTCCTCAGTGTGCCTACAGCATCGCTTTCCATGTGTGCCATAACTTGGGAATAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR TCA 72 bp | ACCATGCTATCCAGGTTCCAGGCCTTGAAATTCATTTaGTGTCCACAGTCAGGCAGGTTCCTATTTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TMLSRFQALKFI*CPQSGRFLFSV Trigger: CACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAATTTCAAGGCCTGGAACCTGGATAGCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTGATTTATCCCCAGTGTaGATGCTACCAAGAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: PVCMAQEALIKERLNDLSDLSPV*MLPRGK Trigger: TTTTCCTCTTGGTAGCATCAACACTGGGGATAAATC...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR TCA 72 bp | CATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATaGCTTAAGTCACAAAATCTAGTTACTGGCAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: HGSGSSNQGEVK*LKSQNLVTGSF Trigger: AAAGCTGCCAGTAACTAGATTTTGTGACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR GCA 72 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATaGTTTCTGGCTCTAAAATTCAATCATATATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VSVFSTNHNCST*FLALKFNHICR Trigger: TCTGCATATATGATTGAATTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CTCCCTGCCTTCTATATTCCCAGTTATATCAGCTCAGAAACAACTTATACTACCGGGCAGGCCTGGATGTaGACTGGAGGTGATGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPAFYIPSYISSETTYTTGQAWM*TGGDEA Trigger: AGCCTCATCACCTCCAGTCCACATCCAGGCCTGCCC...GGTAGTATAAGTTGTTTCTGAGCTGATATAACTGGGAATATAGAAGGCAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| CDS-3UTR TCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGCGCCTCCGGCCCCTCTaGCCATCTTTGGAAGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLRLRPL*PSLEEA Trigger: CGCCTCTTCCAAAGATGGTCAGAGGGGCCGGAGGCG...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR GCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTGTCTGTGATTTGCAGTaGCAGTGTGCATGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSVCDLQ*QCAWLR Trigger: CCTGAGCCATGCACACTGGCACTGCAAATCACAGAC...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR GCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTGGCCTGTCTGTGATTTaGAGTGCCAGTGTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLGLSVI*SASVHG Trigger: GCCATGCACACTGGCACTGCAAATCACAGACAGGCC...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTACCCATGAGACCGCATaGCACTGGGAAGATTACCCA | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSTHETA*HWEDYP Trigger: TGGGTAATCTTCCCAGTGCCATGCGGTCTCATGGGT...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | ATTCATTTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTGCACGGCATCAGACCATAGAATCTaGCCTAGGTTTGGGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: IHLMSTVRQVPIFCGCTASDHRI*PRFGEW Trigger: CCATTCCCCAAACCTAGGCCAGATTCTATGGTCTGA...TGCCGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| CDS-3UTR TCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTGGTAATACCTGGCATTaGGCATTGGCAAACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSGNTWH*ALANLL Trigger: CAGAAGGTTTGCCAATGCTCAATGCCAGGTATTACC...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR GCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTTTTGCAGTGCCAGTGTaGATGGCTCAGGAAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLFAVPV*MAQEAL Trigger: TAGAGCTTCCTGAGCCATGCACACTGGCACTGCAAA...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGAAGCAGCTCCTATTTTaGTGTCCCGGCGGCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLKQLLF*CPGGSP Trigger: GGGGGAGCCGCCGGGACACCAAAATAGGAGCTGCTT...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGGGACAAAGGTGGTTCTaGCCCAGAGGCTCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLGQRWF*PRGSSH Trigger: GTGGCTGGAGCCTCTGGGCCAGAACCACCTTTGTCC...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | ATAAAGTTTGCATTCTTGCCAGCTCTGCACAGCAAACTATCTACTAGGTCAAAGTTTTGTGGGCAGGCCTaGATGTGGACTGGAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: IKFAFLPALHSKLSTRSKFCGQA*MWTGGD Trigger: ATCACCTCCAGTCCACATCCAGGCCTGCCCACAAAA...CTTTGACCTAGTAGATAGTTTGCTGTGCAGAGCTGGCAAGAATGCAAACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| CDS-3UTR TCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTAGTTCTGGACACACATaGAATTCTGCAAAGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSSSGHT*NSAKEC Trigger: GCACTCCTTTGCAGAATTTCATGTGTGTCCAGAACT...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR TCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAACACAGCCACCCAAGGTaGCTGCACAGTGGTAATACC | + |
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Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKHSHPR*LHSGNT Trigger: GGTATTACCACTGTGCAGTCACCTTGGGTGGCTGTG...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR GCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTGAACTTTGTCATAGGTaGAGCTTCCTCTGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLELCHR*SFLCSH Trigger: GTGGCTACAGAGGAAGCTGCACCTATGACAAAGTTC...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTGTGGCTGTGGACCTCTaGGAAATCTCTTTATGCATG | + |
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Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLVAVDL*EISLCM Trigger: CATGCATAAAGAGATTTCCCAGAGGTCCACAGCCAC...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGCTCAGCCTCTTCTGCTaGAGCCCCTTTTCTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRLSLFC*SPFSVT Trigger: GGTTACAGAAAAGGGGCTCCAGCAGAAGAGGCTGAG...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTGCACAATCCATATTCTaGATGTGGACTGGAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSAQSIF*MWTGGD Trigger: ATCACCTCCAGTCCACATCCAGAATATGGATTGTGC...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCCCCTCTGACCATCTTTaGAAGAGGCGCTCGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVPSDHL*KRRSEA Trigger: GGCTTCCGAGCGCCTCTTCCAAAGATGGTCAGAGGG...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGGAAAATGGACAAAGGTaGTTCTGGCCCAGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRENGQR*FWPRGS Trigger: GGAGCCTCTGGGCCAGAACCACCTTTGTCCATTTTC...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| 3UTR CAA 72 bp | AACCATGCTATCCAGGTTCCAGGCCTTGAAATTCATTaGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NHAIQVPGLEIH*MSTVRQVPIFC Trigger: ACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAATTTCAAGGCCTGGAACCTGGATAGCATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| CDS-3UTR TCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTGCTAAAACGGCTCGGTaGCAATGGAAAATTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLAKTAR*QWKIMP Trigger: AGGCATAATTTTCCATTGTCACCGAGCCGTTTTAGC...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR TCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGACACAAACACACCCATaGGACCGCATGGCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLTQTHP*DRMALG Trigger: TCCCAGTGCCATGCGGTCTCATGGGTGTGTTTGTGT...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR TCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTATTTATCCCCAGTGTTaGTGCTACCAAGAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSIYPQC*CYQEEK Trigger: CTTTTCCTCTTGGTAGCATCAACACTGGGGATAAAT...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR TCA 90 bp | AATTCATTTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTGCACGGCTGGTTTAGTTTTGGATaGACTAAGAAGCAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NSFDVHSQAGSYFLWLHGWFSFG*TKKQSK Trigger: TTTGCTCTGCTTCTTAGTTCATCCAAAACTAAACCA...GCCGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448589.1 |
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| CDS-3UTR GCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCGCCACCCAAGGTGACTaGACAGTGGTAATACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVATQGD*TVVIPG Trigger: GCCAGGTATTACCACTGTGCAGTCACCTTGGGTGGC...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR GCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGGAACTCAGCCTCTTCTaGTGGAGCCCCTTTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRELSLF*WSPFSV Trigger: TACAGAAAAGGGGCTCCAGCAGAAGAGGCTGAGTTC...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTATGAATCACCATGTTTaGGAGTACAGTAGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSMNHHV*EYSRVR Trigger: CCTAACCCTACTGTACTCCCAAACATGGTGATTCAT...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR TCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTCTTCTTTCCAAACACTaGGATTCTTTCTGGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSLLSKH*DSFWTR Trigger: TCTTGTCCAGAAAGAATCTCAGTGTTTGGAAAGAAG...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTATGGGGCAAAGGATATaGTCATTTTTACAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLMGQRI*SFLQPL Trigger: CAAGGGCTGTAAAAATGACCATATCCTTTGCCCCAT...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTCGATTTTCTACATCATaGGCAGTCCACTTAATAACT | + |
|
Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSRFSTS*AVHLIT Trigger: AGTTATTAAGTGGACTGCTCATGATGTAGAAAATCG...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTATTTTCAAACGGAACTaGGCACAATCCATATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLIFKRN*AQSIFW Trigger: CCAGAATATGGATTGTGCTCAGTTCCGTTTGAAAAT...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTAGGAGTATCCTCCAGTaGCATAAATACATCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLRSILQ*HKYIHS Trigger: TGAATGGATGTATTTATGTCACTGGAGGATACTCCT...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGAAGATACGTTCCCTTTaGGTAGGAGTATCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRKIRSL*VGVSSS Trigger: ACTGGAGGATACTCCTACTCAAAGGGAACGTATCTT...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTCACAACTGCTCTACATaGTTTCTGGCTCTAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLHNCST*FLALKF Trigger: GAATTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTG...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAAACACATGGAAAGCGATaGTGTAGGCACACTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKTHGKR*CRHTEE Trigger: TTCCTCAGTGTGCCTACAGCATCGCTTTCCATGTGT...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTATGCCTGAAGGACACTaGAGAGTAATATCAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVDATKRKRFTTKVVHLMPEGH*RVISVN Trigger: ATTTACTGATATTACTCTTCAGTGTCCTTCAGGCAT...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGCATGGCTCAGGAAGCTCTAATCAAGGAGAGGTTAAATGACTTAAGTAATTTGGGAAGTGTATaGATAATTTACAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVCMAQEALIKERLNDLSNLGSV*IIYKAF Trigger: GAAGGCCTTGTAAATTATGCATACACTTCCCAAATT...ACTTAAGTCATTTAACCTCTCCTTGATTAGAGCTTCCTGAGCCATGCACACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGTATACATTGTGGCTGTaGACCTCTGGGAAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRYTLWL*TSGKSL Trigger: AAGAGATTTCCCAGAGGTCCACAGCCACAATGTATA...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGCTCCCTGGTATAATCTaGTATTTCTGCTCCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRLPGII*YFCSLN Trigger: ATTCAGGGAGCAGAAATACCAGATTATACCAGGGAG...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGCACCATAGCTCTCCCTaGTATAATCTGGTATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRHHSSP*YNLVFL Trigger: CAGAAATACCAGATTATACCAGGGAGAGCTATGGTG...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCCCTGGCATTGAGCATTaGCAAACCTTCTGTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVPGIEH*QTFCPF Trigger: GAATGGACAGAAGGTTTGCCAATGCTCAATGCCAGG...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGGAGACCGCATGGCACTaGGAAGATTACCCACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLETAWH*EDYPLF Trigger: AAATAGTGGGTAATCTTCCCAGTGCCATGCGGTCTC...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGGGATCTTATTTTCGGTaGGCAGGCAGCTTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLGSYFR*AGSFFE Trigger: TTCAAAGAAGCTGCCTGCTCACCGAAAATAAGATCC...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAAGGAATTACAATTTACTaGTCCCCTATCATGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKGITIY*SPIMCQ Trigger: CTGGCACATGATAGGGGATCAGTAAATTGTAATTCC...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAATCCACAGAATGGTTCTaGTTTATCCCCAGTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKSTEWF*FIPSVD Trigger: ATCAACACTGGGGATAAATCAGAACCATTCTGTGGA...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAAACTATTCCCAAGTTATaGCACACATGGAAAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKTIPKL*HTWKAM Trigger: CATCGCTTTCCATGTGTGCCATAACTTGGGAATAGT...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCCCTTCCAGAATATCATaGTGGATGCCAGAGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVPSRIS*WMPESF Trigger: AAAACTCTCTGGCATCCACCATGATATTCTGGAAGG...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAAATGGAAAATTATGCCTaGAGGACACTGAAGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFSTNHNCSTCFLALKMENYA*RTLKSN Trigger: ATTACTCTTCAGTGTCCTTCAGGCATAATTTTCCAT...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGTATTTCTCAATGCTCTaGAGATACGTTCCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLYFSML*RYVPFE Trigger: CTCAAAGGGAACGTATCTTCAGAGCATTGAGAAATA...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGTGGGAAATCTCTTTATaGATGGGATTCAAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLWEISL*MGFKAL Trigger: CAATGCCTTGAATCCCATGCATAAAGAGATTTCCCA...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGTCTACTAATCACAACTaGTCTACATGCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLSTNHN*STCFLA Trigger: AGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGA...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCGCCTCAAGCAGGCTTTaGACATTTCTTTTAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVASSRL*TFLLVI Trigger: AATAACTAAAAGAAATGTTCAAAGCCTGCTTGAGGC...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCTTATCAATATCCAAGTaGCTTACCAAAAACCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVLSISK*LTKNRS Trigger: TGAGCGGTTTTTGGTAAGGCACTTGGATATTGATAA...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGGATCATATTTCTCAATaGTCTGAAGATACGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLDHISQ*SEDTFP Trigger: AGGGAACGTATCTTCAGAGCATTGAGAAATATGATC...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGTCCAGAATATCATGGTaGATGCCAGAGAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLSRISW*MPESFI Trigger: AATAAAACTCTCTGGCATCCACCATGATATTCTGGA...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGAGTCCACTTAATAACTaGCTCTATGATAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTKSSYWQLWEINANIFLSPLNN*LYDSFF Trigger: GAAGAAGCTATCATAGAGCCAGTTATTAAGTGGACT...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| 3UTR CAA 72 bp | CCTTGCTATGTAGTACCATATTGTGTTTCCAAAGGGTaGTATCTATTTAAAACGCCATCTGAAATAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCYVVPYCVSKG*YLFKTPSEINA Trigger: TGCATTTATTTCAGATGGCGTTTTAAATAGATACAACCCTTTGGAAACACAATATGGTACTACATAGCAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCATAATCTGGTATTTCTaGTCCCTGAATCCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVIIWYF*SLNPNI Trigger: AATGTTTGGATTCAGGGAGCAGAAATACCAGATTAT...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCAGTTACTGGCAGCTTTaGGAAATAAATGCAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVSYWQL*EINANI Trigger: GATATTTGCATTTATTTCCCAAAGCTGCCAGTAACT...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS TCA 90 bp | CCGCGGGCTAGTAGCGAGCGGGAGCGGGGACGCCTCCGGCCCCTCTaGCCATCTTTGGAAGAGGCGCTCGGAAGCCGCCAGCTAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PRASSERERGRLRPL*PSLEEALGSRQLVP Trigger: CGGCACTAGCTGGCGGCTTCCGAGCGCCTCTTCCAAAGATGGTCAGAGGGGCCGGAGGCGTCCCCGCTCCCGCTCGCTACTAGCCCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTCAAGCAGCTCCTATTTaGGTGTCCCGGCGGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVDATKRKRFTTKVVHLQAAPI*VSRRLP Trigger: GGGGAGCCGCCGGGACACCAAAATAGGAGCTGCTTG...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTGCACGGCAGGGCCTGAATCTGGCCTAGGTTaGGGGAATGGAGAGAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMSTVRQVPIFCGCTAGPESGLG*GNGENK Trigger: TTTATTCTCTCCATTCCCCAAACCTAGGCCAGATTC...AGGCCCTGCCGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448589.1 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTGCACGGCAGGGCCTATAAAGTTTGCATTCTaGCCAGCTCTGCACAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMSTVRQVPIFCGCTAGPIKFAF*PALHSK Trigger: TTTGCTGTGCAGAGCTGGCAAGAATGCAAACTTTAT...AGGCCCTGCCGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448589.1 |
||
| CDS GCA 90 bp | ATTCATTTGATGTCCACAGTCAGGCAGGTTCCTATTTTCTGTGGCTaGACGGCAGGGCCTAGGAATTTTTCACCTCATCTTCTTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHLMSTVRQVPIFCG*TAGPRNFSPHLLVV Trigger: AACCACAAGAAGATGAGGTGAAAAATTCCTAGGCCCTGCCGTGCAGCCACAGAAAATAGGAACCTGCCTGACTGTGGACATCAAATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448589.1 |
||
| CDS CCA 90 bp | GCCACCCAAGGTGACTGCACAGTGGTAATACCTGGCATTGAGCATTaGCAAACCTTCTGTCCATTCATCACTTTCACTGTTATAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ATQGDCTVVIPGIEH*QTFCPFITFTVIDP Trigger: TGGATCTATAACAGTGAAAGTGATGAATGGACAGAAGGTTTGCCAATGCTCAATGCCAGGTATTACCACTGTGCAGTCACCTTGGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
||
| CDS-3UTR CAA 90 bp | AGTTTGCATTCTTGCCAGCTCTGCACAGCAAACTATCTACTAGGTCAAAGAGGCAAATGTTGCTTCCCATaGCCTCCCTTGTATGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLHSCQLCTANYLLGQRGKCCFP*PPLYVP Trigger: TGGGACATACAAGGGAGGCAATGGGAAGCAACATTT...GCCTCTTTGACCTAGTAGATAGTTTGCTGTGCAGAGCTGGCAAGAATGCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
||
| CDS-3UTR CAA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGCCACCCAGGCCACCTTaGGATGTAGCAAGGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTKSSYWQLWEINANIFLPPRPP*DVARGE Trigger: CTCACCCCTTGCTACATCCAAAGGTGGCCTGGGTGG...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCCCTGCCTTCTATATTCCCAGTTATATCAGCTCAGAAACAACTTATACTTCCCATTGCCTCCCTaGTATGTCCCAGAATACACA | + |
|
Preference number: 5 (lower is better) Translates to: QAPCLLYSQLYQLRNNLYFPLPP*YVPEYT Trigger: TGTGTATTCTGGGACATACAAGGGAGGCAATGGGAA...GTATAAGTTGTTTCTGAGCTGATATAACTGGGAATATAGAAGGCAGGGAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448589.1 |
||
| CDS TCA 90 bp | TGGGATTCAAGGCATTGTATATTAGGGAGCGGATCTTATTTTCGGTaGGCAGGCAGCTTCTTTGAAGGCCTAAGGCTGTTTTTAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: WDSRHCILGSGSYFR*AGSFFEGLRLFLST Trigger: TGTACTTAAAAACAGCCTTAGGCCTTCAAAGAAGCTGCCTGCTCACCGAAAATAAGATCCGCTCCCTAATATACAATGCCTTGAATCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
||
| CDS GCA 90 bp | TTTGTGCTCTTAAGAGAGGGTGAGACGTGCACACAAACACAGCCATaGACCACGCACAATGATCTCCATAAAATTATAATGGAGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FVLLREGETCTQTQP*TTHNDLHKIIMEWK Trigger: TTTCCACTCCATTATAATTTTATGGAGATCATTGTGCGTGGTGCATGGCTGTGTTTGTGTGCACGTCTCACCCTCTCTTAAGAGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494387.1 |
||
| CDS CCA 90 bp | TCAAATAGAAAATGCTCCTACGTACCAAGTTTTCTTCCCTGGATGTaGACTGGAGGTGATGAGGCTCCATTCGTTGATATCGGAATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SNRKCSYVPSFLPWM*TGGDEAPFVDIGIV Trigger: TACAATTCCGATATCAACGAATGGAGCCTCATCACCTCCAGTCCACATCCAGGGAAGAAAACTTGGTACGTAGGAGCATTTTCTATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437875.1 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTATGGGATTCAAGGCATaGTATATTAGGGAGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSVDATKRKRFTTKVVHLMGFKA*YIRERI Trigger: GATCCGCTCCCTAATATACAATGCCTTGAATCCCAT...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCAGGCCTGTCTGTGATTaGCAGTGCCAGTGTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVRPVCD*QCQCAW Trigger: CCATGCACACTGGCACTGCAAATCACAGACAGGCCT...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
||
| CDS-3UTR CAA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGGAAGATACGTTCCCTTaGAGTAGGAGTATCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRFFLTMNHHVWEYSRVREDTFP*SRSILQ Trigger: CTGGAGGATACTCCTACTCAAAGGGAACGTATCTTC...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS TCA 90 bp | TATATTAGGGAGCGGATCTTATTTTCGGTGAGCAGGCAGCTTCTTTaGAGGCCTAAGGCTGTTTTTAAGTACACTGGATCTATATCAATG | + |
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Preference number: 5 (lower is better) Translates to: YIRERILFSVSRQLL*RPKAVFKYTGSISM Trigger: CATTGATATAGATCCAGTGTACTTAAAAACAGCCTTAGGCCTTCAAAGAAGCTGCCTGCTCACCGAAAATAAGATCCGCTCCCTAATATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CCA 90 bp | TTATATACATTGTGGCTGTGGACCTCTGGGAAATCTCTTTATGCATaGGATTCAAGGCATTGTATATTAGGGAGCGGATCTTATTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: LYTLWLWTSGKSLYA*DSRHCILGSGSYFR Trigger: CCGAAAATAAGATCCGCTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CCA 90 bp | ATAAAGGATGCCAGTAATAGCCTCCAATTATATACATTGTGGCTGTaGACCTCTGGGAAATCTCTTTATGCATGGGATTCAAGGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: IKDASNSLQLYTLWL*TSGKSLYAWDSRHC Trigger: ACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAATTGGAGGCTATTACTGGCATCCTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTCCTGAATCCAAACATTaGTCAAAGGATCCCATATGT | + |
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Preference number: 5 (lower is better) Translates to: PSVDATKRKRFTTKVVHLPESKH*SKDPIC Trigger: ACATATGGGATCCTTTGACAAATGTTTGGATTCAGG...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS GCA 90 bp | CCAATTATATACATTGTGGCTGTGGACCTCTGGGAAATCTCTTTATaGATGGGATTCAAGGCATTGTATATTAGGGAGCGGATCTTATTT | + |
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Preference number: 5 (lower is better) Translates to: PIIYIVAVDLWEISL*MGFKALYIRERILF Trigger: AAATAAGATCCGCTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTTGATGCTACCAAGAGGAAAAGATTCACTACAAAGGTAGTTCACCTTTGCCTCAAGCAGGCTTaGAACATTTCTTTTAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: PSVDATKRKRFTTKVVHLCLKQA*NISFSY Trigger: ATAACTAAAAGAAATGTTCAAAGCCTGCTTGAGGCA...AAGGTGAACTACCTTTGTAGTGAATCTTTTCCTCTTGGTAGCATCAACACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCCTCCAATTATATACATaGTGGCTGTGGACCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVLQLYT*WLWTSG Trigger: CCCAGAGGTCCACAGCCACAATGTATATAATTGGAG...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGGATTTATCCCCAGTGTaGATGCTACCAAGAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRDLSPV*MLPRGK Trigger: TTTTCCTCTTGGTAGCATCAACACTGGGGATAAATC...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS GCA 90 bp | AATTCTGCAAAGGAGTGCATTCCAATACAATTATCAATATCCAAGTaGCTTACCAAAAACCGCTCACAAGCCTTCTTTACTGAAAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: NSAKECIPIQLSISK*LTKNRSQAFFTERN Trigger: GTTCCTTTCAGTAAAGAAGGCTTGTGAGCGGTTTTTGGTAAGGCACTTGGATATTGATAATTGTATTGGAATGCACTCCTTTGCAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000272797.8 ENST00000392647.7 |
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| CDS TCA 90 bp | AAGATCTGGATCATATTTCTCAATGCTCTGAAGATACGTTCCCTTTaGGTAGGAGTATCCTCCAGTGACATAAATACATCCATTCATGAT | + |
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Preference number: 5 (lower is better) Translates to: KIWIIFLNALKIRSL*VGVSSSDINTSIHD Trigger: ATCATGAATGGATGTATTTATGTCACTGGAGGATACTCCTACTCAAAGGGAACGTATCTTCAGAGCATTGAGAAATATGATCCAGATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000498202.6 ENST00000602521.1 |
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| CDS CCA 90 bp | AATGTCCTATCACCTAGTGATACTGTGGTAGCTGTTTTAAAGACATaGCATAAAGCATTCTCATGTGTTTCTGGTGATGCTGTTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: NVLSPSDTVVAVLKT*HKAFSCVSGDAVVN Trigger: ATTTACAACAGCATCACCAGAAACACATGAGAATGCTTTATGCCATGTCTTTAAAACAGCTACCACAGTATCACTAGGTGATAGGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494387.1 |
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| CDS-3UTR CAA 90 bp | AAAGTGTTAAGGGTTGATTTTGTAGAGGTAGAGAAGATTCCCTCTTTAAATGTCCTCTCTCCATTCATTTaGTTCAGGGTCATAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: KVLRVDFVEVEKIPSLNVLSPFI*FRVIAF Trigger: GAATGCTATGACCCTGAACAAAATGAATGGAGAGAG...GACATTTAAAGAGGGAATCTTCTCTACCTCTACAAAATCAACCCTTAACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGTCATTTTTACAGCCCTaGCTATGTAGTACCATATTG | + |
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Preference number: 5 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRSFLQP*LCSTIL Trigger: CAATATGGTACTACATAGCAAGGGCTGTAAAAATGA...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | ATAAGATTTTTCTTGACCATGAATCACCATGTTTGGGAGTACAGTAGGGTTAGGCACAATGAATTTGTTTaGCAGATTACCTTCCACATG | + |
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Preference number: 5 (lower is better) Translates to: IRFFLTMNHHVWEYSRVRHNEFV*QITFHM Trigger: CATGTGGAAGGTAATCTGCAAAACAAATTCATTGTG...CCTAACCCTACTGTACTCCCAAACATGGTGATTCATGGTCAAGAAAAATCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS CCA 90 bp | GCATTCAATTCGATTTTCTACATCATGAGCAGTCCACTTAATAACTaGCTCTATGATAGCTTCTTCTTTCCAAACACTGAGATTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: AFNSIFYIMSSPLNN*LYDSFFFPNTEILS Trigger: AGAAAGAATCTCAGTGTTTGGAAAGAAGAAGCTATCATAGAGCCAGTTATTAAGTGGACTGCTCATGATGTAGAAAATCGAATTGAATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS-3UTR CAA 90 bp | GTCAGTGTATTTTCTACTAATCACAACTGCTCTACATGCTTTCTGGCTCTAAAACTTTTGCACAGTATTTaGTATATCTCTGGTAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: VSVFSTNHNCSTCFLALKLLHSI*YISGSQ Trigger: CTGACTACCAGAGATATACAAAATACTGTGCAAAAG...TTTTAGAGCCAGAAAGCATGTAGAGCAGTTGTGATTAGTAGAAAATACACTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGCAGAAATTCTTCTTGTaGCCACACTTCCTTAAACTT | + |
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Preference number: 5 (lower is better) Translates to: VTKSSYWQLWEINANIFLQKFFL*PHFLKL Trigger: AAGTTTAAGGAAGTGTGGCAACAAGAAGAATTTCTG...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS-3UTR CAA 90 bp | GTCACAAAATCTAGTTACTGGCAGCTTTGGGAAATAAATGCAAATATCTTCTTGCTATGTAGTACCATATaGTGTTTCCAAAGGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: VTKSSYWQLWEINANIFLLCSTI*CFQRVV Trigger: TACAACCCTTTGGAAACACAATATGGTACTACATAG...CAAGAAGATATTTGCATTTATTTCCCAAAGCTGCCAGTAACTAGATTTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS TCA 72 bp | AGTAGCGAGCGGGAGCGGGGACGCCTCCGGCCCCTCTaGCCATCTTTGGAAGAGGCGCTCGGAAGCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSERERGRLRPL*PSLEEALGSRQ Trigger: CTGGCGGCTTCCGAGCGCCTCTTCCAAAGATGGTCAGAGGGGCCGGAGGCGTCCCCGCTCCCGCTCGCTACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392647.7 |
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| CDS CAA 90 bp | GCTGTGGACCTCTGGGAAATCTCTTTATGCATGGGATTCAAGGCATaGTATATTAGGGAGCGGATCTTATTTTCGGTGAGCAGGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: AVDLWEISLCMGFKA*YIRERILFSVSRQL Trigger: AAGCTGCCTGCTCACCGAAAATAAGATCCGCTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS TCA 72 bp | AGGCATTGTATATTAGGGAGCGGATCTTATTTTCGGTaGGCAGGCAGCTTCTTTGAAGGCCTAAGGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RHCILGSGSYFR*AGSFFEGLRLF Trigger: AAACAGCCTTAGGCCTTCAAAGAAGCTGCCTGCTCACCGAAAATAAGATCCGCTCCCTAATATACAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS GCA 72 bp | TACATTGTGGCTGTGGACCTCTGGGAAATCTCTTTATaGATGGGATTCAAGGCATTGTATATTAGGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: YIVAVDLWEISL*MGFKALYIRER Trigger: CCGCTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CCA 72 bp | GGTGACTGCACAGTGGTAATACCTGGCATTGAGCATTaGCAAACCTTCTGTCCATTCATCACTTTCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: GDCTVVIPGIEH*QTFCPFITFTV Trigger: AACAGTGAAAGTGATGAATGGACAGAAGGTTTGCCAATGCTCAATGCCAGGTATTACCACTGTGCAGTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS GCA 72 bp | AACACCATAGCTCTCCCTGGTATAATCTGGTATTTCTaGTCCCTGAATCCAAACATTTGTCAAAGGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: NTIALPGIIWYF*SLNPNICQRIP Trigger: TGGGATCCTTTGACAAATGTTTGGATTCAGGGAGCAGAAATACCAGATTATACCAGGGAGAGCTATGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CCA 72 bp | GCCAGTAATAGCCTCCAATTATATACATTGTGGCTGTaGACCTCTGGGAAATCTCTTTATGCATGGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: ASNSLQLYTLWL*TSGKSLYAWDS Trigger: TGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAATTGGAGGCTATTACTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CAA 72 bp | CTCTGGGAAATCTCTTTATGCATGGGATTCAAGGCATaGTATATTAGGGAGCGGATCTTATTTTCGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LWEISLCMGFKA*YIRERILFSVS Trigger: GCTCACCGAAAATAAGATCCGCTCCCTAATATACAATGCCTTGAATCCCATGCATAAAGAGATTTCCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CAA 90 bp | GAACCTCTGATAAAGGATGCCAGTAATAGCCTCCAATTATATACATaGTGGCTGTGGACCTCTGGGAAATCTCTTTATGCATGGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: EPLIKDASNSLQLYT*WLWTSGKSLYAWDS Trigger: TGAATCCCATGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAATTGGAGGCTATTACTGGCATCCTTTATCAGAGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CAA 90 bp | TCTCCCTGGTATAATCTGGTATTTCTGCTCCCTGAATCCAAACATTaGTCAAAGGATCCCATATGTGAACCTCTGATAAAGGATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPWYNLVFLLPESKH*SKDPICEPLIKDAS Trigger: ACTGGCATCCTTTATCAGAGGTTCACATATGGGATCCTTTGACAAATGTTTGGATTCAGGGAGCAGAAATACCAGATTATACCAGGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS CAA 72 bp | ATAAAGGATGCCAGTAATAGCCTCCAATTATATACATaGTGGCTGTGGACCTCTGGGAAATCTCTTTATGCA | + |
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Preference number: 6 (lower is better) Translates to: IKDASNSLQLYT*WLWTSGKSLYA Trigger: TGCATAAAGAGATTTCCCAGAGGTCCACAGCCACAATGTATATAATTGGAGGCTATTACTGGCATCCTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000437875.1 |
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| CDS TCA 72 bp | ATCATATTTCTCAATGCTCTGAAGATACGTTCCCTTTaGGTAGGAGTATCCTCCAGTGACATAAATACATCC | + |
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Preference number: 6 (lower is better) Translates to: IIFLNALKIRSL*VGVSSSDINTS Trigger: GGATGTATTTATGTCACTGGAGGATACTCCTACTCAAAGGGAACGTATCTTCAGAGCATTGAGAAATATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000272797.8 ENST00000392647.7 ENST00000498202.6 ENST00000602521.1 |
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| CDS GCA 72 bp | AAGGAGTGCATTCCAATACAATTATCAATATCCAAGTaGCTTACCAAAAACCGCTCACAAGCCTTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: KECIPIQLSISK*LTKNRSQAFFT Trigger: AGTAAAGAAGGCTTGTGAGCGGTTTTTGGTAAGGCACTTGGATATTGATAATTGTATTGGAATGCACTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000272797.8 ENST00000392647.7 |
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