RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL21 (Homo sapiens)

Ensembl gene IDs: ENSG00000162413

Ensembl transcript IDs: ENST00000377658.8, ENST00000377663.3, ENST00000463043.1, ENST00000467612.5, ENST00000496707.5, ENST00000610898.1

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTAGTGCAGCTCATCGGGGTCCCGCGGCGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCCACTGTCCAACTCGAAGCCACGCCC +
Preference number: 1 (lower is better)
Translates to: GLVQLIGVPRRPGSA*VHVIAATVQLEATP
Trigger: GGGCGTGGCTTCGAGTTGGACAGTGGCAGCGATGACATGGACCCAGGCCGACCCCGGCCGCCGCGGGACCCCGATGAGCTGCACTAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp TGCTGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTGGACAGTaGTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTGCTGGA +
Preference number: 1 (lower is better)
Translates to: CCPQDSQPGPSRPGQ*WAPILGLPSTAGAG
Trigger: TCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp TGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTGGACAGTGCTaGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTGCTGGAAGA +
Preference number: 1 (lower is better)
Translates to: CPQDSQPGPSRPGQC*APILGLPSTAGAGR
Trigger: TCTTCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp TGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCAGCAGGCCTaGACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGG +
Preference number: 1 (lower is better)
Translates to: CSMLPTGLPARPQQA*TVLGPHPRPSQHSR
Trigger: CCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCTGGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp ATGAGGGTGCCCGCTGCAGCGCCAGGCCTCCCCGTGTGCAGGTCGTaGCGAGCAGCGCTTCCTACGTTCTCTCTCAGAATCTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: MRVPAAAPGLPVCRS*RAALPTFSLRISAV
Trigger: CACTGCAGAGATTCTGAGAGAGAACGTAGGAAGCGCTGCTCGGCACGACCTGCACACGGGGAGGCCTGGCGCTGCAGCGGGCACCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp GCTCTCCCAGAAAGCAGCAGAGAGGCCAACCCCTTTCCAACACCCTaGCTAGGAGAACGGGCCTCCCCGGAGGCAGCTGGGCCTTCCCTA +
Preference number: 1 (lower is better)
Translates to: ALPESSREANPFPTP*LGERASPEAAGPSL
Trigger: TAGGGAAGGCCCAGCTGCCTCCGGGGAGGCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGGGTTGGCCTCTCTGCTGCTTTCTGGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp GAGAAGGTCTGGGGCATGAACTGGCGGAAGATGCTGACACTGCCATaGCAGAAGGTGGGTTCTGGGAGCCGCCCCACCACGCTCCACGCG +
Preference number: 1 (lower is better)
Translates to: EKVWGMNWRKMLTLP*QKVGSGSRPTTLHA
Trigger: CGCGTGGAGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGACCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp TGGCCAAACCCAGCCCTTACGCCCCTGCTGACAAGGGAGACAAGCTaGCCCGCTGAACTCCAACAACCTCTGGGTGGGCTCAGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: WPNPALTPLLTRETS*PAELQQPLGGLSSP
Trigger: GGGGCTGCTGAGCCCACCCAGAGGTTGTTGGAGTTCAGCGGGGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGGCTGGGTTTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp GAACTGGCGGAAGATGCTGACACTGCCATGCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCTCCACGCGCGAGTCTCTGGGTCATA +
Preference number: 1 (lower is better)
Translates to: ELAEDADTAMPEGGF*EPPHHAPRASLWVI
Trigger: TATGACCCAGAGACTCGCGCGTGGAGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp GTCTGCCTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATaGGAGGACCCCTTCTCCCTTCACGCGTCCCTCCCAAGTCATCGT +
Preference number: 1 (lower is better)
Translates to: VCLVRCSRFRPSSAS*EDPFSLHASLPSHR
Trigger: ACGATGACTTGGGAGGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CAGGAGCTAGGGAGGCAGGCTCCCCACACCTCTGGACATGGAATTTaGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCAGGTT +
Preference number: 1 (lower is better)
Translates to: QELGRQAPHTSGHGI*DPTSARLPGPLLQV
Trigger: AACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGGGGAGCCTGCCTCCCTAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 90 bp GAGGACGCAAGAGCCAGTCAGGGGGTAGGAGCAGGGGGCTATGGCTaGGGAGGCCCAGCATCTGATAGGACCACATCCTCTTCACCCTCC +
Preference number: 1 (lower is better)
Translates to: EDARASQGVGAGGYG*GGPASDRTTSSSPS
Trigger: GGAGGGTGAAGAGGATGTGGTCCTATCAGATGCTGGGCCTCCTCAGCCATAGCCCCCTGCTCCTACCCCCTGACTGGCTCTTGCGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 90 bp GTCCTTCCGTGGGTGCCCAGCTCAGTGCCTGGAACGGTCAGGGATTaGGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCC +
Preference number: 1 (lower is better)
Translates to: VLPWVPSSVPGTVRD*GRSQPCMAKPSPYA
Trigger: GGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCCACGGAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp GCTCCGGCCACATGGGCTGCTGGTGTATCTAAGAACACGCCAGGGTaGCCTGCTGCAGGGCCTCTGTACCTGCTGTCCCTCTCTGGAACA +
Preference number: 1 (lower is better)
Translates to: APATWAAGVSKNTPG*PAAGPLYLLSLSGT
Trigger: TGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCCATGTGGCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp CCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCT +
Preference number: 1 (lower is better)
Translates to: PPKSLCSSCEPNVSL*TKEWGTAPQRCQLP
Trigger: AGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
3UTR GCA 90 bp GACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTaGTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTC +
Preference number: 1 (lower is better)
Translates to: DMEFGTPLQPVCLVR*SRFRPSSASWEDPF
Trigger: GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp CCCACACCTCTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTaGCTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGG +
Preference number: 1 (lower is better)
Translates to: PTPLDMEFGTPLQPV*LVRCSRFRPSSASW
Trigger: CCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp TGGACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTaGTGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAAC +
Preference number: 1 (lower is better)
Translates to: WTVLGPHPRPSQHSR*WKMTMTQARRAAMN
Trigger: GTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTaGACTGGCTCGCACCACAGCCCTCATCTGAGTGGCCGACACAAG +
Preference number: 1 (lower is better)
Translates to: GGQTQERAQSQAQLS*TGSHHSPHLSGRHK
Trigger: CTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGAGCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CACCTCTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTaGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGG +
Preference number: 1 (lower is better)
Translates to: HLWTWNLGPHFSPSA*SAAPGSGHPQPHGR
Trigger: CCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CTTGAGGAGCACGAGGGAGAGGCCAGGCAGCCCTGTCAGGGGTCCTaGGACATATTAAGGCAACCAGCCACGCCATCTGGCCAGCACAAG +
Preference number: 1 (lower is better)
Translates to: LEEHEGEARQPCQGS*DILRQPATPSGQHK
Trigger: CTTGTGCTGGCCAGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCTGGCCTCTCCCTCGTGCTCCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp GACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCATCACAGTCTaGACAGCATGTCCTTCCGTGGGTGCCCAGCTCAGTGCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: DQPSPRCPVLAVITV*TACPSVGAQLSAWN
Trigger: GTTCCAGGCACTGAGCTGGGCACCCACGGAAGGACATGCTGTCCAGACTGTGATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp AGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATaGCCTGTGCTGGCAGTCATCACAGTCTGGACAGCATGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: RVPQGQGLADQPSPR*PVLAVITVWTACPS
Trigger: GGAAGGACATGCTGTCCAGACTGTGATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp GCCAGGGTGCCCTGCTGCAGGGCCTCTGTACCTGCTGTCCCTCTCTaGAACAGGTGTCCCCAGATGACTGTATGCCTTGCTCCCTCACTT +
Preference number: 1 (lower is better)
Translates to: ARVPCCRASVPAVPL*NRCPQMTVCLAPSL
Trigger: AAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp GGTGGGTTCTGGGAGCCGCCCCACCACGCTCCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCACGTCCGAGAGTTCAAATGTATTGTC +
Preference number: 1 (lower is better)
Translates to: GGFWEPPHHAPRASL*VIGLYHVREFKCIV
Trigger: GACAATACATTTGAACTCTCGGACGTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGGAGCGTGGTGGGGCGGCTCCCAGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp TCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTGCCATGCCAGAAGGTGGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: SNSKPRPPEKVWGMN*RKMLTLPCQKVGSG
Trigger: CCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp TCGCTGCCACTGTCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAGATGCTGACACTGCCATGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: SLPLSNSKPRPPEKV*GMNWRKMLTLPCQK
Trigger: CTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGACAGTGGCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp ACAGTGCTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTGCTaGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGT +
Preference number: 1 (lower is better)
Translates to: TVLGPHPRPSQHSRC*KMTMTQARRAAMNC
Trigger: ACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp TTCTCCCTTCACGCGTCCCTCCCAAGTCATCGTCCTCTCCCAAGGTaGGAACAAGTAGGTGCAGATGACAACGGCAGGAGGGGTGTGCGC +
Preference number: 1 (lower is better)
Translates to: FSLHASLPSHRPLPR*EQVGADDNGRRGVR
Trigger: GCGCACACCCCTCCTGCCGTTGTCATCTGCACCTACTTGTTCCCACCTTGGGAGAGGACGATGACTTGGGAGGGACGCGTGAAGGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATaGCCAAACCCAGCCCTTACGCCCCTGCTGACAAGGGAGACAAGC +
Preference number: 1 (lower is better)
Translates to: QCLERSGIEGVANLV*PNPALTPLLTRETS
Trigger: GCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 90 bp GGGCCTCTGTACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATaGCTGTATGCCTTGCTCCCTCACTTCCTTCTGCTCTCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GPLYLLSLSGTGVPR*LYALLPHFLLLSGS
Trigger: TGAGCCAGAGAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp TATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTACCTaGTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACTGTATGCCT +
Preference number: 1 (lower is better)
Translates to: YLRTRQGALLQGLCT*CPSLEQVSPDDCMP
Trigger: AGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp AAAAAGGTAGGTCACAGACCTCATGCTGACTCTGCTCCGGCCACATaGGCTGCTGGTGTATCTAAGAACACGCCAGGGTGCCCTGCTGCA +
Preference number: 1 (lower is better)
Translates to: KKVGHRPHADSAPAT*AAGVSKNTPGCPAA
Trigger: TGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCCATGTGGCCGGAGCAGAGTCAGCATGAGGTCTGTGACCTACCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR TCA 90 bp GGGAAAACTGAGGCTTGCATGGCTGACAGTGGCAGAGCTGGGCTCTaGACCGCGAGGCTGGATGATTCCTTCCATCTTTCCCAAATTCGC +
Preference number: 1 (lower is better)
Translates to: GKTEACMADSGRAGL*TARLDDSFHLSQIR
Trigger: GCGAATTTGGGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTCTGCCACTGTCAGCCATGCAAGCCTCAGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR TCA 90 bp AAGTGGCTCTTCCTCAACTGCAGGGAGGGCGTTCCCGACGGCCTCTaGTTCAGGCTCTCAAGGTACAGAAACCTTCCAGGTAATGGATCC +
Preference number: 1 (lower is better)
Translates to: KWLFLNCREGVPDGL*FRLSRYRNLPGNGS
Trigger: GGATCCATTACCTGGAAGGTTTCTGTACCTTGAGAGCCTGAATCAGAGGCCGTCGGGAACGCCCTCCCTGCAGTTGAGGAAGAGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp GTACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACTGTATaGCTTGCTCCCTCACTTCCTTCTGCTCTCTGGCTCACAGCAGAT +
Preference number: 1 (lower is better)
Translates to: VPAVPLWNRCPQMTV*LAPSLPSALWLTAD
Trigger: ATCTGCTGTGAGCCAGAGAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp AGCTGGTGTCCACAGGCTAGAGGGACCCATTGCTGCAGAGGCTGGTaGCTGGTTTTCCCCATACTTGGTCTTCTAAACCCAAAGACAGGG +
Preference number: 1 (lower is better)
Translates to: SWCPQARGTHCCRGW*LVFPILGLLNPKTG
Trigger: CCCTGTCTTTGGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGCCTGTGGACACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp GTCAGGCTGGGCACCCCTCTTCTCAACAAGCCCAGAGAGAAGGGGTaGACCCTGGTTGTCCTATTCAGAACACACAGCAAGTGCTCAACA +
Preference number: 1 (lower is better)
Translates to: VRLGTPLLNKPREKG*TLVVLFRTHSKCST
Trigger: TGTTGAGCACTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGGCTTGTTGAGAAGAGGGGTGCCCAGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 90 bp CTGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTaGTCATACCAGCCAGGGCGTTCTAGGACAAGACTTCCTAACCCG +
Preference number: 1 (lower is better)
Translates to: LEDDHDPSEKSRHEL*SYQPGRSRTRLPNP
Trigger: CGGGTTAGGAAGTCTTGTCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp AGGGACCCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTaGTCTTCTAAACCCAAAGACAGGGTCCTGATGGTGGAGACCTGG +
Preference number: 1 (lower is better)
Translates to: RDPLLQRLVPGFPHT*SSKPKDRVLMVETW
Trigger: CCAGGTCTCCACCATCAGGACCCTGTCTTTGGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CCCAGCTGGTGTCCACAGGCTAGAGGGACCCATTGCTGCAGAGGCTaGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCAAAGACA +
Preference number: 1 (lower is better)
Translates to: PSWCPQARGTHCCRG*CLVFPILGLLNPKT
Trigger: TGTCTTTGGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGCCTGTGGACACCAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp TGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACTGTATGCCTTaGTCCCTCACTTCCTTCTGCTCTCTGGCTCACAGCAGATACTCA +
Preference number: 1 (lower is better)
Translates to: CCPSLEQVSPDDCMP*SLTSFCSLAHSRYS
Trigger: TGAGTATCTGCTGTGAGCCAGAGAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp GAGAAGGGGTGGACCCTGGTTGTCCTATTCAGAACACACAGCAAGTaGTCAACACAAGTATTCCCACAGTGGGCTGGGCATGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: EKGWTLVVLFRTHSK*STQVFPQWAGHGGS
Trigger: TGAGCCACCATGCCCAGCCCACTGTGGGAATACTTGTGTTGAGCACTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp CTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTaGCCAGGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGG +
Preference number: 1 (lower is better)
Translates to: LQAFSTLEPTTKATS*PGLPLEAVGLLTRR
Trigger: CCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp CCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTTTaGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACC +
Preference number: 1 (lower is better)
Translates to: PGAAKLRHSPSCRKL*QWDFLDWTNQTKLT
Trigger: GGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 90 bp TCCAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTaGAGAAAGCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAA +
Preference number: 1 (lower is better)
Translates to: SKRNPGAAKLRHSPS*RKLWQWDFLDWTNQ
Trigger: TTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 90 bp TGGGCACCCCTCTTCTCAACAAGCCCAGAGAGAAGGGGTGGACCCTaGTTGTCCTATTCAGAACACACAGCAAGTGCTCAACACAAGTAT +
Preference number: 1 (lower is better)
Translates to: WAPLFSTSPERRGGP*LSYSEHTASAQHKY
Trigger: ATACTTGTGTTGAGCACTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGGCTTGTTGAGAAGAGGGGTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 90 bp TTAAGGCAACCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTaGAATCTGCTAAGTGACAGTGCTAAGACTGTCTTCCTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: LRQPATPSGQHKGLK*NLLSDSAKTVFLLR
Trigger: TCTCAGCAGGAAGACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGGTTGCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 90 bp AGAATAGACAAAAATAAATATGTCAACCTGCCCGACCCTCTGGGGTaGACTGGATGTGGACACTGGAGGGAGGGCGTCCTTTATTACATA +
Preference number: 1 (lower is better)
Translates to: RIDKNKYVNLPDPLG*TGCGHWREGVLYYI
Trigger: TATGTAATAAAGGACGCCCTCCCTCCAGTGTCCACATCCAGTTCACCCCAGAGGGTCGGGCAGGTTGACATATTTATTTTTGTCTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCAGTCTGCCTGGTCCGCTaGTCCAGGTTCAGGCCATCC +
Preference number: 2 (lower is better)
Translates to: RGKASQTSQARDALCWQSVCLVR*SRFRPS
Trigger: GGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGAC...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp TTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCTCCCCGGAGGCAGCTaGGCCTTCCCTATGGTGATG +
Preference number: 2 (lower is better)
Translates to: FHRGKASQTSQARDALCWLPGGS*AFPMVM
Trigger: CATCACCATAGGGAAGGCCCAGCTGCCTCCGGGGAG...CCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCACGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCC +
Preference number: 2 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTARPGSA*VHVIAA
Trigger: GGCAGCGATGACATGGACCCAGGCCGACCCCGGCCG...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CAA 90 bp CCAGGAGCTAGGGAGGCAGGCTCCCCACACCTCTGGACATGGAATTaGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: PGAREAGSPHLWTWN*GPHFSPSAWSAAPG
Trigger: ACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGGGGAGCCTGCCTCCCTAGCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCACATGTCCCACTGTTCTaGGTGCAGCCTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RGKASQTSQARDALCWQSHVPLF*VQPLEG
Trigger: GCCCTCCAGAGGCTGCACCCAGAACAGTGGGACATG...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp TTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGGCCCAGCTCAGTGCCTaGAACGGTCAGGGATTGAGG +
Preference number: 2 (lower is better)
Translates to: FHRGKASQTSQARDALCWAQLSA*NGQGLR
Trigger: CCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGC...CCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR TCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCCTTACGCCCCTGCTaGCAAGGGAGACAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLPLRPC*QGRQAA
Trigger: GGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGG...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCCTGGGAGATGGAGCTTaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPLGDGA*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAAGCTCCATCTCCCAG...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCAAGGACGGCCAGGCTaGCCCCCACATGTACCTGTG +
Preference number: 2 (lower is better)
Translates to: GIEGVANLVWPNPALTPLQGRPG*PPHVPV
Trigger: CACAGGTACATGTGGGGGGCAGCCTGGCCGTCCTTG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR TCA 90 bp TCTGCTTGGCTGGGTGTCAATGATCACCTCCCAGGGCCTCCCGGGAAGGAGAGGTCACAGACCTCATGCTaGCTCTGCTCCGGCCACATG +
Preference number: 2 (lower is better)
Translates to: SAWLGVNDHLPGPPGKERSQTSC*LCSGHM
Trigger: CATGTGGCCGGAGCAGAGTCAGCATGAGGTCTGTGA...CCTCTCCTTCCCGGGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGTCTGCAGTGGCCCTCTaGGCTGAGCAGTGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQSAVAL*AEQCCS
Trigger: AGAACAGCACTGCTCAGCCCAGAGGGCCACTGCAGA...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGGCCAGGGTGCCCTGCTaGAGGGCCTCTGTACCTGCT +
Preference number: 2 (lower is better)
Translates to: DSNDIHSVWTGLLRSTREARVPC*RASVPA
Trigger: AGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGC...CTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCGGGAAAACTGAGGCTTaGATGGCTGACAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: NPEFHRGKASQTSQARDAGKTEA*MADSGR
Trigger: TCTGCCACTGTCAGCCATGCAAGCCTCAGTTTTCCC...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGTCCCAGCACAGCAGGTaGTGGAAGATGACCATGACC +
Preference number: 2 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLSQHSR*WKMTMT
Trigger: GGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGA...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGTTCAGGAAGGTGCGGTaGGAGGACTGCGAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: GLPLEAVGLLTRRPSKGLFRKVR*EDCESR
Trigger: CCTTGACTCGCAGTCCTCCCACCGCACCTTCCTGAA...CAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCAGAACACACAGCAAGTaGTCAACACAAGTATTCCCA +
Preference number: 2 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVRTHSK*STQVFP
Trigger: TGGGAATACTTGTGTTGAGCACTTGCTGTGTGTTCT...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTACTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTA +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLLHRGP*RARLGL
Trigger: TAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAG...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCACCCAGAGAGAAGGGGTaGACCCTGGTTGTCCTATTC +
Preference number: 2 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAPREKG*TLVVLF
Trigger: GAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGG...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGACCAAAGCCACCTCCTaGCCAGGACTTCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLTKATS*PGLPLE
Trigger: TTCTAAAGGAAGTCCTGGGCAGGAGGTGGCTTTGGT...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGTCTGCTCCGGCCACATaGGCTGCTGGTGTATCTAAG +
Preference number: 2 (lower is better)
Translates to: PAQCLERSGIEGVANLVWSAPAT*AAGVSK
Trigger: CTTAGATACACCAGCAGCCCATGTGGCCGGAGCAGA...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCCACACCTCTGGACATaGAATTTGGGACCCCACTTC +
Preference number: 2 (lower is better)
Translates to: GIEGVANLVWPNPALTPLPHLWT*NLGPHF
Trigger: GAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp CCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCCCCTTTCCAACACCCTaGCTAGGAGAACGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PLLQRLVPGFPHTWSSKPPFPTP*LGERAS
Trigger: GGAGGCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGG...GGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGAGACCCAGAAACATGTaGTGGCAGGAAAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GIEGVANLVWPNPALTPLRPRNM*WQESGS
Trigger: AGAGCCACTTTCCTGCCAGCACATGTTTCTGGGTCT...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGGTTGAGGCGGGAGAATaGCGTGAACCTGGGAGATGG +
Preference number: 2 (lower is better)
Translates to: DSNDIHSVWTGLLRSTREVEAGE*REPGRW
Trigger: CCATCTCCCAGGTTCACGCCATTCTCCCGCCTCAAC...CTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGAAACTGAGGCTTGCATaGCTGACAGTGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PAQCLERSGIEGVANLVWKLRLA*LTVAEL
Trigger: CAGCTCTGCCACTGTCAGCCATGCAAGCCTCAGTTT...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR TCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACTTCCCAAATTCGCTATaGCTATGTGCAGCTTACTGC +
Preference number: 2 (lower is better)
Translates to: PCAQRSGALPRRGASYLHFPNSL*LCAAYC
Trigger: GCAGTAAGCTGCACATAGTCATAGCGAATTTGGGAA...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTAGAAGGGGTGGACCCTaGTTGTCCTATTCAGAACAC +
Preference number: 2 (lower is better)
Translates to: RQPCQGSWDILRQPATPSRRGGP*LSYSEH
Trigger: GTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCT...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR TCA 90 bp GAGCTGGGCTCTGAACCGCGAGGCTGGATGATTCCTTCCATCTTTCCCAAATTCATGGCCAAATGGCACTaGAGCCTCCCTGTCCCATCA +
Preference number: 2 (lower is better)
Translates to: ELGSEPRGWMIPSIFPKFMAKWH*SLPVPS
Trigger: TGATGGGACAGGGAGGCTTCAGTGCCATTTGGCCAT...GAATTTGGGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp ACGCTGGGTCTCTTAAATGCCAGGACATTAAGCTGTGATGTAAGCTGTGAGGCTAAGAACACGCCAGGGTaGCCTGCTGCAGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: TLGLLNARTLSCDVSCEAKNTPG*PAAGPL
Trigger: CAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTT...AGCCTCACAGCTTACATCACAGCTTAATGTCCTGGCATTTAAGAGACCCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp TTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCTTCTAAGGTCAAACTaGAAGCATTTTCAACTTTGG +
Preference number: 2 (lower is better)
Translates to: FHRGKASQTSQARDALCWLLRSN*KHFQLW
Trigger: CCAAAGTTGAAAATGCTTGCAGTTTGACCTTAGAAG...CCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAGGGTGCCCAGCTCAGTaGCTGGAACGGTCAGGGATT +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLGCPAQ*LERSGI
Trigger: AATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCC...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAGCCCAGCTCAGTGCCTaGAACGGTCAGGGATTGAGG +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLAQLSA*NGQGLR
Trigger: CCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGC...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CAA 90 bp CCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTTaGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PRGCQAAAFTLLQKA*AMGLLRLDKSNKAD
Trigger: GTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTACCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACT +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLPNVSL*TKEWGT
Trigger: AGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR GCA 90 bp CAACCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTACCAAAGCCACCTCCTaGCCAGGACTTCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: QPATPSGQHKGLKCNLLSTKATS*PGLPLE
Trigger: TTCTAAAGGAAGTCCTGGGCAGGAGGTGGCTTTGGT...ACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTACGAGATGCCCTGTGCTaGCAGTCATCACAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLRDALC*QSSQSG
Trigger: TCCAGACTGTGATGACTGCCAGCACAGGGCATCTCG...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR TCA 90 bp TGTAGGCAATATGATGTGTACCTCAGACTAACACTGCTCACATGGCCAAATGGCAGCACTTTGGGAGGCTaGGCCAGGCAGATCACAAGG +
Preference number: 2 (lower is better)
Translates to: CRQYDVYLRLTLLTWPNGSTLGG*ARQITR
Trigger: CCTTGTGATCTGCCTGGCTCAGCCTCCCAAAGTGCT...GCCATTTGGCCATGTGAGCAGTGTTAGTCTGAGGTACACATCATATTGCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATCCCTCACTTCCTTCTaGTCTCTGGCTCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLSLTSF*SLAHSR
Trigger: TCTGCTGTGAGCCAGAGAGCAGAAGGAAGTGAGGGA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp ACGCTGGGTCTCTTAAATGCCAGGACATTAAGCTGTGATGTAAGCTGTGAGGCTCAAGTATTCCCACAGTaGGCTGGGCATGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TLGLLNARTLSCDVSCEAQVFPQ*AGHGGS
Trigger: TGAGCCACCATGCCCAGCCCACTGTGGGAATACTTG...AGCCTCACAGCTTACATCACAGCTTAATGTCCTGGCATTTAAGAGACCCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp AACTCAAGCCAAGGCTACTTTGGGTACTTTGAGGGGAAACTGACCATTTCCAAGCCATCCTCAGCCTCATaGGAGGACCCCTTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: NSSQGYFGYFEGKLTISKPSSAS*EDPFSL
Trigger: AAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGG...CTTGGAAATGGTCAGTTTCCCCTCAAAGTACCCAAAGTAGCCTTGGCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTATTCAGCCCGTCTGCCTaGTCCGCTGCTCCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVFSPSA*SAAPGS
Trigger: TGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAA...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAAGCTGTCTGCTTGGCTaGGTGTCAATGATCACCTCC +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLSCLLG*VSMITS
Trigger: GGAGGTGATCATTGACACCCAGCCAAGCAGACAGCT...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAGACATCCACAGTGTATaGACTGGGCTCTTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLDIHSV*TGLLRS
Trigger: GCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTC...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR TCA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTAGTTCCCGACGGCCTCTaGTTCAGGCTCTCAAGGTAC +
Preference number: 2 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVVPDGL*FRLSRY
Trigger: GTACCTTGAGAGCCTGAATCAGAGGCCGTCGGGAAC...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCTCCTGCAGAAAGCTTTaGCAATGGGACTTCTTAGAC +
Preference number: 2 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTSCRKL*QWDFLD
Trigger: GTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGA...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR TCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAAAAGTATTCCCACACTaGCTTCCTCAGGAACCAGCT +
Preference number: 2 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLKVFPH*LPQEPA
Trigger: AGCTGGTTCCTGAGGAAGTCAGTGTGGGAATACTTT...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR GCA 90 bp AGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGAGGTCAGTGAGCCTTAAGTaGAAAATAAGGGTAAGAGCA +
Preference number: 2 (lower is better)
Translates to: SNDIHSVWTGLLRSTRERSVSLK*KIRVRA
Trigger: TGCTCTTACCCTTATTTTGCACTTAAGGCTCACTGA...CCTCTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CCA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTACGTCCTCTCCCAAGGTaGGAACAAGTAGGTGCAGAT +
Preference number: 2 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVRPLPR*EQVGAD
Trigger: ATCTGCACCTACTTGTTCCCACCTTGGGAGAGGACG...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR-3UTR CCA 90 bp TGTAGGCAATATGATGTGTACCTCAGACTAACACTGCTCACATGGCCAAATGGCCTTCCTTCTGCTCTCTaGCTCACAGCAGATACTCAA +
Preference number: 2 (lower is better)
Translates to: CRQYDVYLRLTLLTWPNGLPSAL*LTADTQ
Trigger: TTGAGTATCTGCTGTGAGCCAGAGAGCAGAAGGAAG...GCCATTTGGCCATGTGAGCAGTGTTAGTCTGAGGTACACATCATATTGCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp GCGGCGGCCGGGGTCGGCCTGGGTCCATGTCATCGCTaGCACTGTCCAACTCGAAGCCACGCCCACCCGAGA +
Preference number: 3 (lower is better)
Translates to: AAAGVGLGPCHR*HCPTRSHAHPR
Trigger: TCTCGGGTGGGCGTGGCTTCGAGTTGGACAGTGGCAGCGATGACATGGACCCAGGCCGACCCCGGCCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp CCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTAGTGCAGCTCATCGGG +
Preference number: 3 (lower is better)
Translates to: PRRGASYLHRGP*RARLGLVQLIG
Trigger: CCCGATGAGCTGCACTAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CAA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCCCCAGAGGGGTGGCCTaGGCTCTCCCAGAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVPRGVA*ALPESS
Trigger: GCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGGG...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp TTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTaGCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LCTKEWGTAPQR*QLPAPRPVPGQ
Trigger: CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
3UTR GCA 72 bp CCCGCTGCAGCGCCAGGCCTCCCCGTGTGCAGGTCGTaGCGAGCAGCGCTTCCTACGTTCTCTCTCAGAATC +
Preference number: 3 (lower is better)
Translates to: PAAAPGLPVCRS*RAALPTFSLRI
Trigger: GATTCTGAGAGAGAACGTAGGAAGCGCTGCTCGGCACGACCTGCACACGGGGAGGCCTGGCGCTGCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR TCA 72 bp TGGGCACCCGCAGCTGTCTGCTTGGCTGGGTGTCAATaGTCACCTCCCAGGGCCTCCCGGGAAGGAGAGGGT +
Preference number: 3 (lower is better)
Translates to: WAPAAVCLAGCQ*SPPRASREGEG
Trigger: ACCCTCTCCTTCCCGGGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAAGCAGACAGCTGCGGGTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp GAAAGCAGCAGAGAGGCCAACCCCTTTCCAACACCCTaGCTAGGAGAACGGGCCTCCCCGGAGGCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ESSREANPFPTP*LGERASPEAAG
Trigger: CCCAGCTGCCTCCGGGGAGGCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGGGTTGGCCTCTCTGCTGCTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp GCCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTaGCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCC +
Preference number: 3 (lower is better)
Translates to: AQRVLVHKGVGH*PAEVPVTCTEA
Trigger: GGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
3UTR CCA 72 bp GAAGATGCTGACACTGCCATGCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCTCCACGCGCGAGTCTC +
Preference number: 3 (lower is better)
Translates to: EDADTAMPEGGF*EPPHHAPRASL
Trigger: GAGACTCGCGCGTGGAGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCATCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp GGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTGCTaGAAGATGACCATGACCCAAGCGAGAAGAGCCGCC +
Preference number: 3 (lower is better)
Translates to: GPHPRPSQHSRC*KMTMTQARRAA
Trigger: GGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp TACGCCCCTGCTGACAAGGGAGACAAGCTGCCCCGCTaGACTCCAACAACCTCTGGGTGGGCTCAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: YAPADKGDKLPR*TPTTSGWAQQP
Trigger: GGGCTGCTGAGCCCACCCAGAGGTTGTTGGAGTTCAGCGGGGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp ACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTACCTaGTGTCCCTCTCTGGAACAGGTGTCCCCAGATGAC +
Preference number: 3 (lower is better)
Translates to: TRQGALLQGLCT*CPSLEQVSPDD
Trigger: GTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp AGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: SLCSSCEPNVSL*TKEWGTAPQRC
Trigger: GCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
3UTR GCA 72 bp TTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTaGTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAG +
Preference number: 3 (lower is better)
Translates to: FGTPLQPVCLVR*SRFRPSSASWE
Trigger: CTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp CTGGGCCCCCATCCTCGGCCTTCCCAGCACAGCAGGTaGTGGAAGATGACCATGACCCAAGCGAGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: LGPHPRPSQHSR*WKMTMTQARRA
Trigger: GGCTCTTCTCGCTTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGAAGGCCGAGGATGGGGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp CCAGCCCTTACGCCCCTGCTGACAAGGGAGACAAGCTaGCCCGCTGAACTCCAACAACCTCTGGGTGGGCTC +
Preference number: 3 (lower is better)
Translates to: PALTPLLTRETS*PAELQQPLGGL
Trigger: GAGCCCACCCAGAGGTTGTTGGAGTTCAGCGGGGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp CAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATaGCCTGTGCTGGCAGTCATCACAGTCTGGACAGCA +
Preference number: 3 (lower is better)
Translates to: QGQGLADQPSPR*PVLAVITVWTA
Trigger: TGCTGTCCAGACTGTGATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp TGGGAGCCGCCCCACCACGCTCCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCACGTCCGAGAGTTCAAA +
Preference number: 3 (lower is better)
Translates to: WEPPHHAPRASL*VIGLYHVREFK
Trigger: TTTGAACTCTCGGACGTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGGAGCGTGGTGGGGCGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CACGAGGGAGAGGCCAGGCAGCCCTGTCAGGGGTCCTaGGACATATTAAGGCAACCAGCCACGCCATCTGGC +
Preference number: 3 (lower is better)
Translates to: HEGEARQPCQGS*DILRQPATPSG
Trigger: GCCAGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCTGGCCTCTCCCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp ACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTaGACTGGCTCGCACCACAGCCCTCATCTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: TQERAQSQAQLS*TGSHHSPHLSG
Trigger: GCCACTCAGATGAGGGCTGTGGTGCGAGCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp GCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTaGCAGTCATCACAGTCTGGACAGCATGTCCTTCCG +
Preference number: 3 (lower is better)
Translates to: ASQTSQARDALC*QSSQSGQHVLP
Trigger: CGGAAGGACATGCTGTCCAGACTGTGATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp GCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTaGAGTACGGCAGCTGCCAACCACAGCAAAGCCGCA +
Preference number: 3 (lower is better)
Translates to: APQPSSEWPTQA*STAAANHSKAA
Trigger: TGCGGCTTTGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp TGGGTGCCCAGCTCAGTGCCTGGAACGGTCAGGGATTaGGGGCGTAGCCAACCTTGTATGGCCAAACCCAGC +
Preference number: 3 (lower is better)
Translates to: WVPSSVPGTVRD*GRSQPCMAKPS
Trigger: GCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp ACATGGGCTGCTGGTGTATCTAAGAACACGCCAGGGTaGCCTGCTGCAGGGCCTCTGTACCTGCTGTCCCTC +
Preference number: 3 (lower is better)
Translates to: TWAAGVSKNTPG*PAAGPLYLLSL
Trigger: GAGGGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTaGCTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCA +
Preference number: 3 (lower is better)
Translates to: LDMEFGTPLQPV*LVRCSRFRPSS
Trigger: TGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp AAGCCACGCCCACCCGAGAAGGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTGCCATGCCAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: KPRPPEKVWGMN*RKMLTLPCQKV
Trigger: CACCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGGGCGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CTGTCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAGATGCTGACACTGCCA +
Preference number: 3 (lower is better)
Translates to: LSNSKPRPPEKV*GMNWRKMLTLP
Trigger: TGGCAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp ACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTaGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCT +
Preference number: 3 (lower is better)
Translates to: TWNLGPHFSPSA*SAAPGSGHPQP
Trigger: AGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp AGCCCGAGATGCCCTGTGCTGGCAGTCATCACAGTCTaGACAGCATGTCCTTCCGTGGGTGCCCAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: SPRCPVLAVITV*TACPSVGAQLS
Trigger: ACTGAGCTGGGCACCCACGGAAGGACATGCTGTCCAGACTGTGATGACTGCCAGCACAGGGCATCTCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp GGTCACAGACCTCATGCTGACTCTGCTCCGGCCACATaGGCTGCTGGTGTATCTAAGAACACGCCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: GHRPHADSAPAT*AAGVSKNTPGC
Trigger: GCACCCTGGCGTGTTCTTAGATACACCAGCAGCCCATGTGGCCGGAGCAGAGTCAGCATGAGGTCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CACGCGTCCCTCCCAAGTCATCGTCCTCTCCCAAGGTaGGAACAAGTAGGTGCAGATGACAACGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: HASLPSHRPLPR*EQVGADDNGRR
Trigger: CCTCCTGCCGTTGTCATCTGCACCTACTTGTTCCCACCTTGGGAGAGGACGATGACTTGGGAGGGACGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp GAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATaGCCAAACCCAGCCCTTACGCCCCTGCTGACAAGG +
Preference number: 3 (lower is better)
Translates to: ERSGIEGVANLV*PNPALTPLLTR
Trigger: CCTTGTCAGCAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CCA 72 bp TGGCAGTCATCACAGTCTGGACAGCATGTCCTTCCGTaGGTGCCCAGCTCAGTGCCTGGAACGGTCAGGGAT +
Preference number: 3 (lower is better)
Translates to: WQSSQSGQHVLP*VPSSVPGTVRD
Trigger: ATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCCACGGAAGGACATGCTGTCCAGACTGTGATGACTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp GAGGCTTGCATGGCTGACAGTGGCAGAGCTGGGCTCTaGACCGCGAGGCTGGATGATTCCTTCCATCTTTCC +
Preference number: 3 (lower is better)
Translates to: EACMADSGRAGL*TARLDDSFHLS
Trigger: GGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTCTGCCACTGTCAGCCATGCAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CAGCGCTTCCTACGTTCTCTCTCAGAATCTCTGCAGTaGCCCTCTGGGCTGAGCAGTGCTGTTCTCCCCATG +
Preference number: 3 (lower is better)
Translates to: QRFLRSLSESLQ*PSGLSSAVLPM
Trigger: CATGGGGAGAACAGCACTGCTCAGCCCAGAGGGCCACTGCAGAGATTCTGAGAGAGAACGTAGGAAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp ACCTCCAAGACCCAGAAACATGTGCTGGCAGGAAAGTaGCTCTTCCTCAACTGCAGGGAGGGCGTTCCCGAC +
Preference number: 3 (lower is better)
Translates to: TSKTQKHVLAGK*LFLNCREGVPD
Trigger: GTCGGGAACGCCCTCCCTGCAGTTGAGGAAGAGCCACTTTCCTGCCAGCACATGTTTCTGGGTCTTGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp CCTCAGACTAACACTGCTCACATGGCCAAATGGCACTaGAGCCTCCCTGTCCCATCACTGTCAGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: PQTNTAHMAKWH*SLPVPSLSGWA
Trigger: TGCCCAGCCTGACAGTGATGGGACAGGGAGGCTTCAGTGCCATTTGGCCATGTGAGCAGTGTTAGTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR TCA 72 bp TTCCTCAACTGCAGGGAGGGCGTTCCCGACGGCCTCTaGTTCAGGCTCTCAAGGTACAGAAACCTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: FLNCREGVPDGL*FRLSRYRNLPG
Trigger: ACCTGGAAGGTTTCTGTACCTTGAGAGCCTGAATCAGAGGCCGTCGGGAACGCCCTCCCTGCAGTTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp GTCCCTCTCTGGAACAGGTGTCCCCAGATGACTGTATaGCTTGCTCCCTCACTTCCTTCTGCTCTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: VPLWNRCPQMTV*LAPSLPSALWL
Trigger: GAGCCAGAGAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp GGGGAAACTGACCATTTCCAAGAGAAACCCAGGGGCTaGCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: GETDHFQEKPRG*QAAAFTLLQKA
Trigger: AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTGGAAATGGTCAGTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp TACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATaGCTGTATGCCTTGCTCCCTCACTTCCTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: YLLSLSGTGVPR*LYALLPHFLLL
Trigger: GAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR GCA 72 bp TCTCTGGAACAGGTGTCCCCAGATGACTGTATGCCTTaGTCCCTCACTTCCTTCTGCTCTCTGGCTCACAGC +
Preference number: 3 (lower is better)
Translates to: SLEQVSPDDCMP*SLTSFCSLAHS
Trigger: GCTGTGAGCCAGAGAGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp GGCACCCCTCTTCTCAACAAGCCCAGAGAGAAGGGGTaGACCCTGGTTGTCCTATTCAGAACACACAGCAAG +
Preference number: 3 (lower is better)
Translates to: GTPLLNKPREKG*TLVVLFRTHSK
Trigger: CTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGGCTTGTTGAGAAGAGGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp GACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTaGTCATACCAGCCAGGGCGTTCTAGGACAAGACTT +
Preference number: 3 (lower is better)
Translates to: DHDPSEKSRHEL*SYQPGRSRTRL
Trigger: AAGTCTTGTCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp GTTCTCTCTCAGAATCTCTGCAGTGGCCCTCTGGGCTaGGCAGTGCTGTTCTCCCCATGTTACAGATGGGAA +
Preference number: 3 (lower is better)
Translates to: VLSQNLCSGPLG*AVLFSPCYRWE
Trigger: TTCCCATCTGTAACATGGGGAGAACAGCACTGCTCAGCCCAGAGGGCCACTGCAGAGATTCTGAGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp TGTCCACAGGCTAGAGGGACCCATTGCTGCAGAGGCTaGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAAC +
Preference number: 3 (lower is better)
Translates to: CPQARGTHCCRG*CLVFPILGLLN
Trigger: GTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGCCTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp GGCGTTCTAGGACAAGACTTCCTAACCCGACAGCAATaGCATCCACAGTGTATGGACTGGGCTCTTGAGGAG +
Preference number: 3 (lower is better)
Translates to: GVLGQDFLTRQQ*HPQCMDWALEE
Trigger: CTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTCGGGTTAGGAAGTCTTGTCCTAGAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR TCA 72 bp AAAAATAAATATGTCAACCTGCCCGACCCTCTGGGGTaGACTGGATGTGGACACTGGAGGGAGGGCGTCCTT +
Preference number: 3 (lower is better)
Translates to: KNKYVNLPDPLG*TGCGHWREGVL
Trigger: AAGGACGCCCTCCCTCCAGTGTCCACATCCAGTTCACCCCAGAGGGTCGGGCAGGTTGACATATTTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp CCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTaGAATCTGCTAAGTGACAGTGCTAAGACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: PATPSGQHKGLK*NLLSDSAKTVF
Trigger: GAAGACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp TGGACCCTGGTTGTCCTATTCAGAACACACAGCAAGTaGTCAACACAAGTATTCCCACAGTGGGCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: WTLVVLFRTHSK*STQVFPQWAGH
Trigger: ATGCCCAGCCCACTGTGGGAATACTTGTGTTGAGCACTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CTCTTCTCAACAAGCCCAGAGAGAAGGGGTGGACCCTaGTTGTCCTATTCAGAACACACAGCAAGTGCTCAA +
Preference number: 3 (lower is better)
Translates to: LFSTSPERRGGP*LSYSEHTASAQ
Trigger: TTGAGCACTTGCTGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGGCTTGTTGAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CCA 72 bp CTGCGGCATTCACCCTCCTGCAGAAAGCTTTGGCAATaGGACTTCTTAGACTGGACAAATCAAACAAAGCTG +
Preference number: 3 (lower is better)
Translates to: LRHSPSCRKLWQ*DFLDWTNQTKL
Trigger: CAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR GCA 72 bp ATTCCTTCCATCTTTCCCAAATTCGCTATGACTATGTaGAGCTTACTGCGGGGAAAACAGAACGCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: IPSIFPKFAMTM*SLLRGKQNAGS
Trigger: AGACCCAGCGTTCTGTTTTCCCCGCAGTAAGCTGCACATAGTCATAGCGAATTTGGGAAAGATGGAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CAA 90 bp TTCCTGCTGAGAACATCTCTACGAGTTAGTTCACTAGAAAAGGCAATAAACATTAGGGGTGGACCCTGGTaGTCCTATTCAGAACACACA +
Preference number: 3 (lower is better)
Translates to: FLLRTSLRVSSLEKAINIRGGPW*SYSEHT
Trigger: TGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCT...AATGTTTATTGCCTTTTCTAGTGAACTAACTCGTAGAGATGTTCTCAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR-3UTR CAA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTATCACGGAGTGTAGGTTaGGAAATGTTAACAGACACA +
Preference number: 3 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVSRSVG*EMLTDT
Trigger: TGTGTCTGTTAACATTTCCAAACCTACACTCCGTGA...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGCGGCTCTCGCGCAGCTaGCCCGCGAACATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQRLSRS*PANMAR
Trigger: CCGCGCCATGTTCGCGGGGCAGCTGCGCGAGAGCCG...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCACTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPLHRGP*RARLGL
Trigger: TAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAG...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGCGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGRPGSA*VHVIAA
Trigger: GGCAGCGATGACATGGACCCAGGCCGACCCCGGCCG...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGCGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQRPGSA*VHVIAA
Trigger: GGCAGCGATGACATGGACCCAGGCCGACCCCGGCCG...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGAGGTCGAGCTGCTGCTaGAGGAAGGCCCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGRSSCC*RKAPHA
Trigger: GGCGTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCT...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGACCAGGGCGGGAGCTaGCCGCAGTCCACCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLDQGGS*PQSTSD
Trigger: GTCGCTGGTGGACTGCGGCCAGCTCCCGCCCTGGTC...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR GCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGTGCCCAGCGCCACGATaGTGTAGCCTCCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGCPAPR*CSLRPG
Trigger: ACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCA...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGGGTCATAGCGCTCGGTaGTGTCGGCGGCCACCACGT +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGGHSAR*CRRPPR
Trigger: ACGTGGTGGCCGCCGACAGCACCGAGCGCTATGACC...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGTCTCGGCGAGACCGGTaGACGGGCGAGGACGCATTC +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQSRRDR*TGEDAF
Trigger: GAATGCGTCCTCGCCCGTCCACCGGTCTCGCCGAGA...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTTCGGGAGGCACTCCGTaGAGGCGCACCCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARSGGTP*RRTRSA
Trigger: CGCCGAGCGGGTGCGCCTGCACGGAGTGCCTCCCGA...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGCCCCGCAGAGGTaGCAGTTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQTAPQR*QLPAPR
Trigger: CCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCAGCCAGGGAGCCGATaGCATAGAGCCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTQPGSR*HRAGHG
Trigger: GCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCAGGGCCCCACCTaGGGAACCACTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: GVGHCPAEVPVTCTEARAGQGPT*GTTGDK
Trigger: CTTGTCTCCAGTGGTTCCCCAGGTGGGGCCCTGCCC...GGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCATGCCATGCCAGAAGGTaGGTTCTGGGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPCHARR*VLGAAP
Trigger: TGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCA...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGGACAGGAGGGTCACTTaGGGCCAGGAGTGTGAGACC +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQDRRVT*GQECET
Trigger: GGTCTCACACTCCTGGCCTCAAGTGACCCTCCTGTC...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCACCTGTGCTCCTCCTGTaGGCCCAACGTGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPPVLLL*AQRVLV
Trigger: CACAAGGACACGTTGGGCTCACAGGAGGAGCACAGG...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGTTGGCTGGGTGTCAATaGTCACCTCCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGLAGCQ*SPPRAS
Trigger: GGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAA...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAATCAGGACCAGCCTGTaGTTCCAATGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPIRTSL*FQCWPA
Trigger: GGCGGGCCAGCATTGGAAGCACAGGCTGGTCCTGAT...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTAGTCTGCGTCGCAGCTaGAGGCTCCGGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARSLRRS*RLRGCP
Trigger: CGGGCAGCCCCGGAGCCTGCAGCTGCGACGCAGACT...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610898.1
CDS-3UTR CCA 90 bp TTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCGCGGGCCTTCAGCATaGGCGCCACCTCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: FHRGKASQTSQARDALCWRGPSA*APPPPT
Trigger: AGTGGGCGGAGGTGGCGCCCATGCTGAAGGCCCGCG...CCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCCCATGGGGTAGGTCATaGGCTGCAGGGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVPWGRS*AAGPPR
Trigger: CCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGG...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGCCAGAGGGGTGGCCTTaGCTCTCCCAGAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGPEGWP*LSQKAA
Trigger: TGCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGG...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCACCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPPRASL*VIGLYH
Trigger: GTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGG...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGTGCCATGCCAGAAGGTaGGTTCTGGGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLCHARR*VLGAAP
Trigger: TGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCA...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCATTGTGCACAAAGGAGTaGGGCACTGCCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPLCTKE*GTAPQR
Trigger: CCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAA...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp TTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGGGGGTGTGCGCCGCGTaGGTGAGCTGTGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: FHRGKASQTSQARDALCWGVCAA*VSCDPR
Trigger: CCGCGGATCACAGCTCACCCACGCGGCGCACACCCC...CCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGTTCAGCCCGTCTGCCTaGTCCGCTGCTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQFSPSA*SAAPGS
Trigger: TGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAA...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCACATGTCCCACTGTTCTaGGTGCAGCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPHVPLF*VQPLEG
Trigger: GCCCTCCAGAGGCTGCACCCAGAACAGTGGGACATG...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAAGCACTTTGGGAGGCTaGGCCAGGCAGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPSTLGG*ARQITR
Trigger: CCTTGTGATCTGCCTGGCTCAGCCTCCCAAAGTGCT...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGACTGGCGGAAGATGCTaGCACTGCCATGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGTGGRC*HCHARR
Trigger: CCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGT...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp TGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCGGCTCTCGCGCAGCTaGCCCGCGAACATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: WSAAPGSGHPQPHGRTPSRLSRS*PANMAR
Trigger: CCGCGCCATGTTCGCGGGGCAGCTGCGCGAGAGCCG...AGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCACTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: WILGWLRHPRACAPPVSPLHRGP*RARLGL
Trigger: TAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAG...TGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGAAAGGAGTGGGGCACTaGCCCGCAGAGGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPKGVGH*PAEVPV
Trigger: AACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCAAGCAGGCCTGGACAGTaGTGGGCCCCCATCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGKASQTSQARDALCWQSSRPGQ*WAPILG
Trigger: GCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCT...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCCAGCAGGCGCGCCAGTaGCAGCCGCTCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPQQARQ*QPLQLL
Trigger: GAGCAGCTGGAGCGGCTGCCACTGGCGCGCCTGCTG...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCGCGGGCCTTCAGCATaGGCGCCACCTCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPRGPSA*APPPPT
Trigger: AGTGGGCGGAGGTGGCGCCCATGCTGAAGGCCCGCG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCCACGGCACGCAGTGGTaGAGCAGTTGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GVGHCPAEVPVTCTEARAHGTQW*SSCPWG
Trigger: ACCCCATGGACAACTGCTCCACCACTGCGTGCCGTG...GGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGCCACGGCACGCAGTaGTGGAGCAGTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTGHGTQ*WSSCPW
Trigger: CCATGGACAACTGCTCCACCACTGCGTGCCGTGGCC...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGGTTGAGGCGGGAGAATaGCGTGAACCTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGVEAGE*REPGRW
Trigger: CCATCTCCCAGGTTCACGCCATTCTCCCGCCTCAAC...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGGGCTCCCCACACCTCTaGACATGGAATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGGSPHL*TWNLGP
Trigger: GGGTCCCAAATTCCATGTCCAGAGGTGTGGGGAGCC...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGAACTCCAACAACCTCTaGGTGGGCTCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQNSNNL*VGSAAP
Trigger: AGGGGCTGCTGAGCCCACCCAGAGGTTGTTGGAGTT...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp AGAAGGTGGGTTCTGGGAGCCGCCCCACCACGCTCCACGCGCGAGTCTCTGGGTGTGCGGTGGGAGGACTaGGAGTCAAGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRWVLGAAPPRSTRESLGVRWED*ESRRWR
Trigger: CCTCCACCTCCTTGACTCGCAGTCCTCCCACCGCAC...ACCCAGAGACTCGCGCGTGGAGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCAGCCAAGCCCGAGATaGCCTGTGCTGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTQPSPR*PVLAVI
Trigger: GATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCCAGAGGGGTGGCCTTaGCTCTCCCAGAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTPEGWP*LSQKAA
Trigger: TGCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQVWGMN*RKMLTL
Trigger: CAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGAC...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTPPEKV*GMNWRK
Trigger: CTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGAGCCGCCATGAACTGTaGTCATACCAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLSRHEL*SYQPGR
Trigger: ACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCT...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGCGAGATGCCCTGTGCTaGCAGTCATCACAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQRDALC*QSSQSG
Trigger: TCCAGACTGTGATGACTGCCAGCACAGGGCATCTCG...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCCGCGGCCCGTGTAGCTaGAGTCCAGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVRCSRFRPSSASWEDPFRGPCS*SPAAAA
Trigger: TGCAGCTGCTGCTGGACTTCAGCTACACGGGCCGCG...GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCACCACGTGGCGCAGAATaGACCGCTGCGCCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAPRGAE*TAAPRS
Trigger: CGAGCGCGGCGCAGCGGTTCATTCTGCGCCACGTGG...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGCCACTCATTCACGCTTaGGTTGTACCTCCACACGCA +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGPLIHA*VVPPHA
Trigger: TGCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGG...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR GCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCTCACGTCCAGGAACTTaGGCTCGGCGCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDASRPGT*ARRAAG
Trigger: GCCAGCTGCGCGCCGAGCGCAAGTTCCTGGACGTGA...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACATTCACGGCCGGGAACTaGAGCAGGTCGGCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTFTAGN*SRSAAR
Trigger: GCGCGCCGCCGACCTGCTGCAGTTCCCGGCCGTGAA...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGTCCATGTCATCGCTaGCACTGTCCAACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLGPCHR*HCPTRS
Trigger: GCTTCGAGTTGGACAGTGGCAGCGATGACATGGACC...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGTCCATGTCATCGCTaGCACTGTCCAACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GVGHCPAEVPVTCTEARAGPCHR*HCPTRS
Trigger: GCTTCGAGTTGGACAGTGGCAGCGATGACATGGACC...GGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCCCACTTCAGCCCGTCTaGCTGGTCCGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPPLQPV*LVRCSR
Trigger: CCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGG...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCCCAAGCCCACACCCCTaGTCATGTCCCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVPSPHP*SCPTVL
Trigger: CAGAACAGTGGGACATGAGCAGGGGTGTGGGCTTGG...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCTGGAGCAGTTGTCCATaGGGTAGGTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVGHCPAEVPVTCTEARAWSSCP*GRSWAA
Trigger: TGCAGCCCATGACCTACCCCATGGACAACTGCTCCA...GGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGGAGACCCACCCATCATaGCTGTGGATCCCAAACACT +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGETHPS*LWIPNT
Trigger: AGTGTTTGGGATCCACAGCCATGATGGGTGGGTCTC...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGCAAGTATTCCCACAGTaGGCTGGGCATGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLQVFPQ*AGHGGS
Trigger: TGAGCCACCATGCCCAGCCCACTGTGGGAATACTTG...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCCTCCCCGGAGGCAGCTaGGCCTTCCCTATGGTGATG +
Preference number: 4 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPLPGGS*AFPMVM
Trigger: CATCACCATAGGGAAGGCCCAGCTGCCTCCGGGGAG...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCT +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQPEGGF*EPPHHA
Trigger: AGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGG...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCERPGSA*VHVIAA
Trigger: GGCAGCGATGACATGGACCCAGGCCGACCCCGGCCG...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGGGTGTGCGCCGCGTaGGTGAGCTGTGATCCGCGG +
Preference number: 4 (lower is better)
Translates to: GLPLEAVGLLTRRPSKGLGVCAA*VSCDPR
Trigger: CCGCGGATCACAGCTCACCCACGCGGCGCACACCCC...CAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCATCTGGACATGGAATTTaGGACCCCACTTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPSGHGI*DPTSAR
Trigger: ACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGA...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGCCACACCTCTGGACATaGAATTTGGGACCCCACTTC +
Preference number: 4 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGPHLWT*NLGPHF
Trigger: GAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGG...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGCAGAGGCTGGTGCCTaGTTTTCCCCATACTTGGTC +
Preference number: 4 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPAEAGA*FSPYLV
Trigger: GACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGC...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCCCAGTCCCGAGCAGCTaGAGGCCTCAGCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPPVPSS*RPQRSP
Trigger: AGGACTTCGCTGAGGCCTTCAGCTGCTCGGGACTGG...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGCCACTCATTCACGCTTaGGTTGTACCTCCACACGCA +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLPLIHA*VVPPHA
Trigger: TGCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGG...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR TCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGTGTGCGCCGCGTGGGTaGGCTGTGATCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWCAPRG*AVIRGV
Trigger: CACCCCGCGGATCACAGCTCACCCACGCGGCGCACA...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCAGCCAGGTCGAGCTGCTaGTGCAGGAAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAARSSC*CRKAPH
Trigger: GTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGC...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCATGTCATCGCTGCCACTGTCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTGCCAGGTCGAGCTGCTaGTGCAGGAAGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PCHRCHCPTRSHAHPRRSARSSC*CRKAPH
Trigger: GTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGC...AGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGACAGTGGCAGCGATGACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGTTGGCCAGGTCGAGCTaGTGCTGCAGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLLARSS*CCRKAP
Trigger: CGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGCCAA...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGCTCTGGGCTGAGCAGTaGTGTTCTCCCCATGTTACA +
Preference number: 4 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPLWAEQ*CSPHVT
Trigger: TGTAACATGGGGAGAACAGCACTGCTCAGCCCAGAG...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGCAAGGACGGCCAGGCTaGCCCCCACATGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQQGRPG*PPHVPV
Trigger: CACAGGTACATGTGGGGGGCAGCCTGGCCGTCCTTG...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLLHRGP*RARLGL
Trigger: TAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAG...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCTGGCTCTTCCTCAACTaGAGGGAGGGCGTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPWLFLN*REGVPD
Trigger: GTCGGGAACGCCCTCCCTGCAGTTGAGGAAGAGCCA...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCTCCCACTGTTCTGGGTaGAGCCTCTGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPSHCSG*SLWRAA
Trigger: GGCTGCCCTCCAGAGGCTGCACCCAGAACAGTGGGA...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCAGGGGCTGCCAAGCTaGGGCATTCACCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCQGLPS*GIHPPA
Trigger: TGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTG...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCTCCCAGCACAGCAGGTaGTGGAAGATGACCATGACC +
Preference number: 4 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVSQHSR*WKMTMT
Trigger: GGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGA...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAGCAGGCCTGGACAGTaGTGGGCCCCCATCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTSRPGQ*WAPILG
Trigger: GCCGAGGATGGGGGCCCAGCACTGTCCAGGCCTGCT...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGAAGCCTCCCTGTCCCATCACTGTCAGGCTGGGCACCCCTCTTCTCAACAAGCAGCAGGCGCGCCAGTaGCAGCCGCTCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LKPPCPITVRLGTPLLNKQQARQ*QPLQLL
Trigger: GAGCAGCTGGAGCGGCTGCCACTGGCGCGCCTGCTG...CTTGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGGGACAGGGAGGCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACAGCTCGTCACAGTCCTaGTCGCAGCCGCCCACGAGC +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHSSSQS*SQPPTS
Trigger: GCTCGTGGGCGGCTGCGACCAGGACTGTGACGAGCT...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACGCGGGCCTTCAGCATaGGCGCCACCTCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLRGPSA*APPPPT
Trigger: AGTGGGCGGAGGTGGCGCCCATGCTGAAGGCCCGCG...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCAGCACAGAGGAGCTGTaGTACTCGCGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGSTEEL*YSRAFS
Trigger: GCTGAAGGCCCGCGAGTACCACAGCTCCTCTGTGCT...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACACAGCCAGGGAGCCGATaGCATAGAGCCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTQPGSR*HRAGHG
Trigger: GCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTG...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GTATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTACCTGCTGTCCCAGCCAGGGAGCCGATaGCATAGAGCCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: VSKNTPGCPAAGPLYLLSQPGSR*HRAGHG
Trigger: GCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTG...GGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTGACCAGGGCGGGAGCTaGCCGCAGTCCACCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSDQGGS*PQSTSD
Trigger: GTCGCTGGTGGACTGCGGCCAGCTCCCGCCCTGGTC...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGAGAAGGGGTGGACCCTaGTTGTCCTATTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: GTAPQRCQLPAPRPVPGQRRGGP*LSYSEH
Trigger: GTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCT...CTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGPRASL*VIGLYH
Trigger: GTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGG...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCT +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGPEGGF*EPPHHA
Trigger: AGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGG...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACGGCCGGGGTCGGCCTaGGTCCATGTCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLRPGSA*VHVIAA
Trigger: GGCAGCGATGACATGGACCCAGGCCGACCCCGGCCG...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGAGCTGTCTGCTTGGCTaGGTGTCAATGATCACCTCC +
Preference number: 4 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPSCLLG*VSMITS
Trigger: GGAGGTGATCATTGACACCCAGCCAAGCAGACAGCT...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCGTGCCAGAGGGTGCCTaGTCACAGGAAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPVPEGA*SQEAQL
Trigger: CAGCTGGGCTTCCTGTGACCAGGCACCCTCTGGCAC...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCCAGCTCAGTGCCTaGAACGGTCAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARAQLSA*NGQGLR
Trigger: CCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGC...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTGGATCCCCCAGCTaGTGTCCACAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCPGSPS*CPQARG
Trigger: CCCTCTAGCCTGTGGACACCAGCTGGGGGATCCAGG...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CAA 72 bp CAAGGCATGCCCTGTCAGTACCCCAGAGGGGTGGCCTaGGCTCTCCCAGAAAGCAGCAGAGAGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: QGMPCQYPRGVA*ALPESSREANP
Trigger: GGGGTTGGCCTCTCTGCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGGGGTACTGACAGGGCATGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
3UTR CAA 72 bp AGGGAGGCAGGCTCCCCACACCTCTGGACATGGAATTaGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: REAGSPHLWTWN*GPHFSPSAWSA
Trigger: AGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGGGGAGCCTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCGACAGGAGGGTCACTTaGGGCCAGGAGTGTGAGACC +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPDRRVT*GQECET
Trigger: GGTCTCACACTCCTGGCCTCAAGTGACCCTCCTGTC...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCACTGGCGGAAGATGCTaGCACTGCCATGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGTGGRC*HCHARR
Trigger: CCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGT...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCACCACAGCCCTCATCTaGGTGGCCGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPTTALI*VADTSL
Trigger: CAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGT...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCCCCGACCCTCTGGGGTaGACTGGATGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTPDPLG*TGCGHW
Trigger: CCAGTGTCCACATCCAGTTCACCCCAGAGGGTCGGG...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCGCCTCAGCGAAGTCCTaGATGTCCAGGCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPASAKS*MSRQLA
Trigger: GGCCAACTGCCTGGACATGCAGGACTTCGCTGAGGC...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGTGCCCAGCGCCACGATaGTGTAGCCTCCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCECPAPR*CSLRPG
Trigger: ACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCA...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGCAGGGCCTCTGTACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACGCCAGGGTGCCCTGCTaGAGGGCCTCTGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: LQGLCTCCPSLEQVSPDDARVPC*RASVPA
Trigger: AGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGC...GTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCACTGCCCCGCAGAGGTaGCAGTTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSTAPQR*QLPAPR
Trigger: CCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTGTCTGCCTGGTCCGCTaGTCCAGGTTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: WSAAPGSGHPQPHGRTPSVCLVR*SRFRPS
Trigger: GGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGAC...AGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGGGCACCCGCAGCTGTCCGGCATTCACCCTCCTaGAGAAAGCTTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QWDSSRAGPARAWAPAAVRHSPS*RKLWQW
Trigger: CCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCG...GACAGCTGCGGGTGCCCAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCGAGAAACCCAGGGGCTaGCAAGCTGCGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPEKPRG*QAAAFT
Trigger: GGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTC...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCCTCCCTGAGGGAGTTTaGACAGACCAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPLPEGV*TDQEGP
Trigger: TGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAG...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTGCTAGAGGGACCCATTaGTGCAGAGGCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCARGTH*CRGWCL
Trigger: CAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGC...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGGCCCCTGGCTCCGGTTaGTCTCGAGGAGTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQAPGSG*SRGVLG
Trigger: GCCTAAAACTCCTCGAGAGCAACCGGAGCCAGGGGC...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467612.5
CDS-3UTR CCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAGCTCGCCCACGTaGCGCAGAATGAACCGCTGC +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEPSSPT*RRMNRC
Trigger: GCAGCGGTTCATTCTGCGCCACGTGGGCGAGCTGGG...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCATCCGCCCAGGTGGTCTaGGAACTCGGCCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCASAQVV*ELGQVA
Trigger: CGCTACCTGGCCGAGTTCCCAGACCACCTGGGCGGA...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGCACGGCACGCAGTGGTaGAGCAGTTGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQHGTQW*SSCPWG
Trigger: ACCCCATGGACAACTGCTCCACCACTGCGTGCCGTG...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGGCCACGGCACGCAGTaGTGGAGCAGTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQGHGTQ*WSSCPW
Trigger: CCATGGACAACTGCTCCACCACTGCGTGCCGTGGCC...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCTTCAGGAAGGTGCGGTaGGAGGACTGCGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGFRKVR*EDCESR
Trigger: CCTTGACTCGCAGTCCTCCCACCGCACCTTCCTGAA...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCTCCTCAGGAACCAGCTaGGCGTGGTGGTTCACGCCT +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDASSGTS*AWWFTP
Trigger: AGGCGTGAACCACCACGCCCAGCTGGTTCCTGAGGA...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTCCTCAGGAACCAGCTaGGCGTGGTGGTTCACGCCT +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQSSGTS*AWWFTP
Trigger: AGGCGTGAACCACCACGCCCAGCTGGTTCCTGAGGA...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPPPEKV*GMNWRK
Trigger: CTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTCCATCCTCAGCCTCATaGGAGGACCCCTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARPSSAS*EDPFSL
Trigger: AAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGG...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCTTCAGCCCGTCTGCCTaGTCCGCTGCTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPFSPSA*SAAPGS
Trigger: TGAACCTGGAGCAGCGGACCAGGCAGACGGGCTGAA...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGGTGCCAGAGGGTGCCTaGTCACAGGAAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLVPEGA*SQEAQL
Trigger: CAGCTGGGCTTCCTGTGACCAGGCACCCTCTGGCAC...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTGGCCGACACAAGCCTaGAGTACGGCAGCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LVRCSRFRPSSASWEDPFWPTQA*STAAAN
Trigger: GTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCA...GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCACTGATGGTGGAGACCTaGGTAGGTCCGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: RGKASQTSQARDALCWQSLMVET*VGPEDR
Trigger: TCTGTCCTCCGGACCTACCCAGGTCTCCACCATCAG...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGGACATCCTTAAGTGGTaGAGACATGACAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VGHCPAEVPVTCTEARAGDILKW*RHDSPE
Trigger: TTCTGGGCTGTCATGTCTCCACCACTTAAGGATGTC...CCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGAAAGTATTCCCACACTaGCTTCCTCAGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPKVFPH*LPQEPA
Trigger: AGCTGGTTCCTGAGGAAGTCAGTGTGGGAATACTTT...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTAGCACTTTGGGAGGCTaGGCCAGGCAGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCSTLGG*ARQITR
Trigger: CCTTGTGATCTGCCTGGCTCAGCCTCCCAAAGTGCT...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGGGCAGAGCTGGGCTCTaGACCGCGAGGCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEGRAGL*TARLDD
Trigger: ATCATCCAGCCTCGCGGTTCAGAGCCCAGCTCTGCC...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAGTGGCCCTCTGGGCTaGGCAGTGCTGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTSGPLG*AVLFSP
Trigger: TGGGGAGAACAGCACTGCTCAGCCCAGAGGGCCACT...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCACTGGCGGAAGATGCTaGCACTGCCATGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPTGGRC*HCHARR
Trigger: CCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGT...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGCCTGTGCTCCTCCTGTaGGCCCAACGTGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQPVLLL*AQRVLV
Trigger: CACAAGGACACGTTGGGCTCACAGGAGGAGCACAGG...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGTCCGCGGGGTGGGGGTaGCCTCCAAGACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWSAGWG*PPRPRN
Trigger: GTTTCTGGGTCTTGGAGGTCACCCCCACCCCGCGGA...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGTGTGCGCCGCGTGGGTaGGCTGTGATCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQECAPRG*AVIRGV
Trigger: CACCCCGCGGATCACAGCTCACCCACGCGGCGCACA...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCGAGAAGAGCCGCCATaGACTGTGGTCATACCAGCC +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPREEPP*TVVIPA
Trigger: GGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCGAGAAGAGCCGCCATaGACTGTGGTCATACCAGCC +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDAREEPP*TVVIPA
Trigger: GGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCG...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TCTGCTTGGCTGGGTGTCAATGATCACCTCCCAGGGCCTCCCGGGAAGGAGAGGGACAAGCTGCCCCGCTaGACTCCAACAACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SAWLGVNDHLPGPPGKERDKLPR*TPTTSG
Trigger: CCCAGAGGTTGTTGGAGTTCAGCGGGGCAGCTTGTC...CCTCTCCTTCCCGGGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CCATGTCATCGCTGCCACTGTCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTCCCTTACGCCCCTGCTaGCAAGGGAGACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCHRCHCPTRSHAHPRRSPLRPC*QGRQAA
Trigger: GGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGG...AGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGACAGTGGCAGCGATGACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTGGAACGGTCAGGGATTaGGGGCGTAGCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCGTVRD*GRSQPC
Trigger: ACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCC...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACACCCGACCCTCTGGGGTaGACTGGATGTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTPDPLG*TGCGHW
Trigger: CCAGTGTCCACATCCAGTTCACCCCAGAGGGTCGGG...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGTTGGCCAGGTCGAGCTaGTGCTGCAGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWLARSS*CCRKAP
Trigger: CGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGCCAA...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCAGCCAGGGCGTTCTAGGACGCAGAATGAACCGCTaGGCCGCGCTCGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QARRAAMNCGHTSQGVLGRRMNR*AALASP
Trigger: GGGACTGGCGAGCGCGGCGCAGCGGTTCATTCTGCG...TCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGCAGGGCCTCTGTACCTaGTGTCCCTCTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTEQGLCT*CPSLEQ
Trigger: CTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTG...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCAAGCTATTCAGGAAGGTaGGGTGGGAGGACTGCGAGT +
Preference number: 4 (lower is better)
Translates to: RGKASQTSQARDALCWQSSYSGR*GGRTAS
Trigger: ACTCGCAGTCCTCCCACCGCACCTTCCTGAATAGCT...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGCTGGGAGATGGAGCTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQLGDGA*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAAGCTCCATCTCCCAG...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCATTCGCTATGACTATGTaGAGCTTACTGCGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPFAMTM*SLLRGK
Trigger: TTTTCCCCGCAGTAAGCTGCACATAGTCATAGCGAA...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp GGGCTGCTGGTGTATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTCCCTTTCCAACACCCTaGCTAGGAGAACGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLVYLRTRQGALLQGLCPFPTP*LGERAS
Trigger: GGAGGCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGG...ACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCATGCTGACACTGCCATaGCAGAAGGTGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGMLTLP*QKVGSG
Trigger: CCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCAT...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCGGTCCATGTCATCGCTaGCACTGTCCAACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGGPCHR*HCPTRS
Trigger: GCTTCGAGTTGGACAGTGGCAGCGATGACATGGACC...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGPNVSL*TKEWGT
Trigger: AGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGGCTCTTCCTCAACTaGAGGGAGGGCGTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTWLFLN*REGVPD
Trigger: GTCGGGAACGCCCTCCCTGCAGTTGAGGAAGAGCCA...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCAGTCTGCCTGGTCCGCTaGTCCAGGTTCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCAVCLVR*SRFRPS
Trigger: GGATGGCCTGAACCTGGAGCAGCGGACCAGGCAGAC...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCGGGTGCCCAGCTCAGTaGCTGGAACGGTCAGGGATT +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSGCPAQ*LERSGI
Trigger: AATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCC...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GTATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTACCTGCTGTCCCAAGCGCAGCTCTCCTaGACTGGCTCGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: VSKNTPGCPAAGPLYLLSQAQLS*TGSHHS
Trigger: GCTGTGGTGCGAGCCAGTGCAGGAGAGCTGCGCTTG...GGACAGCAGGTACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAAGGAGCCCAGCTCGCCCACGTaGCGCAGAATGAACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PKSLCSSCEPNVSLCTKEPSSPT*RRMNRC
Trigger: GCAGCGGTTCATTCTGCGCCACGTGGGCGAGCTGGG...CTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAAGGAGAGGCGGCCTCCTCCTTaGGCACACACAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: PKSLCSSCEPNVSLCTKERRPPP*AHTARR
Trigger: ACGACGGGCTGTGTGTGCCCAAGGAGGAGGCCGCCT...CTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTAGGCGGCCTCCTCCTTaGGCACACACAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSRRPPP*AHTARR
Trigger: ACGACGGGCTGTGTGTGCCCAAGGAGGAGGCCGCCT...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCGCCCAGGTGGTCTaGGAACTCGGCCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCSAQVV*ELGQVA
Trigger: CGCTACCTGGCCGAGTTCCCAGACCACCTGGGCGGA...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCAGCACAGAGGAGCTGTaGTACTCGCGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTSTEEL*YSRAFS
Trigger: GCTGAAGGCCCGCGAGTACCACAGCTCCTCTGTGCT...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCCTCCCAGGAGTCAGTaGTGTGGTCATAGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHPPRSQ*CGHSAR
Trigger: CCGAGCGCTATGACCACACCACTGACTCCTGGGAGG...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp CCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAAGGAGCCATGGGGTAGGTCATaGGCTGCAGGGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PKSLCSSCEPNVSLCTKEPWGRS*AAGPPR
Trigger: CCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGG...CTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGGACCAGGGCGGGAGCTaGCCGCAGTCCACCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQEDQGGS*PQSTSD
Trigger: GTCGCTGGTGGACTGCGGCCAGCTCCCGCCCTGGTC...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp AGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTGTGCTGGCAGTCATCTGCTCCGGCCACATaGGCTGCTGGTGTATCTAAG +
Preference number: 4 (lower is better)
Translates to: RGKASQTSQARDALCWQSSAPAT*AAGVSK
Trigger: CTTAGATACACCAGCAGCCCATGTGGCCGGAGCAGA...TGACTGCCAGCACAGGGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCGTTGAGGCGGGAGAATaGCGTGAACCTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPVEAGE*REPGRW
Trigger: CCATCTCCCAGGTTCACGCCATTCTCCCGCCTCAAC...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTCCCAGAGAGAAGGGGTaGACCCTGGTTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARPREKG*TLVVLF
Trigger: GAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGG...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCATCACTGTCAGGCTaGGCACCCCTCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: AQRSGALPRRGASYLHRGPSLSG*APLFST
Trigger: TGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGG...GCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACACTCCCCGGAGGCAGCTaGGCCTTCCCTATGGTGATG +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTLPGGS*AFPMVM
Trigger: CATCACCATAGGGAAGGCCCAGCTGCCTCCGGGGAG...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp CAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTGGGCAGGGCCCCACCTaGGGAACCACTGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: QEKPRGCQAAAFTLLQKAGQGPT*GTTGDK
Trigger: CTTGTCTCCAGTGGTTCCCCAGGTGGGGCCCTGCCC...AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARVWGMN*RKMLTL
Trigger: CAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGAC...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACTTGTGCACAAAGGAGTaGGGCACTGCCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHLCTKE*GTAPQR
Trigger: CCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAA...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCCATGTCCCACTGTTCTaGGTGCAGCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTHVPLF*VQPLEG
Trigger: GCCCTCCAGAGGCTGCACCCAGAACAGTGGGACATG...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCTGGCCGACACAAGCCTaGAGTACGGCAGCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSWPTQA*STAAAN
Trigger: GTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCA...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGCAGCCCTCATCTGAGTaGCCGACACAAGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTEQPSSE*PTQAWS
Trigger: ACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTG...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCGGGGTGAACTGGATGTaGACACTGGAGGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTGVNWM*TLEGGR
Trigger: ACGCCCTCCCTCCAGTGTCCACATCCAGTTCACCCC...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCATGGCCAAATGGCACTaGAGCCTCCCTGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPMAKWH*SLPVPS
Trigger: TGATGGGACAGGGAGGCTTCAGTGCCATTTGGCCAT...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCGTTCCCGACGGCCTCTaGTTCAGGCTCTCAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGVPDGL*FRLSRY
Trigger: GTACCTTGAGAGCCTGAATCAGAGGCCGTCGGGAAC...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCCTCTGAGGTGTTTTaGTGTAAGCCCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLPSEVF*CKPLAG
Trigger: CCCTGCCAGGGGCTTACATCAAAACACCTCAGAGGG...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCCCCTCTGAGGTGTTTTaGTGTAAGCCCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGPSEVF*CKPLAG
Trigger: CCCTGCCAGGGGCTTACATCAAAACACCTCAGAGGG...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCAACCACAGCCCTCATCTaGGTGGCCGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCATTALI*VADTSL
Trigger: CAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGT...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAAGAACACACAGCAAGTaGTCAACACAAGTATTCCCA +
Preference number: 4 (lower is better)
Translates to: GHCPAEVPVTCTEARAGPRTHSK*STQVFP
Trigger: TGGGAATACTTGTGTTGAGCACTTGCTGTGTGTTCT...TGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCGGGAAAACTGAGGCTTaGATGGCTGACAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPGKTEA*MADSGR
Trigger: TCTGCCACTGTCAGCCATGCAAGCCTCAGTTTTCCC...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGGGAAAACTGAGGCTTaGATGGCTGACAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARGKTEA*MADSGR
Trigger: TCTGCCACTGTCAGCCATGCAAGCCTCAGTTTTCCC...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTGGTCCATGTCATCGCTaGCACTGTCCAACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCGPCHR*HCPTRS
Trigger: GCTTCGAGTTGGACAGTGGCAGCGATGACATGGACC...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCACTGCCCCGCAGAGGTaGCAGTTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCTAPQR*QLPAPR
Trigger: CCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGAAAGGAGTGGGGCACTaGCCCGCAGAGGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEKGVGH*PAEVPV
Trigger: AACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAAAGGAGTGGGGCACTaGCCCGCAGAGGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTKGVGH*PAEVPV
Trigger: AACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp CAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCAGCCAGGGCGTTCTAGGACCACTTCAGCCCGTCTaGCTGGTCCGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QARRAAMNCGHTSQGVLGPLQPV*LVRCSR
Trigger: CCTGGAGCAGCGGACCAGGCAGACGGGCTGAAGTGG...TCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCCCAAGCCCACACCCCTaGTCATGTCCCACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTPSPHP*SCPTVL
Trigger: CAGAACAGTGGGACATGAGCAGGGGTGTGGGCTTGG...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACAGGGGCTGCCAAGCTaGGGCATTCACCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLQGLPS*GIHPPA
Trigger: TGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTG...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGCAGCCAAGCCCGAGATaGCCTGTGCTGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: GLPLEAVGLLTRRPSKGLQPSPR*PVLAVI
Trigger: GATGACTGCCAGCACAGGGCATCTCGGGCTTGGCTG...CAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCAAGGACGGCCAGGCTaGCCCCCACATGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLQGRPG*PPHVPD
Trigger: ATCAGGTACATGTGGGGGGCAGCCTGGCCGTCCTTG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377658.8
CDS-3UTR GCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCAAGGACGGCCAGGCTaGCCCCCACATGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEQGRPG*PPHVPD
Trigger: ATCAGGTACATGTGGGGGGCAGCCTGGCCGTCCTTG...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000467612.5
CDS-3UTR CCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAGCACAGAGGAGCTGTaGTACTCGCGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTSTEEL*YSRAFS
Trigger: GCTGAAGGCCCGCGAGTACCACAGCTCCTCTGTGCT...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp CCATGTCATCGCTGCCACTGTCCAACTCGAAGCCACGCCCACCCGAGAAGGTCTCCTCCCAGGAGTCAGTaGTGTGGTCATAGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCHRCHCPTRSHAHPRRSPPRSQ*CGHSAR
Trigger: CCGAGCGCTATGACCACACCACTGACTCCTGGGAGG...AGACCTTCTCGGGTGGGCGTGGCTTCGAGTTGGACAGTGGCAGCGATGACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTGGAGCAGTTGTCCATaGGGTAGGTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQWSSCP*GRSWAA
Trigger: TGCAGCCCATGACCTACCCCATGGACAACTGCTCCA...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCTGGAGCAGTTGTCCATaGGGTAGGTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPWSSCP*GRSWAA
Trigger: TGCAGCCCATGACCTACCCCATGGACAACTGCTCCA...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGTTAGAGTCGCAGTCTTaGGGGCGAAGGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLPLEAVGLLTRRPSKGLLESQS*GRRTRA
Trigger: CGCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAA...CAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTACAAACAAAATTAGCTaGGCGTGGTGGTGGGTACCT +
Preference number: 4 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTTNKIS*AWWWVP
Trigger: AGGTACCCACCACCACGCCCAGCTAATTTTGTTTGT...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGCTGCTGGTGTATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTTCTGCAGTGGCCCTCTaGGCTGAGCAGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLLVYLRTRQGALLQGLCSAVAL*AEQCCS
Trigger: AGAACAGCACTGCTCAGCCCAGAGGGCCACTGCAGA...ACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACTCTGCAGTGGCCCTCTaGGCTGAGCAGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHSAVAL*AEQCCS
Trigger: AGAACAGCACTGCTCAGCCCAGAGGGCCACTGCAGA...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLPRASL*VIGLYH
Trigger: GTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCT +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLPEGGF*EPPHHA
Trigger: AGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGG...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTCCCAGAAACATGTGCTaGCAGGAAAGTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARPRNMC*QESGSS
Trigger: GGAAGAGCCACTTTCCTGCCAGCACATGTTTCTGGG...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCCGTCCTCTCCCAAGGTaGGAACAAGTAGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPRPLPR*EQVGAD
Trigger: ATCTGCACCTACTTGTTCCCACCTTGGGAGAGGACG...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTCCAACAACCTCTGGGTaGGCTCAGCAGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCPTTSG*AQQPLG
Trigger: TCCTAGGGGCTGCTGAGCCCACCCAGAGGTTGTTGG...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCACAGCATGTCCTTCCGTaGGTGCCCAGCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAQHVLP*VPSSVP
Trigger: AGGCACTGAGCTGGGCACCCACGGAAGGACATGCTG...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGCAGCCCTCATCTGAGTaGCCGACACAAGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQQPSSE*PTQAWS
Trigger: ACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTG...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGGGGGTGAACTGGATGTaGACACTGGAGGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEGVNWM*TLEGGR
Trigger: ACGCCCTCCCTCCAGTGTCCACATCCAGTTCACCCC...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GCCTCCCTGTCCCATCACTGTCAGGCTGGGCACCCCTCTTCTCAACAAGCCCAGTGTAGCAGTCGACAGTaGCCAGCTCGTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASLSHHCQAGHPSSQQAQCSSRQ*PARHSP
Trigger: AGGACTGTGACGAGCTGGTCACTGTCGACTGCTACA...CTGGGCTTGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGGGACAGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGTCACAGACCTCATGCTaGCTCTGCTCCGGCCACATG +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCESQTSC*LCSGHM
Trigger: CATGTGGCCGGAGCAGAGTCAGCATGAGGTCTGTGA...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACAGGTGGAGGCTGCAGTaGGCCATGATTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHRWRLQ*AMIVPL
Trigger: CAGTGGTACAATCATGGCTCACTGCAGCCTCCACCT...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCATGGCCAAATGGCACTaGAGCCTCCCTGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGMAKWH*SLPVPS
Trigger: TGATGGGACAGGGAGGCTTCAGTGCCATTTGGCCAT...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCATGTGGGCCAAAGGGATaGGTGAGTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCACGPKG*VSGGQR
Trigger: CCTCTGACCTCCACTCACTCATCCCTTTGGCCCACA...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTACTGGCGGAAGATGCTaGCACTGCCATGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCTGGRC*HCHARR
Trigger: CCTTCTGGCATGGCAGTGTCAGCATCTTCCGCCAGT...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp CCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAAGGAGCCTGTGCTCCTCCTGTaGGCCCAACGTGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PKSLCSSCEPNVSLCTKEPVLLL*AQRVLV
Trigger: CACAAGGACACGTTGGGCTCACAGGAGGAGCACAGG...CTCCTTTGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR TCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGGTTCCCGACGGCCTCTaGTTCAGGCTCTCAAGGTAC +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLVPDGL*FRLSRY
Trigger: GTACCTTGAGAGCCTGAATCAGAGGCCGTCGGGAAC...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TCTGCTTGGCTGGGTGTCAATGATCACCTCCCAGGGCCTCCCGGGAAGGAGAGGACAAGTAGGTGCAGATaGCAACGGCAGGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SAWLGVNDHLPGPPGKERTSRCR*QRQEGC
Trigger: ACACCCCTCCTGCCGTTGTCATCTGCACCTACTTGT...CCTCTCCTTCCCGGGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGCCCTTACGCCCCTGCTaGCAAGGGAGACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLPLRPC*QGRQAA
Trigger: GGCAGCTTGTCTCCCTTGTCAGCAGGGGCGTAAGGG...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGGGAACGGTCAGGGATTaGGGGCGTAGCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEGTVRD*GRSQPC
Trigger: ACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCC...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCAGGTCGAGCTGCTGCTaGAGGAAGGCCCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: PLLQRLVPGFPHTWSSKPRSSCC*RKAPHA
Trigger: GGCGTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCT...GGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCACGTAGATGTCATTaGCCAGCGCCACGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LVRCSRFRPSSASWEDPFSRRCH*PAPRCC
Trigger: ACAGCATCGTGGCGCTGGGCAATGACATCTACGTGA...GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCTCTGGGCTGAGCAGTaGTGTTCTCCCCATGTTACA +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPLWAEQ*CSPHVT
Trigger: TGTAACATGGGGAGAACAGCACTGCTCAGCCCAGAG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCCCCTTTCCAACACCCTaGCTAGGAGAACGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCPFPTP*LGERAS
Trigger: GGAGGCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGG...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGCAAGGACGGCCAGGCTaGCCCCCACATGTACCTGTG +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLQGRPG*PPHVPV
Trigger: CACAGGTACATGTGGGGGGCAGCCTGGCCGTCCTTG...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACATGCTGACACTGCCATaGCAGAAGGTGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHMLTLP*QKVGSG
Trigger: CCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCAT...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGAAAGGAGTGGGGCACTaGCCCGCAGAGGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWKGVGH*PAEVPV
Trigger: AACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCCCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTPNVSL*TKEWGT
Trigger: AGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCGAGAAACCCAGGGGCTaGCAAGCTGCGGCATTCACC +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCEKPRG*QAAAFT
Trigger: GGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTC...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCTGCTTGGCTGGGTGTCAATGATCACCTCCCAGGGCCTCCCGGGAAGGAGAGGTCCCAGCACAGCAGGTaGTGGAAGATGACCATGACC +
Preference number: 4 (lower is better)
Translates to: SAWLGVNDHLPGPPGKERSQHSR*WKMTMT
Trigger: GGTCATGGTCATCTTCCAGCACCTGCTGTGCTGGGA...CCTCTCCTTCCCGGGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTCACAGGAAGCCCAGCTaGATGTTCCATGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCHRKPS*MFHAAH
Trigger: GTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTG...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTTGTAGTTTCCGAGTCTaGGTCGCAGCTGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCCSFRV*VAAAGS
Trigger: GGAGCCTGCAGCTGCGACGCAGACTCGGAAACTACA...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610898.1
CDS-3UTR CCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGGCATGTCCAGGCAGTTaGCCAGGTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWACPGS*PGRAAA
Trigger: AGCAGCAGCTCGACCTGGCCAACTGCCTGGACATGC...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTTCTCGGCGAGACCGGTaGACGGGCGAGGACGCATTC +
Preference number: 4 (lower is better)
Translates to: YRNLPGNGSWAGFATQEPSRRDR*TGEDAF
Trigger: GAATGCGTCCTCGCCCGTCCACCGGTCTCGCCGAGA...AGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTCTCAAGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCAGCTCGTCACAGTCCTaGTCGCAGCCGCCCACGAGC +
Preference number: 4 (lower is better)
Translates to: LSRYRNLPGNGSWAGFATSSSQS*SQPPTS
Trigger: GCTCGTGGGCGGCTGCGACCAGGACTGTGACGAGCT...GGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCTTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCCACGGCACGCAGTGGTaGAGCAGTTGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCHGTQW*SSCPWG
Trigger: ACCCCATGGACAACTGCTCCACCACTGCGTGCCGTG...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTAAACTGAGGCTTGCATaGCTGACAGTGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCKLRLA*LTVAEL
Trigger: CAGCTCTGCCACTGTCAGCCATGCAAGCCTCAGTTT...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSVWGMN*RKMLTL
Trigger: CAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGAC...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSPPEKV*GMNWRK
Trigger: CTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGG...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTATTGTGCACAAAGGAGTaGGGCACTGCCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLLCTKE*GTAPQR
Trigger: CCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAA...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCCATCCTCAGCCTCATaGGAGGACCCCTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLPSSAS*EDPFSL
Trigger: AAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCAGCACAGCAGGTGCTaGAAGATGACCATGACCCAA +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCQHSRC*KMTMTQ
Trigger: TTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTG...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTAGGCCTGGACAGTGCTaGGCCCCCATCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: YRNLPGNGSWAGFATQEPRPGQC*APILGL
Trigger: AAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCT...AGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCGCAGTCATCACAGTCTaGACAGCATGTCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPAVITV*TACPSV
Trigger: CACGGAAGGACATGCTGTCCAGACTGTGATGACTGC...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACTGATGGTGGAGACCTaGGTAGGTCCGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCALMVET*VGPEDR
Trigger: TCTGTCCTCCGGACCTACCCAGGTCTCCACCATCAG...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCACTGGATGTGGACACTaGAGGGAGGGCGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDATGCGH*REGVLY
Trigger: ATAAAGGACGCCCTCCCTCCAGTGTCCACATCCAGT...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CAA 72 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTaGAGGAGCACGAGGGAGAGGCCAGGCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DSNDIHSVWTGL*RSTRERPGSPV
Trigger: GACAGGGCTGCCTGGCCTCTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTTGTGGGCCAAAGGGATaGGTGAGTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QEKPRGCQAAAFTLLQKACGPKG*VSGGQR
Trigger: CCTCTGACCTCCACTCACTCATCCCTTTGGCCCACA...AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCAACAAGTAGGTGCAGATaGCAACGGCAGGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTATSRCR*QRQEGC
Trigger: ACACCCCTCCTGCCGTTGTCATCTGCACCTACTTGT...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTCTCAAGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCGCAGGGGGCTATGGCTaGGGAGGCCCAGCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LSRYRNLPGNGSWAGFATAGGYG*GGPASD
Trigger: ATCAGATGCTGGGCCTCCTCAGCCATAGCCCCCTGC...GGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCTTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCCTAACCCGACAGCAATaGCATCCACAGTGTATGGAC +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDALTRQQ*HPQCMD
Trigger: GTCCATACACTGTGGATGTCATTGCTGTCGGGTTAG...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTTCCCTCACTTCCTTCTaGTCTCTGGCTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WSAAPGSGHPQPHGRTPSSLTSF*SLAHSR
Trigger: TCTGCTGTGAGCCAGAGAGCAGAAGGAAGTGAGGGA...AGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGAAGAACACGCCAGGGTaGCCTGCTGCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQEKNTPG*PAAGPL
Trigger: CAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTT...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCACTATGTGCAGCTTACTaGGGGGAAAACAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: WILGWLRHPRACAPPVSPLCAAY*GENRTL
Trigger: CAGCGTTCTGTTTTCCCCGCAGTAAGCTGCACATAG...TGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCAATGCTGACACTGCCATaGCAGAAGGTGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCAMLTLP*QKVGSG
Trigger: CCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCAT...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGATGCTGACACTGCCATaGCAGAAGGTGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VMDPGLASPPKSLCSSCEMLTLP*QKVGSG
Trigger: CCCAGAACCCACCTTCTGGCATGGCAGTGTCAGCAT...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp TACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTACTGCCCCGCAGAGGTaGCAGTTACCTGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: YRNLPGNGSWAGFATQEPTAPQR*QLPAPR
Trigger: CCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT...AGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR GCA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCACCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAPNVSL*TKEWGT
Trigger: AGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACACCCAACGTGTCCTTGTaGACAAAGGAGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTPNVSL*TKEWGT
Trigger: AGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR GCA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGACCAAAGCCACCTCCTaGCCAGGACTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTETKATS*PGLPLE
Trigger: TTCTAAAGGAAGTCCTGGGCAGGAGGTGGCTTTGGT...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCCGGCATTCACCCTCCTaGAGAAAGCTTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGRHSPS*RKLWQW
Trigger: CCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCG...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GAGGGGAAACTGACCATTTCCAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATCAGGGCAAGCAACAGTaGCAGAGGGTGCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EGKLTISKRNPGAAKLRHQGKQQ*QRVPGH
Trigger: GTGACCAGGCACCCTCTGGCACTGTTGCTTGCCCTG...ATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTGGAAATGGTCAGTTTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGACAAGGGAGACAAGCTaGCCCGCTGAACTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLTRETS*PAELQQ
Trigger: TTGTTGGAGTTCAGCGGGGCAGCTTGTCTCCCTTGT...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCAGCCAGGGCGTTCTAGGAGCTAGAGGGACCCATTaGTGCAGAGGCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QARRAAMNCGHTSQGVLGARGTH*CRGWCL
Trigger: CAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGC...TCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGTCTCGAGGGGCGGGATaGGCGGGGAGACGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRSRGAG*AGRRLH
Trigger: GTGCAGACGTCTCCCCGCCCATCCCGCCCCTCGAGA...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CAACCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTCCATGGGGTAGGTCATaGGCTGCAGGGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPATPSGQHKGLKCNLLSPWGRS*AAGPPR
Trigger: CCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGG...ACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCCCAGAGAGAAGGGGTaGACCCTGGTTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLPREKG*TLVVLF
Trigger: GAATAGGACAACCAGGGTCCACCCCTTCTCTCTGGG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTTCAGAATCTCTGCAGTaGCCCTCTGGGCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCSESLQ*PSGLSS
Trigger: ACTGCTCAGCCCAGAGGGCCACTGCAGAGATTCTGA...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGTGCCATGCCAGAAGGTaGGTTCTGGGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: DSNDIHSVWTGLLRSTRECHARR*VLGAAP
Trigger: TGGGGCGGCTCCCAGAACCCACCTTCTGGCATGGCA...CTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTAGCTGTCTGCTTGGCTaGGTGTCAATGATCACCTCC +
Preference number: 4 (lower is better)
Translates to: WSAAPGSGHPQPHGRTPSSCLLG*VSMITS
Trigger: GGAGGTGATCATTGACACCCAGCCAAGCAGACAGCT...AGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGGACATCCACAGTGTATaGACTGGGCTCTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLDIHSV*TGLLRS
Trigger: GCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTC...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCTCCCTGTCCCATCACTGTCAGGCTGGGCACCCCTCTTCTCAACAAGCCCAGCAGCACAGCAGGTGCTaGAAGATGACCATGACCCAA +
Preference number: 4 (lower is better)
Translates to: ASLSHHCQAGHPSSQQAQQHSRC*KMTMTQ
Trigger: TTGGGTCATGGTCATCTTCCAGCACCTGCTGTGCTG...CTGGGCTTGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGGGACAGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTAACTCCAACAACCTCTaGGTGGGCTCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSNSNNL*VGSAAP
Trigger: AGGGGCTGCTGAGCCCACCCAGAGGTTGTTGGAGTT...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGGATCCCCCAGCTaGTGTCCACAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQEPGSPS*CPQARG
Trigger: CCCTCTAGCCTGTGGACACCAGCTGGGGGATCCAGG...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCCCAGTCCCGAGCAGCTaGAGGCCTCAGCGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PLLQRLVPGFPHTWSSKPPVPSS*RPQRSP
Trigger: AGGACTTCGCTGAGGCCTTCAGCTGCTCGGGACTGG...GGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TGGAACAGGTGTCCCCAGATGACTGTATGCCTTGCTCCCTCACTTCCTTCTGCTGGCAGAGCTGGGCTCTaGACCGCGAGGCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: WNRCPQMTVCLAPSLPSAGRAGL*TARLDD
Trigger: ATCATCCAGCCTCGCGGTTCAGAGCCCAGCTCTGCC...AGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCAGTGGCCCTCTGGGCTaGGCAGTGCTGTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLLQRLVPGFPHTWSSKPSGPLG*AVLFSP
Trigger: TGGGGAGAACAGCACTGCTCAGCCCAGAGGGCCACT...GGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGGCCTCAGCGAAGTCCTaGATGTCCAGGCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQEASAKS*MSRQLA
Trigger: GGCCAACTGCCTGGACATGCAGGACTTCGCTGAGGC...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTTCACGTAGATGTCATTaGCCAGCGCCACGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCSRRCH*PAPRCC
Trigger: ACAGCATCGTGGCGCTGGGCAATGACATCTACGTGA...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACGATGACTGTATGCCTTaGTCCCTCACTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHDDCMP*SLTSFC
Trigger: GCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATC...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GGACTTCCTTTAGAAGCAGTGGGACTCCTCACGCGCAGGCCCAGCAAGGGCTTGCCCCAGATGACTGTATaGCTTGCTCCCTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GLPLEAVGLLTRRPSKGLPQMTV*LAPSLP
Trigger: AGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGG...CAAGCCCTTGCTGGGCCTGCGCGTGAGGAGTCCCACTGCTTCTAAAGGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCAGACCCAGAAACATGTaGTGGCAGGAAAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGRPRNM*WQESGS
Trigger: AGAGCCACTTTCCTGCCAGCACATGTTTCTGGGTCT...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGCTTCTAAGGTCAAACTaGAAGCATTTTCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: LPRRGASYLHRGPCRARLLLRSN*KHFQLW
Trigger: CCAAAGTTGAAAATGCTTGCAGTTTGACCTTAGAAG...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTCTCAAGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCTCCCTGAGGGAGTTTaGACAGACCAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSRYRNLPGNGSWAGFATLPEGV*TDQEGP
Trigger: TGGCCCCTCCTGGTCTGTGCAAACTCCCTCAGGGAG...GGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACATGCTGCAGAGGCTGGTaGCTGGTTTTCCCCATACTT +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTCCRGW*LVFPIL
Trigger: AAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCA...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGGCATGTCCAGGCAGTTaGCCAGGTCGAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSNDIHSVWTGLLRSTREACPGS*PGRAAA
Trigger: AGCAGCAGCTCGACCTGGCCAACTGCCTGGACATGC...CTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTCTCAAGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCTTAGAGTCGCAGTCTTaGGGGCGAAGGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSRYRNLPGNGSWAGFATLESQS*GRRTRA
Trigger: CGCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAA...GGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp TCGCACCACAGCCCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGAGAAGGGGTGGACCCTaGTTGTCCTATTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: SHHSPHLSGRHKPGVRQLRRGGP*LSYSEH
Trigger: GTGTTCTGAATAGGACAACCAGGGTCCACCCCTTCT...CAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGGGCTGTGGTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CCAGCTCAGTGCCTGGAACGGTCAGGGATTGAGGGCGTAGCCAACCTTGTATGGCCATCACTGTCAGGCTaGGCACCCCTCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: PAQCLERSGIEGVANLVWPSLSG*APLFST
Trigger: TGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGG...CCATACAAGGTTGGCTACGCCCTCAATCCCTGACCGTTCCAGGCACTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGAAACTGAGGCTTGCATaGCTGACAGTGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLKLRLA*LTVAEL
Trigger: CAGCTCTGCCACTGTCAGCCATGCAAGCCTCAGTTT...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGTACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCACGCGCGAGTCTCTaGGTCATAGGCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: RYRNLPGNGSWAGFATQEPRASL*VIGLYH
Trigger: GTGGTAGAGGCCTATGACCCAGAGACTCGCGCGTGG...CTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGCCAGAAGGTGGGTTCTaGGAGCCGCCCCACCACGCT +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRPEGGF*EPPHHA
Trigger: AGCGTGGTGGGGCGGCTCCCAGAACCCACCTTCTGG...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGGATTGAGGGCGTAGCCAACCTTGTATGGCCAAACCCAGCCCTTACGCCCCTGCGTCCTCTCCCAAGGTaGGAACAAGTAGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GIEGVANLVWPNPALTPLRPLPR*EQVGAD
Trigger: ATCTGCACCTACTTGTTCCCACCTTGGGAGAGGACG...CAGGGGCGTAAGGGCTGGGTTTGGCCATACAAGGTTGGCTACGCCCTCAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTCCACACCTCTGGACATaGAATTTGGGACCCCACTTC +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCPHLWT*NLGPHF
Trigger: GAAGTGGGGTCCCAAATTCCATGTCCAGAGGTGTGG...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGCAGTCATCACAGTCTaGACAGCATGTCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCAVITV*TACPSV
Trigger: CACGGAAGGACATGCTGTCCAGACTGTGATGACTGC...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGTACATGTAACATGTaGCCATGCCCAGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTCTCNM*PCPGIP
Trigger: TGGGATGCCTGGGCATGGCCACATGTTACATGTACA...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCATGTACCTGATTCATaGACGGGATCTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: HKGVGHCPAEVPVTCTEAHVPDS*TGSCPI
Trigger: AATGGGACAAGATCCCGTCCATGAATCAGGTACATG...GGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000467612.5
CDS-3UTR TCA 90 bp AAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTAAACACTCATCACGATaGCACTTGGGTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: KGVGHCPAEVPVTCTEARKHSSR*HLGCKI
Trigger: GATTTTGCAACCCAAGTGTCATCGTGATGAGTGTTT...ACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCAAAGTATTCCCACACTaGCTTCCTCAGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTKVFPH*LPQEPA
Trigger: AGCTGGTTCCTGAGGAAGTCAGTGTGGGAATACTTT...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGTTCCCAAATTCGCTATaGCTATGTGCAGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTEFPNSL*LCAAYC
Trigger: GCAGTAAGCTGCACATAGTCATAGCGAATTTGGGAA...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR TCA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCAAATCAAACAAAGCTaGCCCTGTAGAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPQIKQS*PCRAPS
Trigger: AGAAGGAGCTCTACAGGGTCAGCTTTGTTTGATTTG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGCAGGGCCTCTGTACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACCTAACCCGACAGCAATaGCATCCACAGTGTATGGAC +
Preference number: 4 (lower is better)
Translates to: LQGLCTCCPSLEQVSPDDLTRQQ*HPQCMD
Trigger: GTCCATACACTGTGGATGTCATTGCTGTCGGGTTAG...GTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCGACAAGCTGCCCCGCTaGACTCCAACAACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTDKLPR*TPTTSG
Trigger: CCCAGAGGTTGTTGGAGTTCAGCGGGGCAGCTTGTC...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGTCCCAGCATCTATCCTaGAGTCAGTGTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTESQHLS*SQCKDI
Trigger: GATGTCTTTACACTGACTTCAGGATAGATGCTGGGA...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATCACGTCCAGGAACTTaGGCTCGGCGCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLSRPGT*ARRAAG
Trigger: GCCAGCTGCGCGCCGAGCGCAAGTTCCTGGACGTGA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCGGTCATAGCGCTCGGTaGTGTCGGCGGCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVGHSAR*CRRPPR
Trigger: ACGTGGTGGCCGCCGACAGCACCGAGCGCTATGACC...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp AGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGAGGCTGGGAGATGGAGCTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: SNDIHSVWTGLLRSTRERLGDGA*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAAGCTCCATCTCCCAG...CCTCTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTTTCGCTATGACTATGTaGAGCTTACTGCGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCFAMTM*SLLRGK
Trigger: TTTTCCCCGCAGTAAGCTGCACATAGTCATAGCGAA...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAACTGCACCGAGGCCCGTaGCGGGCCAGACTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKLHRGP*RARLGL
Trigger: TAGCCCCAGTCTGGCCCGGCACGGGCCTCGGTGCAG...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCACAAGGGACTTAAGTaGAATCTGCTAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: HKGVGHCPAEVPVTCTEAHKGLK*NLLSDS
Trigger: ACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTG...GGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GAGCTGGGCTCTGAACCGCGAGGCTGGATGATTCCTTCCATCTTTCCCAAATTCGGGTGCCCAGCTCAGTaGCTGGAACGGTCAGGGATT +
Preference number: 4 (lower is better)
Translates to: ELGSEPRGWMIPSIFPKFGCPAQ*LERSGI
Trigger: AATCCCTGACCGTTCCAGGCACTGAGCTGGGCACCC...GAATTTGGGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACATAAATATGTCAACCTaGCCGACCCTCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PCAQRSGALPRRGASYLHINMST*PTLWGE
Trigger: TTCACCCCAGAGGGTCGGGCAGGTTGACATATTTAT...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGGGCCACGGCACGCAGTaGTGGAGCAGTTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRGHGTQ*WSSCPW
Trigger: CCATGGACAACTGCTCCACCACTGCGTGCCGTGGCC...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACACTAACACTGCTCACATaGCCAAATGGCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTLTLLT*PNGTEA
Trigger: GGCTTCAGTGCCATTTGGCCATGTGAGCAGTGTTAG...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp CGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTCTGAACCGCGAGGCTaGATGATTCCTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RVLVHKGVGHCPAEVPVTSEPRG*MIPSIF
Trigger: AAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGA...GGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGGTCTGGGGCATGAACTaGCGGAAGATGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLVWGMN*RKMLTL
Trigger: CAGTGTCAGCATCTTCCGCCAGTTCATGCCCCAGAC...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CCA 90 bp CTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCTGCAGAAAGCTTTaGCAATGGGACTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LVRCSRFRPSSASWEDPFSCRKL*QWDFLD
Trigger: GTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGA...GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGAAGCCTCCCTGTCCCATCACTGTCAGGCTGGGCACCCCTCTTCTCAACAAGGACATCCACAGTGTATaGACTGGGCTCTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKPPCPITVRLGTPLLNKDIHSV*TGLLRS
Trigger: GCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTC...CTTGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGGGACAGGGAGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAAGGCCTGGACAGTGCTaGGCCCCCATCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLRPGQC*APILGL
Trigger: AAGGCCGAGGATGGGGGCCCAGCACTGTCCAGGCCT...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TGGAACAGGTGTCCCCAGATGACTGTATGCCTTGCTCCCTCACTTCCTTCTGCTCCAACAACCTCTGGGTaGGCTCAGCAGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: WNRCPQMTVCLAPSLPSAPTTSG*AQQPLG
Trigger: TCCTAGGGGCTGCTGAGCCCACCCAGAGGTTGTTGG...AGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp CAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTCATTGCTGCAGAGGCTaGTGCCTGGTTTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: QEKPRGCQAAAFTLLQKAHCCRG*CLVFPI
Trigger: TATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATG...AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGCCACTCATTCACGCTTaGGTTGTACCTCCACACGCA +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLPLIHA*VVPPHA
Trigger: TGCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGG...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR TCA 90 bp GGGCTGCTGGTGTATCTAAGAACACGCCAGGGTGCCCTGCTGCAGGGCCTCTGTCAGCCTTCTATTAATTaGGATGAGACCCACCCATCA +
Preference number: 4 (lower is better)
Translates to: GLLVYLRTRQGALLQGLCQPSIN*DETHPS
Trigger: TGATGGGTGGGTCTCATCTCAATTAATAGAAGGCTG...ACAGAGGCCCTGCAGCAGGGCACCCTGGCGTGTTCTTAGATACACCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCTTCCCAAATTCGCTATaGCTATGTGCAGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSFPNSL*LCAAYC
Trigger: GCAGTAAGCTGCACATAGTCATAGCGAATTTGGGAA...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR TCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCGCAGGGGGCTATGGCTaGGGAGGCCCAGCATCTGAT +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVAGGYG*GGPASD
Trigger: ATCAGATGCTGGGCCTCCTCAGCCATAGCCCCCTGC...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAACGCAGAATGAACCGCTaGGCCGCGCTCGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKRRMNR*AALASP
Trigger: GGGACTGGCGAGCGCGGCGCAGCGGTTCATTCTGCG...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGTCCGCTGCTCCAGGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCAGAACACACAGCAAGTaGTCAACACAAGTATTCCCA +
Preference number: 4 (lower is better)
Translates to: LVRCSRFRPSSASWEDPFRTHSK*STQVFP
Trigger: TGGGAATACTTGTGTTGAGCACTTGCTGTGTGTTCT...GAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACCTGGAGCAGCGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCCTATGTGCAGCTTACTaGGGGGAAAACAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCLCAAY*GENRTL
Trigger: CAGCGTTCTGTTTTCCCCGCAGTAAGCTGCACATAG...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR GCA 90 bp CAACCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTCAGCTGCATGTTCCATaGTGCCCACAGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPATPSGQHKGLKCNLLSQLHVP*CPQDSQ
Trigger: CTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTG...ACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CTGCAGGGCCTCTGTACCTGCTGTCCCTCTCTGGAACAGGTGTCCCCAGATGACCTTCCTTCTGCTCTCTaGCTCACAGCAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: LQGLCTCCPSLEQVSPDDLPSAL*LTADTQ
Trigger: TTGAGTATCTGCTGTGAGCCAGAGAGCAGAAGGAAG...GTCATCTGGGGACACCTGTTCCAGAGAGGGACAGCAGGTACAGAGGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGAAAGCAGCAGAGAGGCCAACCCCTTTCCAACACCCTGCCTAGGAGAACGGGCCTAACACTGCTCACATaGCCAAATGGCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RKQQRGQPLSNTLPRRTGLTLLT*PNGTEA
Trigger: GGCTTCAGTGCCATTTGGCCATGTGAGCAGTGTTAG...GCCCGTTCTCCTAGGCAGGGTGTTGGAAAGGGGTTGGCCTCTCTGCTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGCCACCCGAGAAGGTCTaGGGCATGAACTGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRPPEKV*GMNWRK
Trigger: CTTCCGCCAGTTCATGCCCCAGACCTTCTCGGGTGG...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGTTGTGCACAAAGGAGTaGGGCACTGCCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRLCTKE*GTAPQR
Trigger: CCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAA...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CAACCAGCCACGCCATCTGGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTTTTGATGTAAGCCCCTaGCAGGGGCCAGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QPATPSGQHKGLKCNLLSFDVSP*QGPGAR
Trigger: CCTAGCTCCTGGCCCCTGCCAGGGGCTTACATCAAA...ACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCCAGATGGCGTGGCTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTCCACAGTGTATGGACTaGGCTCTTGAGGAGCACGAG +
Preference number: 4 (lower is better)
Translates to: YRNLPGNGSWAGFATQEPPQCMD*ALEEHE
Trigger: CTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGG...AGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACCCAGAGTTCCACAGGGGCAAGGCCTCGCAGACCAGCCAAGCCCGAGATGCCGGTTTTCCCCATACTTaGTCTTCTAAACCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: NPEFHRGKASQTSQARDAGFPHT*SSKPKD
Trigger: GTCTTTGGGTTTAGAAGACCAAGTATGGGGAAAACC...GGCATCTCGGGCTTGGCTGGTCTGCGAGGCCTTGCCCCTGTGGAACTCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp AACTCAAGCCAAGGCTACTTTGGGTACTTTGAGGGGAAACTGACCATTTCCAAGCGCGGCCCGTGTAGCTaGAGTCCAGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSSQGYFGYFEGKLTISKRGPCS*SPAAAA
Trigger: TGCAGCTGCTGCTGGACTTCAGCTACACGGGCCGCG...CTTGGAAATGGTCAGTTTCCCCTCAAAGTACCCAAAGTAGCCTTGGCTTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATTGGCTGGGTGTCAATaGTCACCTCCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLLAGCQ*SPPRAS
Trigger: GGAGGCCCTGGGAGGTGATCATTGACACCCAGCCAA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAATCAAACAAAGCTaGCCCTGTAGAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRHPRACAPPVSPTCPCAQIKQS*PCRAPS
Trigger: AGAAGGAGCTCTACAGGGTCAGCTTTGTTTGATTTG...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACATCCCAGCATCTATCCTaGAGTCAGTGTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTSQHLS*SQCKDI
Trigger: GATGTCTTTACACTGACTTCAGGATAGATGCTGGGA...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAAGGTCATAGCGCTCGGTaGTGTCGGCGGCCACCACGT +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKGHSAR*CRRPPR
Trigger: ACGTGGTGGCCGCCGACAGCACCGAGCGCTATGACC...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CTGGACATGGAATTTGGGACCCCACTTCAGCCCGTCTGCCTGGTCCGCTGCTCCCACAAGGGACTTAAGTaGAATCTGCTAAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LDMEFGTPLQPVCLVRCSHKGLK*NLLSDS
Trigger: ACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTG...GGAGCAGCGGACCAGGCAGACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGCACAGGAAGCCCAGCTaGATGTTCCATGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRHRKPS*MFHAAH
Trigger: GTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTG...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp CAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTATAAATATGTCAACCTaGCCGACCCTCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: QEKPRGCQAAAFTLLQKAINMST*PTLWGE
Trigger: TTCACCCCAGAGGGTCGGGCAGGTTGACATATTTAT...AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCCCTCCCAGGAGTCAGTaGTGTGGTCATAGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVPPRSQ*CGHSAR
Trigger: CCGAGCGCTATGACCACACCACTGACTCCTGGGAGG...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATTAGAGTCGCAGTCTTaGGGGCGAAGGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLLESQS*GRRTRA
Trigger: CGCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAGCTGGGCTCTGAACCGCGAGGCTGGATGATTCCTTCCATCTTTCCCAAATTCCAAGTATTCCCACAGTaGGCTGGGCATGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ELGSEPRGWMIPSIFPKFQVFPQ*AGHGGS
Trigger: TGAGCCACCATGCCCAGCCCACTGTGGGAATACTTG...GAATTTGGGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTTCTGAACCGCGAGGCTaGATGATTCCTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSSEPRG*MIPSIF
Trigger: AAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGA...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCCAGCATGTCCTTCCGTaGGTGCCCAGCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVQHVLP*VPSSVP
Trigger: AGGCACTGAGCTGGGCACCCACGGAAGGACATGCTG...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCGCAGAGGCTGGTGCCTaGTTTTCCCCATACTTGGTC +
Preference number: 4 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTAEAGA*FSPYLV
Trigger: GACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGC...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GACAGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGCATTGCTGCAGAGGCTaGTGCCTGGTTTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: DSNDIHSVWTGLLRSTREHCCRG*CLVFPI
Trigger: TATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATG...CTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCGACATCCTTAAGTGGTaGAGACATGACAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ETFQVMDPGLASPPKSLCDILKW*RHDSPE
Trigger: TTCTGGGCTGTCATGTCTCCACCACTTAAGGATGTC...GCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGTGTAGCAGTCGACAGTaGCCAGCTCGTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRCSSRQ*PARHSP
Trigger: AGGACTGTGACGAGCTGGTCACTGTCGACTGCTACA...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp CTGAAGCCTCCCTGTCCCATCACTGTCAGGCTGGGCACCCCTCTTCTCAACAAGAGACTGTCTTCCTGCTaGGAACATCTCTACGAGTTA +
Preference number: 4 (lower is better)
Translates to: LKPPCPITVRLGTPLLNKRLSSC*EHLYEL
Trigger: TAACTCGTAGAGATGTTCTCAGCAGGAAGACAGTCT...CTTGTTGAGAAGAGGGGTGCCCAGCCTGACAGTGATGGGACAGGGAGGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCCAGCTGCATGTTCCATaGTGCCCACAGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVQLHVP*CPQDSQ
Trigger: CTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTG...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAACAAGCGCAGCTCTCCTaGACTGGCTCGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKQAQLS*TGSHHS
Trigger: GCTGTGGTGCGAGCCAGTGCAGGAGAGCTGCGCTTG...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAGCTGGGCTCTGAACCGCGAGGCTGGATGATTCCTTCCATCTTTCCCAAATTCCCCAGAAACATGTGCTaGCAGGAAAGTGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELGSEPRGWMIPSIFPKFPRNMC*QESGSS
Trigger: GGAAGAGCCACTTTCCTGCCAGCACATGTTTCTGGG...GAATTTGGGAAAGATGGAAGGAATCATCCAGCCTCGCGGTTCAGAGCCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACAAGAAAGCTTTGGCAATaGGACTTCTTAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTRKLWQ*DFLDWT
Trigger: TGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCT...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGCGAGATGCCCTGTGCTaGCAGTCATCACAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRRDALC*QSSQSG
Trigger: TCCAGACTGTGATGACTGCCAGCACAGGGCATCTCG...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR TCA 90 bp ACAGAAACCTTCCAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGAGACTGTCTTCCTGCTaGGAACATCTCTACGAGTTA +
Preference number: 4 (lower is better)
Translates to: TETFQVMDPGLASPPKSLRLSSC*EHLYEL
Trigger: TAACTCGTAGAGATGTTCTCAGCAGGAAGACAGTCT...CAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTGGAAGGTTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACATCAGTGAGCCTTAAGTaGAAAATAAGGGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SPPKSLCSSCEPNVSLCTSVSLK*KIRVRA
Trigger: TGCTCTTACCCTTATTTTGCACTTAAGGCTCACTGA...TGTGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGAACAGGTGTCCCCAGATGACTGTATGCCTTGCTCCCTCACTTCCTTCTGCTAGACCCAGAAACATGTaGTGGCAGGAAAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WNRCPQMTVCLAPSLPSARPRNM*WQESGS
Trigger: AGAGCCACTTTCCTGCCAGCACATGTTTCTGGGTCT...AGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCACCAAAGCCACCTCCTaGCCAGGACTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTTKATS*PGLPLE
Trigger: TTCTAAAGGAAGTCCTGGGCAGGAGGTGGCTTTGGT...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TGTAGGCAATATGATGTGTACCTCAGACTAACACTGCTCACATGGCCAAATGGCCAGGGCAAGCAACAGTaGCAGAGGGTGCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CRQYDVYLRLTLLTWPNGQGKQQ*QRVPGH
Trigger: GTGACCAGGCACCCTCTGGCACTGTTGCTTGCCCTG...GCCATTTGGCCATGTGAGCAGTGTTAGTCTGAGGTACACATCATATTGCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp AGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGAGGACAAACAAAATTAGCTaGGCGTGGTGGTGGGTACCT +
Preference number: 4 (lower is better)
Translates to: SNDIHSVWTGLLRSTRERTNKIS*AWWWVP
Trigger: AGGTACCCACCACCACGCCCAGCTAATTTTGTTTGT...CCTCTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATCAGAATCTCTGCAGTaGCCCTCTGGGCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLSESLQ*PSGLSS
Trigger: ACTGCTCAGCCCAGAGGGCCACTGCAGAGATTCTGA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGCCCTGTCAGGGGTCCTaGGACATATTAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRPCQGS*DILRQP
Trigger: TGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGG...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACTCAAGCCAAGGCTACTTTGGGTACTTTGAGGGGAAACTGACCATTTCCAAGGCCCAGCTCAGTGCCTaGAACGGTCAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: NSSQGYFGYFEGKLTISKAQLSA*NGQGLR
Trigger: CCTCAATCCCTGACCGTTCCAGGCACTGAGCTGGGC...CTTGGAAATGGTCAGTTTCCCCTCAAAGTACCCAAAGTAGCCTTGGCTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GAGGGGAAACTGACCATTTCCAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATCATGTACCTGATTCATaGACGGGATCTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: EGKLTISKRNPGAAKLRHHVPDS*TGSCPI
Trigger: AATGGGACAAGATCCCGTCCATGAATCAGGTACATG...ATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTGGAAATGGTCAGTTTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377658.8
CDS-3UTR TCA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTACCTGTGCTCCTCCTGTaGGCCCAACGTGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVPVLLL*AQRVLV
Trigger: CACAAGGACACGTTGGGCTCACAGGAGGAGCACAGG...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TTCCTGCTGAGAACATCTCTACGAGTTAGTTCACTAGAAAAGGCAATAAACATTTTCACGGCCGGGAACTaGAGCAGGTCGGCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: FLLRTSLRVSSLEKAINIFTAGN*SRSAAR
Trigger: GCGCGCCGCCGACCTGCTGCAGTTCCCGGCCGTGAA...AATGTTTATTGCCTTTTCTAGTGAACTAACTCGTAGAGATGTTCTCAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTAACAAGGGAGACAAGCTaGCCCGCTGAACTCCAACAA +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLTRETS*PAELQQ
Trigger: TTGTTGGAGTTCAGCGGGGCAGCTTGTCTCCCTTGT...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGGCAGCCCTGTCAGGGGTCCTGGGACATATTAAGGCAACCAGCCACGCCATCTAATTTACCTGATTCATaGACGGGATCTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RQPCQGSWDILRQPATPSNLPDS*TGSCPI
Trigger: AATGGGACAAGATCCCGTCCATGAATCAGGTAAATT...AGATGGCGTGGCTGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GGCCAGCACAAGGGACTTAAGTGCAATCTGCTAAGTGACAGTGCTAAGACTGTCTCTGGACATGGAATTTaGGACCCCACTTCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GQHKGLKCNLLSDSAKTVSGHGI*DPTSAR
Trigger: ACGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGA...GACAGTCTTAGCACTGTCACTTAGCAGATTGCACTTAAGTCCCTTGTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAAGGCTCCCCACACCTCTaGACATGGAATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKGSPHL*TWNLGP
Trigger: GGGTCCCAAATTCCATGTCCAGAGGTGTGGGGAGCC...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAATTTGATGTAAGCCCCTaGCAGGGGCCAGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKFDVSP*QGPGAR
Trigger: CCTAGCTCCTGGCCCCTGCCAGGGGCTTACATCAAA...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AGCAATGACATCCACAGTGTATGGACTGGGCTCTTGAGGAGCACGAGGGAGAGGTCCTGCAGAAAGCTTTaGCAATGGGACTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: SNDIHSVWTGLLRSTRERSCRKL*QWDFLD
Trigger: GTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGA...CCTCTCCCTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGGATGTCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCCATCACGATGACACTTaGGTTGCAAAATCAGGACCA +
Preference number: 4 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTHHDDT*VAKSGP
Trigger: TGGTCCTGATTTTGCAACCCAAGTGTCATCGTGATG...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp GCCATGCCCAGGCATCCCAGCATCTATCCTGAAGTCAGTGTAAAGACATCCTTATGTACATGTAACATGTaGCCATGCCCAGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: AMPRHPSIYPEVSVKTSLCTCNM*PCPGIP
Trigger: TGGGATGCCTGGGCATGGCCACATGTTACATGTACA...TAAGGATGTCTTTACACTGACTTCAGGATAGATGCTGGGATGCCTGGGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
3UTR CAA 72 bp TGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTTaGGCAATGGGACTTCTTAGACTGGACAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: CQAAAFTLLQKA*AMGLLRLDKSN
Trigger: GTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAATGCTGCAGAGGCTGGTaGCTGGTTTTCCCCATACTT +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKCCRGW*LVFPIL
Trigger: AAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCA...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp CCATTGCTGCAGAGGCTGGTGCCTGGTTTTCCCCATACTTGGTCTTCTAAACCCAGAAAGCTTTGGCAATaGGACTTCTTAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: PLLQRLVPGFPHTWSSKPRKLWQ*DFLDWT
Trigger: TGTCCAGTCTAAGAAGTCCCATTGCCAAAGCTTTCT...GGGTTTAGAAGACCAAGTATGGGGAAAACCAGGCACCAGCCTCTGCAGCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp AACTCAAGCCAAGGCTACTTTGGGTACTTTGAGGGGAAACTGACCATTTCCAAGCCCTGTCAGGGGTCCTaGGACATATTAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: NSSQGYFGYFEGKLTISKPCQGS*DILRQP
Trigger: TGGTTGCCTTAATATGTCCCAGGACCCCTGACAGGG...CTTGGAAATGGTCAGTTTCCCCTCAAAGTACCCAAAGTAGCCTTGGCTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp GACACTGGAGGGAGGGCGTCCTTTATTACATACGCGTCTCTGAAGTCATATAAAACTGGATGTGGACACTaGAGGGAGGGCGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: DTGGRASFITYASLKSYKTGCGH*REGVLY
Trigger: ATAAAGGACGCCCTCCCTCCAGTGTCCACATCCAGT...TTTATATGACTTCAGAGACGCGTATGTAATAAAGGACGCCCTCCCTCCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR GCA 90 bp TGGAACAGGTGTCCCCAGATGACTGTATGCCTTGCTCCCTCACTTCCTTCTGCTCTTCTAAGGTCAAACTaGAAGCATTTTCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: WNRCPQMTVCLAPSLPSALLRSN*KHFQLW
Trigger: CCAAAGTTGAAAATGCTTGCAGTTTGACCTTAGAAG...AGCAGAAGGAAGTGAGGGAGCAAGGCATACAGTCATCTGGGGACACCTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CCA 90 bp TTCCTGCTGAGAACATCTCTACGAGTTAGTTCACTAGAAAAGGCAATAAACATTAGCCGCCATGAACTGTaGTCATACCAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: FLLRTSLRVSSLEKAINISRHEL*SYQPGR
Trigger: ACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCT...AATGTTTATTGCCTTTTCTAGTGAACTAACTCGTAGAGATGTTCTCAGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CCA 90 bp TTCCTGCTGAGAACATCTCTACGAGTTAGTTCACTAGAAAAGGCAATAAACATTCCACAGTGTATGGACTaGGCTCTTGAGGAGCACGAG +
Preference number: 4 (lower is better)
Translates to: FLLRTSLRVSSLEKAINIPQCMD*ALEEHE
Trigger: CTCGTGCTCCTCAAGAGCCCAGTCCATACACTGTGG...AATGTTTATTGCCTTTTCTAGTGAACTAACTCGTAGAGATGTTCTCAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 90 bp CAGCGCGGACCCAGCGCAGCGCCAGCTGGTAGGCGGCCTCCTCCTTaGGCACACACAGCCCGTCGTCCCGCAGGTAGCGCAGCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: QRGPSAAPAGRRPPP*AHTARRPAGSAAGA
Trigger: CGCGCCTGCTGCGCTACCTGCGGGACGACGGGCTGTGTGTGCCCAAGGAGGAGGCCGCCTACCAGCTGGCGCTGCGCTGGGTCCGCGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 90 bp CCTGGTCGCAGCCGCCCACGAGCACGAGGATCTCGGCGAGACCGGTaGACGGGCGAGGACGCATTCGGGGACAGGGCCCGCGGTCGTGGC +
Preference number: 5 (lower is better)
Translates to: PGRSRPRARGSRRDR*TGEDAFGDRARGRG
Trigger: GCCACGACCGCGGGCCCTGTCCCCGAATGCGTCCTCGCCCGTCCACCGGTCTCGCCGAGATCCTCGTGCTCGTGGGCGGCTGCGACCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 90 bp TGCTGCTGCAGGAAGGCCCCGCACGCCTCCTTCACGGCCGGGAACTaGAGCAGGTCGGCGGCGCGCAGCAGCGGCTCAGCGTTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: CCCRKAPHASFTAGN*SRSAARSSGSALSP
Trigger: CGGCGACAACGCTGAGCCGCTGCTGCGCGCCGCCGACCTGCTGCAGTTCCCGGCCGTGAAGGAGGCGTGCGGGGCCTTCCTGCAGCAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 90 bp AGCTGCTCGGCGCCCAGCTCGCCCACGTGGCGCAGAATGAACCGCTaGGCCGCGCTCGCCAGTCCCGAGCAGCTGAAGGCCTCAGCGAAG +
Preference number: 5 (lower is better)
Translates to: SCSAPSSPTWRRMNR*AALASPEQLKASAK
Trigger: CTTCGCTGAGGCCTTCAGCTGCTCGGGACTGGCGAGCGCGGCGCAGCGGTTCATTCTGCGCCACGTGGGCGAGCTGGGCGCCGAGCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGGCCCCGGCGCCTTCGATAGGTaGTCGAGGACGCCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: QEAQLHVPCCPQDSQPGPGAFDR*SRTPRP
Trigger: CGGCCGCGGCGTCCTCGACAACCTATCGAAGGCGCC...GGGGCCTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGTGCATGTCCAGGCAGTaGGCCAGGTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPCMSRQ*ARSSCC
Trigger: GCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCA...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGCAGCTACTCGGGAGGTaGAGGCGGGAGAATGGCGTG +
Preference number: 5 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPQLLGR*RRENGV
Trigger: CACGCCATTCTCCCGCCTCAACCTCCCGAGTAGCTG...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS TCA 90 bp GCGGCTCAGCGTTGTCGCCGCTTACCGCCACGCGGCCCGTGTAGCTaGAGTCCAGCAGCAGCTGCAGCATGTCGGGAGGCACTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: AAQRCRRLPPRGPCS*SPAAAAACREALRA
Trigger: TGCACGGAGTGCCTCCCGACATGCTGCAGCTGCTGCTGGACTTCAGCTACACGGGCCGCGTGGCGGTAAGCGGCGACAACGCTGAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 90 bp CAGCCAGGGAGCCGATGGCATAGAGCCGGCCACGGCACGCAGTGGTaGAGCAGTTGTCCATGGGGTAGGTCATGGGCTGCAGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QPGSRWHRAGHGTQW*SSCPWGRSWAAGPP
Trigger: GGGAGGCCCTGCAGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGTGCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS-3UTR CAA 90 bp GGTTCAGGCCATCCTCAGCCTCATGGGAGGACCCCTTCTCCCTTCACGCGTCCCGGCGCCTTCGATAGGTaGTCGAGGACGCCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GSGHPQPHGRTPSPFTRPGAFDR*SRTPRP
Trigger: CGGCCGCGGCGTCCTCGACAACCTATCGAAGGCGCC...GGGACGCGTGAAGGGAGAAGGGGTCCTCCCATGAGGCTGAGGATGGCCTGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGTTTAGAGTCGCAGTCTaGGGGGCGAAGGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPFRVAV*GAKDQG
Trigger: GCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAAA...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGTCGTTCCTCGTCGGGTaGTACACGTCCACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LPRRGASYLHRGPCRARLSFLVG*YTSTSA
Trigger: CGCTGAGGTGGACGTGTACAACCCGACGAGGAACGA...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS CCA 90 bp TGCCAGCCAGGGAGCCGATGGCATAGAGCCGGCCACGGCACGCAGTaGTGGAGCAGTTGTCCATGGGGTAGGTCATGGGCTGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: CQPGSRWHRAGHGTQ*WSSCPWGRSWAAGP
Trigger: AGGCCCTGCAGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGTGCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS-3UTR CAA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTTCGTTCCTCGTCGGGTaGTACACGTCCACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTSFLVG*YTSTSA
Trigger: CGCTGAGGTGGACGTGTACAACCCGACGAGGAACGA...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS TCA 90 bp CCAGGTAGCGCCACTGACCCGTCTGCGGGTTGTAGCAGTCGACAGTaGCCAGCTCGTCACAGTCCTGGTCGCAGCCGCCCACGAGCACGA +
Preference number: 5 (lower is better)
Translates to: PGSATDPSAGCSSRQ*PARHSPGRSRPRAR
Trigger: TCGTGCTCGTGGGCGGCTGCGACCAGGACTGTGACGAGCTGGTCACTGTCGACTGCTACAACCCGCAGACGGGTCAGTGGCGCTACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 90 bp ACAGGTCGGTGTCCGGGTCGTAGCACTGCATCACCATGGTCTCCTTaGCAGCCAGGGAGCCGATGGCATAGAGCCGGCCACGGCACGCAG +
Preference number: 5 (lower is better)
Translates to: TGRCPGRSTASPWSP*QPGSRWHRAGHGTQ
Trigger: CTGCGTGCCGTGGCCGGCTCTATGCCATCGGCTCCCTGGCTGGCAAGGAGACCATGGTGATGCAGTGCTACGACCCGGACACCGACCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CCA 90 bp GTCATTGCCCAGCGCCACGATGCTGTAGCCTCCGCCCAGGTGGTCTaGGAACTCGGCCAGGTAGCGCCACTGACCCGTCTGCGGGTTGTA +
Preference number: 5 (lower is better)
Translates to: VIAQRHDAVASAQVV*ELGQVAPLTRLRVV
Trigger: TACAACCCGCAGACGGGTCAGTGGCGCTACCTGGCCGAGTTCCCAGACCACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCAATGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 90 bp CCAGCGACCACAGGTCGGTGTCCGGGTCGTAGCACTGCATCACCATaGTCTCCTTGCCAGCCAGGGAGCCGATGGCATAGAGCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PATTGRCPGRSTASP*SPCQPGSRWHRAGH
Trigger: GTGGCCGGCTCTATGCCATCGGCTCCCTGGCTGGCAAGGAGACCATGGTGATGCAGTGCTACGACCCGGACACCGACCTGTGGTCGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS-3UTR CAA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGAGGGGTGGACCCTGGTaGTCCTATTCAGAACACACA +
Preference number: 5 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGRGGPW*SYSEHT
Trigger: TGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCT...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CAA 90 bp ATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCCCCAGAGGGGTGGCCTaGGCTCTCCCAGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: MDPGLASPPKSLCSSCEPPRGVA*ALPESS
Trigger: GCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGGG...GGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS GCA 90 bp CATCGGACCCACCCGTCACGTAGATGTCATTGCCCAGCGCCACGATaGTGTAGCCTCCGCCCAGGTGGTCTGGGAACTCGGCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: HRTHPSRRCHCPAPR*CSLRPGGLGTRPGS
Trigger: GCTACCTGGCCGAGTTCCCAGACCACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCAATGACATCTACGTGACGGGTGGGTCCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 90 bp GCGTTAACTTTAGTCGGCTTCACGCGCAGTTGTAGTTTCCGAGTCTaGGTCGCAGCTGCAGGCTCCGGGGCTGCCCGCCCTAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ALTLVGFTRSCSFRV*VAAAGSGAARPRGS
Trigger: GGAGCCCCTAGGGCGGGCAGCCCCGGAGCCTGCAGCTGCGACGCAGACTCGGAAACTACAACTGCGCGTGAAGCCGACTAAAGTTAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610898.1
CDS CCA 90 bp TGTCCATGGGGTAGGTCATGGGCTGCAGGGCCTCCCAGGAGTCAGTaGTGTGGTCATAGCGCTCGGTGCTGTCGGCGGCCACCACGTACA +
Preference number: 5 (lower is better)
Translates to: CPWGRSWAAGPPRSQ*CGHSARCCRRPPRT
Trigger: TGTACGTGGTGGCCGCCGACAGCACCGAGCGCTATGACCACACCACTGACTCCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS-3UTR CAA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCAGTCACGTCCAGGAACTaGCGCTCGGCGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTAVTSRN*RSARSW
Trigger: CCAGCTGCGCGCCGAGCGCAAGTTCCTGGACGTGAC...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGGGTCATTCACGCTTGAGTaGTACCTCCACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: APQRCQLPAPRPVPGQTGSFTLE*YLHTQS
Trigger: TGACTGCGTGTGGAGGTACAACTCAAGCGTGAATGA...CCCAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCCCACTCATTCACGCTaGAGTTGTACCTCCACACGC +
Preference number: 5 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTPTHSR*SCTSTR
Trigger: GCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGGG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp GAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGTTCATGGACGGGATCTaGTCCCATTCGTTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: EWGTAPQRCQLPAPRPVPFMDGI*SHSFLV
Trigger: GACGAGGAACGAATGGGACAAGATCCCGTCCATGAA...CGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp GGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCAGGGGTGGACCCTGGTaGTCCTATTCAGAACACACA +
Preference number: 5 (lower is better)
Translates to: GVGHCPAEVPVTCTEARARGGPW*SYSEHT
Trigger: TGTGTGTTCTGAATAGGACAACCAGGGTCCACCCCT...GGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CAA 90 bp CCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACTTTAGAGTCGCAGTCTaGGGGGCGAAGGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: PCAQRSGALPRRGASYLHFRVAV*GAKDQG
Trigger: GCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAAA...GTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp CTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGCTCCTGCAGAAAGCTTaGGCAATGGGACTTCTTAGA +
Preference number: 5 (lower is better)
Translates to: LPRRGASYLHRGPCRARLLLQKA*AMGLLR
Trigger: TCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAG...CAGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCGCCCCTGGCTCCGGTaGCTCTCGAGGAGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: VMDPGLASPPKSLCSSCERPWLR*LSRSFR
Trigger: CCTAAAACTCCTCGAGAGCAACCGGAGCCAGGGGCG...CTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467612.5
CDS-3UTR CAA 90 bp CCCAACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGCCCACTCATTCACGCTaGAGTTGTACCTCCACACGC +
Preference number: 5 (lower is better)
Translates to: PNVSLCTKEWGTAPQRCQPTHSR*SCTSTR
Trigger: GCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGGG...CTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp CCTCATCTGAGTGGCCGACACAAGCCTGGAGTACGGCAGCTGCCAACCACAGCATCGTTCCTCGTCGGGTaGTACACGTCCACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PHLSGRHKPGVRQLPTTASFLVG*YTSTSA
Trigger: CGCTGAGGTGGACGTGTACAACCCGACGAGGAACGA...TGCTGTGGTTGGCAGCTGCCGTACTCCAGGCTTGTGTCGGCCACTCAGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCTTCATGGACGGGATCTaGTCCCATTCGTTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: HKGVGHCPAEVPVTCTEAFMDGI*SHSFLV
Trigger: GACGAGGAACGAATGGGACAAGATCCCGTCCATGAA...GGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
CDS-3UTR CAA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTGAGAGTTCAAATGTATaGTCGTATCCCCCAGAGACG +
Preference number: 5 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTESSNV*SYPPET
Trigger: CGTCTCTGGGGGATACGACAATACATTTGAACTCTC...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CAA 90 bp ACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCCGTGCCGGGCCAGACTCTCCTGCAGAAAGCTTaGGCAATGGGACTTCTTAGA +
Preference number: 5 (lower is better)
Translates to: TAPQRCQLPAPRPVPGQTLLQKA*AMGLLR
Trigger: TCTAAGAAGTCCCATTGCCAAAGCTTTCTGCAGGAG...AGTCTGGCCCGGCACGGGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCAGCCAGGGCGTTCTAGGATGCATGTCCAGGCAGTaGGCCAGGTCGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QARRAAMNCGHTSQGVLGCMSRQ*ARSSCC
Trigger: GCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCA...TCCTAGAACGCCCTGGCTGGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGCCCACTCATTCACGCTaGAGTTGTACCTCCACACGC +
Preference number: 5 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQPTHSR*SCTSTR
Trigger: GCGTGTGGAGGTACAACTCAAGCGTGAATGAGTGGG...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTCTCTGGACATGGAATTaGGGACCCCACTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCLWTWN*GPHFSP
Trigger: CGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAG...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTCCTTGTGCACTCTGGACATGGAATTaGGGACCCCACTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LRHPRACAPPVSPTCPCALWTWN*GPHFSP
Trigger: CGGGCTGAAGTGGGGTCCCAAATTCCATGTCCAGAG...TGCACAAGGACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp ACTGCAAGCATTTTCAACTTTGGAACCAACCACCAAAGCCACCTCCTGCCCAGGAGCAGCGGCTCAGCGTaGTCGCCGCTTACCGCCACG +
Preference number: 5 (lower is better)
Translates to: TASIFNFGTNHQSHLLPRSSGSA*SPLTAT
Trigger: CGTGGCGGTAAGCGGCGACAACGCTGAGCCGCTGCT...CCTGGGCAGGAGGTGGCTTTGGTGGTTGGTTCCAAAGTTGAAAATGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp TGGAAGATGACCATGACCCAAGCGAGAAGAGCCGCCATGAACTGTGGTCATACCCCCAGAGGGGTGGCCTaGGCTCTCCCAGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: WKMTMTQARRAAMNCGHTPRGVA*ALPESS
Trigger: GCTGCTTTCTGGGAGAGCCAAGGCCACCCCTCTGGG...GGTATGACCACAGTTCATGGCGGCTCTTCTCGCTTGGGTCATGGTCATCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CAA 90 bp GGTCACAGGAAGCCCAGCTGCATGTTCCATGCTGCCCACAGGACTCCCAGCCAGTCATTCACGCTTGAGTaGTACCTCCACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: GHRKPSCMFHAAHRTPSQSFTLE*YLHTQS
Trigger: TGACTGCGTGTGGAGGTACAACTCAAGCGTGAATGA...CTGGCTGGGAGTCCTGTGGGCAGCATGGAACATGCAGCTGGGCTTCCTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTGAGCCCAACGTGTGAGAGTTCAAATGTATaGTCGTATCCCCCAGAGACG +
Preference number: 5 (lower is better)
Translates to: LGWLRHPRACAPPVSPTCESSNV*SYPPET
Trigger: CGTCTCTGGGGGATACGACAATACATTTGAACTCTC...ACACGTTGGGCTCACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS-3UTR CAA 90 bp CAGGTAATGGATCCTGGGCTGGCTTCGCCACCCAAGAGCCTGTGCTCCTCCTGTACGATGACACTTGGGTaGCAAAATCAGGACCAGCCT +
Preference number: 5 (lower is better)
Translates to: QVMDPGLASPPKSLCSSCTMTLG*QNQDQP
Trigger: AGGCTGGTCCTGATTTTGCAACCCAAGTGTCATCGT...ACAGGAGGAGCACAGGCTCTTGGGTGGCGAAGCCAGCCCAGGATCCATTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CAA 90 bp CACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGGCCTCACGGAGTGTAGGTTaGGAAATGTTAACAGACACA +
Preference number: 5 (lower is better)
Translates to: HKGVGHCPAEVPVTCTEASRSVG*EMLTDT
Trigger: TGTGTCTGTTAACATTTCCAAACCTACACTCCGTGA...GGCCTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS-3UTR CAA 90 bp GGAGGACAGACACAGGAGAGGGCACAATCCCAAGCGCAGCTCTCCTGCACTGGCGAGAGTTCAAATGTATaGTCGTATCCCCCAGAGACG +
Preference number: 5 (lower is better)
Translates to: GGQTQERAQSQAQLSCTGESSNV*SYPPET
Trigger: CGTCTCTGGGGGATACGACAATACATTTGAACTCTC...GCCAGTGCAGGAGAGCTGCGCTTGGGATTGTGCCCTCTCCTGTGTCTGTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp AACTCAAGCCAAGGCTACTTTGGGTACTTTGAGGGGAAACTGACCATTTCCAAGGTCACGTCCAGGAACTaGCGCTCGGCGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NSSQGYFGYFEGKLTISKVTSRN*RSARSW
Trigger: CCAGCTGCGCGCCGAGCGCAAGTTCCTGGACGTGAC...CTTGGAAATGGTCAGTTTCCCCTCAAAGTACCCAAAGTAGCCTTGGCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp CAAGAGAAACCCAGGGGCTGCCAAGCTGCGGCATTCACCCTCCTGCAGAAAGCTTCATTCACGCTTGAGTaGTACCTCCACACGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QEKPRGCQAAAFTLLQKASFTLE*YLHTQS
Trigger: TGACTGCGTGTGGAGGTACAACTCAAGCGTGAATGA...AGCTTTCTGCAGGAGGGTGAATGCCGCAGCTTGGCAGCCCCTGGGTTTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS-3UTR CAA 90 bp GTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTACCTGCACCGAGTCACGGAGTGTAGGTTaGGAAATGTTAACAGACACA +
Preference number: 5 (lower is better)
Translates to: VHKGVGHCPAEVPVTCTESRSVG*EMLTDT
Trigger: TGTGTCTGTTAACATTTCCAAACCTACACTCCGTGA...CTCGGTGCAGGTAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377663.3
ENST00000610898.1
CDS CCA 90 bp CACCCATCATGGCTGTGGATCCCAAACACTCATCACGATGACACTTaGGTTGCAAAATCAGGACCAGCCTGTGCTTCCAATGCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: HPSWLWIPNTHHDDT*VAKSGPACASNAGP
Trigger: CGGGCCAGCATTGGAAGCACAGGCTGGTCCTGATTTTGCAACCCAAGTGTCATCGTGATGAGTGTTTGGGATCCACAGCCATGATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CAA 90 bp AACGTGTCCTTGTGCACAAAGGAGTGGGGCACTGCCCCGCAGAGGTGCCAGTTAGAGAGTTCAAATGTATaGTCGTATCCCCCAGAGACG +
Preference number: 5 (lower is better)
Translates to: NVSLCTKEWGTAPQRCQLESSNV*SYPPET
Trigger: CGTCTCTGGGGGATACGACAATACATTTGAACTCTC...TAACTGGCACCTCTGCGGGGCAGTGCCCCACTCCTTTGTGCACAAGGACACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000467612.5
ENST00000610898.1
CDS CCA 90 bp GCCTGTGCTTCCAATGCTGGCCCGCCTGAAAATTTACCTGATTCATaGACGGGATCTTGTCCCATTCGTTCCTCGTCGGGTTGTACACGT +
Preference number: 5 (lower is better)
Translates to: ACASNAGPPENLPDS*TGSCPIRSSSGCTR
Trigger: ACGTGTACAACCCGACGAGGAACGAATGGGACAAGATCCCGTCCATGAATCAGGTAAATTTTCAGGCGGGCCAGCATTGGAAGCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CAA 90 bp TGTAGGCAATATGATGTGTACCTCAGACTAACACTGCTCACATGGCCAAATGGCTTTAGAGTCGCAGTCTaGGGGGCGAAGGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: CRQYDVYLRLTLLTWPNGFRVAV*GAKDQG
Trigger: GCCCTGGTCCTTCGCCCCCAAGACTGCGACTCTAAA...GCCATTTGGCCATGTGAGCAGTGTTAGTCTGAGGTACACATCATATTGCCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS-3UTR CAA 90 bp GCTTTGGCAATGGGACTTCTTAGACTGGACAAATCAAACAAAGCTGACCCTGTATTCATGGACGGGATCTaGTCCCATTCGTTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: ALAMGLLRLDKSNKADPVFMDGI*SHSFLV
Trigger: GACGAGGAACGAATGGGACAAGATCCCGTCCATGAA...TACAGGGTCAGCTTTGTTTGATTTGTCCAGTCTAAGAAGTCCCATTGCCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp CCCGTCGTCCCGCAGGTAGCGCAGCAGGCGCGCCAGTaGCAGCCGCTCCAGCTGCTCGGCGCCCAGCTCGCC +
Preference number: 6 (lower is better)
Translates to: PVVPQVAQQARQ*QPLQLLGAQLA
Trigger: GGCGAGCTGGGCGCCGAGCAGCTGGAGCGGCTGCCACTGGCGCGCCTGCTGCGCTACCTGCGGGACGACGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp GAAGTCGCGCGCCTCGCGCAGCAGGCGCAGGCAGGGTaGGCAGCGCGCCACCAGCGGCTCGGCCTCGACGTG +
Preference number: 6 (lower is better)
Translates to: EVARLAQQAQAG*AARHQRLGLDV
Trigger: CACGTCGAGGCCGAGCCGCTGGTGGCGCGCTGCCCACCCTGCCTGCGCCTGCTGCGCGAGGCGCGCGACTTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp TCCAGCAGCAGCTGCAGCATGTCGGGAGGCACTCCGTaGAGGCGCACCCGCTCGGCGCGGCTCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSSCSMSGGTP*RRTRSARLSRS
Trigger: GCTGCGCGAGAGCCGCGCCGAGCGGGTGCGCCTGCACGGAGTGCCTCCCGACATGCTGCAGCTGCTGCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp GCGCCCAGCTCGCCCACGTGGCGCAGAATGAACCGCTaGGCCGCGCTCGCCAGTCCCGAGCAGCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: APSSPTWRRMNR*AALASPEQLKA
Trigger: GGCCTTCAGCTGCTCGGGACTGGCGAGCGCGGCGCAGCGGTTCATTCTGCGCCACGTGGGCGAGCTGGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp AGGGTCACGTCCAGGAACTTGCGCTCGGCGCGCAGCTaGCTCAGGCCGCGCAGCAGGCTCAGGGCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: RVTSRNLRSARS*LRPRSRLRACA
Trigger: CGCGCACGCCCTGAGCCTGCTGCGCGGCCTGAGCCAGCTGCGCGCCGAGCGCAAGTTCCTGGACGTGACCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp AGCCGCCCACGAGCACGAGGATCTCGGCGAGACCGGTaGACGGGCGAGGACGCATTCGGGGACAGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SRPRARGSRRDR*TGEDAFGDRAR
Trigger: GCGGGCCCTGTCCCCGAATGCGTCCTCGCCCGTCCACCGGTCTCGCCGAGATCCTCGTGCTCGTGGGCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CAA 72 bp CAGGGGCGCCGGTCGCTCCATGGCGCCTTCGATAGGTaGTCGAGGACGCCGCGGCCGGGGCCTGCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: QGRRSLHGAFDR*SRTPRPGPAER
Trigger: TCTCTCCGCAGGCCCCGGCCGCGGCGTCCTCGACAACCTATCGAAGGCGCCATGGAGCGACCGGCGCCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp CCCAGCGCAGCGCCAGCTGGTAGGCGGCCTCCTCCTTaGGCACACACAGCCCGTCGTCCCGCAGGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: PSAAPAGRRPPP*AHTARRPAGSA
Trigger: TGCGCTACCTGCGGGACGACGGGCTGTGTGTGCCCAAGGAGGAGGCCGCCTACCAGCTGGCGCTGCGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp TGCATGTCCAGGCAGTTGGCCAGGTCGAGCTGCTGCTaGAGGAAGGCCCCGCACGCCTCCTTCACGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CMSRQLARSSCC*RKAPHASFTAG
Trigger: CCCGGCCGTGAAGGAGGCGTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp GCCGGCCACGGCACGCAGTGGTGGAGCAGTTGTCCATaGGGTAGGTCATGGGCTGCAGGGCCTCCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: AGHGTQWWSSCP*GRSWAAGPPRS
Trigger: ACTCCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGTGCCGTGGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS TCA 72 bp CGTTGTCGCCGCTTACCGCCACGCGGCCCGTGTAGCTaGAGTCCAGCAGCAGCTGCAGCATGTCGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: RCRRLPPRGPCS*SPAAAAACREA
Trigger: TGCCTCCCGACATGCTGCAGCTGCTGCTGGACTTCAGCTACACGGGCCGCGTGGCGGTAAGCGGCGACAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp GGTAGGTCATGGGCTGCAGGGCCTCCCAGGAGTCAGTaGTGTGGTCATAGCGCTCGGTGCTGTCGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: GRSWAAGPPRSQ*CGHSARCCRRP
Trigger: TGGCCGCCGACAGCACCGAGCGCTATGACCACACCACTGACTCCTGGGAGGCCCTGCAGCCCATGACCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS TCA 72 bp GCCACTGACCCGTCTGCGGGTTGTAGCAGTCGACAGTaGCCAGCTCGTCACAGTCCTGGTCGCAGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: ATDPSAGCSSRQ*PARHSPGRSRP
Trigger: TGGGCGGCTGCGACCAGGACTGTGACGAGCTGGTCACTGTCGACTGCTACAACCCGCAGACGGGTCAGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp AAGTCCTGCATGTCCAGGCAGTTGGCCAGGTCGAGCTaGTGCTGCAGGAAGGCCCCGCACGCCTCCTTCACG +
Preference number: 6 (lower is better)
Translates to: KSCMSRQLARSS*CCRKAPHASFT
Trigger: CGTGAAGGAGGCGTGCGGGGCCTTCCTGCAGCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCAGGACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp GCCAGTCCCGAGCAGCTGAAGGCCTCAGCGAAGTCCTaGATGTCCAGGCAGTTGGCCAGGTCGAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASPEQLKASAKS*MSRQLARSSCC
Trigger: GCAGCAGCTCGACCTGGCCAACTGCCTGGACATGCAGGACTTCGCTGAGGCCTTCAGCTGCTCGGGACTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp GGGAGCCATCGGACCCACCCGTCACGTAGATGTCATTaGCCAGCGCCACGATGCTGTAGCCTCCGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: GSHRTHPSRRCH*PAPRCCSLRPG
Trigger: ACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCAATGACATCTACGTGACGGGTGGGTCCGATGGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS GCA 72 bp CCTCCCAGGAGTCAGTGGTGTGGTCATAGCGCTCGGTaGTGTCGGCGGCCACCACGTACAGCAGTCCGTCCA +
Preference number: 6 (lower is better)
Translates to: PPRSQWCGHSAR*CRRPPRTAVRP
Trigger: TGGACGGACTGCTGTACGTGGTGGCCGCCGACAGCACCGAGCGCTATGACCACACCACTGACTCCTGGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS GCA 72 bp TTAGTCGGCTTCACGCGCAGTTGTAGTTTCCGAGTCTaGGTCGCAGCTGCAGGCTCCGGGGCTGCCCGCCCT +
Preference number: 6 (lower is better)
Translates to: LVGFTRSCSFRV*VAAAGSGAARP
Trigger: AGGGCGGGCAGCCCCGGAGCCTGCAGCTGCGACGCAGACTCGGAAACTACAACTGCGCGTGAAGCCGACTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610898.1
CDS CCA 72 bp ACCACGTACAGCAGTCCGTCCAGCACAGAGGAGCTGTaGTACTCGCGGGCCTTCAGCATGGGCGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: TTYSSPSSTEEL*YSRAFSMGATS
Trigger: GGAGGTGGCGCCCATGCTGAAGGCCCGCGAGTACCACAGCTCCTCTGTGCTGGACGGACTGCTGTACGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CCA 72 bp GGGAGCCGATGGCATAGAGCCGGCCACGGCACGCAGTaGTGGAGCAGTTGTCCATGGGGTAGGTCATGGGCT +
Preference number: 6 (lower is better)
Translates to: GSRWHRAGHGTQ*WSSCPWGRSWA
Trigger: AGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGTGCCGTGGCCGGCTCTATGCCATCGGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS GCA 72 bp CACCCGTCACGTAGATGTCATTGCCCAGCGCCACGATaGTGTAGCCTCCGCCCAGGTGGTCTGGGAACTCGG +
Preference number: 6 (lower is better)
Translates to: HPSRRCHCPAPR*CSLRPGGLGTR
Trigger: CCGAGTTCCCAGACCACCTGGGCGGAGGCTACAGCATCGTGGCGCTGGGCAATGACATCTACGTGACGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377658.8
ENST00000377663.3
CDS CCA 72 bp AGCCGATGGCATAGAGCCGGCCACGGCACGCAGTGGTaGAGCAGTTGTCCATGGGGTAGGTCATGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SRWHRAGHGTQW*SSCPWGRSWAA
Trigger: TGCAGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGTGCCGTGGCCGGCTCTATGCCATCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CCA 72 bp ACGCAGTGGTGGAGCAGTTGTCCATGGGGTAGGTCATaGGCTGCAGGGCCTCCCAGGAGTCAGTGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: TQWWSSCPWGRS*AAGPPRSQWCG
Trigger: ACCACACCACTGACTCCTGGGAGGCCCTGCAGCCCATGACCTACCCCATGGACAACTGCTCCACCACTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CCA 72 bp ACAGGTCGGTGTCCGGGTCGTAGCACTGCATCACCATaGTCTCCTTGCCAGCCAGGGAGCCGATGGCATAGA +
Preference number: 6 (lower is better)
Translates to: TGRCPGRSTASP*SPCQPGSRWHR
Trigger: TCTATGCCATCGGCTCCCTGGCTGGCAAGGAGACCATGGTGATGCAGTGCTACGACCCGGACACCGACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CAA 72 bp ATGGACGGGATCTTGTCCCATTCGTTCCTCGTCGGGTaGTACACGTCCACCTCAGCGGAGTCATCCCTGACA +
Preference number: 6 (lower is better)
Translates to: MDGILSHSFLVG*YTSTSAESSLT
Trigger: TGTCAGGGATGACTCCGCTGAGGTGGACGTGTACAACCCGACGAGGAACGAATGGGACAAGATCCCGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377658.8
ENST00000377663.3
ENST00000463043.1
ENST00000467612.5
ENST00000496707.5
CDS CAA 90 bp CATCATGGCTGTGGATCCCAAACACTCATCACGATGACACTTGGGTaGCAAAATCAGGACCAGCCTGTGCTTCCAATGCTGGCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: HHGCGSQTLITMTLG*QNQDQPVLPMLARL
Trigger: CAGGCGGGCCAGCATTGGAAGCACAGGCTGGTCCTGATTTTGCAACCCAAGTGTCATCGTGATGAGTGTTTGGGATCCACAGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS TCA 72 bp CCCATCATGGCTGTGGATCCCAAACACTCATCACGATaGCACTTGGGTTGCAAAATCAGGACCAGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: PIMAVDPKHSSR*HLGCKIRTSLC
Trigger: GCACAGGCTGGTCCTGATTTTGCAACCCAAGTGTCATCGTGATGAGTGTTTGGGATCCACAGCCATGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS CCA 72 bp TCCAATGCTGGCCCGCCTGAAAATTTACCTGATTCATaGACGGGATCTTGTCCCATTCGTTCCTCGTCGGGT +
Preference number: 6 (lower is better)
Translates to: SNAGPPENLPDS*TGSCPIRSSSG
Trigger: ACCCGACGAGGAACGAATGGGACAAGATCCCGTCCATGAATCAGGTAAATTTTCAGGCGGGCCAGCATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3
CDS CCA 72 bp TGGCTGTGGATCCCAAACACTCATCACGATGACACTTaGGTTGCAAAATCAGGACCAGCCTGTGCTTCCAAT +
Preference number: 6 (lower is better)
Translates to: WLWIPNTHHDDT*VAKSGPACASN
Trigger: ATTGGAAGCACAGGCTGGTCCTGATTTTGCAACCCAAGTGTCATCGTGATGAGTGTTTGGGATCCACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377663.3