Pregenerated sensors for KLHDC8B (Homo sapiens)
Ensembl gene IDs: ENSG00000185909Ensembl transcript IDs: ENST00000332780.4, ENST00000459846.6, ENST00000462582.1, ENST00000471811.1, ENST00000476495.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGTGTAGAGGGCTCAAAGCCAGCATTCCTCCACTTGAACTCCTaGGCTCCGGCCCTCTGGCAGTTCCCACATCCTCTCTATTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SSVEGSKPAFLHLNS*APALWQFPHPLYSL Trigger: GAGAGAATAGAGAGGATGTGGGAACTGCCAGAGGGCCGGAGCGCAGGAGTTCAAGTGGAGGAATGCTGGCTTTGAGCCCTCTACACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR CCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTaGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: TLKAAWQLRFFRNGN*GRPGQLQIGTDPEE Trigger: CTCTTCAGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR TCA 90 bp | AGGCCTAGTAGGTCCCAGGGCAAGGATGGAGCTAGGCATGATTCATaGACGAATGGTGATAAAGGTAGGTGTAAGCATATGTGTGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: RPSRSQGKDGARHDS*TNGDKGRCKHMCVL Trigger: CAGGACACACATATGCTTACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGCCCTGGGACCTACTAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR GCA 90 bp | CATGAACGAATGGTGATAAAGGTAGGTGTAAGCATATGTGTGTCCTaGACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: HERMVIKVGVSICVS*TKDKGSPNPRPQGS Trigger: ACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACACATATGCTTACACCTACCTTTATCACCATTCGTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR CAA 90 bp | CATACAACCAGCAGTGTAGAGGGCTCAAAGCCAGCATTCCTCCACTaGAACTCCTGCGCTCCGGCCCTCTGGCAGTTCCCACATCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HTTSSVEGSKPAFLH*NSCAPALWQFPHPL Trigger: GAGAGGATGTGGGAACTGCCAGAGGGCCGGAGCGCAGGAGTTCAAGTGGAGGAATGCTGGCTTTGAGCCCTCTACACTGCTGGTTGTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGAATGAGCTGCTCCAGTaGACAGCTCCCACCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRNELLQ*TAPTKP Trigger: AGGCTTGGTGGGAGCTGTCCACTGGAGCAGCTCATT...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTAGGGTAGGAAGGTTTCAGAGATCCCCATTTATAGATGAGGATGCTGAGAGCTGCCTCTGGCAATaGGCTGCTCCAGTGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: VGRVGRFQRSPFIDEDAESCLWQ*AAPVDS Trigger: GCTGTCCACTGGAGCAGCTCATTGCCAGAGGCAGCT...CTCAGCATCCTCATCTATAAATGGGGATCTCTGAAACCTTCCTACCCTACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTTCCCCATTTCCCAGTTaGATGGAAGGCCTAGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPSPFPS*MEGLVG Trigger: ACCTACTAGGCCTTCCATCCAACTGGGAAATGGGGA...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR GCA 72 bp | GAGGGCTCAAAGCCAGCATTCCTCCACTTGAACTCCTaGGCTCCGGCCCTCTGGCAGTTCCCACATCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: EGSKPAFLHLNS*APALWQFPHPL Trigger: GAGAGGATGTGGGAACTGCCAGAGGGCCGGAGCGCAGGAGTTCAAGTGGAGGAATGCTGGCTTTGAGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR CCA 72 bp | GCATTCCTCCACTTGAACTCCTGCGCTCCGGCCCTCTaGCAGTTCCCACATCCTCTCTATTCTCTCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AFLHLNSCAPAL*QFPHPLYSLCV Trigger: GACACAGAGAGAATAGAGAGGATGTGGGAACTGCCAGAGGGCCGGAGCGCAGGAGTTCAAGTGGAGGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR CCA 72 bp | GCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTaGGGTAGGCCTGGTCAACTCCAGATAGGAACTGAC | + |
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Preference number: 3 (lower is better) Translates to: AAWQLRFFRNGN*GRPGQLQIGTD Trigger: GTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| 3UTR TCA 72 bp | AGGTCCCAGGGCAAGGATGGAGCTAGGCATGATTCATaGACGAATGGTGATAAAGGTAGGTGTAAGCATATG | + |
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Preference number: 3 (lower is better) Translates to: RSQGKDGARHDS*TNGDKGRCKHM Trigger: CATATGCTTACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGCCCTGGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTCCGCCGGTGCTCCGATaGTGCCAGGGTACGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVPPVLR*CQGTGS Trigger: GGACCCCGTACCCTGGCAGCATCGGAGCACCGGCGG...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTCTGCTTGAGGGAGGGTaGCCCGACGCTCCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGLLEGG*PDAPSG Trigger: GCCGCTGGGAGCGTCGGGCCACCCTCCCTCAAGCAG...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTCCTCCACGGCTTGACTaGGGCCCTGGGCCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVPPRLD*GPGPHP Trigger: GGGGTGTGGCCCAGGGCCCCAGTCAAGCCGTGGAGG...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR TCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCGTTCCGCCTCCGTTaGCGCGGGATCTGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRPFRLR*RGIWLG Trigger: CCCCAGCCAGATCCCGCGTCAACGGAGGCGGAACGG...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR TCA 90 bp | GCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTTCAAGTGACCCCCATGGCTGCTTaGGGGAGGGTGGCCCGACGC | + |
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Preference number: 4 (lower is better) Translates to: ALKTKAPLTQGPKAVFQVTPMAA*GRVARR Trigger: GCGTCGGGCCACCCTCCCTCAAGCAGCCATGGGGGT...CACTTGAAACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCGGTGCTCCGATGCTaGCAGGGTACGGGGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRPVLRC*QGTGSA Trigger: GGCGGACCCCGTACCCTGGCAGCATCGGAGCACCGG...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTGGGCAGGGGTGCCAGTaGCAGCCATGTGTGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGGQGCQ*QPCVRG Trigger: GCCTCGCACACATGGCTGGCACTGGCACCCCTGCCC...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTGGGCATGGCAGGCAATaGCTCCCAGCGCCGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPGHGRQ*LPAPPC Trigger: GCACGGCGGCGCTGGGAGGCATTGCCTGCCATGCCC...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGCAAAGGCCCGACGGCTaGGTAGGCTTGGATGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVQRPDG*VGLDAG Trigger: CCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTG...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGCTCCCAGCGCCGCCGTaGAAGGCTAAAGCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVLPAPP*KAKALH Trigger: GTGGAGAGCTTTAGCCTTGCACGGCGGCGCTGGGAG...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTCCCGTGCAGGAAGGTaGAGGCCCCATAGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVSRAGR*RPHSRV Trigger: CACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGA...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTCGCTGCCTTCAGCCATaGCGCAGCCAGCAAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGRCLQP*RSQQRP Trigger: GGGCCTTTGCTGGCTGCGCCATGGCTGAAGGCAGCG...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTGCCTTCACCCGCCGGTaGTCCGATGCTGCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPAFTRR*SDAARV Trigger: TACCCTGGCAGCATCGGAGCACCGGCGGGTGAAGGC...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTTCAAGTGCAGAACTACCGCAGCTaGACCAGCCCGGGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALKTKAPLTQGPKAVFQVQNYRS*TSPGSG Trigger: CCCACTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTG...CACTTGAAACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGTGCAACCCCCATGGCTaGTTGAGGGAGGGTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRCNPHG*LREGGP Trigger: CGGGCCACCCTCCCTCAAGCAGCCATGGGGGTTGCA...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTCCCTCATGCGCAGGCTaGGGGGCAATTTGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVPSCAG*GAIWSR Trigger: CCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGG...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAACACCAGCCCGGGCAGTaGGCAGGGGTGCCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQHQPGQ*AGVPVP Trigger: TGGCACTGGCACCCCTGCCCACTGCCCGGGCTGGTG...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGGGCTGCGGGGCAATTTaGTCCAGGACCCATGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVGCGAI*SRTHAP Trigger: TGGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCC...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAAGTGCCTCCACGGCTTaGCTGGGGCCCTGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQSASTA*LGPWAT Trigger: TGTGGCCCAGGGCCCCAGTCAAGCCGTGGAGGCACT...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR TCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTAGCTGCCTCTGGCAATaGGCTGCTCCAGTGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGSCLWQ*AAPVDS Trigger: GCTGTCCACTGGAGCAGCTCATTGCCAGAGGCAGCT...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGGTGCCCATCTTGGTGTaGCACTGTGCCATAGACCCG | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVVPILV*HCAIDP Trigger: CGGGTCTATGGCACAGTGGCACACCAAGATGGGCAC...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGCCCAACACCAGCAGGTaGCCATCTTGGTGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVPNTSR*PSWCAT Trigger: AGTGGCACACCAAGATGGGCACCTGCTGGTGTTGGG...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGGGCAGTGGGCAGGGGTaGCAGTGCCAGCCATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SAAKGAIEIAASGNELLQGSGQG*QCQPCV Trigger: CACACATGGCTGGCACTGGCACCCCTGCCCACTGCC...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGATCACGCAGACACAGTaGCTCCACGGCTTGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: VCPALKTKAPLTQGPKAVITQTQ*LHGLTG Trigger: CCCAGTCAAGCCGTGGAGGCACTGTGTCTGCGTGAT...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTCCCACCACTAGCACCTaGTTGCCCAGAACTACCGCA | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVPTTST*LPRTTA Trigger: TGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGG...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGCTGGGTAGGCTTGGATaGCGGGTCCATGTACGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAAKGAIEIAASGNELLQLGRLG*RVHVRA Trigger: GGCCCGTACATGGACCCGGCATCCAAGCCTACCCAG...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGGACTGTAGGCCTCACTaGGGAGGCATGACAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRDCRPH*GGMTGP Trigger: AGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTC...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTGGTGTTCACTGCCAGTaGCAGGCCATGCTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVGVHCQ*QAMLSA Trigger: AGCAGACAGCATGGCCTGCCACTGGCAGTGAACACC...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR TCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTGCCACAAGAGGTATATaGCCAGTCCAGGGACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGATRGI*PVQGPC Trigger: GCAAGGTCCCTGGACTGGTCATATACCTCTTGTGGC...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR GCA 90 bp | GCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTTCAAGTGCCCTCTTATCCCTCATaGGCAGGCTGCGGGGCAATT | + |
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Preference number: 4 (lower is better) Translates to: ALKTKAPLTQGPKAVFQVPSYPS*AGCGAI Trigger: AATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGG...CACTTGAAACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRPHSRV*AWRVAK Trigger: TTTCGCTACCCTCCATGCCCACACCCTGCTATGGGG...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTCCCAAAGGACATGGCTaGTTTCCAAGGCCCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVPKGHG*FPRPPM Trigger: CATTGGGGGCCTTGGAAACCAGCCATGTCCTTTGGG...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTAATGAGCTGCTCCAGTaGACAGCTCCCACCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGNELLQ*TAPTKP Trigger: AGGCTTGGTGGGAGCTGTCCACTGGAGCAGCTCATT...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGCGCTCCGGCCCTCTaGCAGTTCCCACATCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQCAPAL*QFPHPL Trigger: GAGAGGATGTGGGAACTGCCAGAGGGCCGGAGCGCA...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTCACATCCAAACTCCCTaGGTCCTCACAACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGHIQTP*VLTTAL Trigger: CAGGGCTGTTGTGAGGACCCAGGGAGTTTGGATGTG...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR TCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCTCACTGGGGAGGCATaGCAGGGCCTCATCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRLTGEA*QGLILI Trigger: AATCAAGATGAGGCCCTGTCATGCCTCCCCAGTGAG...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTAGACATGGTGTTCACTaGCAGTGGCAGGCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPRHGVH*QWQAML Trigger: CAGCATGGCCTGCCACTGGCAGTGAACACCATGTCT...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGCCACTAGCACCTGCTTaGCCAGAACTACCGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAAKGAIEIAASGNELLQPLAPA*PELPQL Trigger: CAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGG...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTAAAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCACCTCCTGCAGACATaGTGTTCACTGCCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKAAWQLRFFRNGNWGRHLLQT*CSLPVA Trigger: TGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTG...CCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTACATCTCCACAGTGTTaGCAAAGTGTGGGCGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVTSPQC*QSVGES Trigger: ACTCTCGCCCACACTTTGTCAACACTGTGGAGATGT...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTACCAGTCCAGGGACCTTaGCTTCACCCGCCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVPVQGP*LHPPVL Trigger: GAGCACCGGCGGGTGAAGGCAAGGTCCCTGGACTGG...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAGCAGGCCATGCTGTCTaGTCAGACTGTAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQAGHAV*SDCRPH Trigger: GTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGC...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGTAGGGTAGGAAGGTTTCAGAGATCCCCATTTATAGATGAGGATGCTGAGGGCCCGGCCACCTCCTaGAGACATGGTGTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRVGRFQRSPFIDEDAEGPATS*RHGVHC Trigger: GCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCC...CTCAGCATCCTCATCTATAAATGGGGATCTCTGAAACCTTCCTACCCTACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTTTGGTCCAGGACCCATaGTCCAGGTCAAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPLVQDP*SRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGGTCCTGGACCAA...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTTTCAGGAATGGCAACTaGGGTAGGCCTGGTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPFRNGN*GRPGQL Trigger: GAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGCCCAACCACAAAGTCTaGCCTCTTATCCCTCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAAKGAIEIAASGNELLQPNHKV*PLIPHA Trigger: CGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGG...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GTAGGTAGGGTAGGAAGGTTTCAGAGATCCCCATTTATAGATGAGGATGCTGAGCAGTTGCAACCCCCATaGCTGCTTGAGGGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRVGRFQRSPFIDEDAEQLQPP*LLEGGW Trigger: CCACCCTCCCTCAAGCAGCCATGGGGGTTGCAACTG...CTCAGCATCCTCATCTATAAATGGGGATCTCTGAAACCTTCCTACCCTACCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGTAGGGTAGGAAGGTTTCAGAGATCCCCATTTATAGATGAGGATGCTGAGAGTGCCAGCCATGTGTaGGAGGCCATGTCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRVGRFQRSPFIDEDAESASHV*EAMSSV Trigger: GACACTGGACATGGCCTCGCACACATGGCTGGCACT...CTCAGCATCCTCATCTATAAATGGGGATCTCTGAAACCTTCCTACCCTACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAATCTCTCTCCACAGTTaGAACCCCCATGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQISLHS*NPHGCL Trigger: CAAGCAGCCATGGGGGTTGCAACTGTGGAGAGAGAT...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAAGGCAGTGTTTCAAGTaGTCACCCCCATGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQRQCFK*SPPCLS Trigger: AGAGAGGCATGGGGGTGAGCACTTGAAACACTGCCT...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGTAGGGTAGGAAGGTTTCAGAGATCCCCATTTATAGATGAGGATGCTGAGCAACTCTCCTGGGTCTaGAGGGACCCTAAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRVGRFQRSPFIDEDAEQLSWV*RDPKGS Trigger: GCTGCCTTTAGGGTCCCTGCAGACCCAGGAGAGTTG...CTCAGCATCCTCATCTATAAATGGGGATCTCTGAAACCTTCCTACCCTACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTAAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVSRVWA*RVAKAS Trigger: GCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCT...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTACCAATGGCCACAATGTaGCCCCCAAGGGACCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVPMATM*PPRDPT Trigger: GGTTGGGTCCCTTGGGGGCCACATTGTGGCCATTGG...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR TCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTAGACAGGGCCTCATCTTaGTTCTGCCAGGGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVDRASS*FCQGHK Trigger: CTTGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTC...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTATTCCAAGGCCCCCAATaGCCACAATGTGGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVFQGPQ*PQCGPQ Trigger: TTGGGGGCCACATTGTGGCCATTGGGGGCCTTGGAA...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTAAGAGCCCAAAGGACATaGCTGGTTTCCAAGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVRAQRT*LVSKAP Trigger: GGGGGCCTTGGAAACCAGCCATGTCCTTTGGGCTCT...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGAGTGTTGACAAAGTGTaGGCGAGAGTAGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAAKGAIEIAASGNELLQSVDKV*ARVEVV Trigger: CACAACTTCTACTCTCGCCCACACTTTGTCAACACT...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTATCCCCATTTCCCAGTTaGATGGAAGGCCTAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVSPFPS*MEGLVG Trigger: ACCTACTAGGCCTTCCATCCAACTGGGAAATGGGGA...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTAACCCTAAAGGCAGCCTaGCAGCTGAGATTTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVTLKAA*QLRFFR Trigger: CCTGAAAAATCTCAGCTGCCAGGCTGCCTTTAGGGT...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR TCA 90 bp | GCAAGGATGGAGCTAGGCATGATTCATGAACGAATGGTGATAAAGGTAGGTGTAGCTAGGCATGATTCATaGACGAATGGTGATAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARMELGMIHERMVIKVGVARHDS*TNGDKG Trigger: ACCTTTATCACCATTCGTTCATGAATCATGCCTAGC...TACACCTACCTTTATCACCATTCGTTCATGAATCATGCCTAGCTCCATCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS GCA 90 bp | GCCCAGAACTACCGCAGCTGCACCAGCCCGGGCAGTGGGCAGGGGTaGCAGTGCCAGCCATGTGTGCGAGGCCATGTCCAGTGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQNYRSCTSPGSGQG*QCQPCVRGHVQCLS Trigger: GCTGAGACACTGGACATGGCCTCGCACACATGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 90 bp | CCGGGCTCTGGACCTCATCCACACCACCCACCACTAGCACCTGCTTaGCCAGAACTACCGCAGCTGCACCAGCCCGGGCAGTGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGPHPHHPPLAPA*PELPQLHQPGQWAG Trigger: CCCTGCCCACTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAGCCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 90 bp | GCTACCGGGCTCTGGACCTCATCCACACCACCCACCACTAGCACCTaGTTGCCCAGAACTACCGCAGCTGCACCAGCCCGGGCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATGLWTSSTPPTTST*LPRTTAAAPARAVG Trigger: GCCCACTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAGCCCGGTAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
||
| CDS GCA 90 bp | CTTGGGAGGCCACTCACCTCTCTCCACAGTTGCAACCCCCATGGCTaGTTGAGGGAGGGTGGCCCGACGCTCCCAGCGGCCCTCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGRPLTSLHSCNPHG*LREGGPTLPAALIH Trigger: ATGGATGAGGGCCGCTGGGAGCGTCGGGCCACCCTCCCTCAAGCAGCCATGGGGGTTGCAACTGTGGAGAGAGGTGAGTGGCCTCCCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476495.2 |
||
| CDS CCA 90 bp | AGACGCTGCCTTCAGCCATGGCGCAGCCAGCAAAGGCCCGACGGCTaGGTAGGCTTGGATGCCGGGTCCATGTACGGGCCTCCAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRCLQPWRSQQRPDG*VGLDAGSMYGPPDQ Trigger: TTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTGCGCCATGGCTGAAGGCAGCGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS GCA 90 bp | GGCCCCCAAGGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATaGGCAGGCTGCGGGGCAATTTGGTCCAGGACCCTGCAGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPQGTQPQSLPSYPS*AGCGAIWSRTLQER Trigger: CCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471811.1 |
||
| CDS CCA 90 bp | TGTTCCCGTGCAGGAAGGTGGAGGCCCCATAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGCAGTCCCGACGGGGCTCATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: CSRAGRWRPHSRVWA*RVAKASSPDGAHTH Trigger: GTGTGTATGAGCCCCGTCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGGCCGTTCCGCCTCCGTaGACGCGGGATCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCPALKTKAPLTQGPKAVAVPPP*TRDLAG Trigger: CCCAGCCAGATCCCGCGTCAACGGAGGCGGAACGGC...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS GCA 90 bp | GCCATGGCGCAGCCAGCAAAGGCCCGACGGCTGGGTAGGCTTGGATaGCGGGTCCATGTACGGGCCTCCAGATCAAAGGCTTCAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AMAQPAKARRLGRLG*RVHVRASRSKASKA Trigger: TGCTTTTGAAGCCTTTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTGCGCCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
||
| CDS GCA 90 bp | GGCCCCCAAGGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATaGGCAGGCTGCGGGGCAATTTGGTCCAGGACCCATGCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPQGTQPQSLPSYPS*AGCGAIWSRTHAPG Trigger: ACCTGGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
||
| CDS GCA 90 bp | GGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATGCGCAGGCTaGGGGGCAATTTGGTCCAGGACCCTGCAGGAGAGGGGAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTQPQSLPSYPSCAG*GAIWSRTLQERGGQ Trigger: CTGACCTCCCCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471811.1 |
||
| CDS CCA 90 bp | CGGCCCTCATCCATCAGGAAGGCCTCTACAGCAGCTACCGGGCTCTaGACCTCATCCACACCACCCACCACTAGCACCTGCTTGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSSIRKASTAATGL*TSSTPPTTSTCLPR Trigger: TCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAGCCCGGTAGCTGCTGTAGAGGCCTTCCTGATGGATGAGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
||
| CDS CCA 90 bp | AGATCTTGTTCCCGTGCAGGAAGGTGGAGGCCCCATAGCAGGGTGTaGGCATGGAGGGTAGCGAAAGCCAGCAGTCCCGACGGGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSCSRAGRWRPHSRV*AWRVAKASSPDGAH Trigger: ATGAGCCCCGTCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACAAGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
||
| CDS CCA 90 bp | CTGCCAGTGGCAGGCCATGCTGTCTGCTCAGACTGTAGGCCTCACTaGGGAGGCATGACAGGGCCTCATCTTGATTCTGCCAGGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVAGHAVCSDCRPH*GGMTGPHLDSARAT Trigger: TGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
||
| CDS CCA 90 bp | GGGGGAACACTTGCCAAGCAAAGGCCCGGCCACCTCCTGCAGACATaGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTGCTCAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGTLAKQRPGHLLQT*CSLPVAGHAVCSDC Trigger: ACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGGCAAGTGTTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGACCAGTCCAGGGACCTaGCCTTCACCCGCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VCPALKTKAPLTQGPKAVTSPGT*PSPAGA Trigger: AGCACCGGCGGGTGAAGGCAAGGTCCCTGGACTGGT...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS GCA 90 bp | CTCCTGCAGACATGGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTaGTCAGACTGTAGGCCTCACTGGGGAGGCATGACAGGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQTWCSLPVAGHAV*SDCRPHWGGMTGPH Trigger: ATGAGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
||
| CDS GCA 90 bp | TTGCCAAGCAAAGGCCCGGCCACCTCCTGCAGACATGGTGTTCACTaGCAGTGGCAGGCCATGCTGTCTGCTCAGACTGTAGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LPSKGPATSCRHGVH*QWQAMLSAQTVGLT Trigger: AGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
||
| CDS GCA 90 bp | CCCAATGGCCACAATGTGGCCCCCAAGGGACCCAACCACAAAGTCTaGCCTCTTATCCCTCATGCGCAGGCTGCGGGGCAATTTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PNGHNVAPKGPNHKV*PLIPHAQAAGQFGP Trigger: TGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCCACATTGTGGCCATTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 |
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| CDS GCA 90 bp | CCATCAAGCAAAGGCCCGGCCACCTCCTGCAGACATGGTGTTCACTaGCAGTGGCAGGCCATGCTGTCTGCTCAGACTGTAGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PSSKGPATSCRHGVH*QWQAMLSAQTVGLT Trigger: AGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459846.6 |
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| CDS GCA 90 bp | GACCCTGCAGGAGAGGGGAGGTCAGATCTAGTCATGTACACACTATaGCCCTCCATCCCACAGAGAGCGGGAGGACAGCCCAGAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DPAGEGRSDLVMYTL*PSIPQRAGGQPRTA Trigger: GGCTGTTCTGGGCTGTCCTCCCGCTCTCTGTGGGATGGAGGGGCATAGTGTGTACATGACTAGATCTGACCTCCCCTCTCCTGCAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGAATGGCAACTGGGGTAGGCCTGGTCAACTCCAGATAGGAACTGACCCTAACCCCCATGGCTGCTaGAGGGAGGGTGGCCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: FRNGNWGRPGQLQIGTDPNPHGC*REGGPT Trigger: CGTCGGGCCACCCTCCCTCAAGCAGCCATGGGGGTT...AGGGTCAGTTCCTATCTGGAGTTGACCAGGCCTACCCCAGTTGCCATTCCTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATGAGCTGCTCCAGCAGTGCCTCCACGGCTaGACTGGGGCCCTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SAAKGAIEIAASGNELLQQCLHG*TGALGH Trigger: GTGGCCCAGGGCCCCAGTCAAGCCGTGGAGGCACTG...CTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS TCA 90 bp | ATGACAGGGCCTCATCTTGATTCTGCCAGGGCCACAAGAGGTATATaGCCAGTCCAGGGACCTTGCCTTCACCCGCCGGTGCTCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: MTGPHLDSARATRGI*PVQGPCLHPPVLRC Trigger: GCATCGGAGCACCGGCGGGTGAAGGCAAGGTCCCTGGACTGGTCATATACCTCTTGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
||
| CDS GCA 90 bp | CCCAGAGCATACACCATACCATCAAGCAAAGGCCCGGCCACCTCCTaGAGACATGGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRAYTIPSSKGPATS*RHGVHCQWQAMLSA Trigger: AGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGATGGTATGGTGTATGCTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459846.6 |
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| CDS CCA 90 bp | CCCAAAGGACATGGCTGGTTTCCAAGGCCCCCAATGGCCACAATGTaGCCCCCAAGGGACCCAACCACAAAGTCTGCCCTCTTATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKGHGWFPRPPMATM*PPRDPTTKSALLSL Trigger: GAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCCACATTGTGGCCATTGGGGGCCTTGGAAACCAGCCATGTCCTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTGGCAGCTGAGATTTTTCAGGAATGGCAACTGGGGTAGGCCTGGTAGGCTGCGGGGCAATTaGGTCCAGGACCCATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KAAWQLRFFRNGNWGRPGRLRGN*VQDPCS Trigger: GGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCCT...ACCAGGCCTACCCCAGTTGCCATTCCTGAAAAATCTCAGCTGCCAGGCTGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS GCA 90 bp | GGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATGCGCAGGCTaGGGGGCAATTTGGTCCAGGACCCATGCTCCAGGTCAAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: GTQPQSLPSYPSCAG*GAIWSRTHAPGQTS Trigger: AGATGTTTGACCTGGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS GCA 90 bp | CCCACAGAGAGCGGGAGGACAGCCCAGAACAGCCACTGCTCACCATaGTCCAGGTCAAACATCTCCACAGTGTTGACAAAGTGTGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTESGRTAQNSHCSP*SRSNISTVLTKCGR Trigger: TCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGTGAGCAGTGGCTGTTCTGGGCTGTCCTCCCGCTCTCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS GCA 90 bp | CCCCTCCATCCCACAGAGAGCGGGAGGACAGCCCAGAACAGCCACTaGTCACCATGCTCCAGGTCAAACATCTCCACAGTGTTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLHPTESGRTAQNSH*SPCSRSNISTVLTK Trigger: CTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGTGAGCAGTGGCTGTTCTGGGCTGTCCTCCCGCTCTCTGTGGGATGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
||
| CDS GCA 90 bp | CTTATCCCTCATGCGCAGGCTGCGGGGCAATTTGGTCCAGGACCCTaGAGGAGAGGGGAGGTCAGATCTAGTCATGTACACACTATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPHAQAAGQFGPGP*RRGEVRSSHVHTMP Trigger: GGGCATAGTGTGTACATGACTAGATCTGACCTCCCCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS TCA 90 bp | CAGGCCATGCTGTCTGCTCAGACTGTAGGCCTCACTGGGGAGGCATaGCAGGGCCTCATCTTGATTCTGCCAGGGCCACAAGAGGTATAT | + |
|
Preference number: 5 (lower is better) Translates to: QAMLSAQTVGLTGEA*QGLILILPGPQEVY Trigger: ATATACCTCTTGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS CCA 90 bp | ATACACCATACCATCAAGCAAAGGCCCGGCCACCTCCTGCAGACATaGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTGCTCAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IHHTIKQRPGHLLQT*CSLPVAGHAVCSDC Trigger: ACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGATGGTATGGTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459846.6 |
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| CDS-3UTR CAA 90 bp | GTGTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGCATCTCTCTCCACAGTaGCAACCCCCATGGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCPALKTKAPLTQGPKAVHLSPQ*QPPWLL Trigger: AAGCAGCCATGGGGGTTGCAACTGTGGAGAGAGATG...CACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS TCA 90 bp | GTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAATaGGCTGCTCCAGTGGACAGCTCCCACCAAGCCTTCAGACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSKRSHRNSCLWQ*AAPVDSSHQAFRPH Trigger: ATGGGGTCTGAAGGCTTGGTGGGAGCTGTCCACTGGAGCAGCTCATTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000462582.1 |
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| CDS TCA 90 bp | ACAGCCACTGCTCACCATGCTCCAGGTCAAACATCTCCACAGTGTTaGCAAAGTGTGGGCGAGAGTAGAAGTTGTGGGGCCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TATAHHAPGQTSPQC*QSVGESRSCGAQAA Trigger: AGCAGCCTGGGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGTGAGCAGTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAGACGGCTGGGTAGGCTaGGATGCCGGGTCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQDGWVG*DAGSMY Trigger: GTACATGGACCCGGCATCCAAGCCTACCCAGCCGTC...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
||
| CDS TCA 90 bp | ATTTGGTCCAGGACCCATGCTCCAGGTCAAACATCTCCACAGTGTTaGCAAAGTGTGGGCGAGAGTAGAAGTTGTGGGGCCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IWSRTHAPGQTSPQC*QSVGESRSCGAQAA Trigger: AGCAGCCTGGGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGGTCCTGGACCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAACAGCAGGTGCCCATCTaGGTGTGCCACTGTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQQQVPI*VCHCAI Trigger: TATGGCACAGTGGCACACCAAGATGGGCACCTGCTG...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGTGTCCTCAGCAGCAAAAGGAGCCATAGAAATAGCTGCCTCTGGCAAACCACTAGCACCTGCTaGCCCAGAACTACCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSVLSSKRSHRNSCLWQTTSTC*PRTTAA Trigger: AGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGT...TTGCCAGAGGCAGCTATTTCTATGGCTCCTTTTGCTGCTGAGGACACTCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGCACTAAAGACAAAGGCTCCCCTAACCCAAGGCCCCAAGGCAGTGTTAACATCTCCACAGTGTaGACAAAGTGTGGGCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSCTKDKGSPNPRPQGSVNISTV*TKCGRE Trigger: CTCTCGCCCACACTTTGTCAACACTGTGGAGATGTT...AACACTGCCTTGGGGCCTTGGGTTAGGGGAGCCTTTGTCTTTAGTGCAGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS GCA 72 bp | GTCCAGGGACCTTGCCTTCACCCGCCGGTGCTCCGATaGTGCCAGGGTACGGGGTCCGCCGTTCCGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VQGPCLHPPVLR*CQGTGSAVPPP Trigger: CGGAGGCGGAACGGCGGACCCCGTACCCTGGCAGCATCGGAGCACCGGCGGGTGAAGGCAAGGTCCCTGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS TCA 72 bp | GCTGCCAGGGTACGGGGTCCGCCGTTCCGCCTCCGTTaGCGCGGGATCTGGCTGGGGCTGAAGTCGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AARVRGPPFRLR*RGIWLGLKSGS Trigger: AGAGCCCGACTTCAGCCCCAGCCAGATCCCGCGTCAACGGAGGCGGAACGGCGGACCCCGTACCCTGGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS GCA 72 bp | CAGGGACCTTGCCTTCACCCGCCGGTGCTCCGATGCTaGCAGGGTACGGGGTCCGCCGTTCCGCCTCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGPCLHPPVLRC*QGTGSAVPPPL Trigger: CAACGGAGGCGGAACGGCGGACCCCGTACCCTGGCAGCATCGGAGCACCGGCGGGTGAAGGCAAGGTCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS CAA 72 bp | TGCTGCCAGGGTACGGGGTCCGCCGTTCCGCCTCCGTaGACGCGGGATCTGGCTGGGGCTGAAGTCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCQGTGSAVPPP*TRDLAGAEVGL Trigger: GAGCCCGACTTCAGCCCCAGCCAGATCCCGCGTCAACGGAGGCGGAACGGCGGACCCCGTACCCTGGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS GCA 72 bp | AGCTGCACCAGCCCGGGCAGTGGGCAGGGGTGCCAGTaGCAGCCATGTGTGCGAGGCCATGTCCAGTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCTSPGSGQGCQ*QPCVRGHVQCL Trigger: GAGACACTGGACATGGCCTCGCACACATGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTGGTGCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 72 bp | CCACTCACCTCTCTCCACAGTTGCAACCCCCATGGCTaGTTGAGGGAGGGTGGCCCGACGCTCCCAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLTSLHSCNPHG*LREGGPTLPAA Trigger: GGCCGCTGGGAGCGTCGGGCCACCCTCCCTCAAGCAGCCATGGGGGTTGCAACTGTGGAGAGAGGTGAGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476495.2 |
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| CDS CAA 90 bp | ACCGGGCTCTGGACCTCATCCACACCACCCACCACTAGCACCTGCTaGCCCAGAACTACCGCAGCTGCACCAGCCCGGGCAGTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TGLWTSSTPPTTSTC*PRTTAAAPARAVGR Trigger: CCTGCCCACTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAGCCCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 72 bp | CCCACCAAGCCTTCAGACCCCATCACGCAGACACAGTaGCTCCACGGCTTGACTGGGGCCCTGGGCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: PTKPSDPITQTQ*LHGLTGALGHT Trigger: GGTGTGGCCCAGGGCCCCAGTCAAGCCGTGGAGGCACTGTGTCTGCGTGATGGGGTCTGAAGGCTTGGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000462582.1 |
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| CDS CCA 72 bp | GCAGGAAGGTGGAGGCCCCATAGCAGGGTGTGGGCATaGAGGGTAGCGAAAGCCAGCAGTCCCGACGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRWRPHSRVWA*RVAKASSPDGA Trigger: AGCCCCGTCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS CCA 72 bp | CTTCAGCCATGGCGCAGCCAGCAAAGGCCCGACGGCTaGGTAGGCTTGGATGCCGGGTCCATGTACGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQPWRSQQRPDG*VGLDAGSMYGP Trigger: AGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTGCGCCATGGCTGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS GCA 72 bp | GGACCTCATCCACACCACCCACCACTAGCACCTGCTTaGCCAGAACTACCGCAGCTGCACCAGCCCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPHPHHPPLAPA*PELPQLHQPGQ Trigger: CTGCCCGGGCTGGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 72 bp | CATACCATCTCTCTCCACAGTTGCAACCCCCATGGCTaGTTGAGGGAGGGTGGCCCGACGCTCCCAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTISLHSCNPHG*LREGGPTLPAA Trigger: GGCCGCTGGGAGCGTCGGGCCACCCTCCCTCAAGCAGCCATGGGGGTTGCAACTGTGGAGAGAGATGGTATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS GCA 72 bp | GCCACACCCCCAATAACAAACAGCCGGGGCCCAGCCTaGAGACTAGAGCAGGAGCAGCGGGCAGTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: ATPPITNSRGPA*RLEQEQRAVGM Trigger: CATGCCCACTGCCCGCTGCTCCTGCTCTAGTCTGCAGGCTGGGCCCCGGCTGTTTGTTATTGGGGGTGTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000462582.1 |
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| CDS CAA 72 bp | TGGCGCAGCCAGCAAAGGCCCGACGGCTGGGTAGGCTaGGATGCCGGGTCCATGTACGGGCCTCCAGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: WRSQQRPDGWVG*DAGSMYGPPDQ Trigger: TTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTGCGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS GCA 72 bp | CTCTGGACCTCATCCACACCACCCACCACTAGCACCTaGTTGCCCAGAACTACCGCAGCTGCACCAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LWTSSTPPTTST*LPRTTAAAPAR Trigger: CCGGGCTGGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 72 bp | CAGCCAGCAAAGGCCCGACGGCTGGGTAGGCTTGGATaGCGGGTCCATGTACGGGCCTCCAGATCAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPAKARRLGRLG*RVHVRASRSKA Trigger: AGCCTTTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS CAA 90 bp | CTTCAGCCATGGCGCAGCCAGCAAAGGCCCGACGGCTGGGTAGGCTaGGATGCCGGGTCCATGTACGGGCCTCCAGATCAAAGGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQPWRSQQRPDGWVG*DAGSMYGPPDQRLQ Trigger: TTGAAGCCTTTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGCCGTCGGGCCTTTGCTGGCTGCGCCATGGCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS GCA 72 bp | GGGGAACACTTGCCAAGCAAAGGCCCGGCCACCTCCTaGAGACATGGTGTTCACTGCCAGTGGCAGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GEHLPSKGPATS*RHGVHCQWQAM Trigger: CATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGGCAAGTGTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS GCA 72 bp | AGTGGGCATGGCAGGCAATGCCTCCCAGCGCCGCCGTaGAAGGCTAAAGCTCTCCACAGAGCCCAAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SGHGRQCLPAPP*KAKALHRAQRT Trigger: TGTCCTTTGGGCTCTGTGGAGAGCTTTAGCCTTGCACGGCGGCGCTGGGAGGCATTGCCTGCCATGCCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000462582.1 |
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| CDS CCA 72 bp | CTTGCCAAGCAAAGGCCCGGCCACCTCCTGCAGACATaGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAKQRPGHLLQT*CSLPVAGHAVC Trigger: GCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000476495.2 |
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| CDS CAA 72 bp | GCCCTCTTATCCCTCATGCGCAGGCTGCGGGGCAATTaGGTCCAGGACCCTGCAGGAGAGGGGAGGTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALLSLMRRLRGN*VQDPAGEGRSD Trigger: ATCTGACCTCCCCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471811.1 |
||
| CDS GCA 72 bp | CACAATGTGGCCCCCAAGGGACCCAACCACAAAGTCTaGCCTCTTATCCCTCATGCGCAGGCTGCGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HNVAPKGPNHKV*PLIPHAQAAGQ Trigger: TTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCCACATTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 |
||
| CDS GCA 72 bp | CCACAAAGTCTGCCCTCTTATCCCTCATGCGCAGGCTaGGGGGCAATTTGGTCCAGGACCCTGCAGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQSLPSYPSCAG*GAIWSRTLQER Trigger: CCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS GCA 72 bp | GGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATaGGCAGGCTGCGGGGCAATTTGGTCCAGGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTQPQSLPSYPS*AGCGAIWSRTL Trigger: CAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS CCA 72 bp | CATGGCTGGTTTCCAAGGCCCCCAATGGCCACAATGTaGCCCCCAAGGGACCCAACCACAAAGTCTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGWFPRPPMATM*PPRDPTTKSAL Trigger: GAGGGCAGACTTTGTGGTTGGGTCCCTTGGGGGCCACATTGTGGCCATTGGGGGCCTTGGAAACCAGCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332780.4 |
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| CDS CCA 72 bp | ACCATCAAGCAAAGGCCCGGCCACCTCCTGCAGACATaGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TIKQRPGHLLQT*CSLPVAGHAVC Trigger: GCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459846.6 |
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| CDS GCA 72 bp | CCACAAAGTCTGCCCTCTTATCCCTCATGCGCAGGCTaGGGGGCAATTTGGTCCAGGACCCATGCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PQSLPSYPSCAG*GAIWSRTHAPG Trigger: ACCTGGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS GCA 72 bp | GGGACCCAACCACAAAGTCTGCCCTCTTATCCCTCATaGGCAGGCTGCGGGGCAATTTGGTCCAGGACCCAT | + |
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Preference number: 6 (lower is better) Translates to: GTQPQSLPSYPS*AGCGAIWSRTH Trigger: ATGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS GCA 72 bp | CCCACAGAGAGCGGGAGGACAGCCCAGAACAGCCACTaGTCACCATGCTCCAGGTCAAACATCTCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: PTESGRTAQNSH*SPCSRSNISTV Trigger: CACTGTGGAGATGTTTGACCTGGAGCATGGTGAGCAGTGGCTGTTCTGGGCTGTCCTCCCGCTCTCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS GCA 72 bp | GGAGAGGGGAGGTCAGATCTAGTCATGTACACACTATaGCCCTCCATCCCACAGAGAGCGGGAGGACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GEGRSDLVMYTL*PSIPQRAGGQP Trigger: GGGCTGTCCTCCCGCTCTCTGTGGGATGGAGGGGCATAGTGTGTACATGACTAGATCTGACCTCCCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS CCA 72 bp | GCAGGCCATGCTGTCTGCTCAGACTGTAGGCCTCACTaGGGAGGCATGACAGGGCCTCATCTTGATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AGHAVCSDCRPH*GGMTGPHLDSA Trigger: GGCAGAATCAAGATGAGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS CAA 72 bp | GCCCTCTTATCCCTCATGCGCAGGCTGCGGGGCAATTaGGTCCAGGACCCATGCTCCAGGTCAAACATCTCC | + |
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Preference number: 6 (lower is better) Translates to: ALLSLMRRLRGN*VQDPCSRSNIS Trigger: GGAGATGTTTGACCTGGAGCATGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS CAA 90 bp | ACAAAGTCTGCCCTCTTATCCCTCATGCGCAGGCTGCGGGGCAATTaGGTCCAGGACCCTGCAGGAGAGGGGAGGTCAGATCTAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: TKSALLSLMRRLRGN*VQDPAGEGRSDLVM Trigger: CATGACTAGATCTGACCTCCCCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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| CDS TCA 72 bp | CCTCATCTTGATTCTGCCAGGGCCACAAGAGGTATATaGCCAGTCCAGGGACCTTGCCTTCACCCGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PHLDSARATRGI*PVQGPCLHPPV Trigger: CACCGGCGGGTGAAGGCAAGGTCCCTGGACTGGTCATATACCTCTTGTGGCCCTGGCAGAATCAAGATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS TCA 72 bp | CTGTCTGCTCAGACTGTAGGCCTCACTGGGGAGGCATaGCAGGGCCTCATCTTGATTCTGCCAGGGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LSAQTVGLTGEA*QGLILILPGPQ Trigger: TTGTGGCCCTGGCAGAATCAAGATGAGGCCCTGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS GCA 72 bp | ACATGGTGTTCACTGCCAGTGGCAGGCCATGCTGTCTaGTCAGACTGTAGGCCTCACTGGGGAGGCATGACA | + |
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Preference number: 6 (lower is better) Translates to: TWCSLPVAGHAV*SDCRPHWGGMT Trigger: TGTCATGCCTCCCCAGTGAGGCCTACAGTCTGAGCAGACAGCATGGCCTGCCACTGGCAGTGAACACCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS GCA 72 bp | TACACCATACCATCAAGCAAAGGCCCGGCCACCTCCTaGAGACATGGTGTTCACTGCCAGTGGCAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: YTIPSSKGPATS*RHGVHCQWQAM Trigger: CATGGCCTGCCACTGGCAGTGAACACCATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGATGGTATGGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459846.6 |
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| CDS CCA 72 bp | CTCCAGGTCAAACATCTCCACAGTGTTGACAAAGTGTaGGCGAGAGTAGAAGTTGTGGGGCCCAGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LQVKHLHSVDKV*ARVEVVGPRLL Trigger: CAGCAGCCTGGGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000332780.4 ENST00000459846.6 ENST00000471811.1 ENST00000476495.2 |
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| CDS CCA 72 bp | CCAGAGCATACACCATACCATCTGAAGTGCCTTCCTTaGGAGGCCACTCACCTCTCTCCACAGTTGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: PEHTPYHLKCLP*EATHLSPQLQP Trigger: GGGTTGCAACTGTGGAGAGAGGTGAGTGGCCTCCCAAGGAAGGCACTTCAGATGGTATGGTGTATGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476495.2 |
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| CDS TCA 72 bp | AGGACCCATGCTCCAGGTCAAACATCTCCACAGTGTTaGCAAAGTGTGGGCGAGAGTAGAAGTTGTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTHAPGQTSPQC*QSVGESRSCGA Trigger: GGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332780.4 ENST00000459846.6 |
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| CDS TCA 72 bp | GCTCACCATGCTCCAGGTCAAACATCTCCACAGTGTTaGCAAAGTGTGGGCGAGAGTAGAAGTTGTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AHHAPGQTSPQC*QSVGESRSCGA Trigger: GGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471811.1 |
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