RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150361

Ensembl transcript IDs: ENST00000377844.9, ENST00000545028.2

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGGCAATCTCTTGGATATTGCCATAGACTATAAAATGATTGAATaGGTTGTGGTCATGAAACTATCCATGTCACAAATATTGGTCTCT +
Preference number: 1 (lower is better)
Translates to: LGNLLDIAIDYKMIE*VVVMKLSMSQILVS
Trigger: AGAGACCAATATTTGTGACATGGATAGTTTCATGACCACAACTCATTCAATCATTTTATAGTCTATGGCAATATCCAAGAGATTGCCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR GCA 90 bp GAAAACAATCCTTTGTGTTTGCCAGTTTCAGATTGCCAATATGGTTaGAATAAAATTCAACCATTATCTCTGATGAGATATGCAGCTTTG +
Preference number: 1 (lower is better)
Translates to: ENNPLCLPVSDCQYG*NKIQPLSLMRYAAL
Trigger: CAAAGCTGCATATCTCATCAGAGATAATGGTTGAATTTTATTGCAACCATATTGGCAATCTGAAACTGGCAAACACAAAGGATTGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR TCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCATAGCTTAGGAAAATaGGGCAGAAGCAGGTTTGTT +
Preference number: 2 (lower is better)
Translates to: YTELNIRQKPNNYTASLAHSLGK*GRSRFV
Trigger: AACAAACCTGCTTCTGCCTCATTTTCCTAAGCTATG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCATAGCTTAGGAAAATaGGGCAGAAGCAGGTTTGTT +
Preference number: 2 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNHSLGK*GRSRFV
Trigger: AACAAACCTGCTTCTGCCTCATTTTCCTAAGCTATG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAGAGATCCTTGTTCTTaGAGAGTTTTCATCTCTGGA +
Preference number: 2 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNRDPCS*RVFISG
Trigger: TCCAGAGATGAAAACTCTTCAAGAACAAGGATCTCT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR TCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTAATGAGTTGTGGTCATaGAACTATCCATGTCACAAA +
Preference number: 2 (lower is better)
Translates to: YTELNIRQKPNNYTASLANELWS*NYPCHK
Trigger: TTTGTGACATGGATAGTTTCATGACCACAACTCATT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAATGAGTTGTGGTCATaGAACTATCCATGTCACAAA +
Preference number: 2 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNNELWS*NYPCHK
Trigger: TTTGTGACATGGATAGTTTCATGACCACAACTCATT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATACAATCCTTTGTGTTTaGCAGTTTCAGATTGCCAAT +
Preference number: 2 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNTILCV*QFQIAN
Trigger: ATTGGCAATCTGAAACTGGCAAACACAAAGGATTGT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCAAGAGTTTTCATCTCTaGAAGTTCTCATTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCKSFHL*KFSFLP
Trigger: TGGCAAGAATGAGAACTTCCAGAGATGAAAACTCTT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCATGTCACAAATATTaGTCTCTCCTTTCAACTGCT +
Preference number: 2 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPCHKY*SLLSTA
Trigger: AGCAGTTGAAAGGAGAGACCAATATTTGTGACATGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCCATGTCACAAATATTaGTCTCTCCTTTCAACTGCT +
Preference number: 2 (lower is better)
Translates to: DENMKSAFFLAIIINTPTPCHKY*SLLSTA
Trigger: AGCAGTTGAAAGGAGAGACCAATATTTGTGACATGG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTAACAATCCTTTGTGTTaGCCAGTTTCAGATTGCCAA +
Preference number: 3 (lower is better)
Translates to: YTELNIRQKPNNYTASLANNPLC*PVSDCQ
Trigger: TTGGCAATCTGAAACTGGCAAACACAAAGGATTGTT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTCCATGTCACAAATATaGGTCTCTCCTTTCAACTGC +
Preference number: 3 (lower is better)
Translates to: DENMKSAFFLAIIINTPTSMSQI*VSPFNC
Trigger: GCAGTTGAAAGGAGAGACCAATATTTGTGACATGGA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTACTCTTGGCAATCTCTaGGATATTGCCATAGACTAT +
Preference number: 3 (lower is better)
Translates to: DENMKSAFFLAIIINTPTTLGNL*DIAIDY
Trigger: ATAGTCTATGGCAATATCCAAGAGATTGCCAAGAGT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR TCA 72 bp GTACAGATCAATGTAACAAGTTTGAAAAATGGGCGATaGGAATATGAAGTCTGCCTTCTTTCTAGCAATAAT +
Preference number: 3 (lower is better)
Translates to: VQINVTSLKNGR*EYEVCLLSSNN
Trigger: ATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATCGCCCATTTTTCAAACTTGTTACATTGATCTGTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR GCA 72 bp CCTTTGTGTTTGCCAGTTTCAGATTGCCAATATGGTTaGAATAAAATTCAACCATTATCTCTGATGAGATAT +
Preference number: 3 (lower is better)
Translates to: PLCLPVSDCQYG*NKIQPLSLMRY
Trigger: ATATCTCATCAGAGATAATGGTTGAATTTTATTGCAACCATATTGGCAATCTGAAACTGGCAAACACAAAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGTGGGCTGCGCGCTCTaGCAGGCGAAGGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFVGCAL*QAKAGA
Trigger: CGCTCCAGCCTTCGCCTGGCAGAGCGCGCAGCCCAC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCGTGGGCTGCGCGCTCTaGCAGGCGAAGGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCVGCAL*QAKAGA
Trigger: CGCTCCAGCCTTCGCCTGGCAGAGCGCGCAGCCCAC...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCGCAGGACCTGGGCGTaGGGACACCACCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFRRTWA*GHHQAG
Trigger: TCCTGCCTGGTGGTGTCCCCACGCCCAGGTCCTGCG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCGGGTCCGCAGGACCTaGGCGTGGGGACACCACCAG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWRVRRT*AWGHHQ
Trigger: CTGGTGGTGTCCCCACGCCCAGGTCCTGCGGACCCG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACGGGTCCGCAGGACCTaGGCGTGGGGACACCACCAG +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVRVRRT*AWGHHQ
Trigger: CTGGTGGTGTCCCCACGCCCAGGTCCTGCGGACCCG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCGCGCGTTTCAGCCGTaGTCGGGTCCGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLARAFQP*SGPQDL
Trigger: CAGGTCCTGCGGACCCGACCACGGCTGAAACGCGCG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGAGGCTGGTCAGCAGGTaGGGGAGGACAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWRLVSR*GRTAGP
Trigger: GGGCCCCGCTGTCCTCCCCCACCTGCTGACCAGCCT...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCAGGCTGGTCAGCAGGTaGGGGAGGACAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCRLVSR*GRTAGP
Trigger: GGGCCCCGCTGTCCTCCCCCACCTGCTGACCAGCCT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCGCGCGTTTCAGCCGTaGTCGGGTCCGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLRAFQP*SGPQDL
Trigger: CAGGTCCTGCGGACCCGACCACGGCTGAAACGCGCG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCTGCCAGGCGAAGGCTaGAGCGCAGACGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLPGEG*SADGKA
Trigger: GGCTTTGCCGTCTGCGCTCCAGCCTTCGCCTGGCAG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCCAGAAGACGCTAGGTaGGCTGCGCGCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNPEDAR*AARSAR
Trigger: CCTGGCAGAGCGCGCAGCCCACCTAGCGTCTTCTGG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGCTGAGAATCCTCGATaGCCGCGCGAGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVAENPR*PRESPV
Trigger: CACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTGCGGGATGCGCCCTCTaGACCCCTAGAGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLAAGCAL*TPRARR
Trigger: TCTTCTGGCTCTAGGGGTGCAGAGGGCGCATCCCGC...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTGAGGAAGAGGCGGGATaGGCCCTCTGCACCCCTAGA +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLAEEEAG*ALCTPR
Trigger: TCTAGGGGTGCAGAGGGCGCATCCCGCCTCTTCCTC...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTTGCCCAGGAGCCCCTTaGTGCAGCCTCGTGGCAACT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFCPGAP*CSLVAT
Trigger: AGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCA...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCGCAGGACCTGGGCGTaGGGACACCACCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILRRTWA*GHHQAG
Trigger: TCCTGCCTGGTGGTGTCCCCACGCCCAGGTCCTGCG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCTGCCAGGCGAAGGCTaGAGCGCAGACGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLLPGEG*SADGKA
Trigger: GGCTTTGCCGTCTGCGCTCCAGCCTTCGCCTGGCAG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATGAAGAGAGTCCTGGCTaGCTGCTGAGTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNEESPG*LLSALP
Trigger: GGGCAGGGCACTCAGCAGCCAGCCAGGACTCTCTTC...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTGGGACGCCAAAAGCTaGGAATCCTCGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLAWDAKS*ESSMPA
Trigger: CGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTGGCCTTTTCGAGGATaGCCCGATAGCCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNWPFRG*PDSLPG
Trigger: ACCCGGCAGGCTATCGGGGCATCCTCGAAAAGGCCA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTGGCCTTTTCGAGGATaGCCCGATAGCCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLAWPFRG*PDSLPG
Trigger: ACCCGGCAGGCTATCGGGGCATCCTCGAAAAGGCCA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATATCTCTTGGTGCACCTaGGCCCCTGTCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNISWCT*APVPGL
Trigger: AAGGCCAGGGACAGGGGCGCAGGTGCACCAAGAGAT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCGCCAGATCTCTTGGTaGACCTGCGCCCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLRQISW*TCAPVP
Trigger: AGGGACAGGGGCGCAGGTGCACCAAGAGATCTGGCG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAGCTCCGGAGGCGGCTaGAGCTGGATACACCTCACT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNSSGGG*SWIHLT
Trigger: AGTGAGGTGTATCCAGCTGCAGCCGCCTCCGGAGCT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTGCTCAAAGCTGCCACTaGCGTCCTGTTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLAAQSCH*RPVAGS
Trigger: GCTGCCTGCAACAGGACGGCAGTGGCAGCTTTGAGC...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCAGGAGCCCCTTGCTaGAGCCTCGTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPGAPC*SLVATG
Trigger: TCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATGCCCAGGAGCCCCTTaGTGCAGCCTCGTGGCAACT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVCPGAP*CSLVAT
Trigger: AGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCCTCGCCAGATCTCTTaGTGCACCTGCGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLPRQIS*CTCAPV
Trigger: GACAGGGGCGCAGGTGCACCAAGAGATCTGGCGAGG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATGGAGGCGGCTGCAGCTaGATACACCTCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNGGGCS*IHLTGM
Trigger: CATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCC...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGGACAACCCTTAGGCTaGAGATGCGCGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFGQPLG*RCAREG
Trigger: TCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCCAGAAGACGCTAGGTaGGCTGCGCGCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTPEDAR*AARSAR
Trigger: CCTGGCAGAGCGCGCAGCCCACCTAGCGTCTTCTGG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCACGCAGGAGTAGGCTaGTCAGCAGGTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLHAGVG*SAGGGG
Trigger: TCCTCCCCCACCTGCTGACCAGCCTACTCCTGCGTG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTTGCTGCAGCCTCGTaGCAACTGGAAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLAAAS*QLEAGC
Trigger: GCACCCTGCTTCCAGTTGCCACGAGGCTGCAGCAAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCTTGCTGCAGCCTCGTaGCAACTGGAAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLALAAAS*QLEAGC
Trigger: GCACCCTGCTTCCAGTTGCCACGAGGCTGCAGCAAG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGAAGAGAGTCCTGGCTaGCTGCTGAGTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWEESPG*LLSALP
Trigger: GGGCAGGGCACTCAGCAGCCAGCCAGGACTCTCTTC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTGGGACGCCAAAAGCTaGGAATCCTCGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCWDAKS*ESSMPA
Trigger: CGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCA...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAAGGAGACGGGTGGCTaGAGAGTTTCCAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNKETGG*RVSSGV
Trigger: GACTCCGCTGGAAACTCTTCAGCCACCCGTCTCCTT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGATGCCCCGATAGCCTaGCGGGTGGCTCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWDAPIA*RVALRK
Trigger: CTTTCTCAGAGCCACCCGGCAGGCTATCGGGGCATC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGATGCCCCGATAGCCTaGCGGGTGGCTCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVDAPIA*RVALRK
Trigger: CTTTCTCAGAGCCACCCGGCAGGCTATCGGGGCATC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAATCTCTTGGTGCACCTaGGCCCCTGTCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVISWCT*APVPGL
Trigger: AAGGCCAGGGACAGGGGCGCAGGTGCACCAAGAGAT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCGCCAGATCTCTTGGTaGACCTGCGCCCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILRQISW*TCAPVP
Trigger: AGGGACAGGGGCGCAGGTGCACCAAGAGATCTGGCG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTAGCTCCGGAGGCGGCTaGAGCTGGATACACCTCACT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLSSGGG*SWIHLT
Trigger: AGTGAGGTGTATCCAGCTGCAGCCGCCTCCGGAGCT...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGCGGGATGCGCCCTCTaGACCCCTAGAGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTAGCAL*TPRARR
Trigger: TCTTCTGGCTCTAGGGGTGCAGAGGGCGCATCCCGC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCAGGAGCCCCTTGCTaGAGCCTCGTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPGAPC*SLVATG
Trigger: TCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTCGCCAGATCTCTTaGTGCACCTGCGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPRQIS*CTCAPV
Trigger: GACAGGGGCGCAGGTGCACCAAGAGATCTGGCGAGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGGAGGCGGCTGCAGCTaGATACACCTCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWGGGCS*IHLTGM
Trigger: CATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGGACAACCCTTAGGCTaGAGATGCGCGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVGQPLG*RCAREG
Trigger: TCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCACGCAGGAGTAGGCTaGTCAGCAGGTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTHAGVG*SAGGGG
Trigger: TCCTCCCCCACCTGCTGACCAGCCTACTCCTGCGTG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGTGGAAGGAGACGGGTaGCTGAAGAGTTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFVEGDG*LKSFQR
Trigger: CCGCTGGAAACTCTTCAGCCACCCGTCTCCTTCCAC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCGTAGAAGAGAGTCCTaGCTGGCTGCTGAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLARRRES*LAAECP
Trigger: AGGGCACTCAGCAGCCAGCCAGGACTCTCTTCTACG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCGTAGAAGAGAGTCCTaGCTGGCTGCTGAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFRRRES*LAAECP
Trigger: AGGGCACTCAGCAGCCAGCCAGGACTCTCTTCTACG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGAAAACCGTCACATGTaGCCACTCCGACACCCCCTC +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFENRHM*PLRHPL
Trigger: GAGGGGGTGTCGGAGTGGCCACATGTGACGGTTTTC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATGAAAAAGCCCGCCTGTaGAGCTGTCAAGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNEKARL*SCQGPH
Trigger: GTGAGGACCTTGACAGCTTCACAGGCGGGCTTTTTC...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTAAGGAGACGGGTGGCTaGAGAGTTTCCAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLKETGG*RVSSGV
Trigger: GACTCCGCTGGAAACTCTTCAGCCACCCGTCTCCTT...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTGTCTGGCTCCACTTTaGGCTCTTGCAGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLACLAPL*ALAEPA
Trigger: GGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGCTCAAAGCTGCCACTaGCGTCCTGTTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTAQSCH*RPVAGS
Trigger: GCTGCCTGCAACAGGACGGCAGTGGCAGCTTTGAGC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACCCAGTGCTCAAAGCTaGCACTGCCGTCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVPSAQS*HCRPVA
Trigger: TGCAACAGGACGGCAGTGGCAGCTTTGAGCACTGGG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCGTCCAGGAAAGTCCATaGCTGGCACCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCVQESP*LAPPPP
Trigger: AGGAGGAGGTGGTGCCAGGCATGGACTTTCCTGGAC...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTGGATACACCTCACTaGGATGCGCTTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLDTPH*DALVAE
Trigger: CTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGAGAGCCCCGTGTTATaGCGAGGTGGGACAACCCTT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWESPVL*RGGTTL
Trigger: AAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGTGGAAGGAGACGGGTaGCTGAAGAGTTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWVEGDG*LKSFQR
Trigger: CCGCTGGAAACTCTTCAGCCACCCGTCTCCTTCCAC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCAGCCTCGTGGCAACTaGAAGCAGGGTGCCATTCAG +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLQPRGN*KQGAIQ
Trigger: CTGAATGGCACCCTGCTTCCAGTTGCCACGAGGCTG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCAGCCTCGTGGCAACTaGAAGCAGGGTGCCATTCAG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWQPRGN*KQGAIQ
Trigger: CTGAATGGCACCCTGCTTCCAGTTGCCACGAGGCTG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGAAAACCGTCACATGTaGCCACTCCGACACCCCCTC +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLENRHM*PLRHPL
Trigger: GAGGGGGTGTCGGAGTGGCCACATGTGACGGTTTTC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGAAAAAGCCCGCCTGTaGAGCTGTCAAGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWEKARL*SCQGPH
Trigger: GTGAGGACCTTGACAGCTTCACAGGCGGGCTTTTTC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATGTCTGGCTCCACTTTaGGCTCTTGCAGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVCLAPL*ALAEPA
Trigger: GGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTACCACCTGTGGAAGCTaGAGAAGGCACGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTTTCGS*RRHAAA
Trigger: TGCTGCAGCGTGCCTTCTTCAGCTTCCACAGGTGGT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCCGGGAACAGTGATTTaGAGCAGGAGCATCATGACC +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNPGTVI*SRSIMT
Trigger: GGTCATGATGCTCCTGCTTCAAATCACTGTTCCCGG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACCTCACTGGGATaGGCTTGTGGCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNYTSLG*ACGRAL
Trigger: TAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCAGTGCTCAAAGCTaGCACTGCCGTCCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPSAQS*HCRPVA
Trigger: TGCAACAGGACGGCAGTGGCAGCTTTGAGCACTGGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGAGAGCCCCGTGTTATaGCGAGGTGGGACAACCCTT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTESPVL*RGGTTL
Trigger: AAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTACACCGCTTCTCTCTTaGCTTTTGAGCAGGCGACTC +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLATPLLS*LLSRRL
Trigger: GAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCAGCCCTTTTTCGTGTaGTCCAGGAAAGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFQPFFV*SRKVHA
Trigger: GGCATGGACTTTCCTGGACCACACGAAAAAGGGCTG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPSPVA*LELSGS
Trigger: GGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCTGGCCAGTAGTTTATaGAGCTCCTCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLALASSL*SSSAGR
Trigger: CCTTCCAGCTGAGGAGCTCCATAAACTACTGGCCAG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTAACTCAATGCATCCTTaGGCATCTGCGAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFNSMHP*ASAKAR
Trigger: TCGAGCCTTCGCAGATGCTCAAGGATGCATTGAGTT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCGGGAACAGTGATTTaGAGCAGGAGCATCATGACC +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPGTVI*SRSIMT
Trigger: GGTCATGATGCTCCTGCTTCAAATCACTGTTCCCGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGCCCAGAGCCTGACATaGTTTACGCACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLAQSLT*FTHRRQ
Trigger: TTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTACATCCTTCACCTGTTaGCTGGCTAGAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLATSFTC*LARVVW
Trigger: CCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCAAACTGCAGCCTTCTaGCATTCATCATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNQTAAF*HSSSLP
Trigger: AGGCAGGGATGATGAATGGCAGAAGGCTGCAGTTTG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCACTGGGATGCGCTTGTaGCAGAGCCTTAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCTGMRL*QSLSRE
Trigger: TTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAACTGGGATGCGCTTGTaGCAGAGCCTTAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVTGMRL*QSLSRE
Trigger: TTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCACACCGCTTCTCTCTTaGCTTTTGAGCAGGCGACTC +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCTPLLS*LLSRRL
Trigger: GAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCAGCCCTTTTTCGTGTaGTCCAGGAAAGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWQPFFV*SRKVHA
Trigger: GGCATGGACTTTCCTGGACCACACGAAAAAGGGCTG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTGGCTAGAGTTGTCTaGCTCCACTTTGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLARVV*LHFELL
Trigger: CAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPSPVA*LELSGS
Trigger: GGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGAGCTTCATGAGGAAGTaGCAGCACACTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWSFMRK*QHTSTT
Trigger: GGTGGTGGAAGTGTGCTGCCACTTCCTCATGAAGCT...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACTGGCCAGTAGTTTATaGAGCTCCTCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVLASSL*SSSAGR
Trigger: CCTTCCAGCTGAGGAGCTCCATAAACTACTGGCCAG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGTCAGCCAATATCTGTaGTGGAAGCAGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFVSQYL*WKQWQS
Trigger: AGACTGCCACTGCTTCCACCACAGATATTGGCTGAC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAAACTCAATGCATCCTTaGGCATCTGCGAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVNSMHP*ASAKAR
Trigger: TCGAGCCTTCGCAGATGCTCAAGGATGCATTGAGTT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCAGTAGCCGGGAACAGTaGTTTGAAGCAGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCSSREQ*FEAGAS
Trigger: TGATGCTCCTGCTTCAAATCACTGTTCCCGGCTACT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGTACACCTCACTGGGATaGGCTTGTGGCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILYTSLG*ACGRAL
Trigger: TAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTA...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGCCCAGAGCCTGACATaGTTTACGCACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTAQSLT*FTHRRQ
Trigger: TTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGCTTCTTCCAGAAAGTaGTCACACCGCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFASSRK*SHRFSL
Trigger: AAGAGAGAAGCGGTGTGAGCACTTTCTGGAAGAAGC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTCCACTTTGAGCTCTTaGAGAACCAGCCCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNSTLSS*RTSPFS
Trigger: CGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCTGAAGAAGGCACGCTaGAGCAAGAAGGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLALKKAR*SKKVLN
Trigger: ATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTCTGCTACACCAACTGTaGTCCGAGCAATTGACATAC +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLALLHQL*SEQLTY
Trigger: GTATGTCAATTGCTCGGAGCACAGTTGGTGTAGCAG...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCTGCTACACCAACTGTaGTCCGAGCAATTGACATAC +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLLHQL*SEQLTY
Trigger: GTATGTCAATTGCTCGGAGCACAGTTGGTGTAGCAG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCTTGCCATTCAATGCTaGTACACCAACTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWLAIQC*YTNCAP
Trigger: CGGAGCACAGTTGGTGTAGCAGCATTGAATGGCAAG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACCACACAGGCACCTaGTCTCCCAATATTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNYHTGT*SPNIQG
Trigger: TCCTTGAATATTGGGAGAGCAGGTGCCTGTGTGGTA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCTGGCTAGAGTTGTCTaGCTCCACTTTGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLLARVV*LHFELL
Trigger: CAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGGTCCCAGAGAGCATTaGGGTCTATGCCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVGPREH*GLCLPF
Trigger: AAATGGAAGGCATAGACCCCAATGCTCTCTGGGACC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGGTCCCAGAGAGCATTaGGGTCTATGCCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWGPREH*GLCLPF
Trigger: AAATGGAAGGCATAGACCCCAATGCTCTCTGGGACC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTAGCTTCATGAGGAAGTaGCAGCACACTTCCACCACC +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTSFMRK*QHTSTT
Trigger: GGTGGTGGAAGTGTGCTGCCACTTCCTCATGAAGCT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCTCTCCTCTTACACATaGGAGCACACATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLSSYT*EHTCST
Trigger: AGTGGAACATGTGTGCTCCCATGTGTAAGAGGAGAG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGTTTTCGCCCAGAGCCTaGCATGCTTTACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILFSPRA*HALRTE
Trigger: TTCTGTGCGTAAAGCATGTCAGGCTCTGGGCGAAAA...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTATGCCTTCCATTTTaGTCTCCTCTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLCLPF*SPLAWL
Trigger: AAGCCAAGCAAGAGGAGATCAAAATGGAAGGCATAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTGGCGTTCTTGTCCTTaGAGCTCAGAGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTWRSCP*SSEFSV
Trigger: GACACTGAACTCTGAGCTGCAAGGACAAGAACGCCA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCGGAGTCGCAGAATGTaGTTCACATCGAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNRSRRM*FTSKSF
Trigger: AAAAGACTTCGATGTGAAGCACATTCTGCGACTCCG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCGGAGTCGCAGAATGTaGTTCACATCGAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFRSRRM*FTSKSF
Trigger: AAAAGACTTCGATGTGAAGCACATTCTGCGACTCCG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGCTTCTTCCAGAAAGTaGTCACACCGCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLASSRK*SHRFSL
Trigger: AAGAGAGAAGCGGTGTGAGCACTTTCTGGAAGAAGC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTCCACTTTGAGCTCTTaGAGAACCAGCCCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCSTLSS*RTSPFS
Trigger: CGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGA...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGACATCCTTCACCTGTTaGCTGGCTAGAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILTSFTC*LARVVW
Trigger: CCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACAGAACAAGCCTATGTaGAGGTATCTTTCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVQNKPM*RYLSVP
Trigger: GGGAACCGAAAGATACCTGCACATAGGCTTGTTCTG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCAAGCAGCCTGTATATaGAAATTGGACAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFQAACI*KLDKVP
Trigger: TGGGACCTTGTCCAATTTGCATATACAGGCTGCTTG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCTGAAGAAGGCACGCTaGAGCAAGAAGGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWLKKAR*SKKVLN
Trigger: ATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGCCATTCATCATCCCTaGCTGGATCCACAGATTTGT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWAIHHP*LDPQIC
Trigger: ACAAATCTGTGGATCCAGGCAGGGATGATGAATGGC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCAAACTGCAGCCTTCTaGCATTCATCATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTQTAAF*HSSSLP
Trigger: AGGCAGGGATGATGAATGGCAGAAGGCTGCAGTTTG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTTGCCATTCAATGCTaGTACACCAACTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILLAIQC*YTNCAP
Trigger: CGGAGCACAGTTGGTGTAGCAGCATTGAATGGCAAG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCAACTTGCCATTCAATaGTGCTACACCAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNQLAIQ*CYTNCA
Trigger: AGCACAGTTGGTGTAGCAGCATTGAATGGCAAGTTG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCTGTGGTGGAAGCAGTaGCAGTCTTATAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLLWWKQ*QSYKGK
Trigger: CTTGCCTTTATAAGACTGCCACTGCTTCCACCACAG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTGTGGTGGAAGCAGTaGCAGTCTTATAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCLWWKQ*QSYKGK
Trigger: CTTGCCTTTATAAGACTGCCACTGCTTCCACCACAG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGTCAGCCAATATCTGTaGTGGAAGCAGTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTVSQYL*WKQWQS
Trigger: AGACTGCCACTGCTTCCACCACAGATATTGGCTGAC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACCATTGTTGACTCTGTaGATCCCACCTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVPLLTL*IPPFHC
Trigger: ACAGTGGAAAGGTGGGATCCACAGAGTCAACAATGG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTCTCCTCTTACACATaGGAGCACACATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCLSSYT*EHTCST
Trigger: AGTGGAACATGTGTGCTCCCATGTGTAAGAGGAGAG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTTCAAAGGAGCCACCATaGTCCAAGTGTCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLSKEPP*SKCLFW
Trigger: CCAAAACAGACACTTGGACCATGGTGGCTCCTTTGA...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGAGTCCAAATCACTTTaGGGTGTCATTGAATGGCCG +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTESKSL*GVIEWP
Trigger: CGGCCATTCAATGACACCTCAAAGTGATTTGGACTC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR TCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCTATGCCTTCCATTTTaGTCTCCTCTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWLCLPF*SPLAWL
Trigger: AAGCCAAGCAAGAGGAGATCAAAATGGAAGGCATAG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCTTCATCAGGAACATTaGCATCATCACTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLLHQEH*HHHWPV
Trigger: TACTGGCCAGTGATGATGTCAATGTTCCTGATGAAG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGTGTGCTCCGAGCAATTaGCATACTGGCTACAAATGT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWCAPSN*HTGYKC
Trigger: ACATTTGTAGCCAGTATGTCAATTGCTCGGAGCACA...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTATCACGACCTCCAACTaGATACAACTTGCCATTCAA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFITTSN*IQLAIQ
Trigger: TTGAATGGCAAGTTGTATTCAGTTGGAGGTCGTGAT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTAAGTCAATTGCTTTCTaGAATGCCAGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFKSIAF*NARRGG
Trigger: ACCACCTCTTCTGGCATTGCAGAAAGCAATTGACTT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAAGTCAATTGCTTTCTaGAATGCCAGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNKSIAF*NARRGG
Trigger: ACCACCTCTTCTGGCATTGCAGAAAGCAATTGACTT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCAAGCAGCCTGTATATaGAAATTGGACAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLQAACI*KLDKVP
Trigger: TGGGACCTTGTCCAATTTGCATATACAGGCTGCTTG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTTCATTGCATCTACTCTaGATGTCATACTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFSLHLL*MSYLTH
Trigger: GTGGGTCAAGTATGACATGCAGAGTAGATGCAATGA...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGCATGCTCAGGTCATTaGATCTACTCTGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVACSGH*IYSACH
Trigger: ATGACATGCAGAGTAGATGCAATGACCTGAGCATGC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGCATGCTCAGGTCATTaGATCTACTCTGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLACSGH*IYSACH
Trigger: ATGACATGCAGAGTAGATGCAATGACCTGAGCATGC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGGCCATTCATCATCCCTaGCTGGATCCACAGATTTGT +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILAIHHP*LDPQIC
Trigger: ACAAATCTGTGGATCCAGGCAGGGATGATGAATGGC...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCAACTTGCCATTCAATaGTGCTACACCAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLQLAIQ*CYTNCA
Trigger: AGCACAGTTGGTGTAGCAGCATTGAATGGCAAGTTG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGTACCACACAGGCACCTaGTCTCCCAATATTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILYHTGT*SPNIQG
Trigger: TCCTTGAATATTGGGAGAGCAGGTGCCTGTGTGGTA...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGTCAAAGGAGCCACCATaGTCCAAGTGTCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILSKEPP*SKCLFW
Trigger: CCAAAACAGACACTTGGACCATGGTGGCTCCTTTGA...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
3UTR CAA 72 bp GCAAAGCAAAATGGTAAGCCTAGTGAAAACAATCCTTaGTGTTTGCCAGTTTCAGATTGCCAATATGGTTGC +
Preference number: 4 (lower is better)
Translates to: AKQNGKPSENNP*CLPVSDCQYGC
Trigger: GCAACCATATTGGCAATCTGAAACTGGCAAACACAAAGGATTGTTTTCACTAGGCTTACCATTTTGCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCTTCATCAGGAACATTaGCATCATCACTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTLHQEH*HHHWPV
Trigger: TACTGGCCAGTGATGATGTCAATGTTCCTGATGAAG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTGTGCTCCGAGCAATTaGCATACTGGCTACAAATGT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTCAPSN*HTGYKC
Trigger: ACATTTGTAGCCAGTATGTCAATTGCTCGGAGCACA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCATCACGACCTCCAACTaGATACAACTTGCCATTCAA +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCITTSN*IQLAIQ
Trigger: TTGAATGGCAAGTTGTATTCAGTTGGAGGTCGTGAT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTAGAGATCCTTGTTCTTaGAGAGTTTTCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFRDPCS*RVFISG
Trigger: TCCAGAGATGAAAACTCTTCAAGAACAAGGATCTCT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTAGAGATCCTTGTTCTTaGAGAGTTTTCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLARDPCS*RVFISG
Trigger: TCCAGAGATGAAAACTCTTCAAGAACAAGGATCTCT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCATAGCTTAGGAAAATaGGGCAGAAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLHSLGK*GRSRFV
Trigger: AACAAACCTGCTTCTGCCTCATTTTCCTAAGCTATG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCATAGCTTAGGAAAATaGGGCAGAAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCHSLGK*GRSRFV
Trigger: AACAAACCTGCTTCTGCCTCATTTTCCTAAGCTATG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTTCCATGCTTACACTaGACTCAACATAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLPCLH*TQHKAK
Trigger: TTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTTTGAAAAATGGGCGATaGGAATATGAAGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLKNGR*EYEVCL
Trigger: AAGGCAGACTTCATATTCTCATCGCCCATTTTTCAA...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAAAATAGTCGGAGACTaGACTCAGAACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILKIVGD*TQNKPV
Trigger: CACAGGCTTGTTCTGAGTTCAGTCTCCGACTATTTT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACCTTCATTAACTCAATaGATCCTTGAGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVPSLTQ*ILEHLR
Trigger: TCGCAGATGCTCAAGGATGCATTGAGTTAATGAAGG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCCTTCATTAACTCAATaGATCCTTGAGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLPSLTQ*ILEHLR
Trigger: TCGCAGATGCTCAAGGATGCATTGAGTTAATGAAGG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGACCCACATCATCAATaGATGGAAGATGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVDPHHQ*MEDGFF
Trigger: GAAGAAACCATCTTCCATGCATTGATGATGTGGGTC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTTCATTGCATCTACTCTaGATGTCATACTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLSLHLL*MSYLTH
Trigger: GTGGGTCAAGTATGACATGCAGAGTAGATGCAATGA...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTATTCTTCAGAGCTACTaGAGTCCAAATCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFILQSY*SPNHFE
Trigger: CTCAAAGTGATTTGGACTCCAGTAGCTCTGAAGAAT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAGCCAATATCTGTGGTaGAAGCAGTGGCAGTCTTAT +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILSQYLW*KQWQSY
Trigger: ATAAGACTGCCACTGCTTCCACCACAGATATTGGCT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAAAATAGTCGGAGACTaGACTCAGAACAAGCCTATG +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILKIVGD*TQNKPM
Trigger: CATAGGCTTGTTCTGAGTTCAGTCTCCGACTATTTT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR TCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTTCCATGCTTACACTaGACTCAACATAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCLPCLH*TQHKAK
Trigger: TTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATTGAAAAATGGGCGATaGGAATATGAAGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVLKNGR*EYEVCL
Trigger: AAGGCAGACTTCATATTCTCATCGCCCATTTTTCAA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACAACTGAATACAACTTaGCATTCAATGCTGCTACAC +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVQLNTT*HSMLLH
Trigger: GTGTAGCAGCATTGAATGGCAAGTTGTATTCAGTTG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTATCATGACCTCCTACTaGATAAAGAAAACCGTCACA +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLIMTSY*IKKTVT
Trigger: TGTGACGGTTTTCTTTATGCAGTAGGAGGTCATGAT...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGTCAATAAGTCAAGGTTaGTTGATGACTACCACACAG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWSISQG*LMTTTQ
Trigger: CTGTGTGGTAGTCATCAAGCAACCTTGACTTATTGA...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCAAGAAGGTTCTCAATaGTGTCCTCTTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNQEGSQ*CPLLIP
Trigger: TGGAATTAAAAGAGGACACCATTGAGAACCTTCTTG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTAGACAGTCCATGTCTTaGTTTTGGGATTGTAACATT +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFRQSMS*FWDCNI
Trigger: AATGTTACAATCCCAAAACCAAGACATGGACTGTCT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAGACAGTCCATGTCTTaGTTTTGGGATTGTAACATT +
Preference number: 4 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNRQSMS*FWDCNI
Trigger: AATGTTACAATCCCAAAACCAAGACATGGACTGTCT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCCACTCATTAGTTTGTaGGTCATAGGATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLPLISL*VIGFHS
Trigger: ACTATGGAATCCTATGACCCACAAACTAATGAGTGG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCACTCATTAGTTTGTaGGTCATAGGATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPLISL*VIGFHS
Trigger: ACTATGGAATCCTATGACCCACAAACTAATGAGTGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCCATGTCACAAATATTaGTCTCTCCTTTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLPCHKY*SLLSTA
Trigger: AGCAGTTGAAAGGAGAGACCAATATTTGTGACATGG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGAATGAGTTGTGGTCATaGAACTATCCATGTCACAAA +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWNELWS*NYPCHK
Trigger: TTTGTGACATGGATAGTTTCATGACCACAACTCATT...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR TCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATTCTGCTTCCCGTTATaGCCACATATGATTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVFCFPL*PHMIRK
Trigger: TTTTCTAATCATATGTGGTCATAACGGGAAGCAGAA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGATCATGACCTCCTACTaGATAAAGAAAACCGTCACA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILIMTSY*IKKTVT
Trigger: TGTGACGGTTTTCTTTATGCAGTAGGAGGTCATGAT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTCAATAAGTCAAGGTTaGTTGATGACTACCACACAG +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTSISQG*LMTTTQ
Trigger: CTGTGTGGTAGTCATCAAGCAACCTTGACTTATTGA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTTGCCAGTTTCAGATTaGCAATATGGTTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: YTELNIRQKPNNYTASLALPVSD*QYGCNK
Trigger: TTTATTGCAACCATATTGGCAATCTGAAACTGGCAA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTTTGCCAGTTTCAGATTaGCAATATGGTTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLPVSD*QYGCNK
Trigger: TTTATTGCAACCATATTGGCAATCTGAAACTGGCAA...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGACAATCCTTTGTGTTTaGCAGTTTCAGATTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWTILCV*QFQIAN
Trigger: ATTGGCAATCTGAAACTGGCAAACACAAAGGATTGT...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTCAATGCATGGAAGATaGTTTCTTCATCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCSMHGR*FLHQEH
Trigger: ATGTTCCTGATGAAGAAACCATCTTCCATGCATTGA...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGTCCATGTCTTGGTTTTaGGATTGTAACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWSMSWF*DCNIQQ
Trigger: CTGTTGAATGTTACAATCCCAAAACCAAGACATGGA...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGAGCAATTGACATACTaGCTACAAATGTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: NQILSDEIFCLLLLAISWEQLTY*LQMSIV
Trigger: AACAATGGACATTTGTAGCCAGTATGTCAATTGCTC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAAAGAGTTTTCATCTCTaGAAGTTCTCATTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LPITIPELTNIWPDIFPVKSFHL*KFSFLP
Trigger: TGGCAAGAATGAGAACTTCCAGAGATGAAAACTCTT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAATTGCTTTCTGCAATaGCAGAAGAGGTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILNCFLQ*QKRWFY
Trigger: ATAAAACCACCTCTTCTGGCATTGCAGAAAGCAATT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR GCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTATTTTGATCTCCTCTTaGTTGGCTTCACAAACATCA +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTILISS*LASQTS
Trigger: TGATGTTTGTGAAGCCAAGCAAGAGGAGATCAAAAT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCAAGAAGGTTCTCAATaGTGTCCTCTTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILQEGSQ*CPLLIP
Trigger: TGGAATTAAAAGAGGACACCATTGAGAACCTTCTTG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTCAATGCATGGAAGATaGTTTCTTCATCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTSMHGR*FLHQEH
Trigger: ATGTTCCTGATGAAGAAACCATCTTCCATGCATTGA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTTCCATGTCTTGGTTTTaGGATTGTAACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTSMSWF*DCNIQQ
Trigger: CTGTTGAATGTTACAATCCCAAAACCAAGACATGGA...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGAGCAATTGACATACTaGCTACAAATGTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: DENMKSAFFLAIIINTPTEQLTY*LQMSIV
Trigger: AACAATGGACATTTGTAGCCAGTATGTCAATTGCTC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CCA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAAGAGTTTTCATCTCTaGAAGTTCTCATTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ILSDEIFCLLLLAISWILKSFHL*KFSFLP
Trigger: TGGCAAGAATGAGAACTTCCAGAGATGAAAACTCTT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp AGGCGAAGGCTGGAGCGCAGACGGCAAAGCCGCGCGTTTCAGCCGTaGTCGGGTCCGCAGGACCTGGGCGTGGGGACACCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RRRLERRRQSRAFQP*SGPQDLGVGTPPGR
Trigger: CCTGCCTGGTGGTGTCCCCACGCCCAGGTCCTGCGGACCCGACCACGGCTGAAACGCGCGGCTTTGCCGTCTGCGCTCCAGCCTTCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp AGGCGGGATGCGCCCTCTGCACCCCTAGAGCCAGAAGACGCTAGGTaGGCTGCGCGCTCTGCCAGGCGAAGGCTGGAGCGCAGACGGCAA +
Preference number: 5 (lower is better)
Translates to: RRDAPSAPLEPEDAR*AARSARRRLERRRQ
Trigger: TTGCCGTCTGCGCTCCAGCCTTCGCCTGGCAGAGCGCGCAGCCCACCTAGCGTCTTCTGGCTCTAGGGGTGCAGAGGGCGCATCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp CGCGCGAGAGCCCCGTGTTATGGCGAGGTGGGACAACCCTTAGGCTaGAGATGCGCGAGGGAGGGAGGTCTGAGCGCTCCGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: RARAPCYGEVGQPLG*RCAREGGLSAPKLR
Trigger: CCGGAGCTTCGGAGCGCTCAGACCTCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp AGAGCCCCGTGTTATGGCGAGGTGGGACAACCCTTAGGCTGGAGATaGGCGAGGGAGGGAGGTCTGAGCGCTCCGAAGCTCCGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RAPCYGEVGQPLGWR*AREGGLSAPKLRRR
Trigger: CCGCCTCCGGAGCTTCGGAGCGCTCAGACCTCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACACGGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 90 bp GACACCACCAGGCAGGAGCAGAGGCAGGACTGGGACGCCAAAAGCTaGGAATCCTCGATGCCCGCGCGAGAGCCCCGTGTTATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: DTTRQEQRQDWDAKS*ESSMPAREPRVMAR
Trigger: CCTCGCCATAACACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCAGTCCTGCCTCTGCTCCTGCCTGGTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp CCAAAAGCTGAGAATCCTCGATGCCCGCGCGAGAGCCCCGTGTTATaGCGAGGTGGGACAACCCTTAGGCTGGAGATGCGCGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PKAENPRCPRESPVL*RGGTTLRLEMREGG
Trigger: CCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGCTTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp AGGAGCAGAGGCAGGACTGGGACGCCAAAAGCTGAGAATCCTCGATaGCCGCGCGAGAGCCCCGTGTTATGGCGAGGTGGGACAACCCTT +
Preference number: 5 (lower is better)
Translates to: RSRGRTGTPKAENPR*PRESPVLWRGGTTL
Trigger: AAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCAGTCCTGCCTCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp CCTCTAGTGACTCCACGTAGAAGAGAGTCCTGGCTGGCTGCTGAGTaGCCTGCCCAGGAGCCCCTTGCTGCAGCCTCGTGGCAACTGGAA +
Preference number: 5 (lower is better)
Translates to: PLVTPRRRESWLAAE*PAQEPLAAASWQLE
Trigger: TTCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCAGGGCACTCAGCAGCCAGCCAGGACTCTCTTCTACGTGGAGTCACTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp TCCGAAGCTCCGGAGGCGGCTGCAGCTGGATACACCTCACTGGGATaGGCTTGTGGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SEAPEAAAAGYTSLG*ACGRALVGKVVAFL
Trigger: CAAGAACGCCACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCCGGAGCTTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp TCCGGAGGCGGCTGCAGCTGGATACACCTCACTGGGATGCGCTTGTaGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTTCTTGTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: SGGGCSWIHLTGMRL*QSLSREGGGVLVLA
Trigger: TGCAAGGACAAGAACGCCACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp GATCTCTTGGTGCACCTGCGCCCCTGTCCCTGGCCTTTTCGAGGATaGCCCGATAGCCTGCCGGGTGGCTCTGAGAAAGTCAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: DLLVHLRPCPWPFRG*PDSLPGGSEKVNCF
Trigger: AAAGCAATTGACTTTCTCAGAGCCACCCGGCAGGCTATCGGGGCATCCTCGAAAAGGCCAGGGACAGGGGCGCAGGTGCACCAAGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp AAAGTGCTCACACCGCTTCTCTCTTGGCTTTTGAGCAGGCGACTCTaGCTGGGTCCCCAGTGCTCAAAGCTGCCACTGCCGTCCTGTTGC +
Preference number: 5 (lower is better)
Translates to: KVLTPLLSWLLSRRL*LGPQCSKLPLPSCC
Trigger: GCAACAGGACGGCAGTGGCAGCTTTGAGCACTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp GCTCTTGCAGAACCAGCCCTTTTTCGTGTGGTCCAGGAAAGTCCATaGCTGGCACCACCTCCTCCTCTAGTGACTCCACGTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: ALAEPALFRVVQESP*LAPPPPLVTPRRRE
Trigger: CTCTCTTCTACGTGGAGTCACTAGAGGAGGAGGTGGTGCCAGGCATGGACTTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp TGGCCGGTTGATGACAGCCTGTGTCCACATCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTGCAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: WPVDDSLCPHPSPVA*LELSGSTLSSCRTS
Trigger: GCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTGTCATCAACCGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CCA 90 bp CAGCCTGTGTCCACATCCTTCACCTGTTGCCTGGCTAGAGTTGTCTaGCTCCACTTTGAGCTCTTGCAGAACCAGCCCTTTTTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: QPVSTSFTCCLARVV*LHFELLQNQPFFVW
Trigger: CCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS TCA 90 bp GAGTCGCAGAATGTGCTTCACATCGAAGTCTTTTCGCCCAGAGCCTaGCATGCTTTACGCACAGAAGGCAAAAGGCTGGCAGCTCACGCA +
Preference number: 5 (lower is better)
Translates to: ESQNVLHIEVFSPRA*HALRTEGKRLAAHA
Trigger: TGCGTGAGCTGCCAGCCTTTTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGCGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 90 bp AGCTTCATGAGGAAGTGGCAGCACACTTCCACCACCTGTGGAAGCTaGAGAAGGCACGCTGCAGCAAGAAGGTTCTCAATGGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SFMRKWQHTSTTCGS*RRHAAARRFSMVSS
Trigger: AGAGGACACCATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAGCTTCCACAGGTGGTGGAAGTGTGCTGCCACTTCCTCATGAAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp GCAGAATGTGCTTCACATCGAAGTCTTTTCGCCCAGAGCCTGACATaGTTTACGCACAGAAGGCAAAAGGCTGGCAGCTCACGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: AECASHRSLFAQSLT*FTHRRQKAGSSRRS
Trigger: ACTCCTGCGTGAGCTGCCAGCCTTTTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp GAAGGAGACGGGTGGCTGAAGAGTTTCCAGCGGAGTCGCAGAATGTaGTTCACATCGAAGTCTTTTCGCCCAGAGCCTGACATGCTTTAC +
Preference number: 5 (lower is better)
Translates to: EGDGWLKSFQRSRRM*FTSKSFRPEPDMLY
Trigger: GTAAAGCATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGCGACTCCGCTGGAAACTCTTCAGCCACCCGTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp TCACCTGTTGCCTGGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTaGAGAACCAGCCCTTTTTCGTGTGGTCCAGGAAAGTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: SPVAWLELSGSTLSS*RTSPFSCGPGKSMP
Trigger: AGGCATGGACTTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp AAGCCTGTGTCCACATCCTTCACCTGTTGCCTGGCTAGAGTTGTCTaGCTCCACTTTGAGCTCTTGCAGAACCAGCCCTTTTTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: KPVSTSFTCCLARVV*LHFELLQNQPFFVW
Trigger: CCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS CCA 90 bp ACTGAACTCAGAACAAGCCTGTGTCCACATCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTGCAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: TELRTSLCPHPSPVA*LELSGSTLSSCRTS
Trigger: GCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTTGTTCTGAGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACCCTCGCCAGATCTCTaGGTGCACCTGCGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVPSPDL*VHLRPC
Trigger: ACAGGGGCGCAGGTGCACCAAGAGATCTGGCGAGGG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCTCGCCAGATCTCTaGGTGCACCTGCGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPSPDL*VHLRPC
Trigger: ACAGGGGCGCAGGTGCACCAAGAGATCTGGCGAGGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTCTCACTGGGATGCGCTaGTGGCAGAGCCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: TLSTSVGNATEILVLEEFLTGMR*WQSLSR
Trigger: CCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAG...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCACACCGCTTCTCTCTaGGCTTTTGAGCAGGCGACT +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNHTASL*AFEQAT
Trigger: AGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp ACAGCCACACCAAACTGCAGCCTTCTGCCATTCATCATCCCTGCCTaGATCCACAGATTTGTTCTCAGATCATATTTCTCTATAGTTGTA +
Preference number: 5 (lower is better)
Translates to: TATPNCSLLPFIIPA*IHRFVLRSYFSIVV
Trigger: TACAACTATAGAGAAATATGATCTGAGAACAAATCTGTGGATCCAGGCAGGGATGATGAATGGCAGAAGGCTGCAGTTTGGTGTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTCACTGGGATGCGCTaGTGGCAGAGCCTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILLTGMR*WQSLSR
Trigger: CCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCACACCGCTTCTCTCTaGGCTTTTGAGCAGGCGACT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLHTASL*AFEQAT
Trigger: AGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTGTGCCATTCAGCGGATaGAAGGAAGAGGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: TLSTSVGNATEILVLEEFVPFSG*KEEEEE
Trigger: CTCTTCCTCCTCTTCCTTCAATCCGCTGAATGGCAC...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTTGTCTGGCTCCACTTaGAGCTCTTGCAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLALSGST*SSCRTS
Trigger: GCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCGTTGCCTGGCTAGAGTaGTCTGGCTCCACTTTGAGC +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCVAWLE*SGSTLS
Trigger: GCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAAC...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTAGGTCCCAGAGAGCATaGGGGTCTATGCCTTCCATT +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLARSQRA*GSMPSI
Trigger: AATGGAAGGCATAGACCCCAATGCTCTCTGGGACCT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp AATATCAATAAGTCAAGGTTGCTTGATGACTACCACACAGGCACCTaGTCTCCCAATATTCAAGGAAGCCATCTGTGTCCACTCATTAGT +
Preference number: 5 (lower is better)
Translates to: NINKSRLLDDYHTGT*SPNIQGSHLCPLIS
Trigger: ACTAATGAGTGGACACAGATGGCTTCCTTGAATATTGGGAGAGCAGGTGCCTGTGTGGTAGTCATCAAGCAACCTTGACTTATTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 90 bp TTTGCTCAGCATGATGAACAGCTTGATAGAATTCTTCAGAGCTACTaGAGTCCAAATCACTTTGAGGTGTCATTGAATGGCCGGTTGATG +
Preference number: 5 (lower is better)
Translates to: FAQHDEQLDRILQSY*SPNHFEVSLNGRLM
Trigger: CATCAACCGGCCATTCAATGACACCTCAAAGTGATTTGGACTCCAGTAGCTCTGAAGAATTCTATCAAGCTGTTCATCATGCTGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGTGGCGTTCTTGTCCTaGCAGCTCAGAGTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWVAFLS*QLRVQC
Trigger: ACACTGAACTCTGAGCTGCAAGGACAAGAACGCCAC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGTGGCGTTCTTGTCCTaGCAGCTCAGAGTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLVAFLS*QLRVQC
Trigger: ACACTGAACTCTGAGCTGCAAGGACAAGAACGCCAC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTTGTCTGGCTCCACTTaGAGCTCTTGCAGAACCAGC +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCLSGST*SSCRTS
Trigger: GCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAA...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGGTTGCCTGGCTAGAGTaGTCTGGCTCCACTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILVAWLE*SGSTLS
Trigger: GCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAAC...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAGCCGGGAACAGTGATTaGAAGCAGGAGCATCATGAC +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVAGNSD*KQEHHD
Trigger: GTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGC...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGCCGGGAACAGTGATTaGAAGCAGGAGCATCATGAC +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLAGNSD*KQEHHD
Trigger: GTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp AGTCTTATAAAGGCAAGAAGCATGCTCAGGTCATTGCATCTACTCTaGATGTCATACTTGACCCACATCATCAATGCATGGAAGATGGTT +
Preference number: 5 (lower is better)
Translates to: SLIKARSMLRSLHLL*MSYLTHIINAWKMV
Trigger: AACCATCTTCCATGCATTGATGATGTGGGTCAAGTATGACATGCAGAGTAGATGCAATGACCTGAGCATGCTTCTTGCCTTTATAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGAAGGTGGTGGCGTTCTaGTCCTTGCAGCTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILKVVAF*SLQLRV
Trigger: AACTCTGAGCTGCAAGGACAAGAACGCCACCACCTT...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGTCATTGAATGGCCGGTaGATGACAGCCTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILSLNGR*MTACVH
Trigger: GTGGACACAGGCTGTCATCAACCGGCCATTCAATGA...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTAGGTCCCAGAGAGCATaGGGGTCTATGCCTTCCATT +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTRSQRA*GSMPSI
Trigger: AATGGAAGGCATAGACCCCAATGCTCTCTGGGACCT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTAGCATGCTCAGGTCATaGCATCTACTCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: TLSTSVGNATEILVLEEFSMLRS*HLLCMS
Trigger: TGACATGCAGAGTAGATGCAATGACCTGAGCATGCT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATGACCATGTCTGTGTGTaGACATTGGTGGTAAGACAG +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNDHVCV*TLVVRQ
Trigger: CTGTCTTACCACCAATGTCAACACACAGACATGGTC...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATCTGTGCTCCGAGCAATaGACATACTGGCTACAAATG +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLCSEQ*TYWLQM
Trigger: CATTTGTAGCCAGTATGTCAATTGCTCGGAGCACAG...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTCCACTTTGAGCTCTaGCAGAACCAGCCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILLHFEL*QNQPFF
Trigger: GAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCACTTTGAGGTGTCATaGAATGGCCGGTTGATGACA +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWHFEVS*NGRLMT
Trigger: TGTCATCAACCGGCCATTCAATGACACCTCAAAGTG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCATTATGTTTTCCATaGTGTAGCTGTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPLCFP*CSCGPP
Trigger: AGGTGGCCCACAGCTACACAATGGAAAACATAATGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTCTTCATCAGGAACATaGACATCATCACTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNSSSGT*TSSLAS
Trigger: ACTGGCCAGTGATGATGTCAATGTTCCTGATGAAGA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCAGCATGCTCAGGTCATaGCATCTACTCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCSMLRS*HLLCMS
Trigger: TGACATGCAGAGTAGATGCAATGACCTGAGCATGCT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGACCATGTCTGTGTGTaGACATTGGTGGTAAGACAG +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLDHVCV*TLVVRQ
Trigger: CTGTCTTACCACCAATGTCAACACACAGACATGGTC...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGGGCTACAAATGTCCATaGTTGACTCTGTGGATCCCA +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWGYKCP*LTLWIP
Trigger: TGGGATCCACAGAGTCAACAATGGACATTTGTAGCC...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCTGTGCTCCGAGCAATaGACATACTGGCTACAAATG +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLLCSEQ*TYWLQM
Trigger: CATTTGTAGCCAGTATGTCAATTGCTCGGAGCACAG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTATAAGTCAAGGTTGCTaGATGACTACCACACAGGCA +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLAISQGC*MTTTQA
Trigger: TGCCTGTGTGGTAGTCATCAAGCAACCTTGACTTAT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ACTCTTTCAACATCAGTAGGTAACGCTACAGAGATCCTTGTTCTTGAAGAGTTTATAAGTCAAGGTTGCTaGATGACTACCACACAGGCA +
Preference number: 5 (lower is better)
Translates to: TLSTSVGNATEILVLEEFISQGC*MTTTQA
Trigger: TGCCTGTGTGGTAGTCATCAAGCAACCTTGACTTAT...AAACTCTTCAAGAACAAGGATCTCTGTAGCGTTACCTACTGATGTTGAAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGCATCTTTCTGAAGGTTaGCTCAGCATGATGAACAGC +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWHLSEG*LSMMNS
Trigger: GCTGTTCATCATGCTGAGCAAACCTTCAGAAAGATG...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTTTGATCTCCTCTTGCTaGGCTTCACAAACATCACTT +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLALISSC*ASQTSL
Trigger: AAGTGATGTTTGTGAAGCCAAGCAAGAGGAGATCAA...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTTGATCTCCTCTTGCTaGGCTTCACAAACATCACTT +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNLISSC*ASQTSL
Trigger: AAGTGATGTTTGTGAAGCCAAGCAAGAGGAGATCAA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCCATTATGTTTTCCATaGTGTAGCTGTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTPLCFP*CSCGPP
Trigger: AGGTGGCCCACAGCTACACAATGGAAAACATAATGG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTTCTTCATCAGGAACATaGACATCATCACTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLSSSGT*TSSLAS
Trigger: ACTGGCCAGTGATGATGTCAATGTTCCTGATGAAGA...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTCTGCATGTCATACTaGACCCACATCATCAATGCA +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCLCMSY*THIINA
Trigger: TGCATTGATGATGTGGGTCAAGTATGACATGCAGAG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATGTTGTAGCTCCTTTGTaGTTATCCATTCCTCCTACA +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNVVAPL*LSIPPT
Trigger: TGTAGGAGGAATGGATAACAACAAAGGAGCTACAAC...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTTACAAATGTCCATTGTaGACTCTGTGGATCCCACCT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLYKCPL*TLWIPP
Trigger: AGGTGGGATCCACAGAGTCAACAATGGACATTTGTA...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATACAAATGTCCATTGTaGACTCTGTGGATCCCACCT +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVYKCPL*TLWIPP
Trigger: AGGTGGGATCCACAGAGTCAACAATGGACATTTGTA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGGGCTACAAATGTCCATaGTTGACTCTGTGGATCCCA +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILGYKCP*LTLWIP
Trigger: TGGGATCCACAGAGTCAACAATGGACATTTGTAGCC...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATTCCATGTCACAAATATaGGTCTCTCCTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNSMSQI*VSPFNC
Trigger: GCAGTTGAAAGGAGAGACCAATATTTGTGACATGGA...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTACATTTTGATCTCCTCTaGCTTGGCTTCACAAACATC +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVHFDLL*LGFTNI
Trigger: GATGTTTGTGAAGCCAAGCAAGAGGAGATCAAAATG...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCTCTGCATGTCATACTaGACCCACATCATCAATGCA +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILLCMSY*THIINA
Trigger: TGCATTGATGATGTGGGTCAAGTATGACATGCAGAG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTATAGTTGTAGCTCCTTaGTTGTTATCCATTCCTCCT +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLAIVVAP*LLSIPP
Trigger: AGGAGGAATGGATAACAACAAAGGAGCTACAACTAT...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCCAACTGAATACAACTaGCCATTCAATGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCPTEYN*PFNAAT
Trigger: TGTAGCAGCATTGAATGGCAAGTTGTATTCAGTTGG...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGTGTCCACTCATTAGTTaGTGGGTCATAGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWCPLIS*WVIGFH
Trigger: ATGGAATCCTATGACCCACAAACTAATGAGTGGACA...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTATGTCCACTCATTAGTTaGTGGGTCATAGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVCPLIS*WVIGFH
Trigger: ATGGAATCCTATGACCCACAAACTAATGAGTGGACA...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGTCCATGTCACAAATATaGGTCTCTCCTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWSMSQI*VSPFNC
Trigger: GCAGTTGAAAGGAGAGACCAATATTTGTGACATGGA...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATACTCTTGGCAATCTCTaGGATATTGCCATAGACTAT +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNTLGNL*DIAIDY
Trigger: ATAGTCTATGGCAATATCCAAGAGATTGCCAAGAGT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAACAATCCTTTGTGTTaGCCAGTTTCAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNNNPLC*PVSDCQ
Trigger: TTGGCAATCTGAAACTGGCAAACACAAAGGATTGTT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp AATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGAGCATGATGAACAGCTaGATAGAATTCTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NQILSDEIFCLLLLAISWSMMNS*IEFFRA
Trigger: AGCTCTGAAGAATTCTATCAAGCTGTTCATCATGCT...CCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp TACACTGAACTCAACATAAGGCAAAAGCCCAATAATTACACTGCATCTTTGGCTGATAACATCACAAAGTaGCTGCTGCTTCAAATAACT +
Preference number: 5 (lower is better)
Translates to: YTELNIRQKPNNYTASLADNITK*LLLQIT
Trigger: AGTTATTTGAAGCAGCAGCAACTTTGTGATGTTATC...AGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCATTTTGATCTCCTCTaGCTTGGCTTCACAAACATC +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTHFDLL*LGFTNI
Trigger: GATGTTTGTGAAGCCAAGCAAGAGGAGATCAAAATG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTGTTGTAGCTCCTTTGTaGTTATCCATTCCTCCTACA +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTVVAPL*LSIPPT
Trigger: TGTAGGAGGAATGGATAACAACAAAGGAGCTACAAC...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTATAGTTGTAGCTCCTTaGTTGTTATCCATTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLIVVAP*LLSIPP
Trigger: AGGAGGAATGGATAACAACAAAGGAGCTACAACTAT...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTCCTGGATCCACAGATTaGTTCTCAGATCATATTTCT +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLPGSTD*FSDHIS
Trigger: AGAAATATGATCTGAGAACAAATCTGTGGATCCAGG...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTCCAACTGAATACAACTaGCCATTCAATGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTPTEYN*PFNAAT
Trigger: TGTAGCAGCATTGAATGGCAAGTTGTATTCAGTTGG...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp CCAATCAGATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTATCAATAAGTCAAGGTaGCTTGATGACTACCACACA +
Preference number: 5 (lower is better)
Translates to: PIRYCQMKYSVFYSWQSLINKSR*LDDYHT
Trigger: TGTGTGGTAGTCATCAAGCAACCTTGACTTATTGAT...AAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTATCTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAACTCTTGGCAATCTCTaGGATATTGCCATAGACTAT +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVTLGNL*DIAIDY
Trigger: ATAGTCTATGGCAATATCCAAGAGATTGCCAAGAGT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATCACTAGCTTCCATGCTTACACTGAACTCAACATAAGGCAAAAGCCCAATAATAGTGAAAACAATCCTTaGTGTTTGCCAGTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: ITSFHAYTELNIRQKPNNSENNP*CLPVSD
Trigger: ATCTGAAACTGGCAAACACAAAGGATTGTTTTCACT...ATTATTGGGCTTTTGCCTTATGTTGAGTTCAGTGTAAGCATGGAAGCTAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 90 bp TACAAAGTTCCGACTGTAGATTTTCTGGGTTTAGTTCTCGGACTTTaGATTAAAGTTCTTCTTTCTGGCAATAGATGGTATTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: YKVPTVDFLGLVLGL*IKVLLSGNRWYFIA
Trigger: AGCAATGAAATACCATCTATTGCCAGAAAGAAGAACTTTAATGCAAAGTCCGAGAACTAAACCCAGAAAATCTACAGTCGGAACTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp ATACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCCTGGATCCACAGATTaGTTCTCAGATCATATTTCT +
Preference number: 5 (lower is better)
Translates to: ILSDEIFCLLLLAISWILPGSTD*FSDHIS
Trigger: AGAAATATGATCTGAGAACAAATCTGTGGATCCAGG...CAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TACTGTCAGATGAAATATTCTGTCTTCTACTCTTGGCAATCTCTTGGATATTGCATGAGATATGCAGCTTaGATTAGTAGGACAGTTTGT +
Preference number: 5 (lower is better)
Translates to: YCQMKYSVFYSWQSLGYCMRYAA*ISRTVC
Trigger: ACAAACTGTCCTACTAATCAAAGCTGCATATCTCAT...GCAATATCCAAGAGATTGCCAAGAGTAGAAGACAGAATATTTCATCTGACAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTAACAATCCTTTGTGTTaGCCAGTTTCAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTNNPLC*PVSDCQ
Trigger: TTGGCAATCTGAAACTGGCAAACACAAAGGATTGTT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp TTACCAATAACCATTCCCGAACTAACTAACATATGGCCAGACATTTTTCCTGTAAGTGAAAACAATCCTTaGTGTTTGCCAGTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LPITIPELTNIWPDIFPVSENNP*CLPVSD
Trigger: ATCTGAAACTGGCAAACACAAAGGATTGTTTTCACT...TACAGGAAAAATGTCTGGCCATATGTTAGTTAGTTCGGGAATGGTTATTGGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS-3UTR CAA 90 bp GATGAGAATATGAAGTCTGCCTTCTTTCTAGCAATAATCATAAACACTCCAACTATGAGATATGCAGCTTaGATTAGTAGGACAGTTTGT +
Preference number: 5 (lower is better)
Translates to: DENMKSAFFLAIIINTPTMRYAA*ISRTVC
Trigger: ACAAACTGTCCTACTAATCAAAGCTGCATATCTCAT...AGTTGGAGTGTTTATGATTATTGCTAGAAAGAAGGCAGACTTCATATTCTCATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp CTGGAGCGCAGACGGCAAAGCCGCGCGTTTCAGCCGTaGTCGGGTCCGCAGGACCTGGGCGTGGGGACACCA +
Preference number: 6 (lower is better)
Translates to: LERRRQSRAFQP*SGPQDLGVGTP
Trigger: TGGTGTCCCCACGCCCAGGTCCTGCGGACCCGACCACGGCTGAAACGCGCGGCTTTGCCGTCTGCGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp GCGCCCTCTGCACCCCTAGAGCCAGAAGACGCTAGGTaGGCTGCGCGCTCTGCCAGGCGAAGGCTGGAGCGC +
Preference number: 6 (lower is better)
Translates to: APSAPLEPEDAR*AARSARRRLER
Trigger: GCGCTCCAGCCTTCGCCTGGCAGAGCGCGCAGCCCACCTAGCGTCTTCTGGCTCTAGGGGTGCAGAGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp ACGCTAGGTGGGCTGCGCGCTCTGCCAGGCGAAGGCTaGAGCGCAGACGGCAAAGCCGCGCGTTTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: TLGGLRALPGEG*SADGKAARFSR
Trigger: ACGGCTGAAACGCGCGGCTTTGCCGTCTGCGCTCCAGCCTTCGCCTGGCAGAGCGCGCAGCCCACCTAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 72 bp CCCCCGCCGGGCCGCCGGTGGAAGGAGACGGGTGGCTaGAGAGTTTCCAGCGGAGTCGCAGAATGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PPPGRRWKETGG*RVSSGVAECAS
Trigger: TGAAGCACATTCTGCGACTCCGCTGGAAACTCTTCAGCCACCCGTCTCCTTCCACCGGCGGCCCGGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp GCCCCGTGTTATGGCGAGGTGGGACAACCCTTAGGCTaGAGATGCGCGAGGGAGGGAGGTCTGAGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: APCYGEVGQPLG*RCAREGGLSAP
Trigger: CGGAGCGCTCAGACCTCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACACGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp GTGCACCTGCGCCCCTGTCCCTGGCCTTTTCGAGGATaGCCCGATAGCCTGCCGGGTGGCTCTGAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: VHLRPCPWPFRG*PDSLPGGSEKV
Trigger: GACTTTCTCAGAGCCACCCGGCAGGCTATCGGGGCATCCTCGAAAAGGCCAGGGACAGGGGCGCAGGTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp GGCAGGACTGGGACGCCAAAAGCTGAGAATCCTCGATaGCCGCGCGAGAGCCCCGTGTTATGGCGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: GRTGTPKAENPR*PRESPVLWRGG
Trigger: CCCACCTCGCCATAACACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCAGTCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 72 bp AGGCAGGAGCAGAGGCAGGACTGGGACGCCAAAAGCTaGGAATCCTCGATGCCCGCGCGAGAGCCCCGTGTT +
Preference number: 6 (lower is better)
Translates to: RQEQRQDWDAKS*ESSMPAREPRV
Trigger: AACACGGGGCTCTCGCGCGGGCATCGAGGATTCTCAGCTTTTGGCGTCCCAGTCCTGCCTCTGCTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp GAGAATCCTCGATGCCCGCGCGAGAGCCCCGTGTTATaGCGAGGTGGGACAACCCTTAGGCTGGAGATGCGC +
Preference number: 6 (lower is better)
Translates to: ENPRCPRESPVL*RGGTTLRLEMR
Trigger: GCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACACGGGGCTCTCGCGCGGGCATCGAGGATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp CCGGAGGCGGCTGCAGCTGGATACACCTCACTGGGATaGGCTTGTGGCAGAGCCTTAGTAGGGAAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PEAAAAGYTSLG*ACGRALVGKVV
Trigger: CACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp TGTTATGGCGAGGTGGGACAACCCTTAGGCTGGAGATaGGCGAGGGAGGGAGGTCTGAGCGCTCCGAAGCTC +
Preference number: 6 (lower is better)
Translates to: CYGEVGQPLGWR*AREGGLSAPKL
Trigger: GAGCTTCGGAGCGCTCAGACCTCCCTCCCTCGCGCATCTCCAGCCTAAGGGTTGTCCCACCTCGCCATAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp TGGCTTTTGAGCAGGCGACTCTGGCTGGGTCCCCAGTaGTCAAAGCTGCCACTGCCGTCCTGTTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: WLLSRRLWLGPQ*SKLPLPSCCRQ
Trigger: CTGCCTGCAACAGGACGGCAGTGGCAGCTTTGAGCACTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp CTGCCCAGGAGCCCCTTGCTGCAGCCTCGTGGCAACTaGAAGCAGGGTGCCATTCAGCGGATTGAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: LPRSPLLQPRGN*KQGAIQRIEGR
Trigger: TCTTCCTTCAATCCGCTGAATGGCACCCTGCTTCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp GGCGGCTGCAGCTGGATACACCTCACTGGGATGCGCTaGTGGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTT +
Preference number: 6 (lower is better)
Translates to: GGCSWIHLTGMR*WQSLSREGGGV
Trigger: AACGCCACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAGCTGCAGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp AGCTCCGGAGGCGGCTGCAGCTGGATACACCTCACTGGGATGCGCTaGTGGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTTCTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: SSGGGCSWIHLTGMR*WQSLSREGGGVLVL
Trigger: AAGGACAAGAACGCCACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCCCAGTGAGGTGTATCCAGCTGCAGCCGCCTCCGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp CCTGTCCCTGGCCTTTTCGAGGATGCCCCGATAGCCTaGCGGGTGGCTCTGAGAAAGTCAATTGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PVPGLFEDAPIA*RVALRKSIAFC
Trigger: GCAGAAAGCAATTGACTTTCTCAGAGCCACCCGGCAGGCTATCGGGGCATCCTCGAAAAGGCCAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp GGCTTCTTCCAGAAAGTGCTCACACCGCTTCTCTCTTaGCTTTTGAGCAGGCGACTCTGGCTGGGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GFFQKVLTPLLS*LLSRRLWLGPQ
Trigger: CTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTTCTGGAAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp GGATGCGCTTGTGGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTTCTaGTCCTTGCAGCTCAGAGTTCAGTGTCTGGAGAGCGCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: GCACGRALVGKVVAF*SLQLRVQCLESAER
Trigger: TCTCTCTGCGCTCTCCAGACACTGAACTCTGAGCTGCAAGGACAAGAACGCCACCACCTTCCCTACTAAGGCTCTGCCACAAGCGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp GAAGGCTTCTTCCAGAAAGTGCTCACACCGCTTCTCTCTTGGCTTTaGAGCAGGCGACTCTGGCTGGGTCCCCAGTGCTCAAAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: EGFFQKVLTPLLSWL*SRRLWLGPQCSKLP
Trigger: TGGCAGCTTTGAGCACTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTTCTGGAAGAAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp GAACCAGCCCTTTTTCGTGTGGTCCAGGAAAGTCCATaGCTGGCACCACCTCCTCCTCTAGTGACTCCACGT +
Preference number: 6 (lower is better)
Translates to: EPALFRVVQESP*LAPPPPLVTPR
Trigger: ACGTGGAGTCACTAGAGGAGGAGGTGGTGCCAGGCATGGACTTTCCTGGACCACACGAAAAAGGGCTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp AGGCTTCTTCCAGAAAGTGCTCACACCGCTTCTCTCTaGGCTTTTGAGCAGGCGACTCTGGCTGGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: RLLPESAHTASL*AFEQATLAGSP
Trigger: TGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTTCTGGAAGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp GGGTGGCTGAAGAGTTTCCAGCGGAGTCGCAGAATGTaGTTCACATCGAAGTCTTTTCGCCCAGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: GWLKSFQRSRRM*FTSKSFRPEPD
Trigger: GTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGCGACTCCGCTGGAAACTCTTCAGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp CACTTTGAGCTCTTGCAGAACCAGCCCTTTTTCGTGTaGTCCAGGAAAGTCCATGCCTGGCACCACCTCCTC +
Preference number: 6 (lower is better)
Translates to: HFELLQNQPFFV*SRKVHAWHHLL
Trigger: GAGGAGGTGGTGCCAGGCATGGACTTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp TGTGGCAGAGCCTTAGTAGGGAAGGTGGTGGCGTTCTaGTCCTTGCAGCTCAGAGTTCAGTGTCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: CGRALVGKVVAF*SLQLRVQCLES
Trigger: GCTCTCCAGACACTGAACTCTGAGCTGCAAGGACAAGAACGCCACCACCTTCCCTACTAAGGCTCTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 72 bp AGGAAGTGGCAGCACACTTCCACCACCTGTGGAAGCTaGAGAAGGCACGCTGCAGCAAGAAGGTTCTCAATG +
Preference number: 6 (lower is better)
Translates to: RKWQHTSTTCGS*RRHAAARRFSM
Trigger: CATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAGCTTCCACAGGTGGTGGAAGTGTGCTGCCACTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp GCCTGGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTaGAGAACCAGCCCTTTTTCGTGTGGTCCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: AWLELSGSTLSS*RTSPFSCGPGK
Trigger: CTTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp GATGACAGCCTGTGTCCACATCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: DDSLCPHPSPVA*LELSGSTLSSC
Trigger: GCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CAA 72 bp CTGTGTCCACATCCTTCACCTGTTGCCTGGCTAGAGTaGTCTGGCTCCACTTTGAGCTCTTGCAGAACCAGC +
Preference number: 6 (lower is better)
Translates to: LCPHPSPVAWLE*SGSTLSSCRTS
Trigger: GCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp TTCACCTGTTGCCTGGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTaGCAGAACCAGCCCTTTTTCGTGTGGTCCAGGAAAGTCCATGCC +
Preference number: 6 (lower is better)
Translates to: FTCCLARVVWLHFEL*QNQPFFVWSRKVHA
Trigger: GGCATGGACTTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp GATGACAGCCTGTGTCCACATCCTTCACCTGTTGCCTGGCTAGAGTaGTCTGGCTCCACTTTGAGCTCTTGCAGAACCAGCCCTTTTTCG +
Preference number: 6 (lower is better)
Translates to: DDSLCPHPSPVAWLE*SGSTLSSCRTSPFS
Trigger: CGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS GCA 72 bp GCTTCACATCGAAGTCTTTTCGCCCAGAGCCTGACATaGTTTACGCACAGAAGGCAAAAGGCTGGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: ASHRSLFAQSLT*FTHRRQKAGSS
Trigger: TGAGCTGCCAGCCTTTTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS GCA 72 bp ACTCAGAACAAGCCTGTGTCCACATCCTTCACCTGTTaGCTGGCTAGAGTTGTCTGGCTCCACTTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: TQNKPVSTSFTC*LARVVWLHFEL
Trigger: GAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTTGTTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS CCA 72 bp TCCACATCCTTCACCTGTTGCCTGGCTAGAGTTGTCTaGCTCCACTTTGAGCTCTTGCAGAACCAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: STSFTCCLARVV*LHFELLQNQPF
Trigger: AAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp AGAACAAGCCTGTGTCCACATCCTTCACCTGTTGCCTaGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RTSLCPHPSPVA*LELSGSTLSSC
Trigger: GCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS CAA 72 bp TGCCTGGCTAGAGTTGTCTGGCTCCACTTTGAGCTCTaGCAGAACCAGCCCTTTTTCGTGTGGTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: CLARVVWLHFEL*QNQPFFVWSRK
Trigger: TTTCCTGGACCACACGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp AGAACAAGCCTGTGTCCACATCCTTCACCTGTTGCCTGGCTAGAGTaGTCTGGCTCCACTTTGAGCTCTTGCAGAACCAGCCCTTTTTCG +
Preference number: 6 (lower is better)
Translates to: RTSLCPHPSPVAWLE*SGSTLSSCRTSPFS
Trigger: CGAAAAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTGGACACAGGCTTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545028.2
CDS TCA 72 bp ATTGAAGGAAGAGGAGGAAGAGGACGGGGAGGACGATaGAGAGGAAGAGGAGGAAGGCTTCTTCCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: IEGRGGRGRGGR*RGRGGRLLPES
Trigger: ACTTTCTGGAAGAAGCCTTCCTCCTCTTCCTCTTCATCGTCCTCCCCGTCCTCTTCCTCCTCTTCCTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS TCA 72 bp AATGTGCTTCACATCGAAGTCTTTTCGCCCAGAGCCTaGCATGCTTTACGCACAGAAGGCAAAAGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: NVLHIEVFSPRA*HALRTEGKRLA
Trigger: TGCCAGCCTTTTGCCTTCTGTGCGTAAAGCATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp ATGTGGCCACTCCGACACCCCCTCTCCTCTTACACATaGGAGCACACATGTTCCACTTATTTGTATGAGGAT +
Preference number: 6 (lower is better)
Translates to: MWPLRHPLSSYT*EHTCSTYLYED
Trigger: ATCCTCATACAAATAAGTGGAACATGTGTGCTCCCATGTGTAAGAGGAGAGGGGGTGTCGGAGTGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp CAGAGCTACTGGAGTCCAAATCACTTTGAGGTGTCATaGAATGGCCGGTTGATGACAGCCTGTGTCCACATC +
Preference number: 6 (lower is better)
Translates to: QSYWSPNHFEVS*NGRLMTACVHI
Trigger: GATGTGGACACAGGCTGTCATCAACCGGCCATTCAATGACACCTCAAAGTGATTTGGACTCCAGTAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS GCA 72 bp CCATTGTGTAGCTGTGGGCCACCTTCATTAACTCAATaGATCCTTGAGCATCTGCGAAGGCTCGAATTCCTA +
Preference number: 6 (lower is better)
Translates to: PLCSCGPPSLTQ*ILEHLRRLEFL
Trigger: TAGGAATTCGAGCCTTCGCAGATGCTCAAGGATGCATTGAGTTAATGAAGGTGGCCCACAGCTACACAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp AGAATTCTTCAGAGCTACTGGAGTCCAAATCACTTTGAGGTGTCATaGAATGGCCGGTTGATGACAGCCTGTGTCCACATCCTTCACCTG +
Preference number: 6 (lower is better)
Translates to: RILQSYWSPNHFEVS*NGRLMTACVHILHL
Trigger: CAGGTGAAGGATGTGGACACAGGCTGTCATCAACCGGCCATTCAATGACACCTCAAAGTGATTTGGACTCCAGTAGCTCTGAAGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CAA 90 bp TGGGATCATATCTTTCTACATAATCCAGTAGCCGGGAACAGTGATTaGAAGCAGGAGCATCATGACCTCCTACTGCATAAAGAAAACCGT +
Preference number: 6 (lower is better)
Translates to: WDHIFLHNPVAGNSD*KQEHHDLLLHKENR
Trigger: ACGGTTTTCTTTATGCAGTAGGAGGTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGCTACTGGATTATGTAGAAAGATATGATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp CTTCAAGTACTGTTACACCTAGACCATGTCTGTGTGTaGACATTGGTGGTAAGACAGTCCATGTCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: LQVLLHLDHVCV*TLVVRQSMSWF
Trigger: AAACCAAGACATGGACTGTCTTACCACCAATGTCAACACACAGACATGGTCTAGGTGTAACAGTACTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp ATCTTTCTACATAATCCAGTAGCCGGGAACAGTGATTaGAAGCAGGAGCATCATGACCTCCTACTGCATAAA +
Preference number: 6 (lower is better)
Translates to: IFLHNPVAGNSD*KQEHHDLLLHK
Trigger: TTTATGCAGTAGGAGGTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGCTACTGGATTATGTAGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CCA 72 bp CATGATGAACAGCTTGATAGAATTCTTCAGAGCTACTaGAGTCCAAATCACTTTGAGGTGTCATTGAATGGC +
Preference number: 6 (lower is better)
Translates to: HDEQLDRILQSY*SPNHFEVSLNG
Trigger: GCCATTCAATGACACCTCAAAGTGATTTGGACTCCAGTAGCTCTGAAGAATTCTATCAAGCTGTTCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CAA 90 bp TGCAGGTATCTTTCGGTTCCCAACAATCAGGATAACATCACAAAGTaGCTGCTGCTTCAAATAACTTTCCATCTTTCTGAAGGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: CRYLSVPNNQDNITK*LLLQITFHLSEGLL
Trigger: GAGCAAACCTTCAGAAAGATGGAAAGTTATTTGAAGCAGCAGCAACTTTGTGATGTTATCCTGATTGTTGGGAACCGAAAGATACCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CAA 72 bp ATCTTTCCAAGTAAAATATCAATAAGTCAAGGTTGCTaGATGACTACCACACAGGCACCTGCTCTCCCAATA +
Preference number: 6 (lower is better)
Translates to: IFPSKISISQGC*MTTTQAPALPI
Trigger: TATTGGGAGAGCAGGTGCCTGTGTGGTAGTCATCAAGCAACCTTGACTTATTGATATTTTACTTGGAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 90 bp ACAAAGTTGCTGCTGCTTCAAATAACTTTCCATCTTTCTGAAGGTTaGCTCAGCATGATGAACAGCTTGATAGAATTCTTCAGAGCTACT +
Preference number: 6 (lower is better)
Translates to: TKLLLLQITFHLSEG*LSMMNSLIEFFRAT
Trigger: AGTAGCTCTGAAGAATTCTATCAAGCTGTTCATCATGCTGAGCAAACCTTCAGAAAGATGGAAAGTTATTTGAAGCAGCAGCAACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS GCA 72 bp CCGACTGTAGATTTTCTGGGTTTAGTTCTCGGACTTTaGATTAAAGTTCTTCTTTCTGGCAATAGATGGTAT +
Preference number: 6 (lower is better)
Translates to: PTVDFLGLVLGL*IKVLLSGNRWY
Trigger: ATACCATCTATTGCCAGAAAGAAGAACTTTAATGCAAAGTCCGAGAACTAAACCCAGAAAATCTACAGTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2
CDS CAA 72 bp CTGCTGCTTCAAATAACTTTCCATCTTTCTGAAGGTTaGCTCAGCATGATGAACAGCTTGATAGAATTCTTC +
Preference number: 6 (lower is better)
Translates to: LLLQITFHLSEG*LSMMNSLIEFF
Trigger: GAAGAATTCTATCAAGCTGTTCATCATGCTGAGCAAACCTTCAGAAAGATGGAAAGTTATTTGAAGCAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377844.9
CDS CCA 72 bp TTGACATTGGTGGTAAGACAGTCCATGTCTTGGTTTTaGGATTGTAACATTCAACAGTGTTCAATGTCTTTA +
Preference number: 6 (lower is better)
Translates to: LTLVVRQSMSWF*DCNIQQCSMSL
Trigger: TAAAGACATTGAACACTGTTGAATGTTACAATCCCAAAACCAAGACATGGACTGTCTTACCACCAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377844.9
ENST00000545028.2