RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL15 (Homo sapiens)

Ensembl gene IDs: ENSG00000174010

Ensembl transcript IDs: ENST00000328046.8

Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGTCTGGTATTACCTAAATGCTCTTTAAAAGTGCTTGCATGCTaGAGGGCCAGAACTTGTCATATACCACTCCGATTCTCACTAAAA +
Preference number: 1 (lower is better)
Translates to: RSLVLPKCSLKVLAC*RARTCHIPLRFSLK
Trigger: TTTTAGTGAGAATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAGCATTTAGGTAATACCAGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR GCA 90 bp TTGGCCTCTGTCTTTAAAATGGAAGACCAAGAATACTCAAATGTTTaGCCAGATGTCACCCTGACTAGGGTCATGAAGTCATATCTAAGC +
Preference number: 1 (lower is better)
Translates to: LASVFKMEDQEYSNV*PDVTLTRVMKSYLS
Trigger: GCTTAGATATGACTTCATGACCCTAGTCAGGGTGACATCTGGGCAAACATTTGAGTATTCTTGGTCTTCCATTTTAAAGACAGAGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR TCA 90 bp TGTATCAGATATAGACTACTCATGCGCAAATGGCATCAATTTCAATaGTCCACTCCCAGGTTATTCTTGCTTAACTTTGTCAACTATGTT +
Preference number: 1 (lower is better)
Translates to: CIRYRLLMRKWHQFQ*STPRLFLLNFVNYV
Trigger: AACATAGTTGACAAAGTTAAGCAAGAATAACCTGGGAGTGGATCATTGAAATTGATGCCATTTGCGCATGAGTAGTCTATATCTGATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTCTTTAAAAGTGCTTaGATGCTGCAGGGCCAGAAC +
Preference number: 2 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLFKSA*MLQGQN
Trigger: GTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCGAATACTCAAATGTTTaGCCAGATGTCACCCTGACT +
Preference number: 2 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGEYSNV*PDVTLT
Trigger: AGTCAGGGTGACATCTGGGCAAACATTTGAGTATTC...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTTTCTTAAACCCAAATaGCTCCAATTCTGGAGTTTG +
Preference number: 2 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGFLKPK*LQFWSL
Trigger: CAAACTCCAGAATTGGAGGCATTTGGGTTTAAGAAA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGACTTTTAAGGGGCCTTaGTTTAGGAGTCTGGTATTA +
Preference number: 2 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSTFKGP*FRSLVL
Trigger: TAATACCAGACTCCTAAATCAAGGCCCCTTAAAAGT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTGCATTTAAAGAGTTaGAAGGTGCAGCTAATCCTA +
Preference number: 2 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLHLKS*KVQLIL
Trigger: TAGGATTAGCTGCACCTTTCAACTCTTTAAATGCAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTTAGAATTAACTTATTaGATGAGTTTGAGGCCACTG +
Preference number: 2 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGLELTY*MSLRPL
Trigger: CAGTGGCCTCAAACTCATGCAATAAGTTAATTCTAA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGGATCAGCTATTTTTGTaGACTCTGGCATTTGAGATA +
Preference number: 2 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSDQLFL*TLAFEI
Trigger: TATCTCAAATGCCAGAGTTCACAAAAATAGCTGATC...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTAAAGTGCTTGCATGCTaGAGGGCCAGAACTTGTCAT +
Preference number: 2 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSKVLAC*RARTCH
Trigger: ATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR TCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTGGCATCAATTTCAATaGTCCACTCCCAGGTTATTC +
Preference number: 2 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSWHQFQ*STPRLF
Trigger: GAATAACCTGGGAGTGGATCATTGAAATTGATGCCA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR TCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAATCCTACGCTAACATCTaGAAGAAATGTTTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKSYANI*KKCLKQ
Trigger: CTGCTTTAAACATTTCTTTCAGATGTTAGCGTAGGA...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCCATTCAATAACAAATaGAGCAGCCTTACTGAATGT +
Preference number: 2 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSPFNNK*SSLTEC
Trigger: ACATTCAGTAAGGCTGCTGCATTTGTTATTGAATGG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTATTACTGAATCAGTATaGACTGAAGATAGGCTACTT +
Preference number: 2 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSITESV*TEDRLL
Trigger: AAGTAGCCTATCTTCAGTCCATACTGATTCAGTAAT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCCCTGATGGCTCTTTCTaGGTCTTTTCTAGCAAAAGA +
Preference number: 3 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGPDGSF*VFSSKR
Trigger: TCTTTTGCTAGAAAAGACCAAGAAAGAGCCATCAGG...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGTATAGTGTAAAGGCTTaGATGTGGATACCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSYSVKA*MWIPGL
Trigger: CAGGCCAGGTATCCACATCAAAGCCTTTACACTATA...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCACTTATTGCATGAGTTaGAGGCCACTGAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGTYCMS*RPLKRK
Trigger: TTTTCTTTTCAGTGGCCTCAAACTCATGCAATAAGT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR GCA 72 bp GTATTACCTAAATGCTCTTTAAAAGTGCTTGCATGCTaGAGGGCCAGAACTTGTCATATACCACTCCGATTC +
Preference number: 3 (lower is better)
Translates to: VLPKCSLKVLAC*RARTCHIPLRF
Trigger: GAATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAGCATTTAGGTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR CCA 72 bp AAAGAGAACCACCACTATAGTGTAAAGGCTTTGATGTaGATACCTGGCCTGATGGCTCTTTCTTGGTCTTTT +
Preference number: 3 (lower is better)
Translates to: KENHHYSVKALM*IPGLMALSWSF
Trigger: AAAAGACCAAGAAAGAGCCATCAGGCCAGGTATCCACATCAAAGCCTTTACACTATAGTGGTGGTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTCCAATTCTGGAGTTaGAAGATCAGGTTTAATCTC +
Preference number: 3 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLQFWS*KIRFNL
Trigger: GAGATTAAACCTGATCTTCAAACTCCAGAATTGGAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR GCA 72 bp GTCTTTAAAATGGAAGACCAAGAATACTCAAATGTTTaGCCAGATGTCACCCTGACTAGGGTCATGAAGTCA +
Preference number: 3 (lower is better)
Translates to: VFKMEDQEYSNV*PDVTLTRVMKS
Trigger: TGACTTCATGACCCTAGTCAGGGTGACATCTGGGCAAACATTTGAGTATTCTTGGTCTTCCATTTTAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCTGCAGGGCCAGAACTaGTCATATACCACTCCGATT +
Preference number: 3 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSLQGQN*SYTTPI
Trigger: AATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAGTTAGACCAATGGCTTaGATAGTAAAACTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKVRPMA*IVKLVR
Trigger: CCTCACCAGTTTTACTATCAAAGCCATTGGTCTAAC...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR TCA 72 bp TATAGACTACTCATGCGCAAATGGCATCAATTTCAATaGTCCACTCCCAGGTTATTCTTGCTTAACTTTGTC +
Preference number: 3 (lower is better)
Translates to: YRLLMRKWHQFQ*STPRLFLLNFV
Trigger: GACAAAGTTAAGCAAGAATAACCTGGGAGTGGATCATTGAAATTGATGCCATTTGCGCATGAGTAGTCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACTTAGAATTAACTTATaGCATGAGTTTGAGGCCACT +
Preference number: 3 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKLRINL*HEFEAT
Trigger: AGTGGCCTCAAACTCATGCAATAAGTTAATTCTAAG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR GCA 72 bp AAAAGCTACTTATGTACCTGGTTTCTTAAACCCAAATaGCTCCAATTCTGGAGTTTGAAGATCAGGTTTAAT +
Preference number: 3 (lower is better)
Translates to: KSYLCTWFLKPK*LQFWSLKIRFN
Trigger: ATTAAACCTGATCTTCAAACTCCAGAATTGGAGGCATTTGGGTTTAAGAAACCAGGTACATAAGTAGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR TCA 72 bp CAGTATGGACTGAAGATAGGCTACTTTGATAGCAAATaGGGACTCCAGTTATTTCAACTTTCTAAAAATGTT +
Preference number: 3 (lower is better)
Translates to: QYGLKIGYFDSK*GLQLFQLSKNV
Trigger: AACATTTTTAGAAAGTTGAAATAACTGGAGTCCTCATTTGCTATCAAAGTAGCCTATCTTCAGTCCATACTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGTCCTTCCACGTCCCCTaGCATGAATCACCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSSFHVP*HESPRG
Trigger: CCCCCGAGGTGATTCATGGCAGGGGACGTGGAAGGA...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTGGCGGGGCACGAGAGTaGTCGCCTGCAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSGGARE*SPAAPS
Trigger: AGAGGGGGCTGCAGGCGAGCACTCTCGTGCCCCGCC...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTGGGTGGCCAAGAGTaGTTTATGGGCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLGGQE*FMGLEL
Trigger: CAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCCTATGGTCCCTTCTTTaGTGGGGTCAAACACGCACA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGLWSLL*WGQTRT
Trigger: TGTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAG...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAGAAAGTCTCATCTCTaGTTCTGCCTGCTACGGCGT +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGRKSHL*FCLLRR
Trigger: ACGCCGTAGCAGGCAGAACCAGAGATGAGACTTTCT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTGGTCCGTTGTTCTATaGTCCCTTCTTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGWSVVL*SLLCWG
Trigger: ACCCCAGCAAAGAAGGGACCATAGAACAACGGACCA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCAGCGTCTTCTATCATaGCGCAGCCAAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSQRLLS*RSQDCT
Trigger: TGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCAGTTGGTAACCACTTaGGTTCTCCTGGTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSQLVTT*VLLVRC
Trigger: ACAACGGACCAGGAGAACTCAAGTGGTTACCAACTG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAAGGGAGAACAAAGCTaGTGGCATTCTCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGKGEQS*WHSPQC
Trigger: ACATTGAGGAGAATGCCATCAGCTTTGTTCTCCCTT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCGTTTTGCAGAACGGATaGGGCTTGACTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGVLQNG*GLTSYP
Trigger: TGGATATGAAGTCAAGCCGCATCCGTTCTGCAAAAC...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCCTATCTCTGGGAACCTaGTCAGATGATCATTATCCA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGLSLGT*SDDHYP
Trigger: TGGATAATGATCATCTGAGCAGGTTCCCAGAGATAG...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCATCTCTGGTTCTGCCTaGTACGGCGTAAATAAACTT +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGISGSA*YGVNKL
Trigger: AAGTTTATTTACGCCGTAGCAGGCAGAACCAGAGAT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAGAGGCTTCTGTTCTTaGTTCAAGCAAGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGRGFCS*FKQELK
Trigger: TTTCAACTCTTGCTTGAATCAAGAACAGAAGCCTCT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTTGGAGGTGGAAGATaGGGTGATTCCACCGGTGAT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLGGGR*GDSTGD
Trigger: ATCACCGGTGGAATCACCTCATCTTCCACCTCCAAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGATTAGTTGCAACGCCTaGCCTCATCCAGTACATAGT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSISCNA*PHPVHS
Trigger: ACTATGTACTGGATGAGGTCAGGCGTTGCAACTAAT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCACTTTTAAGGGGCCTTaGTTTAGGAGTCTGGTATTA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGTFKGP*FRSLVL
Trigger: TAATACCAGACTCCTAAATCAAGGCCCCTTAAAAGT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTACGAGAGTGCTCGCCTaGAGCCCCCTCTGGATAAGT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSTRVLA*SPLWIS
Trigger: ACTTATCCAGAGGGGGCTGCAGGCGAGCACTCTCGT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTGCCGCAGCCAAGACTaGACAGCCTCGTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSCRSQD*TASYSS
Trigger: AGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTCTATAGACAAAGTATaGCCAAGAGGTATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSIDKV*PRGIGH
Trigger: ATGCCCTATACCTCTTGGGCATACTTTGTCTATAGA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR CAA 72 bp CTCTTTAAAAGTGCTTGCATGCTGCAGGGCCAGAACTaGTCATATACCACTCCGATTCTCACTAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LFKSACMLQGQN*SYTTPILTKNR
Trigger: CCTGTTTTTAGTGAGAATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTGTCTAACTTCTCCCTaGCTCCCTCGATGTTTACGC +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKCLTSP*LPRCLR
Trigger: GCGTAAACATCGAGGGAGTCAGGGAGAAGTTAGACA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTCCTACGCTAACATCTaGAAGAAATGTTTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSYANI*KKCLKQ
Trigger: CTGCTTTAAACATTTCTTTCAGATGTTAGCGTAGGA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCGATCAGCTATTTTTGTaGACTCTGGCATTTGAGATA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGDQLFL*TLAFEI
Trigger: TATCTCAAATGCCAGAGTTCACAAAAATAGCTGATC...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGAGCTAGTCTCCTCTaGGAGATAGCTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSRASLL*EIAYKL
Trigger: CAGTTTATAAGCTATCTCTCAGAGGAGACTAGCTCT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTCGTTCCCTCATGTCTaGAGTAAACATAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSFPHV*SKHNSE
Trigger: TTCAGAATTATGTTTACTGCAGACATGAGGGAACGA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTACCCAGCAGAGACACTaGTGTCGTGGATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSTQQRH*CRGWRN
Trigger: GTTCCTCCATCCACGACACCAGTGTCTCTGCTGGGT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGACTTTGGAAGAAGCATaGAATTCACCATCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKTLEEA*NSPSGP
Trigger: GGGCCCGGATGGTGAATTCCATGCTTCTTCCAAAGT...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAAATTCAGAGCGTaGTACAGACATATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSSKFRA*YRHICH
Trigger: ATGGCAGATATGTCTGTACCACGCTCTGAATTTGCT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTGGTCCCTTCTTTGCTaGGGTCAAACACGCACACTT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKWSLLC*GQTRTL
Trigger: AAGTGTGCGTGTTTGACCCCAGCAAAGAAGGGACCA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAGCTACTTATGTACCTaGTTTCTTAAACCCAAATGC +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSYLCT*FLKPKC
Trigger: GCATTTGGGTTTAAGAAACCAGGTACATAAGTAGCT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCGGATTATTTGACTACTaGCCCAAAATGTACCTAAAG +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGGLFDY*PKMYLK
Trigger: CTTTAGGTACATTTTGGGCCAGTAGTCAAATAATCC...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCAAAACCGGATATTCTaGATGATGGTATCGGTATGT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSQNRIF*MMVSVC
Trigger: ACATACCGATACCATCATTCAGAATATCCGGTTTTG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTGTGTGTCCTTTACTATaGCTCGAGCAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSVCPLL*LEQASQ
Trigger: CTGGGAAGCCTGCTCGAGTCATAGTAAAGGACACAC...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTGGTACAGACATATCTaGCATCTGCAGCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKWYRHI*HLQPGV
Trigger: AACTCCTGGCTGCAGATGGCAGATATGTCTGTACCA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACACTGGTGTCGTGGATaGAGGAACAGAATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKHWCRG*RNRILP
Trigger: TGGAAGGATTCTGTTCCTCCATCCACGACACCAGTG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAGAGACACTGGTGTCGTaGATGGAGGAACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKETLVS*MEEQNP
Trigger: AGGATTCTGTTCCTCCATCCACGACACCAGTGTCTC...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGAGTAATCACTCTGGGTaGCCAAGAGTGCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKSNHSG*PRVLYG
Trigger: CCCATAAAGCACTCTTGGCCACCCAGAGTGATTACT...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTCAAAAACGCTGGTTaGGGTCATCAAGCAAAACCG +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLKNAG*GHQAKP
Trigger: CGGTTTTGCTTGATGACCCCAACCAGCGTTTTTGAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACCACTTGAGTTCTCCTaGTCCGTTGTTCTATGGTCC +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKPLEFS*SVVLWS
Trigger: GGACCATAGAACAACGGACCAGGAGAACTCAAGTGG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCATTATATCCACGGCTTaGGAAAAATTACCTGACAAA +
Preference number: 4 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGIISTA*EKLPDK
Trigger: TTTGTCAGGTAATTTTTCCCAAGCCGTGGATATAAT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGACCGGATATTCTGAATaGTGGTATCGGTATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKTGYSE*WYRYVS
Trigger: GGAGACATACCGATACCATCATTCAGAATATCCGGT...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAAGAACGGATGCGGCTTaGCTTCATATCCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKRTDAA*LHIQQR
Trigger: CCTTTGTTGGATATGAAGTCAAGCCGCATCCGTTCT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGGTCATATCTCTCAGTTaGATAGAAAGTCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSVISLS*IESLIS
Trigger: AGAGATGAGACTTTCTATTCAACTGAGAGATATGAC...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGATTCTTGATCCATTCTaGACTTTGTGGTTACTATCC +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSILDPF*TLWLLS
Trigger: GGATAGTAACCACAAAGTTCAGAATGGATCAAGAAT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGACAAAACATGAACTTTaGTCTTGGCCTCTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSTKHEL*SWPLSL
Trigger: TAAAGACAGAGGCCAAGATCAAAGTTCATGTTTTGT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTTAAAGCTCAAAACTaGTTACAGCTAACATCAGGT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLKAQN*LQLTSG
Trigger: ACCTGATGTTAGCTGTAATCAGTTTTGAGCTTTAAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGTTATACGGTGTACTaGAAGGATATGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSSYTVY*KDMISM
Trigger: CATGGAAATCATATCCTTTCAGTACACCGTATAACT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGGGCCCTAGGATTATTTaGCTACTGGCCCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKGPRII*LLAQNV
Trigger: TACATTTTGGGCCAGTAGTCAAATAATCCTAGGGCC...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAAAAGTGCTTGCATGCTaGAGGGCCAGAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKKVLAC*RARTCH
Trigger: ATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAGTACAGCTCTATCTCTaGGAACCTGCTCAGATGATC +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKVQLYL*EPAQMI
Trigger: GATCATCTGAGCAGGTTCCCAGAGATAGAGCTGTAC...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTGGCATCAATTTCAATaGTCCACTCCCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKWHQFQ*STPRLF
Trigger: GAATAACCTGGGAGTGGATCATTGAAATTGATGCCA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCTCTTTAAAAGTGCTTaGATGCTGCAGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSLFKSA*MLQGQN
Trigger: GTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCCATATAGAAGGCATTaGAATATTGCACCAATATTC +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSPYRRH*NIAPIF
Trigger: GAATATTGGTGCAATATTGCAATGCCTTCTATATGG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGGAATACTCAAATGTTTaGCCAGATGTCACCCTGACT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKEYSNV*PDVTLT
Trigger: AGTCAGGGTGACATCTGGGCAAACATTTGAGTATTC...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACCTTCTCAAAAACGCTaGTTGGGGTCATCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKPSQKR*LGSSSK
Trigger: TTTGCTTGATGACCCCAACCAGCGTTTTTGAGAAGG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGATTACTGAATCAGTATaGACTGAAGATAGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSITESV*TEDRLL
Trigger: AAGTAGCCTATCTTCAGTCCATACTGATTCAGTAAT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTGTAAAGGCTTTGATGTaGATACCTGGCCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSVKALM*IPGLMA
Trigger: AGCCATCAGGCCAGGTATCCACATCAAAGCCTTTAC...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTCCCAATCACCTCACTaGACCATTCCTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSSQSPH*TIPSES
Trigger: GCTTTCTGAAGGAATGGTCCAGTGAGGTGATTGGGA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTGTCTCGGGTCATACCTaGATACTTTGGAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSVSGHT*ILWKKH
Trigger: ATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGAC...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCATCCGGATCAAAAGTaGGGATGGAATCGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSHPDQK*GWNRCN
Trigger: ATTACAGCGATTCCATCCTCACTTTTGATCCGGATG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTGCATTTAAAGAGTTaGAAGGTGCAGCTAATCCTA +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLHLKS*KVQLIL
Trigger: TAGGATTAGCTGCACCTTTCAACTCTTTAAATGCAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACGAAATACTGTAGTTTaGGGTTTTGCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKRNTVV*GFAERM
Trigger: CATCCGTTCTGCAAAACCGCAAACTACAGTATTTCG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACCGGAAAATGCAGGTTaGATACTTGTAAACCATCCA +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKPENAG*ILVNHP
Trigger: TGGATGGTTTACAAGTATGCAACCTGCATTTTCCGG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAATAAATTGCAGGACATaGCTGAAACCGGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKINCRT*LKPVAV
Trigger: AACAGCTACCGGTTTCAGCCATGTCCTGCAATTTAT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTTTGATGTGGATACCTaGCCTGATGGCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSFDVDT*PDGSFL
Trigger: CAAGAAAGAGCCATCAGGCCAGGTATCCACATCAAA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTCCAATTCTGGAGTTTaGAGATCAGGTTTAATCTCA +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKSNSGV*RSGLIS
Trigger: TGAGATTAAACCTGATCTTCAAACTCCAGAATTGGA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTGAAAGTAATTCAATaGTTGGTCAACTTCGTAACG +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLKVIQ*LVNFVT
Trigger: CGTTACGAAGTTGACCAAGCATTGAATTACTTTCAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCCATTCAATAACAAATaGAGCAGCCTTACTGAATGT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKPFNNK*SSLTEC
Trigger: ACATTCAGTAAGGCTGCTGCATTTGTTATTGAATGG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
3UTR CAA 72 bp TTATACATCAGCAGCCATATAGAAGGCATTGCAATATaGCACCAATATTCTAAGATCTGGCAAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LYISSHIEGIAI*HQYSKIWQVLP
Trigger: TGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTGCAATGCCTTCTATATGGCTGCTGATGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR TCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTATCCAAGTAAGACATaGGCTTCTCAAAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSYPSKT*ASQSSD
Trigger: ATCTGAGCTTTGAGAAGCTCATGTCTTACTTGGATA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTGGTATTACCTAAATaGTCTTTAAAAGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLVLPK*SLKVLA
Trigger: TGCAAGCACTTTTAAAGAGCATTTAGGTAATACCAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAAATATCCCAGATAAGTaGAGCATTCTATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKNIPDK*SILFNC
Trigger: GCAGTTGAATAGAATGCTCCACTTATCTGGGATATT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCTTGATTTAGGAGTCTaGTATTACCTAAATGCTCTT +
Preference number: 4 (lower is better)
Translates to: ISQISGAFYSTASGSSFKLDLGV*YYLNAL
Trigger: AAGAGCATTTAGGTAATACCAGACTCCTAAATCAAG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAAAATGCCTCCAATTCTaGAGTTTGAAGATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKKCLQF*SLKIRF
Trigger: AAACCTGATCTTCAAACTCCAGAATTGGAGGCATTT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAACGAAGACATAAAGCTTaGCATTGTAAGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKRRHKA*HCKKSS
Trigger: AGATGATTTCTTACAATGGCAAGCTTTATGTCTTCG...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCTCCCAGGTTATTCTTaGTTAACTTTGTCAACTATG +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSLPGYS*LTLSTM
Trigger: CATAGTTGACAAAGTTAAGCAAGAATAACCTGGGAG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTTTCTTAAACCCAAATaGCTCCAATTCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSFLKPK*LQFWSL
Trigger: CAAACTCCAGAATTGGAGGCATTTGGGTTTAAGAAA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR GCA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTTAGAATTAACTTATTaGATGAGTTTGAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSLELTY*MSLRPL
Trigger: CAGTGGCCTCAAACTCATGCAATAAGTTAATTCTAA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp GACGGCAGTCTGCATCAGGAAGAACCGGGCCAGCGGGCCGATGGGTaGGCGGTCGGGCGCCGGGACGGCACTCGGCAGGCTCCTCGGACG +
Preference number: 5 (lower is better)
Translates to: DGSLHQEEPGQRADG*AVGRRDGTRQAPRT
Trigger: CGTCCGAGGAGCCTGCCGAGTGCCGTCCCGGCGCCCGACCGCCCACCCATCGGCCCGCTGGCCCGGTTCTTCCTGATGCAGACTGCCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp AGTGGACGGCAGTCTGCATCAGGAAGAACCGGGCCAGCGGGCCGATaGGTGGGCGGTCGGGCGCCGGGACGGCACTCGGCAGGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SGRQSASGRTGPAGR*VGGRAPGRHSAGSS
Trigger: CGAGGAGCCTGCCGAGTGCCGTCCCGGCGCCCGACCGCCCACCCATCGGCCCGCTGGCCCGGTTCTTCCTGATGCAGACTGCCGTCCACT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp CCCTCCTCATACAGTGCTCTGAACCCAGCAGAGACACTGGTGTCGTaGATGGAGGAACAGAATCCTTCCACGTCCCCTGCCATGAATCAC +
Preference number: 5 (lower is better)
Translates to: PSSYSALNPAETLVS*MEEQNPSTSPAMNH
Trigger: GTGATTCATGGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCCACGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTATGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp CAGGAGTTCTGTCTCGGGTCATACCTGAATACTTTGGAAGAAGCATaGAATTCACCATCCGGGCCCAGCTCTTCCCCGCCTAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: QEFCLGSYLNTLEEA*NSPSGPSSSPPNRN
Trigger: GTTCCTGTTAGGCGGGGAAGAGCTGGGCCCGGATGGTGAATTCCATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGACAGAACTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 90 bp ACATATCTGCCATCTGCAGCCAGGAGTTCTGTCTCGGGTCATACCTaGATACTTTGGAAGAAGCATGGAATTCACCATCCGGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TYLPSAARSSVSGHT*ILWKKHGIHHPGPA
Trigger: AGCTGGGCCCGGATGGTGAATTCCATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGACAGAACTCCTGGCTGCAGATGGCAGATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAACACGCACACTTGCTaGGAGGTGGAAGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGNTHTC*EVEDEV
Trigger: CACCTCATCTTCCACCTCCAAGCAAGTGTGCGTGTT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTCTATGGTCCCTTCTTaGCTGGGGTCAAACACGCAC +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSMVPS*LGSNTH
Trigger: GTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAGA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 90 bp CCCAATAACACCTACAGCAAATTCAGAGCGTGGTACAGACATATCTaGCATCTGCAGCCAGGAGTTCTGTCTCGGGTCATACCTGAATAC +
Preference number: 5 (lower is better)
Translates to: PNNTYSKFRAWYRHI*HLQPGVLSRVIPEY
Trigger: GTATTCAGGTATGACCCGAGACAGAACTCCTGGCTGCAGATGGCAGATATGTCTGTACCACGCTCTGAATTTGCTGTAGGTGTTATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 90 bp CGTTGTTCTATGGTCCCTTCTTTGCTGGGGTCAAACACGCACACTTaGTTGGAGGTGGAAGATGAGGTGATTCCACCGGTGATAAACAAT +
Preference number: 5 (lower is better)
Translates to: RCSMVPSLLGSNTHT*LEVEDEVIPPVINN
Trigger: ATTGTTTATCACCGGTGGAATCACCTCATCTTCCACCTCCAAGCAAGTGTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAGAACAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp ATCATGCCGCAGCCAAGACTGCACAGCCTCGTACAGCTCTATCTCTaGGAACCTGCTCAGATGATCATTATCCAAGTAAGACATGAGCTT +
Preference number: 5 (lower is better)
Translates to: IMPQPRLHSLVQLYL*EPAQMIIIQVRHEL
Trigger: AAGCTCATGTCTTACTTGGATAATGATCATCTGAGCAGGTTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 90 bp ACACCTACAGCAAATTCAGAGCGTGGTACAGACATATCTGCCATCTaGAGCCAGGAGTTCTGTCTCGGGTCATACCTGAATACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TPTANSERGTDISAI*SQEFCLGSYLNTLE
Trigger: TTCCAAAGTATTCAGGTATGACCCGAGACAGAACTCCTGGCTGCAGATGGCAGATATGTCTGTACCACGCTCTGAATTTGCTGTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp GGCGTAAATAAACTTCCCAATAACACCTACAGCAAATTCAGAGCGTaGTACAGACATATCTGCCATCTGCAGCCAGGAGTTCTGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GVNKLPNNTYSKFRA*YRHICHLQPGVLSR
Trigger: CCGAGACAGAACTCCTGGCTGCAGATGGCAGATATGTCTGTACCACGCTCTGAATTTGCTGTAGGTGTTATTGGGAAGTTTATTTACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCAGTTCTCCTGGTCCGTaGTTCTATGGTCCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSSPGP*FYGPFF
Trigger: AAAGAAGGGACCATAGAACAACGGACCAGGAGAACT...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTCCGGAAAATGCAGGTaGCATACTTGTAAACCATCC +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGSGKCR*HTCKPS
Trigger: GGATGGTTTACAAGTATGCAACCTGCATTTTCCGGA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGCTGCAGGGCCAGAACTaGTCATATACCACTCCGATT +
Preference number: 5 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSLQGQN*SYTTPI
Trigger: AATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAG...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCTATAGTGTAAAGGCTTaGATGTGGATACCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGYSVKA*MWIPGL
Trigger: CAGGCCAGGTATCCACATCAAAGCCTTTACACTATA...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 90 bp TTCTTTGCTGGGGTCAAACACGCACACTTGCTTGGAGGTGGAAGATaGGGTGATTCCACCGGTGATAAACAATTTGTTATTGAGCACTGT +
Preference number: 5 (lower is better)
Translates to: FFAGVKHAHLLGGGR*GDSTGDKQFVIEHC
Trigger: ACAGTGCTCAATAACAAATTGTTTATCACCGGTGGAATCACCTCATCTTCCACCTCCAAGCAAGTGTGCGTGTTTGACCCCAGCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCGTTAGACCAATGGCTTaGATAGTAAAACTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGVRPMA*IVKLVR
Trigger: CCTCACCAGTTTTACTATCAAAGCCATTGGTCTAAC...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 90 bp TCCTCGAAATACTGTAGTTTGCGGTTTTGCAGAACGGATGCGGCTTaGCTTCATATCCAACAAAGGCTGCTGGTGAACATTCTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: SSKYCSLRFCRTDAA*LHIQQRLLVNILKV
Trigger: TACTTTCAGAATGTTCACCAGCAGCCTTTGTTGGATATGAAGTCAAGCCGCATCCGTTCTGCAAAACCGCAAACTACAGTATTTCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCCTCCAATTCTGGAGTTaGAAGATCAGGTTTAATCTC +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGLQFWS*KIRFNL
Trigger: GAGATTAAACCTGATCTTCAAACTCCAGAATTGGAG...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 90 bp TGCAGTAAACATAATTCTGAAGTAATCACTCTGGGTGGCCAAGAGTaGTTTATGGGCCTGGAACTGATGATCTTCAATAACCAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: CSKHNSEVITLGGQE*FMGLELMIFNNQSD
Trigger: GTCACTCTGGTTATTGAAGATCATCAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAGAGTGATTACTTCAGAATTATGTTTACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGAACCATTATTTGTTaGTCCAGCACAGTCACACCA +
Preference number: 5 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSRTIIC*SSTVTP
Trigger: TGGTGTGACTGTGCTGGACAAACAAATAATGGTTCT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGTCCAAGAACCATTATTaGTTTGTCCAGCACAGTCAC +
Preference number: 5 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSSKNHY*FVQHSH
Trigger: GTGACTGTGCTGGACAAACAAATAATGGTTCTTGGA...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp TTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGAGCAGGCCTTAGAATTAACTTATaGCATGAGTTTGAGGCCACT +
Preference number: 5 (lower is better)
Translates to: FTTSPHIKRVSFTMTRAGLRINL*HEFEAT
Trigger: AGTGGCCTCAAACTCATGCAATAAGTTAATTCTAAG...GCCTGCTCGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 90 bp CTGTTAACCATGCTATGTCCAATCATTCCTCGAAATACTGTAGTTTaGGGTTTTGCAGAACGGATGCGGCTTGACTTCATATCCAACAAA +
Preference number: 5 (lower is better)
Translates to: LLTMLCPIIPRNTVV*GFAERMRLDFISNK
Trigger: TTTGTTGGATATGAAGTCAAGCCGCATCCGTTCTGCAAAACCGCAAACTACAGTATTTCGAGGAATGATTGGACATAGCATGGTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCAGAACGGATGCGGCTaGACTTCATATCCAACAAAG +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKQNGCG*TSYPTK
Trigger: CTTTGTTGGATATGAAGTCAAGCCGCATCCGTTCTG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 90 bp ATCCACAAATTCCCATTTATCGTTGGTGATGTCATATCTCTCAGTTaGATAGAAAGTCTCATCTCTGGTTCTGCCTGCTACGGCGTAAAT +
Preference number: 5 (lower is better)
Translates to: IHKFPFIVGDVISLS*IESLISGSACYGVN
Trigger: ATTTACGCCGTAGCAGGCAGAACCAGAGATGAGACTTTCTATTCAACTGAGAGATATGACATCACCAACGATAAATGGGAATTTGTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCACCACTTCTATAAGTaGAACATACATGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKHHFYK*NIHGSL
Trigger: CAGGCTGCCATGTATGTTCAACTTATAGAAGTGGTG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGATAAACAATTTGTTATaGAGCACTGTCCCCTCATGT +
Preference number: 5 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSINNLL*STVPSC
Trigger: ACATGAGGGGACAGTGCTCAATAACAAATTGTTTAT...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTACAGTTGGTAACCACTaGAGTTCTCCTGGTCCGTTG +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSTVGNH*SSPGPL
Trigger: CAACGGACCAGGAGAACTCAAGTGGTTACCAACTGT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CTCCATTTTTACCACTTCTCCCCACATAAAGCGTGTGTCCTTTACTATGACTCGGAAGGCATTGCAATATaGCACCAATATTCTAAGATC +
Preference number: 5 (lower is better)
Translates to: LHFYHFSPHKACVLYYDSEGIAI*HQYSKI
Trigger: GATCTTAGAATATTGGTGCAATATTGCAATGCCTTC...CGAGTCATAGTAAAGGACACACGCTTTATGTGGGGAGAAGTGGTAAAAATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGGAGAGGCTTCTGTTCTaGATTCAAGCAAGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKERLLF*IQARVE
Trigger: TTCAACTCTTGCTTGAATCAAGAACAGAAGCCTCTC...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGTCCATAGTACATAAATaGCAGGACATGGCTGAAACC +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKSIVHK*QDMAET
Trigger: GGTTTCAGCCATGTCCTGCAATTTATGTACTATGGA...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAATGAGTGGCACAAAGTaGTCTAGCAGAAAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKMSGTK*SSRKVS
Trigger: AGACACCTTTCTGCTAGACAACTTTGTGCCACTCAT...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAAGCTCCCACCAGACTCTaGGTTTCTTTAAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKAPTRL*VSLREV
Trigger: TACTTCTCTTAAAGAAACCAAGAGTCTGGTGGGAGC...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGCCTGATGGCTCTTTCTaGGTCTTTTCTAGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKPDGSF*VFSSKR
Trigger: TCTTTTGCTAGAAAAGACCAAGAAAGAGCCATCAGG...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTCCGGTGATAAACAATTaGTTATTGAGCACTGTCCCC +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSPVINN*LLSTVP
Trigger: GGGGACAGTGCTCAATAACAAATTGTTTATCACCGG...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 90 bp CAATTTGTTATTGAGCACTGTCCCCTCATGTCCATATTTGTTAACTaGATAAGGATCCACAAATTCCCATTTATCGTTGGTGATGTCATA +
Preference number: 5 (lower is better)
Translates to: QFVIEHCPLMSIFVN*IRIHKFPFIVGDVI
Trigger: TATGACATCACCAACGATAAATGGGAATTTGTGGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTTCGAAATACTGTAGTTaGCGGTTTTGCAGAACGGAT +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSSKYCS*RFCRTD
Trigger: ATCCGTTCTGCAAAACCGCAAACTACAGTATTTCGA...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp ATATCCCAGATAAGTGGAGCATTCTATTCAACTGCTTCTGGAAGTAGTTTCAAGAATTCCCATTTATCGTaGGTGATGTCATATCTCTCA +
Preference number: 5 (lower is better)
Translates to: ISQISGAFYSTASGSSFKNSHLS*VMSYLS
Trigger: TGAGAGATATGACATCACCAACGATAAATGGGAATT...CTTGAAACTACTTCCAGAAGCAGTTGAATAGAATGCTCCACTTATCTGGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAATCATCTTCCTTCCACTaGTTTTCATCCGGATCAAAA +
Preference number: 5 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKSSSFH*FSSGSK
Trigger: TTTTGATCCGGATGAAAACAAGTGGAAGGAAGATGA...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp AAAATTCAACAAGTATGGCGAACTGTGTGTGCAAGTAAGTGCACTAGCTTAAAATCTGCATTTAAAGAGTaGAAAGGTGCAGCTAATCCT +
Preference number: 5 (lower is better)
Translates to: KIQQVWRTVCASKCTSLKSAFKE*KGAANP
Trigger: AGGATTAGCTGCACCTTTCAACTCTTTAAATGCAGA...TTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTAAAGTAATTCAATGCTaGGTCAACTTCGTAACGGAG +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSKVIQC*VNFVTE
Trigger: CTCCGTTACGAAGTTGACCAAGCATTGAATTACTTT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTAGGAACACAAAATTATaGACGATAGCAAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSRNTKL*TIARQS
Trigger: TGACTGCCTTGCTATCGTCAATAATTTTGTGTTCCT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS-3UTR CAA 90 bp CAATATTGCACCAATATTCTAAGATCTGGCAAGTTTTGCCAGTATAGATCTAGTAGTCCCACTGAACGTTaGACATGTTTAGATTATGCA +
Preference number: 5 (lower is better)
Translates to: QYCTNILRSGKFCQYRSSSPTER*TCLDYA
Trigger: TGCATAATCTAAACATGTCAAACGTTCAGTGGGACT...ACTAGATCTATACTGGCAAAACTTGCCAGATCTTAGAATATTGGTGCAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp CAGTCTGCATCAGGAAGAACCGGGCCAGCGGGCCGATaGGTGGGCGGTCGGGCGCCGGGACGGCACTCGGCA +
Preference number: 6 (lower is better)
Translates to: QSASGRTGPAGR*VGGRAPGRHSA
Trigger: TGCCGAGTGCCGTCCCGGCGCCCGACCGCCCACCCATCGGCCCGCTGGCCCGGTTCTTCCTGATGCAGACTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp TACAGTGCTCTGAACCCAGCAGAGACACTGGTGTCGTaGATGGAGGAACAGAATCCTTCCACGTCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: YSALNPAETLVS*MEEQNPSTSPA
Trigger: GGCAGGGGACGTGGAAGGATTCTGTTCCTCCATCCACGACACCAGTGTCTCTGCTGGGTTCAGAGCACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 90 bp CCATCCGGGCCCAGCTCTTCCCCGCCTAACAGGAACACAAAATTATaGACGATAGCAAGGCAGTCAGGTCGCAGAGGTACTTGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PSGPSSSPPNRNTKL*TIARQSGRRGTCGP
Trigger: AGGCCCACAAGTACCTCTGCGACCTGACTGCCTTGCTATCGTCAATAATTTTGTGTTCCTGTTAGGCGGGGAAGAGCTGGGCCCGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 90 bp GCCATCTGCAGCCAGGAGTTCTGTCTCGGGTCATACCTGAATACTTaGGAAGAAGCATGGAATTCACCATCCGGGCCCAGCTCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: AICSQEFCLGSYLNT*EEAWNSPSGPSSSP
Trigger: CGGGGAAGAGCTGGGCCCGGATGGTGAATTCCATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGACAGAACTCCTGGCTGCAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp TGTCTCCAGCGTCTTCTATCATGCCGCAGCCAAGACTaGACAGCCTCGTACAGCTCTATCTCTGGGAACCTG +
Preference number: 6 (lower is better)
Translates to: CLQRLLSCRSQD*TASYSSISGNL
Trigger: CAGGTTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp GAGTTCTCCTGGTCCGTTGTTCTATGGTCCCTTCTTTaGTGGGGTCAAACACGCACACTTGCTTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: EFSWSVVLWSLL*WGQTRTLAWRW
Trigger: CCACCTCCAAGCAAGTGTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAGAACAACGGACCAGGAGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp TGTCTCGGGTCATACCTGAATACTTTGGAAGAAGCATaGAATTCACCATCCGGGCCCAGCTCTTCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: CLGSYLNTLEEA*NSPSGPSSSPP
Trigger: AGGCGGGGAAGAGCTGGGCCCGGATGGTGAATTCCATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp ATGATGGTATCGGTATGTCTCCAGCGTCTTCTATCATaGCGCAGCCAAGACTGCACAGCCTCGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: MMVSVCLQRLLS*RSQDCTASYSS
Trigger: AGAGCTGTACGAGGCTGTGCAGTCTTGGCTGCGGCATGATAGAAGACGCTGGAGACATACCGATACCATCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp TTCTCCTGGTCCGTTGTTCTATGGTCCCTTCTTTGCTaGGGTCAAACACGCACACTTGCTTGGAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: FSWSVVLWSLLC*GQTRTLAWRWK
Trigger: CTTCCACCTCCAAGCAAGTGTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAGAACAACGGACCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 72 bp CCCAGCTCTTCCCCGCCTAACAGGAACACAAAATTATaGACGATAGCAAGGCAGTCAGGTCGCAGAGGTACT +
Preference number: 6 (lower is better)
Translates to: PSSSPPNRNTKL*TIARQSGRRGT
Trigger: AGTACCTCTGCGACCTGACTGCCTTGCTATCGTCAATAATTTTGTGTTCCTGTTAGGCGGGGAAGAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp CCATCTGCAGCCAGGAGTTCTGTCTCGGGTCATACCTaGATACTTTGGAAGAAGCATGGAATTCACCATCCG +
Preference number: 6 (lower is better)
Translates to: PSAARSSVSGHT*ILWKKHGIHHP
Trigger: CGGATGGTGAATTCCATGCTTCTTCCAAAGTATTCAGGTATGACCCGAGACAGAACTCCTGGCTGCAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp ACCTACAGCAAATTCAGAGCGTGGTACAGACATATCTaGCATCTGCAGCCAGGAGTTCTGTCTCGGGTCATA +
Preference number: 6 (lower is better)
Translates to: TYSKFRAWYRHI*HLQPGVLSRVI
Trigger: TATGACCCGAGACAGAACTCCTGGCTGCAGATGGCAGATATGTCTGTACCACGCTCTGAATTTGCTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 72 bp CCAACAGTTGGTAACCACTTGAGTTCTCCTGGTCCGTaGTTCTATGGTCCCTTCTTTGCTGGGGTCAAACAC +
Preference number: 6 (lower is better)
Translates to: PTVGNHLSSPGP*FYGPFFAGVKH
Trigger: GTGTTTGACCCCAGCAAAGAAGGGACCATAGAACAACGGACCAGGAGAACTCAAGTGGTTACCAACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 90 bp CTTATTCTCCCAACAGTTGGTAACCACTTGAGTTCTCCTGGTCCGTaGTTCTATGGTCCCTTCTTTGCTGGGGTCAAACACGCACACTTG +
Preference number: 6 (lower is better)
Translates to: LILPTVGNHLSSPGP*FYGPFFAGVKHAHL
Trigger: CAAGTGTGCGTGTTTGACCCCAGCAAAGAAGGGACCATAGAACAACGGACCAGGAGAACTCAAGTGGTTACCAACTGTTGGGAGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp CAGCCAAGACTGCACAGCCTCGTACAGCTCTATCTCTaGGAACCTGCTCAGATGATCATTATCCAAGTAAGA +
Preference number: 6 (lower is better)
Translates to: QPRLHSLVQLYL*EPAQMIIIQVR
Trigger: TCTTACTTGGATAATGATCATCTGAGCAGGTTCCCAGAGATAGAGCTGTACGAGGCTGTGCAGTCTTGGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 90 bp CGCGTAATTCATCTTGCTCTTATTCTCCCAACAGTTGGTAACCACTaGAGTTCTCCTGGTCCGTTGTTCTATGGTCCCTTCTTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RVIHLALILPTVGNH*SSPGPLFYGPFFAG
Trigger: CCCAGCAAAGAAGGGACCATAGAACAACGGACCAGGAGAACTCAAGTGGTTACCAACTGTTGGGAGAATAAGAGCAAGATGAATTACGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp ACGCTGGTTGGGGTCATCAAGCAAAACCGGATATTCTaGATGATGGTATCGGTATGTCTCCAGCGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: TLVGVIKQNRIF*MMVSVCLQRLL
Trigger: TAGAAGACGCTGGAGACATACCGATACCATCATTCAGAATATCCGGTTTTGCTTGATGACCCCAACCAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 72 bp GACAGAAAGTCAGGCCTAGACATGAGTGGCACAAAGTaGTCTAGCAGAAAGGTGTCTAACTTCTCCCTGACT +
Preference number: 6 (lower is better)
Translates to: DRKSGLDMSGTK*SSRKVSNFSLT
Trigger: AGTCAGGGAGAAGTTAGACACCTTTCTGCTAGACAACTTTGTGCCACTCATGTCTAGGCCTGACTTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 72 bp CATCTTGCTCTTATTCTCCCAACAGTTGGTAACCACTaGAGTTCTCCTGGTCCGTTGTTCTATGGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: HLALILPTVGNH*SSPGPLFYGPF
Trigger: GAAGGGACCATAGAACAACGGACCAGGAGAACTCAAGTGGTTACCAACTGTTGGGAGAATAAGAGCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp ATCTTGCTCTTATTCTCCCAACAGTTGGTAACCACTTaGGTTCTCCTGGTCCGTTGTTCTATGGTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: ILLLFSQQLVTT*VLLVRCSMVPS
Trigger: AGAAGGGACCATAGAACAACGGACCAGGAGAACTCAAGTGGTTACCAACTGTTGGGAGAATAAGAGCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp CAAAGTTGTCTAGCAGAAAGGTGTCTAACTTCTCCCTaGCTCCCTCGATGTTTACGCCGAAATCATCTAAGA +
Preference number: 6 (lower is better)
Translates to: QSCLAERCLTSP*LPRCLRRNHLR
Trigger: TCTTAGATGATTTCGGCGTAAACATCGAGGGAGTCAGGGAGAAGTTAGACACCTTTCTGCTAGACAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp TGGTTGGGGTCATCAAGCAAAACCGGATATTCTGAATaGTGGTATCGGTATGTCTCCAGCGTCTTCTATCAT +
Preference number: 6 (lower is better)
Translates to: WLGSSSKTGYSE*WYRYVSSVFYH
Trigger: ATGATAGAAGACGCTGGAGACATACCGATACCATCATTCAGAATATCCGGTTTTGCTTGATGACCCCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CAA 90 bp TGCTTGGAGGTGGAAGATGAGGTGATTCCACCGGTGATAAACAATTaGTTATTGAGCACTGTCCCCTCATGTCCATATTTGTTAACTGGA +
Preference number: 6 (lower is better)
Translates to: CLEVEDEVIPPVINN*LLSTVPSCPYLLTG
Trigger: TCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAATAACAAATTGTTTATCACCGGTGGAATCACCTCATCTTCCACCTCCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp CATAATTCTGAAGTAATCACTCTGGGTGGCCAAGAGTaGTTTATGGGCCTGGAACTGATGATCTTCAATAAC +
Preference number: 6 (lower is better)
Translates to: HNSEVITLGGQE*FMGLELMIFNN
Trigger: GTTATTGAAGATCATCAGTTCCAGGCCCATAAAGCACTCTTGGCCACCCAGAGTGATTACTTCAGAATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS GCA 72 bp ATGCTATGTCCAATCATTCCTCGAAATACTGTAGTTTaGGGTTTTGCAGAACGGATGCGGCTTGACTTCATA +
Preference number: 6 (lower is better)
Translates to: MLCPIIPRNTVV*GFAERMRLDFI
Trigger: TATGAAGTCAAGCCGCATCCGTTCTGCAAAACCGCAAACTACAGTATTTCGAGGAATGATTGGACATAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS TCA 72 bp TTCCCATTTATCGTTGGTGATGTCATATCTCTCAGTTaGATAGAAAGTCTCATCTCTGGTTCTGCCTGCTAC +
Preference number: 6 (lower is better)
Translates to: FPFIVGDVISLS*IESLISGSACY
Trigger: GTAGCAGGCAGAACCAGAGATGAGACTTTCTATTCAACTGAGAGATATGACATCACCAACGATAAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328046.8
CDS CCA 72 bp ATTGAGCACTGTCCCCTCATGTCCATATTTGTTAACTaGATAAGGATCCACAAATTCCCATTTATCGTTGGT +
Preference number: 6 (lower is better)
Translates to: IEHCPLMSIFVN*IRIHKFPFIVG
Trigger: ACCAACGATAAATGGGAATTTGTGGATCCTTATCCAGTTAACAAATATGGACATGAGGGGACAGTGCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328046.8