RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL13 (Homo sapiens)

Ensembl gene IDs: ENSG00000003096

Ensembl transcript IDs: ENST00000262820.7, ENST00000371876.5, ENST00000371878.5, ENST00000371882.5, ENST00000453826.1, ENST00000469946.5, ENST00000540167.5, ENST00000541812.5, ENST00000545703.5

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCAGGTGAAGCTGCTATACTTTGTGCTAAATAACCTTATGAACTaGGTATACAGAATACATATAATATGCAAGTTACCTCAACAGCAA +
Preference number: 1 (lower is better)
Translates to: LQVKLLYFVLNNLMN*VYRIHIICKLPQQQ
Trigger: TTGCTGTTGAGGTAACTTGCATATTATATGTATTCTGTATACTCAGTTCATAAGGTTATTTAGCACAAAGTATAGCAGCTTCACCTGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCCTGTTCAAGCAGGCTaGCTCCCTTTGACATCTTAC +
Preference number: 2 (lower is better)
Translates to: LYEKREVAHASWQPFVYCPVQAG*LPLTSY
Trigger: GTAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCAGGCTGCCTCCCTTTaGCATCTTACAGTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: LYEKREVAHASWQPFVYCQAASL*HLTVKD
Trigger: ATCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCCTGTTCAAGCAGGCTaGCTCCCTTTGACATCTTAC +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNPVQAG*LPLTSY
Trigger: GTAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNEGGSS*ELATFC
Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCAGGCTGCCTCCCTTTaGCATCTTACAGTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNQAASL*HLTVKD
Trigger: ATCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGGAAAACTTTTTACTTaGAGCCTAGTGAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILGKLFT*SLVSTV
Trigger: AACTGTGCTCACTAGGCTTCAAGTAAAAAGTTTTCC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGGAAAACTTTTTACTTaGAGCCTAGTGAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: LYEKREVAHASWQPFVYCGKLFT*SLVSTV
Trigger: AACTGTGCTCACTAGGCTTCAAGTAAAAAGTTTTCC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGTAGCTCATGCGAGTTaGCAACCTTTTGTGTATTGT +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNVAHAS*QPFVYC
Trigger: ACAATACACAAAAGGTTGCCAACTCGCATGAGCTAC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGGAAAACTTTTTACTTaGAGCCTAGTGAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNGKLFT*SLVSTV
Trigger: AACTGTGCTCACTAGGCTTCAAGTAAAAAGTTTTCC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATACTTTGTGTTCTCAATaGACCCACACAGTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHTLCSQ*THTVKW
Trigger: CCACTTGACTGTGTGGGTGCATTGAGAACACAAAGT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAATCCACCTTCAACTTaGCTTATTGGGTTTACTAAT +
Preference number: 2 (lower is better)
Translates to: LYEKREVAHASWQPFVYCNPPST*LIGFTN
Trigger: ATTAGTAAACCCAATAAGCCAAGTTGAAGGTGGATT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAATCCACCTTCAACTTaGCTTATTGGGTTTACTAAT +
Preference number: 2 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNNPPST*LIGFTN
Trigger: ATTAGTAAACCCAATAAGCCAAGTTGAAGGTGGATT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGTAGCTCATGCGAGTTaGCAACCTTTTGTGTATTGT +
Preference number: 2 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHVAHAS*QPFVYC
Trigger: ACAATACACAAAAGGTTGCCAACTCGCATGAGCTAC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATACCCACACAGTCAAGTaGGTTGACAGATATGTCAAA +
Preference number: 2 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHTHTVK*VDRYVK
Trigger: TTTGACATATCTGTCAACCCACTTGACTGTGTGGGT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCACAGTCAAGTGGGTTaGCAGATATGTCAAAAATAC +
Preference number: 2 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHHSQVG*QICQKY
Trigger: GTATTTTTGACATATCTGTCAACCCACTTGACTGTG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR CAA 90 bp TCATATGTTAAACATCAGCTTCTATGGGATACATTTCCAGAATGGTaGTGTTACCACTTTATAAACATTCTAGGCCAAACAAAGAGCACA +
Preference number: 2 (lower is better)
Translates to: SYVKHQLLWDTFPEW*CYHFINILGQTKST
Trigger: TGTGCTCTTTGTTTGGCCTAGAATGTTTATAAAGTGGTAACACAACCATTCTGGAAATGTATCCCATAGAAGCTGATGTTTAACATATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAATCCACCTTCAACTTaGCTTATTGGGTTTACTAAT +
Preference number: 2 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHNPPST*LIGFTN
Trigger: ATTAGTAAACCCAATAAGCCAAGTTGAAGGTGGATT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGCAGGCTGCCTCCCTTaGACATCTTACAGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: LYEKREVAHASWQPFVYCAGCLP*TSYSQR
Trigger: TCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTGC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGCAGGCTGCCTCCCTTaGACATCTTACAGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNAGCLP*TSYSQR
Trigger: TCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTGC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTATTG +
Preference number: 3 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNGSSCE*ATFCVL
Trigger: CAATACACAAAAGGTTGCCAACTCGCATGAGCTACC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTATTG +
Preference number: 3 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHGSSCE*ATFCVL
Trigger: CAATACACAAAAGGTTGCCAACTCGCATGAGCTACC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCGAGTTGGCAACCTTTaGTGTATTGTTTCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHRVGNL*CIVSCS
Trigger: TGAACAGGAAACAATACACAAAAGGTTGCCAACTCG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
3UTR TCA 72 bp CCTTCAACTTGGCTTATTGGGTTTACTAATGTAAGATaGCAAATACCTTACACCCAATACACAGCATTTAAA +
Preference number: 3 (lower is better)
Translates to: PSTWLIGFTNVR*QIPYTQYTAFK
Trigger: TTTAAATGCTGTGTATTGGGTGTAAGGTATTTGTCATCTTACATTAGTAAACCCAATAAGCCAAGTTGAAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGGCAGAGCCTCCGCCTaGCCTCACCAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCGRASA*PHQGVG
Trigger: CCCCACACCCTGGTGAGGTCAGGCGGAGGCTCTGCC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATTGCTCGCCGCGTCCTaGCGTCCCGCCGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILLLAAS*RPAACP
Trigger: CGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTTGCTCGCCGCGTCCTaGCGTCCCGCCGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLLAAS*RPAACP
Trigger: CGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCGCTTGTCCGCCGGGTaGTGCGCTCCGAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCRLSAG*CAPRAK
Trigger: TTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCCCAGGAATAGGAGCTaGGCTACTGCGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCPRNRS*ATAAAA
Trigger: CGCTGCGGCCGCAGTAGCTCAGCTCCTATTCCTGGG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTTGTCCGCCGGGTGCTaGGCTCCGAGGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLSAGC*APRAKE
Trigger: CTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCACTTCACCCTGTCCTaGCGCAGGCGGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHFTLS*RRRRAR
Trigger: CCGTGCTCTCCGCCTGCGCCAGGACAGGGTGAAGTG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACACCTTCGCACCCTCTaGTCGCCCCGACCACTTCAC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILHLRTL*SPRPLH
Trigger: GTGAAGTGGTCGGGGCGAGCAGAGGGTGCGAAGGTG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGCCGGGGCTCCCTCCTaGTGCGAGGCACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHAGAPS*CEAPAP
Trigger: GGGTGCTGGTGCCTCGCAGCAGGAGGGAGCCCCGGC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTTGTCCGCCGGGTGCTaGGCTCCGAGGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLSAGC*APRAKE
Trigger: CTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCACTTCACCCTGTCCTaGCGCAGGCGGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNHFTLS*RRRRAR
Trigger: CCGTGCTCTCCGCCTGCGCCAGGACAGGGTGAAGTG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGGCAGAGCCTCCGCCTaGCCTCACCAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEGRASA*PHQGVG
Trigger: CCCCACACCCTGGTGAGGTCAGGCGGAGGCTCTGCC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATTGCTCGCCGCGTCCTaGCGTCCCGCCGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGELLAAS*RPAACP
Trigger: CGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAATGACGGCGATGCCATaGTGGTACCTTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILMTAMP*WYLGAS
Trigger: GGATGCCCCAAGGTACCAGCATGGCATCGCCGTCAT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTATGACGGCGATGCCATaGTGGTACCTTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCMTAMP*WYLGAS
Trigger: GGATGCCCCAAGGTACCAGCATGGCATCGCCGTCAT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCGCTTGTCCGCCGGGTaGTGCGCTCCGAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHRLSAG*CAPRAK
Trigger: TTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTACGGCGATGCCATGCTaGTACCTTGGGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCTAMPC*YLGASM
Trigger: CATGGATGCCCCAAGGTACCAGCATGGCATCGCCGT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACGGCGATGCCATGCTaGTACCTTGGGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTAMPC*YLGASM
Trigger: CATGGATGCCCCAAGGTACCAGCATGGCATCGCCGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAGACTGCAAATGGGATaGGAGGCCCATTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCRLQMG*EAHFAA
Trigger: GGCAGCGAAATGGGCCTCTCATCCCATTTGCAGTCT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAGACTGCAAATGGGATaGGAGGCCCATTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILRLQMG*EAHFAA
Trigger: GGCAGCGAAATGGGCCTCTCATCCCATTTGCAGTCT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCCCAGGAATAGGAGCTaGGCTACTGCGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHPRNRS*ATAAAA
Trigger: CGCTGCGGCCGCAGTAGCTCAGCTCCTATTCCTGGG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACCTGCCTTGGAAGACTaGAAATGGGATGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILPALED*KWDERP
Trigger: GGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCCTGCCTTGGAAGACTaGAAATGGGATGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCPALED*KWDERP
Trigger: GGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATATGACGGCGATGCCATaGTGGTACCTTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNMTAMP*WYLGAS
Trigger: GGATGCCCCAAGGTACCAGCATGGCATCGCCGTCAT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATACGGCGATGCCATGCTaGTACCTTGGGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNTAMPC*YLGASM
Trigger: CATGGATGCCCCAAGGTACCAGCATGGCATCGCCGT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAGACTGCAAATGGGATaGGAGGCCCATTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNRLQMG*EAHFAA
Trigger: GGCAGCGAAATGGGCCTCTCATCCCATTTGCAGTCT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACCTGCTTTCCTCCTGTaGAAGCTCTGGCCACACAAA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILPAFLL*KLWPHK
Trigger: TTTGTGTGGCCAGAGCTTGCACAGGAGGAAAGCAGG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCCTGCCTTGGAAGACTaGAAATGGGATGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNPALED*KWDERP
Trigger: GGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGTGTGCAAGCACGAATaGCACCAAGGGATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILVCKHE*HQGILA
Trigger: TGCCAGAATCCCTTGGTGGCATTCGTGCTTGCACAC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGTGTGCAAGCACGAATaGCACCAAGGGATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCVCKHE*HQGILA
Trigger: TGCCAGAATCCCTTGGTGGCATTCGTGCTTGCACAC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAATCTCTGGATCACCTaGCTAAGAGTGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILNLWIT*LRVGSP
Trigger: TGGGCTCCCCACTCTTAGGCAGGTGATCCAGAGATT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACACCTTCGCACCCTCTaGTCGCCCCGACCACTTCAC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEHLRTL*SPRPLH
Trigger: GTGAAGTGGTCGGGGCGAGCAGAGGGTGCGAAGGTG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACCTTGGGGCATCCATaGGGGCTAACGATTTCCACT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTLGHP*GLTIST
Trigger: AGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTACCTTGGGGCATCCATaGGGGCTAACGATTTCCACT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCTLGHP*GLTIST
Trigger: AGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGGACTCTCTAGAAGGTaGTGGTGTGGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILGLSRR*WCGFFW
Trigger: CCAGAAGAAACCACACCATCACCTTCTAGAGAGTCC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGGACTCTCTAGAAGGTaGTGGTGTGGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCGLSRR*WCGFFW
Trigger: CCAGAAGAAACCACACCATCACCTTCTAGAGAGTCC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAAGCAGCTCTCCAGGTaGAGCTGCTATACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILKQLSR*SCYTLC
Trigger: GCACAAAGTATAGCAGCTTCACCTGGAGAGCTGCTT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAAGCAGCTCTCCAGGTaGAGCTGCTATACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCKQLSR*SCYTLC
Trigger: GCACAAAGTATAGCAGCTTCACCTGGAGAGCTGCTT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAGAGGCCCATTTCGCTaGCTCCAAGGGACAATTTCA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILRGPFR*LQGTIS
Trigger: TGAAATTGTCCCTTGGAGGCAGCGAAATGGGCCTCT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAGAGGCCCATTTCGCTaGCTCCAAGGGACAATTTCA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCRGPFR*LQGTIS
Trigger: TGAAATTGTCCCTTGGAGGCAGCGAAATGGGCCTCT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGATGCGTGTAGGTCCTaGCTTGGAAGACTGCAAATG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILDACRS*LGRLQM
Trigger: CATTTGCAGTCTTCCAAGGCAGGACCTACACGCATC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGATGCGTGTAGGTCCTaGCTTGGAAGACTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCDACRS*LGRLQM
Trigger: CATTTGCAGTCTTCCAAGGCAGGACCTACACGCATC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTACCCCAACATCACTCTaGCCTCTTAACATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCTPTSL*PLNMAA
Trigger: TGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACCCCAACATCACTCTaGCCTCTTAACATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTPTSL*PLNMAA
Trigger: TGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACCTGTTCAAGCAGGCTaGCTCCCTTTGACATCTTAC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILPVQAG*LPLTSY
Trigger: GTAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCEGGSS*ELATFC
Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILEGGSS*ELATFC
Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACCTTCAAGTCGAAGCTaGTCAAAGCCCTGTAACACC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILPSSRS*SKPCNT
Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGACTTGAAGG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCCTTCAAGTCGAAGCTaGTCAAAGCCCTGTAACACC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCPSSRS*SKPCNT
Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGACTTGAAGG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATACCTTGGGGCATCCATaGGGGCTAACGATTTCCACT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNTLGHP*GLTIST
Trigger: AGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATCTGCCCTCTTAACATaGCAGCAATTGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILSALLT*QQLGST
Trigger: AGTGGACCCCAATTGCTGCCATGTTAAGAGGGCAGA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTCTGCCCTCTTAACATaGCAGCAATTGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCSALLT*QQLGST
Trigger: AGTGGACCCCAATTGCTGCCATGTTAAGAGGGCAGA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACATTCCACACTGTACTaGCACAGCAGTGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEHSTLY*HSSGCR
Trigger: GCGGCAGCCACTGCTGTGTCAGTACAGTGTGGAATG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAGAGAAAATTTCCAATaGCGGCGATGCCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILRENFQ*RRCHAG
Trigger: ACCAGCATGGCATCGCCGTCATTGGAAATTTTCTCT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAGAGAAAATTTCCAATaGCGGCGATGCCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCRENFQ*RRCHAG
Trigger: ACCAGCATGGCATCGCCGTCATTGGAAATTTTCTCT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGGACTCTCTAGAAGGTaGTGGTGTGGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNGLSRR*WCGFFW
Trigger: CCAGAAGAAACCACACCATCACCTTCTAGAGAGTCC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAAATTCCAGTCCCTCTaGTTTCCAGCTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILKFQSL*FPARRR
Trigger: CCTTCTCCTAGCTGGAAAGCAGAGGGACTGGAATTT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGATGCGTGTAGGTCCTaGCTTGGAAGACTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNDACRS*LGRLQM
Trigger: CATTTGCAGTCTTCCAAGGCAGGACCTACACGCATC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATATGACGGCGATGCCATaGTGGTACCTTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHMTAMP*WYLGAS
Trigger: GGATGCCCCAAGGTACCAGCATGGCATCGCCGTCAT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAATGACGGCGATGCCATaGTGGTACCTTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEMTAMP*WYLGAS
Trigger: GGATGCCCCAAGGTACCAGCATGGCATCGCCGTCAT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATACCCCAACATCACTCTaGCCTCTTAACATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNTPTSL*PLNMAA
Trigger: TGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCTCCTGTGCAAGCTCTaGCCACACAAATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLLCKL*PHKSRM
Trigger: CATTCTTGATTTGTGTGGCCAGAGCTTGCACAGGAG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGTACTGACACAGCAGTaGCTGCCGCGGAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHVLTQQ*LPRRTS
Trigger: GCTTGTTCTCCGCGGCAGCCACTGCTGTGTCAGTAC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGAATCTGTAGGAAACTaGCAGCTTCCAGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILESVGN*QLPACL
Trigger: AAGACACGCTGGAAGCTGCCAGTTTCCTACAGATTC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGAATCTGTAGGAAACTaGCAGCTTCCAGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCESVGN*QLPACL
Trigger: AAGACACGCTGGAAGCTGCCAGTTTCCTACAGATTC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATACGGCGATGCCATGCTaGTACCTTGGGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHTAMPC*YLGASM
Trigger: CATGGATGCCCCAAGGTACCAGCATGGCATCGCCGT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAACGGCGATGCCATGCTaGTACCTTGGGGCATCCATG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGETAMPC*YLGASM
Trigger: CATGGATGCCCCAAGGTACCAGCATGGCATCGCCGT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATCTGACAGTGGTCATTaGCGCCTTCTGGATCCATTT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILSDSGH*RLLDPF
Trigger: AAATGGATCCAGAAGGCGCCAATGACCACTGTCAGA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTCTGCCCTCTTAACATaGCAGCAATTGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNSALLT*QQLGST
Trigger: AGTGGACCCCAATTGCTGCCATGTTAAGAGGGCAGA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAGAGTGGGGAGCCCATaGCTCATGAATTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNRVGSP*LMNLVL
Trigger: CAGAACCAAATTCATGAGCCATGGGCTCCCCACTCT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGCTAATAGAGATCAGTaGCTAAATTCAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCANRDQ*LNSAAC
Trigger: GCAGGCTGCTGAATTTAGTCACTGATCTCTATTAGC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAGACTGCAAATGGGATaGGAGGCCCATTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGERLQMG*EAHFAA
Trigger: GGCAGCGAAATGGGCCTCTCATCCCATTTGCAGTCT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAGAGAAAATTTCCAATaGCGGCGATGCCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNRENFQ*RRCHAG
Trigger: ACCAGCATGGCATCGCCGTCATTGGAAATTTTCTCT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACATACAGATATCCTTTaGGGGCACTTAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILHTDIL*GHLGGR
Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCATACAGATATCCTTTaGGGGCACTTAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHTDIL*GHLGGR
Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATATCACTCTCTCTTCTaGAGCAGCGAAGTACAGAGT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILYHSLF*SSEVQS
Trigger: ACTCTGTACTTCGCTGCTGCAGAAGAGAGAGTGATA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCCTGCCTTGGAAGACTaGAAATGGGATGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHPALED*KWDERP
Trigger: GGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACCTGCCTTGGAAGACTaGAAATGGGATGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEPALED*KWDERP
Trigger: GGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATCAAGAACTCCCCTGTaGTCAGCAATGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILSRTPL*SAMQEN
Trigger: ATTTTCCTGCATTGCTGAGCACAGGGGAGTTCTTGA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTCAAGAACTCCCCTGTaGTCAGCAATGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCSRTPL*SAMQEN
Trigger: ATTTTCCTGCATTGCTGAGCACAGGGGAGTTCTTGA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGAGATGATCTTAAGGTaGAGAAAGAGGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILEMILR*RKRGLS
Trigger: AGAGAGTCCCCTCTTTCTGCACCTTAAGATCATCTC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACTTTGTGTTCTCAATaGACCCACACAGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTLCSQ*THTVKW
Trigger: CCACTTGACTGTGTGGGTGCATTGAGAACACAAAGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTACTTTGTGTTCTCAATaGACCCACACAGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCTLCSQ*THTVKW
Trigger: CCACTTGACTGTGTGGGTGCATTGAGAACACAAAGT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTCCTGTGCAAGCTCTaGCCACACAAATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLLCKL*PHKSRM
Trigger: CATTCTTGATTTGTGTGGCCAGAGCTTGCACAGGAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATGTAACATTCTACTGTaGGCAGTTCACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILCNILL*AVHLLH
Trigger: ATGCAGCAGGTGAACTGCCCACAGTAGAATGTTACA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGTCATTGGCGCCTTCTaGATCCATTTGTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCVIGAF*IHLSVS
Trigger: TGATACTGACAAATGGATCCAGAAGGCGCCAATGAC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGTCATTGGCGCCTTCTaGATCCATTTGTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILVIGAF*IHLSVS
Trigger: TGATACTGACAAATGGATCCAGAAGGCGCCAATGAC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTCTGACAGTGGTCATTaGCGCCTTCTGGATCCATTT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNSDSGH*RLLDPF
Trigger: AAATGGATCCAGAAGGCGCCAATGACCACTGTCAGA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATATTGTCAGTTCTCATaGAATCCACCGTTTGCACGT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILYCQFS*NPPFAR
Trigger: ACGTGCAAACGGTGGATTTCATGAGAACTGACAATA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCATACAGATATCCTTTaGGGGCACTTAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNHTDIL*GHLGGR
Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTCCCCTCTATGCAGATaGTCCATCACCTCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNSPLCR*SITSKS
Trigger: ACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR GCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCACACAAATCAAGAATaGCATTATGGGAAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHTNQE*HYGKSP
Trigger: CGGGCTTTTCCCATAATGGCATTCTTGATTTGTGTG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCCTGCTTTCCTCCTGTaGAAGCTCTGGCCACACAAA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHPAFLL*KLWPHK
Trigger: TTTGTGTGGCCAGAGCTTGCACAGGAGGAAAGCAGG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATTTAGGACTGCACTGTaGATACCATACAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILFRTAL*IPYNAA
Trigger: AGCTGCATTGTATGGTATGCACAGTGCAGTCCTAAA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTCAAGAACTCCCCTGTaGTCAGCAATGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNSRTPL*SAMQEN
Trigger: ATTTTCCTGCATTGCTGAGCACAGGGGAGTTCTTGA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGTGTGCAAGCACGAATaGCACCAAGGGATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEVCKHE*HQGILA
Trigger: TGCCAGAATCCCTTGGTGGCATTCGTGCTTGCACAC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGTGTGCAAGCACGAATaGCACCAAGGGATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHVCKHE*HQGILA
Trigger: TGCCAGAATCCCTTGGTGGCATTCGTGCTTGCACAC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGAGATGATCTTAAGGTaGAGAAAGAGGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNEMILR*RKRGLS
Trigger: AGAGAGTCCCCTCTTTCTGCACCTTAAGATCATCTC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAATGCAGCCCTTTCTTaGCAACATAATATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILNAALS*QHNMLA
Trigger: GGCAAGCATATTATGTTGGCAAGAAAGGGCTGCATT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAACCTTGGGGCATCCATaGGGGCTAACGATTTCCACT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGETLGHP*GLTIST
Trigger: AGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATACCTTGGGGCATCCATaGGGGCTAACGATTTCCACT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHTLGHP*GLTIST
Trigger: AGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTGTAACATTCTACTGTaGGCAGTTCACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNCNILL*AVHLLH
Trigger: ATGCAGCAGGTGAACTGCCCACAGTAGAATGTTACA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGTCATTGGCGCCTTCTaGATCCATTTGTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNVIGAF*IHLSVS
Trigger: TGATACTGACAAATGGATCCAGAAGGCGCCAATGAC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGTAGCTCATGCGAGTTaGCAACCTTTTGTGTATTGT +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCVAHAS*QPFVYC
Trigger: ACAATACACAAAAGGTTGCCAACTCGCATGAGCTAC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGTAGCTCATGCGAGTTaGCAACCTTTTGTGTATTGT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILVAHAS*QPFVYC
Trigger: ACAATACACAAAAGGTTGCCAACTCGCATGAGCTAC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACCCACACAGTCAAGTaGGTTGACAGATATGTCAAA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTHTVK*VDRYVK
Trigger: TTTGACATATCTGTCAACCCACTTGACTGTGTGGGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTATCACCTCTAAAAGTTaGATAATGACCTTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCITSKS*IMTLLA
Trigger: GGCGAGCAAGGTCATTATCCAACTTTTAGAGGTGAT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTGCACCTATTAACCTaGTTTCTGACCAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLHLLT*FLTNSS
Trigger: GCTACTATTGGTCAGAAATCAGGTTAATAGGTGCAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTATTGTCAGTTCTCATaGAATCCACCGTTTGCACGT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNYCQFS*NPPFAR
Trigger: ACGTGCAAACGGTGGATTTCATGAGAACTGACAATA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGGACTCTCTAGAAGGTaGTGGTGTGGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEGLSRR*WCGFFW
Trigger: CCAGAAGAAACCACACCATCACCTTCTAGAGAGTCC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGGACTCTCTAGAAGGTaGTGGTGTGGTTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHGLSRR*WCGFFW
Trigger: CCAGAAGAAACCACACCATCACCTTCTAGAGAGTCC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCACAGTCAAGTGGGTTaGCAGATATGTCAAAAATAC +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHSQVG*QICQKY
Trigger: GTATTTTTGACATATCTGTCAACCCACTTGACTGTG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACACAGTCAAGTGGGTTaGCAGATATGTCAAAAATAC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILHSQVG*QICQKY
Trigger: GTATTTTTGACATATCTGTCAACCCACTTGACTGTG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAAGCAGCTCTCCAGGTaGAGCTGCTATACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHKQLSR*SCYTLC
Trigger: GCACAAAGTATAGCAGCTTCACCTGGAGAGCTGCTT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAAGCAGCTCTCCAGGTaGAGCTGCTATACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEKQLSR*SCYTLC
Trigger: GCACAAAGTATAGCAGCTTCACCTGGAGAGCTGCTT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAATCTAGGTCTAGTCTaGTTCCCACTCCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHNLGLV*FPLQTP
Trigger: GGGGGTTTGGAGTGGGAATCAGACTAGACCTAGATT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAGAGGCCCATTTCGCTaGCTCCAAGGGACAATTTCA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHRGPFR*LQGTIS
Trigger: TGAAATTGTCCCTTGGAGGCAGCGAAATGGGCCTCT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAGAGGCCCATTTCGCTaGCTCCAAGGGACAATTTCA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGERGPFR*LQGTIS
Trigger: TGAAATTGTCCCTTGGAGGCAGCGAAATGGGCCTCT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGATGCGTGTAGGTCCTaGCTTGGAAGACTGCAAATG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEDACRS*LGRLQM
Trigger: CATTTGCAGTCTTCCAAGGCAGGACCTACACGCATC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGATGCGTGTAGGTCCTaGCTTGGAAGACTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHDACRS*LGRLQM
Trigger: CATTTGCAGTCTTCCAAGGCAGGACCTACACGCATC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAACCCCAACATCACTCTaGCCTCTTAACATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGETPTSL*PLNMAA
Trigger: TGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACCTGTTCAAGCAGGCTaGCTCCCTTTGACATCTTAC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEPVQAG*LPLTSY
Trigger: GTAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGAGGGAGGTAGCTCATaGGAGTTGGCAACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHEGGSS*ELATFC
Trigger: ACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAACTGTTCTTCAACATTaGAAGGAGGTAACACTTCTC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILTVLQH*KEVTLL
Trigger: GAGAAGTGTTACCTCCTTGCAATGTTGAAGAACAGT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACCTTCAAGTCGAAGCTaGTCAAAGCCCTGTAACACC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEPSSRS*SKPCNT
Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGACTTGAAGG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCCTTCAAGTCGAAGCTaGTCAAAGCCCTGTAACACC +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHPSSRS*SKPCNT
Trigger: GGTGTTACAGGGCTTTGACCAGCTTCGACTTGAAGG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAACGATTTCCACTCATaGGCCTTTTCATCATACATG +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILNDFHS*AFSSYM
Trigger: CATGTATGATGAAAAGGCCCATGAGTGGAAATCGTT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTAACGATTTCCACTCATaGGCCTTTTCATCATACATG +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCNDFHS*AFSSYM
Trigger: CATGTATGATGAAAAGGCCCATGAGTGGAAATCGTT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATCTGCCCTCTTAACATaGCAGCAATTGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGESALLT*QQLGST
Trigger: AGTGGACCCCAATTGCTGCCATGTTAAGAGGGCAGA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATACCCACACAGTCAAGTaGGTTGACAGATATGTCAAA +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNTHTVK*VDRYVK
Trigger: TTTGACATATCTGTCAACCCACTTGACTGTGTGGGT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAATTTCCAAGCTGAGATaGGCAAAATCTCACACATTT +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILISKLR*AKSHTF
Trigger: AAATGTGTGAGATTTTGCTCATCTCAGCTTGGAAAT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATTCTTATTTCCAAGCTaGGATGAGCAAAATCTCACA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILFLFPS*DEQNLT
Trigger: TGTGAGATTTTGCTCATCTCAGCTTGGAAATAAGAA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAGAGAAAATTTCCAATaGCGGCGATGCCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGERENFQ*RRCHAG
Trigger: ACCAGCATGGCATCGCCGTCATTGGAAATTTTCTCT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACAGGCTGCCTCCCTTTaGCATCTTACAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEQAASL*HLTVKD
Trigger: ATCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCAGGCTGCCTCCCTTTaGCATCTTACAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHQAASL*HLTVKD
Trigger: ATCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCACAGTCAAGTGGGTTaGCAGATATGTCAAAAATAC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNHSQVG*QICQKY
Trigger: GTATTTTTGACATATCTGTCAACCCACTTGACTGTG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGGAGCCCATGGCTCATaGATTTGGTTCTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEGAHGS*IWFCIH
Trigger: ATGAATGCAGAACCAAATTCATGAGCCATGGGCTCC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAAATTCCAGTCCCTCTaGTTTCCAGCTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHKFQSL*FPARRR
Trigger: CCTTCTCCTAGCTGGAAAGCAGAGGGACTGGAATTT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATTTGGTAACAGTACATaGCATGTTAACCTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILFGNST*HVNLLS
Trigger: GCTAAGAAGGTTAACATGGCATGTACTGTTACCAAA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTCCCTACTAATTTCTaGTTTGGTAACAGTACATGC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLPTNF*FGNSTC
Trigger: GCATGTACTGTTACCAAAGCAGAAATTAGTAGGGAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CCA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATCAAGAATGCCATTATaGGAAAAGCCCGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILSRMPL*EKPVSK
Trigger: TTTTGAAACGGGCTTTTCCCATAATGGCATTCTTGA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGAATCTGTAGGAAACTaGCAGCTTCCAGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHESVGN*QLPACL
Trigger: AAGACACGCTGGAAGCTGCCAGTTTCCTACAGATTC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGAATCTGTAGGAAACTaGCAGCTTCCAGCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEESVGN*QLPACL
Trigger: AAGACACGCTGGAAGCTGCCAGTTTCCTACAGATTC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAACGATTTCCACTCATaGGCCTTTTCATCATACATG +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNNDFHS*AFSSYM
Trigger: CATGTATGATGAAAAGGCCCATGAGTGGAAATCGTT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATCTGACAGTGGTCATTaGCGCCTTCTGGATCCATTT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGESDSGH*RLLDPF
Trigger: AAATGGATCCAGAAGGCGCCAATGACCACTGTCAGA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTCTGACAGTGGTCATTaGCGCCTTCTGGATCCATTT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSDSGH*RLLDPF
Trigger: AAATGGATCCAGAAGGCGCCAATGACCACTGTCAGA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATGGAGAAAGTGGAGTTaGCCTGGATGTTTTAAGCAC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEWRKWS*PGCFKH
Trigger: GTGCTTAAAACATCCAGGTCAACTCCACTTTCTCCA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACATACAGATATCCTTTaGGGGCACTTAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEHTDIL*GHLGGR
Trigger: TCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGGAAAAGTCAGAAATTaGTTGATGGTGACTGTTATC +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNGKVRN*LMVTVI
Trigger: GATAACAGTCACCATCAATCAATTTCTGACTTTTCC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTCCCCTCTATGCAGATaGTCCATCACCTCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSPLCR*SITSKS
Trigger: ACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATCAAGAACTCCCCTGTaGTCAGCAATGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGESRTPL*SAMQEN
Trigger: ATTTTCCTGCATTGCTGAGCACAGGGGAGTTCTTGA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGAGATGATCTTAAGGTaGAGAAAGAGGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHEMILR*RKRGLS
Trigger: AGAGAGTCCCCTCTTTCTGCACCTTAAGATCATCTC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGAGATGATCTTAAGGTaGAGAAAGAGGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEEMILR*RKRGLS
Trigger: AGAGAGTCCCCTCTTTCTGCACCTTAAGATCATCTC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAACTTTGTGTTCTCAATaGACCCACACAGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGETLCSQ*THTVKW
Trigger: CCACTTGACTGTGTGGGTGCATTGAGAACACAAAGT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGAGGTAACACTTCTCTaGAAACCCCAAGCCACAATT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEEVTLL*KPQATI
Trigger: AATTGTGGCTTGGGGTTTGCAGAGAAGTGTTACCTC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAGTTTCTGTATTCCCTaGACAGAGCCTAGCACGAAA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSFCIP*TEPSTK
Trigger: TTTCGTGCTAGGCTCTGTGCAGGGAATACAGAAACT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR GCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTCGGTTACGAAGTATTaGAGCAACCAATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSVTKY*SNQFPS
Trigger: AGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATCGGTTACGAAGTATTaGAGCAACCAATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGESVTKY*SNQFPS
Trigger: AGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTGTAACATTCTACTGTaGGCAGTTCACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHCNILL*AVHLLH
Trigger: ATGCAGCAGGTGAACTGCCCACAGTAGAATGTTACA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATGTAACATTCTACTGTaGGCAGTTCACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGECNILL*AVHLLH
Trigger: ATGCAGCAGGTGAACTGCCCACAGTAGAATGTTACA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGTCATTGGCGCCTTCTaGATCCATTTGTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHVIGAF*IHLSVS
Trigger: TGATACTGACAAATGGATCCAGAAGGCGCCAATGAC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGTCATTGGCGCCTTCTaGATCCATTTGTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEVIGAF*IHLSVS
Trigger: TGATACTGACAAATGGATCCAGAAGGCGCCAATGAC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTCTCACTTACCAGTTTaGGATTGTTTAATAGCTACA +
Preference number: 4 (lower is better)
Translates to: LYEKREVAHASWQPFVYCSHLPV*DCLIAT
Trigger: TGTAGCTATTAAACAATCCCAAACTGGTAAGTGAGA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATATTGTCAGTTCTCATaGAATCCACCGTTTGCACGT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEYCQFS*NPPFAR
Trigger: ACGTGCAAACGGTGGATTTCATGAGAACTGACAATA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTATTGTCAGTTCTCATaGAATCCACCGTTTGCACGT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHYCQFS*NPPFAR
Trigger: ACGTGCAAACGGTGGATTTCATGAGAACTGACAATA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATAAGAAGAATATAAACTaGTTCAGAACTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNKKNIN*FRTLQV
Trigger: AACCTGCAGAGTTCTGAAGCAGTTTATATTCTTCTT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACACACAAATCAAGAATaGCATTATGGGAAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEHTNQE*HYGKSP
Trigger: CGGGCTTTTCCCATAATGGCATTCTTGATTTGTGTG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAAGCTGAATTCACATTaGCACAATGACATATCCCGG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEKLNSH*HNDISR
Trigger: CCGGGATATGTCATTGTGGCAATGTGAATTCAGCTT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGTAGCTCATGCGAGTTaGCAACCTTTTGTGTATTGT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEVAHAS*QPFVYC
Trigger: ACAATACACAAAAGGTTGCCAACTCGCATGAGCTAC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAACCCACACAGTCAAGTaGGTTGACAGATATGTCAAA +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGETHTVK*VDRYVK
Trigger: TTTGACATATCTGTCAACCCACTTGACTGTGTGGGT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATATCACCTCTAAAAGTTaGATAATGACCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHITSKS*IMTSVG
Trigger: CCCCACTGAGGTCATTATCCAACTTTTAGAGGTGAT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541812.5
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTCTTCTAGTAGCTTCTaGTTCAAGTTGCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSSSSF*FKLLSF
Trigger: AAAGGAGAGCAACTTGAATCAGAAGCTACTAGAAGA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR TCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGGAAAACTTTTTACTTaGAGCCTAGTGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHGKLFT*SLVSTV
Trigger: AACTGTGCTCACTAGGCTTCAAGTAAAAAGTTTTCC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGGAAAACTTTTTACTTaGAGCCTAGTGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEGKLFT*SLVSTV
Trigger: AACTGTGCTCACTAGGCTTCAAGTAAAAAGTTTTCC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR TCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACACAGTCAAGTGGGTTaGCAGATATGTCAAAAATAC +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEHSQVG*QICQKY
Trigger: GTATTTTTGACATATCTGTCAACCCACTTGACTGTG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR GCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGCTTCTGATTCAAGTTaGTCTCCTTTCCCTATTCTT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEASDSS*SPFPIL
Trigger: AAGAATAGGGAAAGGAGAGCAACTTGAATCAGAAGC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAACGATTTCCACTCATaGGCCTTTTCATCATACATG +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGENDFHS*AFSSYM
Trigger: CATGTATGATGAAAAGGCCCATGAGTGGAAATCGTT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAACGATTTCCACTCATaGGCCTTTTCATCATACATG +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHNDFHS*AFSSYM
Trigger: CATGTATGATGAAAAGGCCCATGAGTGGAAATCGTT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATAACCACTTATTAAAGTaGTTGGCCCAGGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHNHLLK*LAQGLN
Trigger: ATTCAAACCCTGGGCCAACCACTTTAATAAGTGGTT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CCA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATTCAAGAATGCCATTATaGGAAAAGCCCGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHSRMPL*EKPVSK
Trigger: TTTTGAAACGGGCTTTTCCCATAATGGCATTCTTGA...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATTTGTCATGTTCTTGTaGATCCCTCTCTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGEFVMFL*IPLSSN
Trigger: ATTTGATGAGAGAGGGATCCACAAGAACATGACAAA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469946.5
CDS-3UTR CCA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAAATCCACCTTCAACTTaGCTTATTGGGTTTACTAAT +
Preference number: 4 (lower is better)
Translates to: ICINYQRVILTYILLKGENPPST*LIGFTN
Trigger: ATTAGTAAACCCAATAAGCCAAGTTGAAGGTGGATT...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS GCA 90 bp CTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTTGTCCGCCGGGTGCTaGGCTCCGAGGGCCAAAGAGGGAGTCGCGCGGCGCAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LARRVLASRRLSAGC*APRAKEGVARRSRG
Trigger: GCCCCGGCTGCGCCGCGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS GCA 90 bp GACCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTTGTCCGCCGGGTaGTGCGCTCCGAGGGCCAAAGAGGGAGTCGCGCGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: DLARRVLASRRLSAG*CAPRAKEGVARRSR
Trigger: CCGGCTGCGCCGCGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGGTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS GCA 90 bp GGGCCAAAGAGGGAGTCGCGCGGCGCAGCCGGGGCTCCCTCCTGCTaGGAGGCACCAGCACCCGCACCTTCGCACCCTCTGCTCGCCCCG +
Preference number: 5 (lower is better)
Translates to: GPKRESRGAAGAPSC*EAPAPAPSHPLLAP
Trigger: CGGGGCGAGCAGAGGGTGCGAAGGTGCGGGTGCTGGTGCCTCGCAGCAGGAGGGAGCCCCGGCTGCGCCGCGCGACTCCCTCTTTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS GCA 90 bp GATCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTTGTCCGCCGGGTaGTGCGCTCCGAGGGCCAAAGAGGGAGTCGCGCGGCGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: DLARRVLASRRLSAG*CAPRAKEGVARRSR
Trigger: CCGGCTGCGCCGCGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGATC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS GCA 90 bp CGAGGGCCAAAGAGGGAGTCGCGCGGCGCAGCCGGGGCTCCCTCCTaGTGCGAGGCACCAGCACCCGCACCTTCGCACCCTCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: RGPKRESRGAAGAPS*CEAPAPAPSHPLLA
Trigger: GGCGAGCAGAGGGTGCGAAGGTGCGGGTGCTGGTGCCTCGCAGCAGGAGGGAGCCCCGGCTGCGCCGCGCGACTCCCTCTTTGGCCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS GCA 90 bp CTCCCTCCTGCTGCGAGGCACCAGCACCCGCACCTTCGCACCCTCTaGTCGCCCCGACCACTTCACCCTGTCCTGGCGCAGGCGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LPPAARHQHPHLRTL*SPRPLHPVLAQAES
Trigger: GCTCTCCGCCTGCGCCAGGACAGGGTGAAGTGGTCGGGGCGAGCAGAGGGTGCGAAGGTGCGGGTGCTGGTGCCTCGCAGCAGGAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS CCA 90 bp CGCACCTTCGCACCCTCTGCTCGCCCCGACCACTTCACCCTGTCCTaGCGCAGGCGGAGAGCACGGACCCTAACCCGAATGCCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RTFAPSARPDHFTLS*RRRRARTLTRMPLQ
Trigger: CTGCAGCGGCATTCGGGTTAGGGTCCGTGCTCTCCGCCTGCGCCAGGACAGGGTGAAGTGGTCGGGGCGAGCAGAGGGTGCGAAGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLASRR*SAGCCA
Trigger: AGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGELASRR*SAGCCA
Trigger: AGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHLASRR*SAGCCA
Trigger: AGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCTTCCACGAGAGATCTaGCTCGCCGCGTCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLPREI*LAASWR
Trigger: ACGCCAGGACGCGGCGAGCAAGATCTCTCGTGGAAG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTTCCACGAGAGATCTaGCTCGCCGCGTCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLPREI*LAASWR
Trigger: ACGCCAGGACGCGGCGAGCAAGATCTCTCGTGGAAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAGTTGGATAATGACCTaGCTCGCCGCGTCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILSWIMT*LAASWR
Trigger: ACGCCAGGACGCGGCGAGCAAGGTCATTATCCAACT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS TCA 90 bp GATCGGTTACGAAGTATTGCAGCAACCAATTCCCCTCTATGCAGATaGTCCATCACCTCTAAAAGTTGGATAATGACCTTGCTCGCCGCG +
Preference number: 5 (lower is better)
Translates to: DRLRSIAATNSPLCR*SITSKSWIMTLLAA
Trigger: CGCGGCGAGCAAGGTCATTATCCAACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS CCA 90 bp TTCCTCCTGTGCAAGCTCTGGCCACACAAATCAAGAATGCCATTATaGGAAAAGCCCGTTTCAAAAATTCCAGTCCCTCTGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FLLCKLWPHKSRMPL*EKPVSKIPVPLLSS
Trigger: GCTGGAAAGCAGAGGGACTGGAATTTTTGAAACGGGCTTTTCCCATAATGGCATTCTTGATTTGTGTGGCCAGAGCTTGCACAGGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS TCA 90 bp GTCTTCCTCTTCCACGAGAGATATGTATGCTGGAGAAAGTGGAGTTaGCCTGGATGTTTTAAGCACAGGAACTGGGAATTTCCAGATAGC +
Preference number: 5 (lower is better)
Translates to: VFLFHERYVCWRKWS*PGCFKHRNWEFPDS
Trigger: GCTATCTGGAAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCCACTTTCTCCAGCATACATATCTCTCGTGGAAGAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTATTAACATGGCAGCAATaGGGGTCCACTGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILLTWQQ*GSTGQG
Trigger: TCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAA...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTTTAACATGGCAGCAATaGGGGTCCACTGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCLTWQQ*GSTGQG
Trigger: TCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAA...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGCAGGCTGCCTCCCTTaGACATCTTACAGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILAGCLP*TSYSQR
Trigger: TCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTGC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGCATACAGATATCCTTaGAGGGCACTTAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCAYRYP*RALRWK
Trigger: CTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGCATACAGATATCCTTaGAGGGCACTTAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILAYRYP*RALRWK
Trigger: CTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGCCTTCTGGATCCATTaGTCAGTATCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCAFWIH*SVSGSK
Trigger: CTTTGACCCTGATACTGACAAATGGATCCAGAAGGC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGCCTTCTGGATCCATTaGTCAGTATCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILAFWIH*SVSGSK
Trigger: CTTTGACCCTGATACTGACAAATGGATCCAGAAGGC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTTAACATGGCAGCAATaGGGGTCCACTGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLTWQQ*GSTGQG
Trigger: TCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTATTG +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILGSSCE*ATFCVL
Trigger: CAATACACAAAAGGTTGCCAACTCGCATGAGCTACC...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTATTG +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCGSSCE*ATFCVL
Trigger: CAATACACAAAAGGTTGCCAACTCGCATGAGCTACC...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTACAGAACTGTGGGTATaGCTGGTAAAGATGCGTGTA +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCTELWV*LVKMRV
Trigger: TACACGCATCTTTACCAGCAATACCCACAGTTCTGT...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATGCCTTCTGGATCCATTaGTCAGTATCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNAFWIH*SVSGSK
Trigger: CTTTGACCCTGATACTGACAAATGGATCCAGAAGGC...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATATCGGTTACGAAGTATaGCAGCAACCAATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNIGYEV*QQPIPL
Trigger: GAGGGGAATTGGTTGCTGCAATACTTCGTAACCGAT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACATTTCAATGGCATGTaGTCACCACGGTACTACAAT +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILHFNGM*SPRYYN
Trigger: ATTGTAGTACCGTGGTGACAACATGCCATTGAAATG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATACAGAACTGTGGGTATaGCTGGTAAAGATGCGTGTA +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNTELWV*LVKMRV
Trigger: TACACGCATCTTTACCAGCAATACCCACAGTTCTGT...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCATGAAATCCACCGTTaGCACGTAATTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHEIHR*HVINEL
Trigger: GAGCTCATTAATTACGTGCAAACGGTGGATTTCATG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACATGAAATCCACCGTTaGCACGTAATTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILHEIHR*HVINEL
Trigger: GAGCTCATTAATTACGTGCAAACGGTGGATTTCATG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCGAGTTGGCAACCTTTaGTGTATTGTTTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCRVGNL*CIVSCS
Trigger: TGAACAGGAAACAATACACAAAAGGTTGCCAACTCG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTACGAGTTGGCAACCTTTaGTGTATTGTTTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILRVGNL*CIVSCS
Trigger: TGAACAGGAAACAATACACAAAAGGTTGCCAACTCG...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CTTTATGAAAAGAGGGAGGTAGCTCATGCGAGTTGGCAACCTTTTGTGTATTGTCACTTATTAAAGTGGTaGGCCCAGGGTTTGAATCTA +
Preference number: 5 (lower is better)
Translates to: LYEKREVAHASWQPFVYCHLLKW*AQGLNL
Trigger: TAGATTCAAACCCTGGGCCAACCACTTTAATAAGTG...ACAATACACAAAAGGTTGCCAACTCGCATGAGCTACCTCCCTCTTTTCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CAA 90 bp AACCTTTTGTGTATTGTTTCCTGTTCAAGCAGGCTGCCTCCCTTTGACATCTTAAAGCTTGCAATACCATaGTTCTACCTTAACAGGGAT +
Preference number: 5 (lower is better)
Translates to: NLLCIVSCSSRLPPFDILKLAIP*FYLNRD
Trigger: ATCCCTGTTAAGGTAGAACAATGGTATTGCAAGCTT...TAAGATGTCAAAGGGAGGCAGCCTGCTTGAACAGGAAACAATACACAAAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCATGAAATCCACCGTTaGCACGTAATTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNHEIHR*HVINEL
Trigger: GAGCTCATTAATTACGTGCAAACGGTGGATTTCATG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATTAACATGGCAGCAATaGGGGTCCACTGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGELTWQQ*GSTGQG
Trigger: TCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGCAGGCTGCCTCCCTTaGACATCTTACAGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGEAGCLP*TSYSQR
Trigger: TCTTTGACTGTAAGATGTCAAAGGGAGGCAGCCTGC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCGAGTTGGCAACCTTTaGTGTATTGTTTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNRVGNL*CIVSCS
Trigger: TGAACAGGAAACAATACACAAAAGGTTGCCAACTCG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS TCA 90 bp GAATATAAACTGCTTCAGAACTCTGCAGGTTCTTCTAGTAGCTTCTaGTTCAAGTTGCTCTCCTTTCCCTATTCTTATTTCCAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: EYKLLQNSAGSSSSF*FKLLSFPYSYFQAE
Trigger: CTCAGCTTGGAAATAAGAATAGGGAAAGGAGAGCAACTTGAATCAGAAGCTACTAGAAGAACCTGCAGAGTTCTGAAGCAGTTTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTACTCAGAATACACTaGTCATCCTCTGAACAATCT +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLLRIH*SSSEQS
Trigger: AGATTGTTCAGAGGATGACAAGTGTATTCTGAGTAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGCATACAGATATCCTTaGAGGGCACTTAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGEAYRYP*RALRWK
Trigger: CTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATGCCTTCTGGATCCATTaGTCAGTATCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHAFWIH*SVSGSK
Trigger: CTTTGACCCTGATACTGACAAATGGATCCAGAAGGC...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGCCTTCTGGATCCATTaGTCAGTATCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGEAFWIH*SVSGSK
Trigger: CTTTGACCCTGATACTGACAAATGGATCCAGAAGGC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAAGGTAGCTCATGCGAGTaGGCAACCTTTTGTGTATTG +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGEGSSCE*ATFCVL
Trigger: CAATACACAAAAGGTTGCCAACTCGCATGAGCTACC...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTACTAATTTCTGCTTaGGTAACAGTACATGCCATG +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLLISA*VTVHAM
Trigger: CATGGCATGTACTGTTACCAAAGCAGAAATTAGTAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATCTCTCACTTACCAGTTaGGGATTGTTTAATAGCTAC +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNLSLTS*GLFNSY
Trigger: GTAGCTATTAAACAATCCCAAACTGGTAAGTGAGAG...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATATCGGTTACGAAGTATaGCAGCAACCAATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHIGYEV*QQPIPL
Trigger: GAGGGGAATTGGTTGCTGCAATACTTCGTAACCGAT...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS-3UTR CAA 90 bp TTGTGTTCTCAATGCACCCACACAGTCAAGTGGGTTGACAGATATGTCAAAAATTCCTTAGAAGAGATCTaGTGTTTCTCCATAGGTATA +
Preference number: 5 (lower is better)
Translates to: LCSQCTHTVKWVDRYVKNSLEEI*CFSIGI
Trigger: TATACCTATGGAGAAACACAAGATCTCTTCTAAGGA...ATTTTTGACATATCTGTCAACCCACTTGACTGTGTGGGTGCATTGAGAACACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS TCA 90 bp CTTCTGATTCAAGTTGCTCTCCTTTCCCTATTCTTATTTCCAAGCTaGGATGAGCAAAATCTCACACATTTACAACATGCTGTAGTAACA +
Preference number: 5 (lower is better)
Translates to: LLIQVALLSLFLFPS*DEQNLTHLQHAVVT
Trigger: TGTTACTACAGCATGTTGTAAATGTGTGAGATTTTGCTCATCTCAGCTTGGAAATAAGAATAGGGAAAGGAGAGCAACTTGAATCAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp CCTTATCCACCTAAATTCTGTATGGTTCTACATATATGCATTCAGTATGTGCATCATGAAATCCACCGTTaGCACGTAATTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: PYPPKFCMVLHICIQYVHHEIHR*HVINEL
Trigger: GAGCTCATTAATTACGTGCAAACGGTGGATTTCATG...ATGCACATACTGAATGCATATATGTAGAACCATACAGAATTTAGGTGGATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACATGAAATCCACCGTTaGCACGTAATTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGEHEIHR*HVINEL
Trigger: GAGCTCATTAATTACGTGCAAACGGTGGATTTCATG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAACGAGTTGGCAACCTTTaGTGTATTGTTTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGERVGNL*CIVSCS
Trigger: TGAACAGGAAACAATACACAAAAGGTTGCCAACTCG...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATCATTTGTCATGTTCTaGTGGATCCCTCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGESFVMF*WIPLSS
Trigger: TGATGAGAGAGGGATCCACAAGAACATGACAAATGA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469946.5
CDS TCA 90 bp GATTCAAGTTGCTCTCCTTTCCCTATTCTTATTTCCAAGCTGAGATaGGCAAAATCTCACACATTTACAACATGCTGTAGTAACACAAAT +
Preference number: 5 (lower is better)
Translates to: DSSCSPFPILISKLR*AKSHTFTTCCSNTN
Trigger: ATTTGTGTTACTACAGCATGTTGTAAATGTGTGAGATTTTGCTCATCTCAGCTTGGAAATAAGAATAGGGAAAGGAGAGCAACTTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS-3UTR CAA 90 bp ATCTGTATCAATTACCAGAGGGTAATCCTAACATATATACTACTTAAGGGGGAATTGAACTCTCATCATTaGTCATGTTCTTGTGGATCC +
Preference number: 5 (lower is better)
Translates to: ICINYQRVILTYILLKGELNSHH*SCSCGS
Trigger: GGATCCACAAGAACATGACAAATGATGAGAGTTCAA...TTCCCCCTTAAGTAGTATATATGTTAGGATTACCCTCTGGTAATTGATACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469946.5
CDS GCA 72 bp CGCGTCCTGGCGTCCCGCCGCTTGTCCGCCGGGTGCTaGGCTCCGAGGGCCAAAGAGGGAGTCGCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: RVLASRRLSAGC*APRAKEGVARR
Trigger: GCGCCGCGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS GCA 72 bp AAGAGGGAGTCGCGCGGCGCAGCCGGGGCTCCCTCCTaGTGCGAGGCACCAGCACCCGCACCTTCGCACCCT +
Preference number: 6 (lower is better)
Translates to: KRESRGAAGAPS*CEAPAPAPSHP
Trigger: AGGGTGCGAAGGTGCGGGTGCTGGTGCCTCGCAGCAGGAGGGAGCCCCGGCTGCGCCGCGCGACTCCCTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS GCA 72 bp GCTGCGAGGCACCAGCACCCGCACCTTCGCACCCTCTaGTCGCCCCGACCACTTCACCCTGTCCTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: AARHQHPHLRTL*SPRPLHPVLAQ
Trigger: CTGCGCCAGGACAGGGTGAAGTGGTCGGGGCGAGCAGAGGGTGCGAAGGTGCGGGTGCTGGTGCCTCGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371882.5
ENST00000540167.5
ENST00000545703.5
CDS CAA 72 bp AGAGATCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCTCCGAGGGCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: RDLARRVLASRR*SAGCCAPRAKE
Trigger: CTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGATCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS CAA 72 bp AATGACCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCTCCGAGGGCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: NDLARRVLASRR*SAGCCAPRAKE
Trigger: CTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGGTCATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS CAA 90 bp TCTTCCACGAGAGATCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCTCCGAGGGCCAAAGAGGGAGTCGCG +
Preference number: 6 (lower is better)
Translates to: SSTRDLARRVLASRR*SAGCCAPRAKEGVA
Trigger: CGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGATCTCTCGTGGAAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS CCA 72 bp CTTCCTCTTCCACGAGAGATCTTGCTCGCCGCGTCCTaGCGTCCCGCCGCTTGTCCGCCGGGTGCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: LPLPREILLAAS*RPAACPPGAAL
Trigger: GAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGATCTCTCGTGGAAGAGGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371882.5
ENST00000545703.5
CDS CAA 90 bp AAGTTGGATAATGACCTTGCTCGCCGCGTCCTGGCGTCCCGCCGCTaGTCCGCCGGGTGCTGCGCTCCGAGGGCCAAAGAGGGAGTCGCG +
Preference number: 6 (lower is better)
Translates to: KLDNDLARRVLASRR*SAGCCAPRAKEGVA
Trigger: CGCGACTCCCTCTTTGGCCCTCGGAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGGTCATTATCCAACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS CCA 72 bp TCTAAAAGTTGGATAATGACCTTGCTCGCCGCGTCCTaGCGTCCCGCCGCTTGTCCGCCGGGTGCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: SKSWIMTLLAAS*RPAACPPGAAL
Trigger: GAGCGCAGCACCCGGCGGACAAGCGGCGGGACGCCAGGACGCGGCGAGCAAGGTCATTATCCAACTTTTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS CCA 72 bp CTAAGACTTCCATTCCACACTGTACTGACACAGCAGTaGCTGCCGCGGAGAACAAGCAAAGGATTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LRLPFHTVLTQQ*LPRRTSKGFCQ
Trigger: CTGGCAGAATCCTTTGCTTGTTCTCCGCGGCAGCCACTGCTGTGTCAGTACAGTGTGGAATGGAAGTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS CAA 72 bp TGGTCAAAGCCCTGTAACACCACAGAACTGTGGGTATaGCTGGTAAAGATGCGTGTAGGTCCTGCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: WSKPCNTTELWV*LVKMRVGPALE
Trigger: TTCCAAGGCAGGACCTACACGCATCTTTACCAGCAATACCCACAGTTCTGTGGTGTTACAGGGCTTTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262820.7
ENST00000371876.5
ENST00000371878.5
ENST00000371882.5
ENST00000453826.1
ENST00000469946.5
ENST00000540167.5
ENST00000541812.5
ENST00000545703.5
CDS CAA 72 bp GGTCTTCCTCTTCCACGAGAGATCGGTTACGAAGTATaGCAGCAACCAATTCCCCTCTATGCAGATGATCCA +
Preference number: 6 (lower is better)
Translates to: GLPLPREIGYEV*QQPIPLYADDP
Trigger: TGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGATCTCTCGTGGAAGAGGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS CAA 90 bp CGGCTTGTTTTAATGACAATTGCCTCCGTCTCCGGTTACGAAGTATaGCAGCAACCAATTCCCCTCTATGCAGATGATCCATCACCTCTA +
Preference number: 6 (lower is better)
Translates to: RLVLMTIASVSGYEV*QQPIPLYADDPSPL
Trigger: TAGAGGTGATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGGAGACGGAGGCAATTGTCATTAAAACAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453826.1
CDS GCA 72 bp GTCTTCCTCTTCCACGAGAGATCGGTTACGAAGTATTaGAGCAACCAATTCCCCTCTATGCAGATGATCCAT +
Preference number: 6 (lower is better)
Translates to: VFLFHERSVTKY*SNQFPSMQMIH
Trigger: ATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGATCTCTCGTGGAAGAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540167.5
ENST00000541812.5
CDS GCA 72 bp TCCTCCTGTGCAAGCTCTGGCCACACAAATCAAGAATaGCATTATGGGAAAAGCCCGTTTCAAAAATTCCAG +
Preference number: 6 (lower is better)
Translates to: SSCASSGHTNQE*HYGKSPFQKFQ
Trigger: CTGGAATTTTTGAAACGGGCTTTTCCCATAATGGCATTCTTGATTTGTGTGGCCAGAGCTTGCACAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS CCA 72 bp TGCAAGCTCTGGCCACACAAATCAAGAATGCCATTATaGGAAAAGCCCGTTTCAAAAATTCCAGTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: CKLWPHKSRMPL*EKPVSKIPVPL
Trigger: CAGAGGGACTGGAATTTTTGAAACGGGCTTTTCCCATAATGGCATTCTTGATTTGTGTGGCCAGAGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262820.7
ENST00000371878.5
CDS CAA 72 bp TTAATGACAATTGCCTCCGTCTCCGGTTACGAAGTATaGCAGCAACCAATTCCCCTCTATGCAGATGATCCA +
Preference number: 6 (lower is better)
Translates to: LMTIASVSGYEV*QQPIPLYADDP
Trigger: TGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCGTAACCGGAGACGGAGGCAATTGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453826.1
CDS TCA 72 bp TTCCACGAGAGATATGTATGCTGGAGAAAGTGGAGTTaGCCTGGATGTTTTAAGCACAGGAACTGGGAATTT +
Preference number: 6 (lower is better)
Translates to: FHERYVCWRKWS*PGCFKHRNWEF
Trigger: AAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCCACTTTCTCCAGCATACATATCTCTCGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS TCA 72 bp AAGTGGTTGGCCCAGGGTTTGAATCTAGGTCTAGTCTaGTTCCCACTCCAAACCCCCATTAATAAAAGTAAA +
Preference number: 6 (lower is better)
Translates to: KWLAQGLNLGLV*FPLQTPINKSK
Trigger: TTTACTTTTATTAATGGGGGTTTGGAGTGGGAATCAGACTAGACCTAGATTCAAACCCTGGGCCAACCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS TCA 72 bp CGAAGTATTGCAGCAACCAATTCCCCTCTATGCAGATaGTCCATCACCTCTAAAAGTTGGATAATGACCTTG +
Preference number: 6 (lower is better)
Translates to: RSIAATNSPLCR*SITSKSWIMTL
Trigger: CAAGGTCATTATCCAACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540167.5
CDS TCA 72 bp CGAAGTATTGCAGCAACCAATTCCCCTCTATGCAGATaGTCCATCACCTCTAAAAGTTGGATAATGACCTCA +
Preference number: 6 (lower is better)
Translates to: RSIAATNSPLCR*SITSKSWIMTS
Trigger: TGAGGTCATTATCCAACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541812.5
CDS CAA 72 bp ATAGCAGGAGAGCTCGTTTTCCATTTCAATGGCATGTaGTCACCACGGTACTACAATAACAGTAAAGAGCGT +
Preference number: 6 (lower is better)
Translates to: IAGELVFHFNGM*SPRYYNNSKER
Trigger: ACGCTCTTTACTGTTATTGTAGTACCGTGGTGACAACATGCCATTGAAATGGAAAACGAGCTCTCCTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS TCA 72 bp CTGCTTCAGAACTCTGCAGGTTCTTCTAGTAGCTTCTaGTTCAAGTTGCTCTCCTTTCCCTATTCTTATTTC +
Preference number: 6 (lower is better)
Translates to: LLQNSAGSSSSF*FKLLSFPYSYF
Trigger: GAAATAAGAATAGGGAAAGGAGAGCAACTTGAATCAGAAGCTACTAGAAGAACCTGCAGAGTTCTGAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS GCA 72 bp AATATATCCTTGAAATCGGCTTGTTTTAATGACAATTaGCTCCGTCTCCGGTTACGAAGTATTGCAGCAACC +
Preference number: 6 (lower is better)
Translates to: NISLKSACFNDN*LRLRLRSIAAT
Trigger: GGTTGCTGCAATACTTCGTAACCGGAGACGGAGGCAATTGTCATTAAAACAAGCCGATTTCAAGGATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453826.1
CDS CAA 72 bp TTATTGATTGAATGTGAAGAGCACTGTTCTTCAACATaGCAAGGAGGTAACACTTCTCTGCAAACCCCAAGC +
Preference number: 6 (lower is better)
Translates to: LLIECEEHCSST*QGGNTSLQTPS
Trigger: GCTTGGGGTTTGCAGAGAAGTGTTACCTCCTTGCAATGTTGAAGAACAGTGCTCTTCACATTCAATCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS CAA 90 bp AATTTCCAGATAGCAGGAGAGCTCGTTTTCCATTTCAATGGCATGTaGTCACCACGGTACTACAATAACAGTAAAGAGCGTTTCCATAAC +
Preference number: 6 (lower is better)
Translates to: NFQIAGELVFHFNGM*SPRYYNNSKERFHN
Trigger: GTTATGGAAACGCTCTTTACTGTTATTGTAGTACCGTGGTGACAACATGCCATTGAAATGGAAAACGAGCTCTCCTGCTATCTGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS GCA 72 bp ACTGTTCTTCAACATTGCAAGGAGGTAACACTTCTCTaGAAACCCCAAGCCACAATTATATCAATCTATGCT +
Preference number: 6 (lower is better)
Translates to: TVLQHCKEVTLL*KPQATIISIYA
Trigger: AGCATAGATTGATATAATTGTGGCTTGGGGTTTGCAGAGAAGTGTTACCTCCTTGCAATGTTGAAGAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS TCA 72 bp CAAGTTGCTCTCCTTTCCCTATTCTTATTTCCAAGCTaGGATGAGCAAAATCTCACACATTTACAACATGCT +
Preference number: 6 (lower is better)
Translates to: QVALLSLFLFPS*DEQNLTHLQHA
Trigger: AGCATGTTGTAAATGTGTGAGATTTTGCTCATCTCAGCTTGGAAATAAGAATAGGGAAAGGAGAGCAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262820.7
CDS GCA 72 bp ACACTCCCTACTAATTTCTGCTTTGGTAACAGTACATaGCATGTTAACCTTCTTAGCAGATTCAATATTCCC +
Preference number: 6 (lower is better)
Translates to: TLPTNFCFGNST*HVNLLSRFNIP
Trigger: GGGAATATTGAATCTGCTAAGAAGGTTAACATGGCATGTACTGTTACCAAAGCAGAAATTAGTAGGGAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS GCA 72 bp ATTCAAGCAGACTGTTTTATTAGTTTCTGTATTCCCTaGACAGAGCCTAGCACGAAAGACTTAATATATGTC +
Preference number: 6 (lower is better)
Translates to: IQADCFISFCIP*TEPSTKDLIYV
Trigger: GACATATATTAAGTCTTTCGTGCTAGGCTCTGTGCAGGGAATACAGAAACTAATAAAACAGTCTGCTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS CAA 90 bp TTATTAAGTTTATTGATTGAATGTGAAGAGCACTGTTCTTCAACATaGCAAGGAGGTAACACTTCTCTGCAAACCCCAAGCCACAATTAT +
Preference number: 6 (lower is better)
Translates to: LLSLLIECEEHCSST*QGGNTSLQTPSHNY
Trigger: ATAATTGTGGCTTGGGGTTTGCAGAGAAGTGTTACCTCCTTGCAATGTTGAAGAACAGTGCTCTTCACATTCAATCAATAAACTTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5
CDS CAA 90 bp TTAGCAGATTCAATATTCCCATCTATCTCCCCTTTATTAAGTTTATaGATTGAATGTGAAGAGCACTGTTCTTCAACATTGCAAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LADSIFPSISPLLSL*IECEEHCSSTLQGG
Trigger: ACCTCCTTGCAATGTTGAAGAACAGTGCTCTTCACATTCAATCAATAAACTTAATAAAGGGGAGATAGATGGGAATATTGAATCTGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371876.5