RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL10 (Homo sapiens)

Ensembl gene IDs: ENSG00000161594

Ensembl transcript IDs: ENST00000293303.5, ENST00000438813.1, ENST00000448203.2, ENST00000485613.1

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCGGCTGGAGAGGCTTCCTGCCCATTGGGCCTTCCCGCTTTGCTCTaGCGCGGACCCCTCCTAGCTCTCTGCCCCAAGAAATGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: AAGEASCPLGLPALL*RGPLLALCPKKWPG
Trigger: TCCCGGCCATTTCTTGGGGCAGAGAGCTAGGAGGGGTCCGCGGCAGAGCAAAGCGGGAAGGCCCAATGGGCAGGAAGCCTCTCCAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS CCA 90 bp GAGGCTGGTGGAAACGTGTGGAGGCCGCCGCGCTCTCCATCTCCATaGCACCCTGGGACAGCGGAGAGAGGCTGCTTTCCTAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: EAGGNVWRPPRSPSP*HPGTAERGCFPRVS
Trigger: CGACACCCTAGGAAAGCAGCCTCTCTCCGCTGTCCCAGGGTGCCATGGAGATGGAGAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS CCA 90 bp CCATCGCACTCATCTTCCTCTCCATGTGAGGCTGGTGGAAACGTGTaGAGGCCGCCGCGCTCTCCATCTCCATGGCACCCTGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: PSHSSSSPCEAGGNV*RPPRSPSPWHPGTA
Trigger: CGCTGTCCCAGGGTGCCATGGAGATGGAGAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTCACATGGAGAGGAAGATGAGTGCGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS CCA 90 bp CCATCGCACTCATCTTCCTCTCCATGTGAGGCTGGTGGAAACGTGTaGAGGCCGCCGCGCTCTCCATCTCCATGGCACCCTGATACAGGT +
Preference number: 5 (lower is better)
Translates to: PSHSSSSPCEAGGNV*RPPRSPSPWHPDTG
Trigger: ACCTGTATCAGGGTGCCATGGAGATGGAGAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTCACATGGAGAGGAAGATGAGTGCGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS TCA 90 bp TCGTTGAAGATCTCACAGGCCATCGCACTCATCTTCCTCTCCATGTaGGGCTGGTGGAAACGTGTGGAGGCCGCCGCGCTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: SLKISQAIALIFLSM*GWWKRVEAAALSIS
Trigger: GGAGATGGAGAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTCACATGGAGAGGAAGATGAGTGCGATGGCCTGTGAGATCTTCAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS GCA 90 bp TGCCTCAATGGCATTGGTGGGGCTCCCACCACTCCAGCCACCAATTaGAAAGAGGATGGCATAGGGCAAGCGTGGTCTGGTGAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: CLNGIGGAPTTPATN*KEDGIGQAWSGEWV
Trigger: AACCCACTCACCAGACCACGCTTGCCCTATGCCATCCTCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 90 bp GGCACGGGGACTCTCTTCCTCACAAGTAACATTCACCCATCTGTCTaGCCGAGCGTCATATGCCTCAATGGCATTGGTGGGGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: GTGTLFLTSNIHPSV*PSVICLNGIGGAPT
Trigger: GGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATGTTACTTGTGAGGAAGAGAGTCCCCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 90 bp TCACCCATCTGTCTGCCCGAGCGTCATATGCCTCAATGGCATTGGTaGGGCTCCCACCACTCCAGCCACCAATTGCAAAGAGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: SPICLPERHMPQWHW*GSHHSSHQLQRGWH
Trigger: ATGCCATCCTCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 90 bp CATTCACCCATCTGTCTGCCCGAGCGTCATATGCCTCAATGGCATTaGTGGGGCTCCCACCACTCCAGCCACCAATTGCAAAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: HSPICLPERHMPQWH*WGSHHSSHQLQRGW
Trigger: CCATCCTCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 90 bp TTCCTCACAAGTAACATTCACCCATCTGTCTGCCCGAGCGTCATATaGCTCAATGGCATTGGTGGGGCTCCCACCACTCCAGCCACCAAT +
Preference number: 5 (lower is better)
Translates to: FLTSNIHPSVCPSVI*LNGIGGAPTTPATN
Trigger: ATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATGTTACTTGTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 90 bp GTGTTGTGGCGCTTGCATCACTCCTCTGTTCGTGCATGGGGGCGATaGGTGTCCATTGATTGGTCTCTGGCTCATAACGTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: VLWRLHHSSVRAWGR*VSIDWSLAHNVQQC
Trigger: ACACTGCTGAACGTTATGAGCCAGAGACCAATCAATGGACACTCATCGCCCCCATGCACGAACAGAGGAGTGATGCAAGCGCCACAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 90 bp GAACTCGCAGCAACCCCTGACGATACCCATGATGTTAAACTGGTCTaGAGCAGCAAGCAGTTTCTCCACATTGTCCGGTGTGATAGGCAC +
Preference number: 5 (lower is better)
Translates to: ELAATPDDTHDVKLV*SSKQFLHIVRCDRH
Trigger: GTGCCTATCACACCGGACAATGTGGAGAAACTGCTTGCTGCTGCAGACCAGTTTAACATCATGGGTATCGTCAGGGGTTGCTGCGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS GCA 90 bp AAACCCACCACATATGTAGACCTTCCCATAAAGTGTTGTGGCGCTTaGATCACTCCTCTGTTCGTGCATGGGGGCGATGAGTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: KPTTYVDLPIKCCGA*ITPLFVHGGDECPL
Trigger: CAATGGACACTCATCGCCCCCATGCACGAACAGAGGAGTGATGCAAGCGCCACAACACTTTATGGGAAGGTCTACATATGTGGTGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 90 bp CCTCAACATTGGCCAGCCCTGGTACTACACAGCAGCTCAGAGCACTaGGGTATATACTCATGTCATGAGCATCATACCACTCATCGGTCT +
Preference number: 5 (lower is better)
Translates to: PQHWPALVLHSSSEH*GIYSCHEHHTTHRS
Trigger: AGACCGATGAGTGGTATGATGCTCATGACATGAGTATATACCGCAGTGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCAATGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 90 bp ACCACTCCAGCCACCAATTGCAAAGAGGATGGCATAGGGCAAGCGTaGTCTGGTGAGTGGGTTGGTGAAATCAGAATTAGAGGGTCCATT +
Preference number: 5 (lower is better)
Translates to: TTPATNCKEDGIGQA*SGEWVGEIRIRGSI
Trigger: AATGGACCCTCTAATTCTGATTTCACCAACCCACTCACCAGACCACGCTTGCCCTATGCCATCCTCTTTGCAATTGGTGGCTGGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 90 bp GAAGTTGTCCCGTCTAGCTGCATATTCCTCAACATTGGCCAGCCCTaGTACTACACAGCAGCTCAGAGCACTGCGGTATATACTCATGTC +
Preference number: 5 (lower is better)
Translates to: EVVPSSCIFLNIGQP*YYTAAQSTAVYTHV
Trigger: GACATGAGTATATACCGCAGTGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCAATGTTGAGGAATATGCAGCTAGACGGGACAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 90 bp TTGAGGAACTCGCAGCAACCCCTGACGATACCCATGATGTTAAACTaGTCTGCAGCAGCAAGCAGTTTCTCCACATTGTCCGGTGTGATA +
Preference number: 5 (lower is better)
Translates to: LRNSQQPLTIPMMLN*SAAASSFSTLSGVI
Trigger: TATCACACCGGACAATGTGGAGAAACTGCTTGCTGCTGCAGACCAGTTTAACATCATGGGTATCGTCAGGGGTTGCTGCGAGTTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS CCA 90 bp GTCTCTATCCCTGGAGCATTCATCTACCTTCCACAGCCCAACACTTaGCTCCCTAGACACCGAACTCAAGGAAATCCAAGTCAATTGAGG +
Preference number: 5 (lower is better)
Translates to: VSIPGAFIYLPQPNT*LPRHRTQGNPSQLR
Trigger: CCTCAATTGACTTGGATTTCCTTGAGTTCGGTGTCTAGGGAGCCAAGTGTTGGGCTGTGGAAGGTAGATGAATGCTCCAGGGATAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS TCA 90 bp GTCCGTGAACTTACAGATGCCGATACAATTATCCAAGCACAGCTCTaGCTTGAGGAACTCGCAGCAACCCCTGACGATACCCATGATGTT +
Preference number: 5 (lower is better)
Translates to: VRELTDADTIIQAQL*LEELAATPDDTHDV
Trigger: AACATCATGGGTATCGTCAGGGGTTGCTGCGAGTTCCTCAAGTCAGAGCTGTGCTTGGATAATTGTATCGGCATCTGTAAGTTCACGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS CCA 90 bp ACCAATTGCAAAGAGGATGGCATAGGGCAAGCGTGGTCTGGTGAGTaGGTTGGTGAAATCAGAATTAGAGGGTCCATTCATGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TNCKEDGIGQAWSGE*VGEIRIRGSIHVEV
Trigger: GACCTCAACATGAATGGACCCTCTAATTCTGATTTCACCAACCCACTCACCAGACCACGCTTGCCCTATGCCATCCTCTTTGCAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 90 bp ACATGTAGGCCTTCTGCCTCAGCTCAGGACAGTAGTAGTAGTCCGTaGACTTACAGATGCCGATACAATTATCCAAGCACAGCTCTGACT +
Preference number: 5 (lower is better)
Translates to: TCRPSASAQDSSSSP*TYRCRYNYPSTALT
Trigger: AGTCAGAGCTGTGCTTGGATAATTGTATCGGCATCTGTAAGTTCACGGACTACTACTACTGTCCTGAGCTGAGGCAGAAGGCCTACATGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000485613.1
CDS TCA 90 bp CCTATTCCACTCCTCCTGCTTCTCATGGGTGCTATGACTGTCCACTaGTTACTTTCAGTGTTATACACTTCTGCTGTGAACAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: PIPLLLLLMGAMTVH*LLSVLYTSAVNRHS
Trigger: CGAGTGCCTGTTCACAGCAGAAGTGTATAACACTGAAAGTAATCAGTGGACAGTCATAGCACCCATGAGAAGCAGGAGGAGTGGAATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 90 bp AAAATTCTGCCGAGACTTTCACCATCTCCTCAAAGTTGTGCAGTATaGACATGTAGGCCTTCTGCCTCAGCTCAGGACAGTAGTAGTAGT +
Preference number: 5 (lower is better)
Translates to: KILPRLSPSPQSCAV*TCRPSASAQDSSSS
Trigger: ACTACTACTACTGTCCTGAGCTGAGGCAGAAGGCCTACATGTTCATACTGCACAACTTTGAGGAGATGGTGAAAGTCTCGGCAGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 90 bp GGGTGCTATGACTGTCCACTGATTACTTTCAGTGTTATACACTTCTaGTGTGAACAGGCACTCGTTTCCATTAAACCCACCACATATGTA +
Preference number: 5 (lower is better)
Translates to: GCYDCPLITFSVIHF*CEQALVSIKPTTYV
Trigger: TACATATGTGGTGGGTTTAATGGAAACGAGTGCCTGTTCACAGCAGAAGTGTATAACACTGAAAGTAATCAGTGGACAGTCATAGCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp CCGGGCTGGGGGCGGCTGGAGAGGCTTCCTGCCCATTaGGCCTTCCCGCTTTGCTCTGCCGCGGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: PGWGRLERLPAH*AFPLCSAADPS
Trigger: GGAGGGGTCCGCGGCAGAGCAAAGCGGGAAGGCCCAATGGGCAGGAAGCCTCTCCAGCCGCCCCCAGCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS CAA 72 bp GCTGGAGAGGCTTCCTGCCCATTGGGCCTTCCCGCTTaGCTCTGCCGCGGACCCCTCCTAGCTCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AGEASCPLGLPA*LCRGPLLALCP
Trigger: GGGGCAGAGAGCTAGGAGGGGTCCGCGGCAGAGCAAAGCGGGAAGGCCCAATGGGCAGGAAGCCTCTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS GCA 72 bp GAGGCTTCCTGCCCATTGGGCCTTCCCGCTTTGCTCTaGCGCGGACCCCTCCTAGCTCTCTGCCCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: EASCPLGLPALL*RGPLLALCPKK
Trigger: TTTCTTGGGGCAGAGAGCTAGGAGGGGTCCGCGGCAGAGCAAAGCGGGAAGGCCCAATGGGCAGGAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS TCA 72 bp ATCTCACAGGCCATCGCACTCATCTTCCTCTCCATGTaGGGCTGGTGGAAACGTGTGGAGGCCGCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: ISQAIALIFLSM*GWWKRVEAAAL
Trigger: GAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTCACATGGAGAGGAAGATGAGTGCGATGGCCTGTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS CCA 72 bp TCATCTTCCTCTCCATGTGAGGCTGGTGGAAACGTGTaGAGGCCGCCGCGCTCTCCATCTCCATGGCACCCT +
Preference number: 6 (lower is better)
Translates to: SSSSPCEAGGNV*RPPRSPSPWHP
Trigger: AGGGTGCCATGGAGATGGAGAGCGCGGCGGCCTCCACACGTTTCCACCAGCCTCACATGGAGAGGAAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS CCA 72 bp TCACCCATCTGTCTGCCCGAGCGTCATATGCCTCAATaGCATTGGTGGGGCTCCCACCACTCCAGCCACCAA +
Preference number: 6 (lower is better)
Translates to: SPICLPERHMPQ*HWWGSHHSSHQ
Trigger: TTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp TGGCATTGGTGGGGCTCCCACCACTCCAGCCACCAATaGCAAAGAGGATGGCATAGGGCAAGCGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: WHWWGSHHSSHQ*QRGWHRASVVW
Trigger: CCAGACCACGCTTGCCCTATGCCATCCTCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 72 bp CTCCTAGCTCTCTGCCCCAAGAAATGGCCGGGAGCTTaGAGGAGAGCGGGTTGGTTCGCCTGTCCTAAAACC +
Preference number: 6 (lower is better)
Translates to: LLALCPKKWPGA*RRAGWFACPKT
Trigger: GGTTTTAGGACAGGCGAACCAACCCGCTCTCCTTCAAGCTCCCGGCCATTTCTTGGGGCAGAGAGCTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS CAA 72 bp CATCTGTCTGCCCGAGCGTCATATGCCTCAATGGCATaGGTGGGGCTCCCACCACTCCAGCCACCAATTGCA +
Preference number: 6 (lower is better)
Translates to: HLSARASYASMA*VGLPPLQPPIA
Trigger: TGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp TGTCTGCCCGAGCGTCATATGCCTCAATGGCATTGGTaGGGCTCCCACCACTCCAGCCACCAATTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: CLPERHMPQWHW*GSHHSSHQLQR
Trigger: TCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp ATCTGTCTGCCCGAGCGTCATATGCCTCAATGGCATTaGTGGGGCTCCCACCACTCCAGCCACCAATTGCAA +
Preference number: 6 (lower is better)
Translates to: ICLPERHMPQWH*WGSHHSSHQLQ
Trigger: TTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp ACATTCACCCATCTGTCTGCCCGAGCGTCATATGCCTCAATGGCATaGGTGGGGCTCCCACCACTCCAGCCACCAATTGCAAAGAGGATG +
Preference number: 6 (lower is better)
Translates to: TFTHLSARASYASMA*VGLPPLQPPIAKRM
Trigger: CATCCTCTTTGCAATTGGTGGCTGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 72 bp AGTAACATTCACCCATCTGTCTGCCCGAGCGTCATATaGCTCAATGGCATTGGTGGGGCTCCCACCACTCCA +
Preference number: 6 (lower is better)
Translates to: SNIHPSVCPSVI*LNGIGGAPTTP
Trigger: TGGAGTGGTGGGAGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp ACCACGTCGCAGAGCTTGCCCTCTAGTCTAAGCTCGTaGAAGATCTCACAGGCCATCGCACTCATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: TTSQSLPSSLSS*KISQAIALIFL
Trigger: GAGGAAGATGAGTGCGATGGCCTGTGAGATCTTCAACGAGCTTAGACTAGAGGGCAAGCTCTGCGACGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS CAA 72 bp GGGAAGTTGTCCCGTCTAGCTGCATATTCCTCAACATaGGCCAGCCCTGGTACTACACAGCAGCTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: GKLSRLAAYSST*ASPGTTQQLRA
Trigger: TGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCAATGTTGAGGAATATGCAGCTAGACGGGACAACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp GCTAATCCTGGGAAGTTGTCCCGTCTAGCTGCATATTCCTCAACATaGGCCAGCCCTGGTACTACACAGCAGCTCAGAGCACTGCGGTAT +
Preference number: 6 (lower is better)
Translates to: ANPGKLSRLAAYSST*ASPGTTQQLRALRY
Trigger: ATACCGCAGTGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCAATGTTGAGGAATATGCAGCTAGACGGGACAACTTCCCAGGATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 72 bp CGCTTGCATCACTCCTCTGTTCGTGCATGGGGGCGATaGGTGTCCATTGATTGGTCTCTGGCTCATAACGTT +
Preference number: 6 (lower is better)
Translates to: RLHHSSVRAWGR*VSIDWSLAHNV
Trigger: AACGTTATGAGCCAGAGACCAATCAATGGACACTCATCGCCCCCATGCACGAACAGAGGAGTGATGCAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp ACCCACCACATATGTAGACCTTCCCATAAAGTGTTGTaGCGCTTGCATCACTCCTCTGTTCGTGCATGGGGG +
Preference number: 6 (lower is better)
Translates to: THHICRPSHKVL*RLHHSSVRAWG
Trigger: CCCCCATGCACGAACAGAGGAGTGATGCAAGCGCCACAACACTTTATGGGAAGGTCTACATATGTGGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp CCGTCTAGCTGCATATTCCTCAACATTGGCCAGCCCTaGTACTACACAGCAGCTCAGAGCACTGCGGTATAT +
Preference number: 6 (lower is better)
Translates to: PSSCIFLNIGQP*YYTAAQSTAVY
Trigger: ATATACCGCAGTGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCAATGTTGAGGAATATGCAGCTAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp CCATCTCCATGGCACCCTGATACAGGTCTCTATCCCTaGAGCATTCATCTACCTTCCACAGCCCAACACTTG +
Preference number: 6 (lower is better)
Translates to: PSPWHPDTGLYP*SIHLPSTAQHL
Trigger: CAAGTGTTGGGCTGTGGAAGGTAGATGAATGCTCCAGGGATAGAGACCTGTATCAGGGTGCCATGGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448203.2
CDS CAA 90 bp GCACTGAACTCAAAGCCATTGACCTTGATGACCACGTCGCAGAGCTaGCCCTCTAGTCTAAGCTCGTTGAAGATCTCACAGGCCATCGCA +
Preference number: 6 (lower is better)
Translates to: ALNSKPLTLMTTSQS*PSSLSSLKISQAIA
Trigger: TGCGATGGCCTGTGAGATCTTCAACGAGCTTAGACTAGAGGGCAAGCTCTGCGACGTGGTCATCAAGGTCAATGGCTTTGAGTTCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000448203.2
CDS CAA 90 bp CTGCAGCTACAGAGGATGTTCTTATGGGCACTGAACTCAAAGCCATaGACCTTGATGACCACGTCGCAGAGCTTGCCCTCTAGTCTAAGC +
Preference number: 6 (lower is better)
Translates to: LQLQRMFLWALNSKP*TLMTTSQSLPSSLS
Trigger: GCTTAGACTAGAGGGCAAGCTCTGCGACGTGGTCATCAAGGTCAATGGCTTTGAGTTCAGTGCCCATAAGAACATCCTCTGTAGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000448203.2
CDS CAA 90 bp CCCATGATGTTAAACTGGTCTGCAGCAGCAAGCAGTTTCTCCACATaGTCCGGTGTGATAGGCACGGTCCGGGTGTATGCATACTCAATG +
Preference number: 6 (lower is better)
Translates to: PMMLNWSAAASSFST*SGVIGTVRVYAYSM
Trigger: CATTGAGTATGCATACACCCGGACCGTGCCTATCACACCGGACAATGTGGAGAAACTGCTTGCTGCTGCAGACCAGTTTAACATCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS GCA 72 bp GCAACCCCTGACGATACCCATGATGTTAAACTGGTCTaGAGCAGCAAGCAGTTTCTCCACATTGTCCGGTGT +
Preference number: 6 (lower is better)
Translates to: ATPDDTHDVKLV*SSKQFLHIVRC
Trigger: ACACCGGACAATGTGGAGAAACTGCTTGCTGCTGCAGACCAGTTTAACATCATGGGTATCGTCAGGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS GCA 72 bp ACATATGTAGACCTTCCCATAAAGTGTTGTGGCGCTTaGATCACTCCTCTGTTCGTGCATGGGGGCGATGAG +
Preference number: 6 (lower is better)
Translates to: TYVDLPIKCCGA*ITPLFVHGGDE
Trigger: CTCATCGCCCCCATGCACGAACAGAGGAGTGATGCAAGCGCCACAACACTTTATGGGAAGGTCTACATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS GCA 72 bp TGGCCAGCCCTGGTACTACACAGCAGCTCAGAGCACTaGGGTATATACTCATGTCATGAGCATCATACCACT +
Preference number: 6 (lower is better)
Translates to: WPALVLHSSSEH*GIYSCHEHHTT
Trigger: AGTGGTATGATGCTCATGACATGAGTATATACCGCAGTGCTCTGAGCTGCTGTGTAGTACCAGGGCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp CAGAGGATGTTCTTATGGGCACTGAACTCAAAGCCATaGACCTTGATGACCACGTCGCAGAGCTTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: QRMFLWALNSKP*TLMTTSQSLPS
Trigger: AGAGGGCAAGCTCTGCGACGTGGTCATCAAGGTCAATGGCTTTGAGTTCAGTGCCCATAAGAACATCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000448203.2
CDS CAA 72 bp CAGATGCCGATACAATTATCCAAGCACAGCTCTGACTaGAGGAACTCGCAGCAACCCCTGACGATACCCATG +
Preference number: 6 (lower is better)
Translates to: QMPIQLSKHSSD*RNSQQPLTIPM
Trigger: CATGGGTATCGTCAGGGGTTGCTGCGAGTTCCTCAAGTCAGAGCTGTGCTTGGATAATTGTATCGGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS CAA 72 bp ACTCCTCTGTTCGTGCATGGGGGCGATGAGTGTCCATaGATTGGTCTCTGGCTCATAACGTTCAGCAGTGTT +
Preference number: 6 (lower is better)
Translates to: TPLFVHGGDECP*IGLWLITFSSV
Trigger: AACACTGCTGAACGTTATGAGCCAGAGACCAATCAATGGACACTCATCGCCCCCATGCACGAACAGAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp CTACAGAGGATGTTCTTATGGGCACTGAACTCAAAGCCATTGACCTaGATGACCACGTCGCAGAGCTTGCCCTCTAGTCTAAGCTCGTTG +
Preference number: 6 (lower is better)
Translates to: LQRMFLWALNSKPLT*MTTSQSLPSSLSSL
Trigger: CAACGAGCTTAGACTAGAGGGCAAGCTCTGCGACGTGGTCATCAAGGTCAATGGCTTTGAGTTCAGTGCCCATAAGAACATCCTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000448203.2
CDS TCA 72 bp CTTACAGATGCCGATACAATTATCCAAGCACAGCTCTaGCTTGAGGAACTCGCAGCAACCCCTGACGATACC +
Preference number: 6 (lower is better)
Translates to: LTDADTIIQAQL*LEELAATPDDT
Trigger: GGTATCGTCAGGGGTTGCTGCGAGTTCCTCAAGTCAGAGCTGTGCTTGGATAATTGTATCGGCATCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS TCA 72 bp CCGAGACTTTCACCATCTCCTCAAAGTTGTGCAGTATaGACATGTAGGCCTTCTGCCTCAGCTCAGGACAGT +
Preference number: 6 (lower is better)
Translates to: PRLSPSPQSCAV*TCRPSASAQDS
Trigger: ACTGTCCTGAGCTGAGGCAGAAGGCCTACATGTTCATACTGCACAACTTTGAGGAGATGGTGAAAGTCTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp GCCACCAATTGCAAAGAGGATGGCATAGGGCAAGCGTaGTCTGGTGAGTGGGTTGGTGAAATCAGAATTAGA +
Preference number: 6 (lower is better)
Translates to: ATNCKEDGIGQA*SGEWVGEIRIR
Trigger: TCTAATTCTGATTTCACCAACCCACTCACCAGACCACGCTTGCCCTATGCCATCCTCTTTGCAATTGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp CCACCCACCACAAACAAGAGGTCATCCACCACCTCGATGCCAAAATaGCTACGAGGATTAAACATAGTGGGGATTGTGCGCCAAGTGTTA +
Preference number: 6 (lower is better)
Translates to: PPTTNKRSSTTSMPK*LRGLNIVGIVRQVL
Trigger: TAACACTTGGCGCACAATCCCCACTATGTTTAATCCTCGTAGCAATTTTGGCATCGAGGTGGTGGATGACCTCTTGTTTGTGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CCA 72 bp AAAGAGGATGGCATAGGGCAAGCGTGGTCTGGTGAGTaGGTTGGTGAAATCAGAATTAGAGGGTCCATTCAT +
Preference number: 6 (lower is better)
Translates to: KEDGIGQAWSGE*VGEIRIRGSIH
Trigger: ATGAATGGACCCTCTAATTCTGATTTCACCAACCCACTCACCAGACCACGCTTGCCCTATGCCATCCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp ATGTTCTTATGGGCACTGAACTCAAAGCCATTGACCTaGATGACCACGTCGCAGAGCTTGCCCTCTAGTCTA +
Preference number: 6 (lower is better)
Translates to: MFLWALNSKPLT*MTTSQSLPSSL
Trigger: TAGACTAGAGGGCAAGCTCTGCGACGTGGTCATCAAGGTCAATGGCTTTGAGTTCAGTGCCCATAAGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000448203.2
CDS CAA 72 bp GAAACATTTCTCTCCTTGATGACCACGTCGCAGAGCTaGCCCTCTAGTCTAAGCTCGTTGAAGATCTCACAG +
Preference number: 6 (lower is better)
Translates to: ETFLSLMTTSQS*PSSLSSLKISQ
Trigger: CTGTGAGATCTTCAACGAGCTTAGACTAGAGGGCAAGCTCTGCGACGTGGTCATCAAGGAGAGAAATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438813.1
CDS CAA 90 bp GAAGCAGAATATTTTACTTCATCTCGCAGTGCTAATCCTGGGAAGTaGTCCCGTCTAGCTGCATATTCCTCAACATTGGCCAGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: EAEYFTSSRSANPGK*SRLAAYSSTLASPG
Trigger: ACCAGGGCTGGCCAATGTTGAGGAATATGCAGCTAGACGGGACAACTTCCCAGGATTAGCACTGCGAGATGAAGTAAAATATTCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp GTGAACTTACAGATGCCGATACAATTATCCAAGCACAGCTCTGACTaGAGGAACTCGCAGCAACCCCTGACGATACCCATGATGTTAAAC +
Preference number: 6 (lower is better)
Translates to: VNLQMPIQLSKHSSD*RNSQQPLTIPMMLN
Trigger: GTTTAACATCATGGGTATCGTCAGGGGTTGCTGCGAGTTCCTCAAGTCAGAGCTGTGCTTGGATAATTGTATCGGCATCTGTAAGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000485613.1
CDS TCA 72 bp CCTTCTGCCTCAGCTCAGGACAGTAGTAGTAGTCCGTaGACTTACAGATGCCGATACAATTATCCAAGCACA +
Preference number: 6 (lower is better)
Translates to: PSASAQDSSSSP*TYRCRYNYPST
Trigger: TGTGCTTGGATAATTGTATCGGCATCTGTAAGTTCACGGACTACTACTACTGTCCTGAGCTGAGGCAGAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293303.5
ENST00000485613.1
CDS CAA 72 bp ACAAACAAGAGGTCATCCACCACCTCGATGCCAAAATaGCTACGAGGATTAAACATAGTGGGGATTGTGCGC +
Preference number: 6 (lower is better)
Translates to: TNKRSSTTSMPK*LRGLNIVGIVR
Trigger: GCGCACAATCCCCACTATGTTTAATCCTCGTAGCAATTTTGGCATCGAGGTGGTGGATGACCTCTTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp ATGTCGGGAGAAATGCCAGGGATGTTGTATACCTTCTTTTCAGTGTaGTTCCAGCCACTTGTAAACAAAGCTCTTGATGACCACGTCGCA +
Preference number: 6 (lower is better)
Translates to: MSGEMPGMLYTFFSV*FQPLVNKALDDHVA
Trigger: TGCGACGTGGTCATCAAGAGCTTTGTTTACAAGTGGCTGGAACAACACTGAAAAGAAGGTATACAACATCCCTGGCATTTCTCCCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485613.1
CDS TCA 72 bp CTCCTCCTGCTTCTCATGGGTGCTATGACTGTCCACTaGTTACTTTCAGTGTTATACACTTCTGCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: LLLLLMGAMTVH*LLSVLYTSAVN
Trigger: GTTCACAGCAGAAGTGTATAACACTGAAAGTAATCAGTGGACAGTCATAGCACCCATGAGAAGCAGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS TCA 72 bp CGCCTATTCCACTCCTCCTGCTTCTCATGGGTGCTATaGCTGTCCACTGATTACTTTCAGTGTTATACACTT +
Preference number: 6 (lower is better)
Translates to: RLFHSSCFSWVL*LSTDYFQCYTL
Trigger: AAGTGTATAACACTGAAAGTAATCAGTGGACAGTCATAGCACCCATGAGAAGCAGGAGGAGTGGAATAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp TATTTTACTTCATCTCGCAGTGCTAATCCTGGGAAGTaGTCCCGTCTAGCTGCATATTCCTCAACATTGGCC +
Preference number: 6 (lower is better)
Translates to: YFTSSRSANPGK*SRLAAYSSTLA
Trigger: GGCCAATGTTGAGGAATATGCAGCTAGACGGGACAACTTCCCAGGATTAGCACTGCGAGATGAAGTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp CTGGTGAGTGGGTTGGTGAAATCAGAATTAGAGGGTCCATTCATGTaGAGGTCATACATGGCCTTTAGGGCATTAATGATGACTGGTTTG +
Preference number: 6 (lower is better)
Translates to: LVSGLVKSELEGPFM*RSYMAFRALMMTGL
Trigger: CAAACCAGTCATCATTAATGCCCTAAAGGCCATGTATGACCTCAACATGAATGGACCCTCTAATTCTGATTTCACCAACCCACTCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 72 bp ATTAGCTTCATCATGTCGGGAGAAATGCCAGGGATGTaGTATACCTTCTTTTCAGTGTTGTTCCAGCCACTT +
Preference number: 6 (lower is better)
Translates to: ISFIMSGEMPGM*YTFFSVLFQPL
Trigger: AAGTGGCTGGAACAACACTGAAAAGAAGGTATACAACATCCCTGGCATTTCTCCCGACATGATGAAGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS CAA 72 bp GGGTTGGTGAAATCAGAATTAGAGGGTCCATTCATGTaGAGGTCATACATGGCCTTTAGGGCATTAATGATG +
Preference number: 6 (lower is better)
Translates to: GLVKSELEGPFM*RSYMAFRALMM
Trigger: CATCATTAATGCCCTAAAGGCCATGTATGACCTCAACATGAATGGACCCTCTAATTCTGATTTCACCAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293303.5
CDS CAA 90 bp TACTCAATGATTAGCTTCATCATGTCGGGAGAAATGCCAGGGATGTaGTATACCTTCTTTTCAGTGTTGTTCCAGCCACTTGTAAACAAA +
Preference number: 6 (lower is better)
Translates to: YSMISFIMSGEMPGM*YTFFSVLFQPLVNK
Trigger: TTTGTTTACAAGTGGCTGGAACAACACTGAAAAGAAGGTATACAACATCCCTGGCATTTCTCCCGACATGATGAAGCTAATCATTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293303.5
ENST00000438813.1
ENST00000448203.2
ENST00000485613.1
CDS CAA 72 bp CACTTTAAAATGGCCTCAAATACAGCATCTTCCTGTTaGACATTGAGCTCATCTTTCTCAATGATATCCTTA +
Preference number: 6 (lower is better)
Translates to: HFKMASNTASSC*TLSSSFSMISL
Trigger: TAAGGATATCATTGAGAAAGATGAGCTCAATGTCAAACAGGAAGATGCTGTATTTGAGGCCATTTTAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293303.5