RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHDC8A (Homo sapiens)

Ensembl gene IDs: ENSG00000162873

Ensembl transcript IDs: ENST00000367155.8, ENST00000367156.7, ENST00000460687.5, ENST00000491471.5, ENST00000539253.5, ENST00000606111.1, ENST00000606181.1, ENST00000606529.5, ENST00000606887.5, ENST00000607173.5, ENST00000607193.1, ENST00000607826.1

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCCTTCCAAGGCAGCTGCCTCTAGCTTCATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGTAGGCCCACAGTTGACCACCAAATG +
Preference number: 1 (lower is better)
Translates to: FPSKAAASSFMSNSR*VDEVQGRPTVDHQM
Trigger: CATTTGGTGGTCAACTGTGGGCCTACCCTGGACCTCATCTACTCAGCGAGAATTGGACATGAAGCTAGAGGCAGCTGCCTTGGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR CCA 90 bp GCCTGTGCAGTAAGTGAAGACTCTCTTCAGAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGG +
Preference number: 1 (lower is better)
Translates to: ACAVSEDSLQSQLCS*WSHLCLLQFSEIGR
Trigger: CCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAGAGAGTCTTCACTTACTGCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR CCA 90 bp TGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGATTTaGAGCTATAGAGAGGTCAACTTAGAGCCCCAAGGCCAGACTCCA +
Preference number: 1 (lower is better)
Translates to: WSHLCLLQFSEIGRI*SYREVNLEPQGQTP
Trigger: TGGAGTCTGGCCTTGGGGCTCTAAGTTGACCTCTCTATAGCTCCAAATCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR GCA 90 bp CACTGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCTCATGTTAAGAGTGAAGTGATATGG +
Preference number: 1 (lower is better)
Translates to: HWLLTGADILGSSPD*LDKIIPHVKSEVIW
Trigger: CCATATCACTTCACTCTTAACATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR GCA 90 bp TTCTTTGCCTGTGCAGTAAGTGAAGACTCTCTTCAGAGTCAGCTCTaGAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATT +
Preference number: 1 (lower is better)
Translates to: FFACAVSEDSLQSQL*SWWSHLCLLQFSEI
Trigger: AATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAGAGAGTCTTCACTTACTGCACAGGCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR CCA 90 bp CTGAGACTAGACATAAGAAGGACTGAGCTGCTGATGAGTTATGAATaGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGT +
Preference number: 1 (lower is better)
Translates to: LRLDIRRTELLMSYE*KTNTQSQGRRRRTC
Trigger: ACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: GERQQQQSILSVRTALPASQLCS*WSHLCL
Trigger: GAGGCACAGATGACTCCACCAGCTGCAGAGCTGACT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGAAGGCCAGACTCCACTaGTTGCTAACAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWKARLH*LLTGAD
Trigger: GTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGCCTT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGGGGGGTGGCAAAAGGTaGAGTGGAATTAGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWGGGKR*SGIRRD
Trigger: ATCTCTCCTAATTCCACTTCACCTTTTGCCACCCCC...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCTTCAGAGTCAGCTCTaGAGCTGGTGGAGTCATCTG +
Preference number: 2 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSLQSQL*SWWSHL
Trigger: CAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTGAGAAGAAAGTGGTTTaGAACCCCCAATCATTCTCC +
Preference number: 2 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPEKKVV*NPQSFS
Trigger: GGAGAATGATTGGGGGTTCCAAACCACTTTCTTCTC...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCT +
Preference number: 2 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSGSSPD*LDKIIP
Trigger: AGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGGGCTAGGCCTCTGGTaGGGAGGGGGTGGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTGLGLW*GGGGKR
Trigger: CCTTTTGCCACCCCCTCCCCACCAGAGGCCTAGCCC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCTGGTGGAGTCATCTGTaGCTCTTACAGTTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: GERQQQQSILSVRTALPAWWSHL*LLQFSE
Trigger: CTCAGAAAACTGTAAGAGGCACAGATGACTCCACCA...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCAGAACTGCTCTACCTaGCTCCTGGAGATGGGGGTG +
Preference number: 2 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFQNCST*LLEMGV
Trigger: CACCCCCATCTCCAGGAGGCAGGTAGAGCAGTTCTG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTG +
Preference number: 2 (lower is better)
Translates to: GERQQQQSILSVRTALPAKSEVI*SRAKVL
Trigger: CAGTACCTTTGCCCTGGACCATATCACTTCACTCTT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAAAGGCCAGACTCCACTaGTTGCTAACAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: SAAGGVICASYSFLRLVGKARLH*LLTGAD
Trigger: GTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGCCTT...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRSQLCS*WSHLCL
Trigger: GAGGCACAGATGACTCCACCAGCTGCAGAGCTGACT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCT +
Preference number: 2 (lower is better)
Translates to: SAAGGVICASYSFLRLVGGSSPD*LDKIIP
Trigger: AGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAAGGCCAGACTCCACTaGTTGCTAACAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRKARLH*LLTGAD
Trigger: GTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGCCTT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGGAGAAGAAAGTGGTTTaGAACCCCCAATCATTCTCC +
Preference number: 2 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPREKKVV*NPQSFS
Trigger: GGAGAATGATTGGGGGTTCCAAACCACTTTCTTCTC...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGGGCCCTATTTAGCCTaGGAATGCAGGAGGGATTGT +
Preference number: 2 (lower is better)
Translates to: NELWLNELRLDIRRTELLGPYLA*ECRRDC
Trigger: ACAATCCCTCCTGCATTCTCAGGCTAAATAGGGCCC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCT +
Preference number: 2 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFGSSPD*LDKIIP
Trigger: AGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCC...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCGTAGCCCCGACTGCTTaGACAAGATCATTCCTCATG +
Preference number: 2 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFVAPTA*TRSFLM
Trigger: CATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTAC...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR CAA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTaGGACAAGATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCC +
Preference number: 2 (lower is better)
Translates to: WLLTGADILGSSPDC*DKIIPHVKSEVIWS
Trigger: GGACCATATCACTTCACTCTTAACATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: SAAGGVICASYSFLRLVGMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 2 (lower is better)
Translates to: NELWLNELRLDIRRTELLHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGCCTGTGCAGTAAGTaGAGACTCTCTTCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTCLCSK*RLSSES
Trigger: TGACTCTGAAGAGAGTCTTCACTTACTGCACAGGCA...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACCTCTCGGTCAGAACTaGTCTACCTGCCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAPLGQN*STCLLE
Trigger: CTCCAGGAGGCAGGTAGAGCAGTTCTGACCGAGAGG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGAATTAGGAGAGATGTaGGGAGCAGACCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAELGEM*GADPGL
Trigger: CAGCCCTGGGTCTGCTCCCCACATCTCTCCTAATTC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAMSNSR*VDEVQG
Trigger: ACCCTGGACCTCATCTACTCAGCGAGAATTGGACAT...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAAGGGGGTGGCAAAAGGTaGAGTGGAATTAGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKGGGKR*SGIRRD
Trigger: ATCTCTCCTAATTCCACTTCACCTTTTGCCACCCCC...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 2 (lower is better)
Translates to: GAREDRNIDFNHCAAAINHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 2 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR TCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: GAREDRNIDFNHCAAAINMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR GCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCATGGTGGAGTCATCTGTaGCTCTTACAGTTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAWWSHL*LLQFSE
Trigger: CTCAGAAAACTGTAAGAGGCACAGATGACTCCACCA...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACTTAATCCATCTTTTGTaGATTTTGATGCCACAGTGT +
Preference number: 2 (lower is better)
Translates to: GAREDRNIDFNHCAAAINLIHLL*ILMPQC
Trigger: ACACTGTGGCATCAAAATCCACAAAAGATGGATTAA...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR GCA 72 bp CCCAGGGCTGGGAGACTGCTCCTTCCCCATCACACATaGCCATCAAGGACCCCAAGAGGAAGGGATTCTTCC +
Preference number: 3 (lower is better)
Translates to: PRAGRLLLPHHT*PSRTPRGRDSS
Trigger: GGAAGAATCCCTTCCTCTTGGGGTCCTTGATGGGCATGTGTGATGGGGAAGGAGCAGTCTCCCAGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR TCA 72 bp AAGGCAGCTGCCTCTAGCTTCATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGTAGGCCCACAGTTGAC +
Preference number: 3 (lower is better)
Translates to: KAAASSFMSNSR*VDEVQGRPTVD
Trigger: GTCAACTGTGGGCCTACCCTGGACCTCATCTACTCAGCGAGAATTGGACATGAAGCTAGAGGCAGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCAGTAGCCCCGACTGCTaGGACAAGATCATTCCTCAT +
Preference number: 3 (lower is better)
Translates to: GERQQQQSILSVRTALPASSPDC*DKIIPH
Trigger: ATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGCCAGACTCCACTGGTaGCTAACAGGAGCTGACATT +
Preference number: 3 (lower is better)
Translates to: SAAGGVICASYSFLRLVGARLHW*LTGADI
Trigger: AATGTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCGCCAGACTCCACTGGTaGCTAACAGGAGCTGACATT +
Preference number: 3 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFARLHW*LTGADI
Trigger: AATGTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGC...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGTACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 3 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAATGCAGGAGGGATaGTTTTATGGGGTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRRMQEG*FYGVLP
Trigger: AGGGAGGACCCCATAAAACAATCCCTCCTGCATTCT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR GCA 72 bp CTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCTCATGTTAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: LTGADILGSSPD*LDKIIPHVKSE
Trigger: TTCACTCTTAACATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR CCA 72 bp GACATAAGAAGGACTGAGCTGCTGATGAGTTATGAATaGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: DIRRTELLMSYE*KTNTQSQGRRR
Trigger: TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAGCTCAGTCCTTCTTATGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAACAGGAGCTGACATTCTaGGAAGTAGCCCCGACTGCT +
Preference number: 3 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKQELTF*EVAPTA
Trigger: AGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTG...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGCCAGACTCCACTGGTaGCTAACAGGAGCTGACATT +
Preference number: 3 (lower is better)
Translates to: GAREDRNIDFNHCAAAINARLHW*LTGADI
Trigger: AATGTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGTACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 3 (lower is better)
Translates to: NELWLNELRLDIRRTELLYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
3UTR-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACTACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 3 (lower is better)
Translates to: GAREDRNIDFNHCAAAINYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTAGTAGACCCGGCGGCTaGGCAGTGGCGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPSRPGG*AVAPGA
Trigger: AGCGCCTGGCGCCACTGCCCAGCCGCCGGGTCTACT...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTCGTCACATCCCCCGATaGCATAGACCTGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPRHIPR*HRPGPR
Trigger: CCGGGGGCCAGGTCTATGCCATCGGGGGATGTGACG...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCCAGACCCCGGCCAGTaGTTCACCGTGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWPDPGQ*FTVPRV
Trigger: GACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCAGACGACGCATCACTaGGGAGCCCGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSQTTHH*GARSPR
Trigger: GCGGGGGCTCCGGGCTCCCCAGTGATGCGTCGTCTG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACGGTCCACCGGCTACTTaGCGCCGGCTCCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNGPPAT*RRLPRP
Trigger: GGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACC...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTTCGTCCGCAGGAACTTaGGCTGCCGGTAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPSSAGT*AAGRGD
Trigger: GTCGCCTCTACCGGCAGCCCAAGTTCCTGCGGACGA...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGACCTTCAGGGGCAGCTaGTTGGTGCCCACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWTFRGS*LVPTPP
Trigger: TGGGGGCGTGGGCACCAATCAGCTGCCCCTGAAGGT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCACCTTCAGGGGCAGCTaGTTGGTGCCCACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPATFRGS*LVPTPP
Trigger: TGGGGGCGTGGGCACCAATCAGCTGCCCCTGAAGGT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGCAGCCAGGCCCCTATaGACAGGGCATGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSAARPL*TGHGAS
Trigger: GCTGGCCCCATGCCCTGTGCATAGGGGCCTGGCTGC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCCAGACCCCGGCCAGTaGTTCACCGTGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKPDPGQ*FTVPRV
Trigger: GACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGGCCCGGAGTGCCCTCTaGAGGGTACCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRARSAL*RVPRWL
Trigger: CAGCCAGCGTGGTACCCTGCAGAGGGCACTCCGGGC...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACATCGCCACCTCCATCTaGCTCCCGAGCGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNIATSI*LPSAGP
Trigger: GGGTCCGGCGCTCGGGAGCCAGATGGAGGTGGCGAT...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGGTCCACCGGCTACTTaGCGCCGGCTCCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGGPPAT*RRLPRP
Trigger: GGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCGTCACATCCCCCGATaGCATAGACCTGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSRHIPR*HRPGPR
Trigger: CCGGGGGCCAGGTCTATGCCATCGGGGGATGTGACG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTCAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPQHISG*AWVLGT
Trigger: TGTCCCTAGCACCCATGCCCACCCCGAGATATGCTG...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCGCGTCACTCAGACCCTaGTTGACACCTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAASLRP*LTPPTA
Trigger: CGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGC...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGACCTTCAGGGGCAGCTaGTTGGTGCCCACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKTFRGS*LVPTPP
Trigger: TGGGGGCGTGGGCACCAATCAGCTGCCCCTGAAGGT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRASASP*PESQRS
Trigger: GGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGC...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCCAGCCCCGCCCTGAATaGACAGAAACTTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAQPRPE*TETWGP
Trigger: GGGACCCCAAGTTTCTGTGCATTCAGGGCGGGGCTG...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTTGCAGGGTACCACGCTaGCTGGAGGCACACACCAGG +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSCRVPR*LEAHTR
Trigger: CCTGGTGTGTGCCTCCAGCCAGCGTGGTACCCTGCA...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAAGTAGACCCGGCGGCTaGGCAGTGGCGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETSRPGG*AVAPGA
Trigger: AGCGCCTGGCGCCACTGCCCAGCCGCCGGGTCTACT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTTCGTCCGCAGGAACTTaGGCTGCCGGTAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSSSAGT*AAGRGD
Trigger: GTCGCCTCTACCGGCAGCCCAAGTTCCTGCGGACGA...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPSQLCS*WSHLCL
Trigger: GAGGCACAGATGACTCCACCAGCTGCAGAGCTGACT...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAGGCGGCGTCCACGCCTaGCCCGGAGTGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRGGVHA*PGVPSA
Trigger: TGCAGAGGGCACTCCGGGCCAGGCGTGGACGCCGCC...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR TCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACGCCCCCAATCACCATaGTCCGCTTCCCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGRPQSP*SASPGR
Trigger: CCGCCCTGGGGAAGCGGATCATGGTGATTGGGGGCG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCACTCAGACCCTGGTTaGCACCTCCCACGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRHSDPG*HLPRRG
Trigger: TCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGAAACTTGGGGTCCCTaGGTTCCAGGAGGCGTGACC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSETWGP*VPGGVT
Trigger: GGTCACGCCTCCTGGAACTCAGGGACCCCAAGTTTC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR TCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGGCTGCTGCCTCTGGCTaGTCGACTGGGATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRAAASG*STGMQP
Trigger: TGGCTGCATCCCAGTCGATCAGCCAGAGGCAGCAGC...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR GCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACCAGCCACCACACCTGTaGAGGAATCCGCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNQPPHL*RNPRAS
Trigger: GGACGCACGCGGATTCCTGCACAGGTGTGGTGGCTG...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCACACAGGGCCTCCACTaGGTCACTCAGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPATQGLH*VTQTLV
Trigger: AACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTCTTCAGAGTCAGCTCTaGAGCTGGTGGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPLQSQL*SWWSHL
Trigger: CAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAG...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCCCTCTCGGTCAGAACTaGTCTACCTGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAPLGQN*STCLLE
Trigger: CTCCAGGAGGCAGGTAGAGCAGTTCTGACCGAGAGG...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGGGTACCACGCTGGCTaGAGGCACACACCAGGAACT +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSGYHAG*RHTPGT
Trigger: AGTTCCTGGTGTGTGCCTCCAGCCAGCGTGGTACCC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGGTCCACCGGCTACTTaGCGCCGGCTCCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSGPPAT*RRLPRP
Trigger: GGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCCTCGAAGCAGTCCATaGGGACGCCGTTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSPRSSP*GRRCRH
Trigger: GTGACGACAACGGCGTCCCCATGGACTGCTTCGAGG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCCAGCACGTAGATCTTaGAGCCTCGGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWPARRS*SLGGRR
Trigger: CCTCCTTCCTCCGAGGCTCCAAGATCTACGTGCTGG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCCCAGCACGTAGATCTTaGAGCCTCGGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAPARRS*SLGGRR
Trigger: CCTCCTTCCTCCGAGGCTCCAAGATCTACGTGCTGG...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCCTGTTTTCCTGGGAGTaGGGCAACTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPALFSWE*GNWWWL
Trigger: CAGCCACCACCAGTTGCCCCACTCCCAGGAAAACAG...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCACGCCCCCAATCACCATaGTCCGCTTCCCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPRPQSP*SASPGR
Trigger: CCGCCCTGGGGAAGCGGATCATGGTGATTGGGGGCG...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGTCCACGCCTGGCCCTaGCTGGAGGGAAAAGGATCG +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEVHAWP*LEGKGS
Trigger: CGATCCTTTTCCCTCCAGTCAGGGCCAGGCGTGGAC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR GCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGGGGCAGCTGATTGGTaGCCACGCCCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEGAADW*PRPQSP
Trigger: TGGTGATTGGGGGCGTGGGCACCAATCAGCTGCCCC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCAGGCCCATCCCGCCTaGCGCATATACTCGGTAATC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSQAHPA*RIYSVI
Trigger: GATTACCGAGTATATGCGGCAGGCGGGATGGGCCTG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKLPWVE*FRRLQD
Trigger: GTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRLPWVE*FRRLQD
Trigger: GTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCAGAACTGCTCTACCTaGCTCCTGGAGATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSQNCST*LLEMGV
Trigger: CACCCCCATCTCCAGGAGGCAGGTAGAGCAGTTCTG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTGTGTCCTCATCTGACTaGAGGGAAAAGGATCGACAC +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPVSSSD*REKDRH
Trigger: GTGTCGATCCTTTTCCCTCCAGTCAGATGAGGACAC...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGACCCCACAGACCATGTaGTCAGCATCAGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWTPQTM*SASDRL
Trigger: CAGCCTGTCTGATGCTGACCACATGGTCTGTGGGGT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGTCAGGGGCAGCTGATTaGTGCCCACGCCCCCAATCA +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKSGAAD*CPRPQS
Trigger: TGATTGGGGGCGTGGGCACCAATCAGCTGCCCCTGA...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTCAGGGGCAGCTGATTaGTGCCCACGCCCCCAATCA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNSGAAD*CPRPQS
Trigger: TGATTGGGGGCGTGGGCACCAATCAGCTGCCCCTGA...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGATCTCGGGGTGGGCATaGGTGCTAGGGACACCCACA +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKISGWA*VLGTPT
Trigger: TGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGAT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCTCGGAGGAAGGAGGTaGCAGCATATCTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKLGGRR*QHISGW
Trigger: CCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCTCGGAGGAAGGAGGTaGCAGCATATCTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRLGGRR*QHISGW
Trigger: CCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWPGSQS*RRPAYR
Trigger: CCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGAGGCACAGCGGGGTGTaGGCATGGCAGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPERHSGV*AWQGGS
Trigger: AGATCCTCCCTGCCATGCCCACACCCCGCTGTGCCT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCGAATTAGGAGAGATGTaGGGAGCAGACCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAELGEM*GADPGL
Trigger: CAGCCCTGGGTCTGCTCCCCACATCTCTCCTAATTC...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACCTCTGGCTGATCGACTaGGATGCAGCCAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNLWLID*DAARPL
Trigger: TAGGGGCCTGGCTGCATCCCAGTCGATCAGCCAGAG...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR TCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGTCCCCCAGCCACTATaGCCCGTCCACTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETVPQPL*PVHSES
Trigger: GCTCTCTGAGTGGACGGGTCATAGTGGCTGGGGGAC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCGAGGAGGCAGTTCTTaGCGACTATGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRRGGSS*RLCWSR
Trigger: CCTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGGGGCCCTATTTAGCCTaGGAATGCAGGAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWGPYLA*ECRRDC
Trigger: ACAATCCCTCCTGCATTCTCAGGCTAAATAGGGCCC...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGACCCCGGCCAGTaGTTCACCGTGCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSPDPGQ*FTVPRV
Trigger: GACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCGGCCTCACGCAGCATaGTCCTCTTCTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKRPHAA*SSSSTC
Trigger: GCAAGTGGAAGAAGAGGAGCATGCTGCGTGAGGCCG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGCCAGCCACAAAATCTaGCCGCCGCTTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSASHKI*PPLLEE
Trigger: TTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGACACAGGGCCTCCACTaGGTCACTCAGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKTQGLH*VTQTLV
Trigger: AACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCACGCCTGGCCCGGAGTaGCCTCTGCAGGGTACCACG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSTPGPE*PLQGTT
Trigger: CGTGGTACCCTGCAGAGGGCACTCCGGGCCAGGCGT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR CCA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPAYREC*ETWSRS
Trigger: GCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGC...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACATCGTCCGCAGGAACTTaGGCTGCCGGTAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETSSAGT*AAGRGD
Trigger: GTCGCCTCTACCGGCAGCCCAAGTTCCTGCGGACGA...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCCGTCTCCAGGACAGTaGGTTGATTCCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKPSPGQ*VDSQVP
Trigger: GGGGACTTGGGAATCAACCCACTGTCCTGGAGACGG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCCATTTGTTCTTCCCTaGGTGGAATGCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWPFVLP*VECFRR
Trigger: ACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGCGTCACTCAGACCCTaGTTGACACCTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETASLRP*LTPPTA
Trigger: CGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGGGCTAGGCCTCTGGTaGGGAGGGGGTGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPGLGLW*GGGGKR
Trigger: CCTTTTGCCACCCCCTCCCCACCAGAGGCCTAGCCC...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACCTATGCACAGGGCATaGGGCCAGCCCCGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRPMHRA*GQPRPE
Trigger: TTCAGGGCGGGGCTGGCCCCATGCCCTGTGCATAGG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR CCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCACTGCTGCTGCCTCTaGCTGATCGACTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRHCCCL*LIDWDA
Trigger: TGCATCCCAGTCGATCAGCCAGAGGCAGCAGCAGTG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR TCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACGGTAATCTTTGGCCGTaGCAGAAATGCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNGNLWP*QKCPWR
Trigger: CCGCCATGGGCATTTCTGTCACGGCCAAAGATTACC...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCTGCCCGCCGCTTCTTaGGGAAGAACGATCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPELPAAS*GRTIVP
Trigger: TGGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGTCCCCCAGCCACTATaGCCCGTCCACTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPVPQPL*PVHSES
Trigger: GCTCTCTGAGTGGACGGGTCATAGTGGCTGGGGGAC...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGATGTCGGAGTGCCCTCTaGAGGGTACCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRCRSAL*RVPRWL
Trigger: CAGCCAGCGTGGTACCCTGCAGAGGGCACTCCGACA...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGTCCCGGGACACAGCGTaGTGTGACCTCTGTACAGAA +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRSRDTA*CDLCTE
Trigger: TTCTGTACAGAGGTCACAGCACGCTGTGTCCCGGGA...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCGGCCTCACGCAGCATaGTCCTCTTCTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPERPHAA*SSSSTC
Trigger: GCAAGTGGAAGAAGAGGAGCATGCTGCGTGAGGCCG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACGCCAGCCACAAAATCTaGCCGCCGCTTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNASHKI*PPLLEE
Trigger: TTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGC...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGCTGATCGACTGGGATaGAGCCAGGCCCCTATGCAC +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETADRLG*SQAPMH
Trigger: GTGCATAGGGGCCTGGCTGCATCCCAGTCGATCAGC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR GCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGAAAGGGGCTGTCCTTTaGAACGCTGCCAGTTATGCA +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWKGAVL*NAASYA
Trigger: TGCATAACTGGCAGCGTTGCAAAGGACAGCCCCTTT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGGGTACCACGCTGGCTaGAGGCACACACCAGGAACT +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETGYHAG*RHTPGT
Trigger: AGTTCCTGGTGTGTGCCTCCAGCCAGCGTGGTACCC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGCCAGGCGCTTCCACTaGAAGTCCTTGACGTTAGGC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEARRFH*KSLTLG
Trigger: GCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACCTCGAAGCAGTCCATaGGGACGCCGTTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGPRSSP*GRRCRH
Trigger: GTGACGACAACGGCGTCCCCATGGACTGCTTCGAGG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAATCTCGGGGTGGGCATaGGTGCTAGGGACACCCACA +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETISGWA*VLGTPT
Trigger: TGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGAT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACTCGGAGGAAGGAGGTaGCAGCATATCTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETLGGRR*QHISGW
Trigger: CCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCCGTCTCCAGGACAGTaGGTTGATTCCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEPSPGQ*VDSQVP
Trigger: GGGGACTTGGGAATCAACCCACTGTCCTGGAGACGG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGGCACAGCGGGGTGTaGGCATGGCAGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRRHSGV*AWQGGS
Trigger: AGATCCTCCCTGCCATGCCCACACCCCGCTGTGCCT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCGTAGCCCCGACTGCTTaGACAAGATCATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAVAPTA*TRSFLM
Trigger: CATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTAC...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKSQLCS*WSHLCL
Trigger: GAGGCACAGATGACTCCACCAGCTGCAGAGCTGACT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACGAGGAGGCAGTTCTTaGCGACTATGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETRGGSS*RLCWSR
Trigger: CCTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACGAGGAGGCAGTTCTTaGCGACTATGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGRGGSS*RLCWSR
Trigger: CCTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCACTCAGACCCTGGTTaGCACCTCCCACGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLHSDPG*HLPRRG
Trigger: TCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCACTCAGACCCTGGTTaGCACCTCCCACGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSHSDPG*HLPRRG
Trigger: TCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCTCACCTTGTCGGAGTaGCCTCTGCAGGGTACCACG +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFLTLSE*PLQGTT
Trigger: CGTGGTACCCTGCAGAGGGCACTCCGACAAGGTGAG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGTGCAGGAATCCGCGTaGGTCCCGGGACACAGCGTG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTVQESA*VPGHSV
Trigger: CACGCTGTGTCCCGGGACGCACGCGGATTCCTGCAC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGGGGCAGCTGATTGGTaGCCACGCCCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSGAADW*PRPQSP
Trigger: TGGTGATTGGGGGCGTGGGCACCAATCAGCTGCCCC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACGGCCTCACGCAGCATaGTCCTCTTCTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGRPHAA*SSSSTC
Trigger: GCAAGTGGAAGAAGAGGAGCATGCTGCGTGAGGCCG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACAGGCCCATCCCGCCTaGCGCATATACTCGGTAATC +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETQAHPA*RIYSVI
Trigger: GATTACCGAGTATATGCGGCAGGCGGGATGGGCCTG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFLPWVE*FRRLQD
Trigger: GTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCTTCAGAGTCAGCTCTaGAGCTGGTGGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKLQSQL*SWWSHL
Trigger: CAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACAGAACTGCTCTACCTaGCTCCTGGAGATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETQNCST*LLEMGV
Trigger: CACCCCCATCTCCAGGAGGCAGGTAGAGCAGTTCTG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACCTCTCGGTCAGAACTaGTCTACCTGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGPLGQN*STCLLE
Trigger: CTCCAGGAGGCAGGTAGAGCAGTTCTGACCGAGAGG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGGAGCCGGACTCCTCTaGCAGATGGGAGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGGAGLL*QMGENG
Trigger: TCCATTCTCTCCCATCTGGCAGAGGAGTCCGGCTCC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAGGGTACCACGCTGGCTaGAGGCACACACCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRGYHAG*RHTPGT
Trigger: AGTTCCTGGTGTGTGCCTCCAGCCAGCGTGGTACCC...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCTGCAGGGTACCACGCTaGCTGGAGGCACACACCAGG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSCRVPR*LEAHTR
Trigger: CCTGGTGTGTGCCTCCAGCCAGCGTGGTACCCTGCA...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETQHISG*AWVLGT
Trigger: TGTCCCTAGCACCCATGCCCACCCCGAGATATGCTG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEPGSQS*RRPAYR
Trigger: CCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCAGGCACAGCGGGGTGTaGGCATGGCAGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSRHSGV*AWQGGS
Trigger: AGATCCTCCCTGCCATGCCCACACCCCGCTGTGCCT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGTAGCCCCGACTGCTTaGACAAGATCATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSVAPTA*TRSFLM
Trigger: CATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTAC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGAAGGCCAGACTCCACTaGTTGCTAACAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKKARLH*LLTGAD
Trigger: GTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGCCTT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACTTCCTGCCATGGCCTaGGCTGTCCAAGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRLPAMA*AVQVSL
Trigger: CAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTCACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGGACTCCTCTGCCAGATaGGAGAGAATGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRDSSAR*ERMEGR
Trigger: TCTTCCCTCCATTCTCTCCCATCTGGCAGAGGAGTC...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGTCCCCCAGCCACTATaGCCCGTCCACTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTVPQPL*PVHSES
Trigger: GCTCTCTGAGTGGACGGGTCATAGTGGCTGGGGGAC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACACTCAGACCCTGGTTaGCACCTCCCACGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTHSDPG*HLPRRG
Trigger: TCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCACCAGGGCAAAGGTACTaGGCCCAGAGACAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPPGQRY*AQRQLG
Trigger: TCCTAGCTGTCTCTGGGCTCAGTACCTTTGCCCTGG...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGGAGGCCGGCGAGCCTaGTCCGCTCCGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAGGRRA*SAPSPS
Trigger: GGATGGGGACGGAGCGGAGCAGGCTCGCCGGCCTCC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGCCAGCCACAAAATCTaGCCGCCGCTTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETASHKI*PPLLEE
Trigger: TTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLPWVE*FRRLQD
Trigger: GTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAACACAGGGCCTCCACTaGGTCACTCAGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPTQGLH*VTQTLV
Trigger: AACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGT...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCT +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKGSSPD*LDKIIP
Trigger: AGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCC...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGTGGTGGAGTCATCTGTaGCTCTTACAGTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWWWSHL*LLQFSE
Trigger: CTCAGAAAACTGTAAGAGGCACAGATGACTCCACCA...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCACAGAACTGCTCTACCTaGCTCCTGGAGATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPQNCST*LLEMGV
Trigger: CACCCCCATCTCCAGGAGGCAGGTAGAGCAGTTCTG...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACCTCTCGGTCAGAACTaGTCTACCTGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRPLGQN*STCLLE
Trigger: CTCCAGGAGGCAGGTAGAGCAGTTCTGACCGAGAGG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACCACCCGGCGATCATCTaGAAAAGACAAAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNHPAII*KRQRRG
Trigger: TCCCCTTCTTTGTCTTTTGCAGATGATCGCCGGGTG...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCAATCGGAGTGCCCTCTaGAGGGTACCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSNRSAL*RVPRWL
Trigger: CAGCCAGCGTGGTACCCTGCAGAGGGCACTCCGATT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460687.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGCTGCATCTGAATCCTaGTGCAGCCACCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETAASES*CSHLLA
Trigger: AGCTAGGAGGTGGCTGCACCAGGATTCAGATGCAGC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAACCCCACAGACCATGTaGTCAGCATCAGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETTPQTM*SASDRL
Trigger: CAGCCTGTCTGATGCTGACCACATGGTCTGTGGGGT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGATCTCGGGGTGGGCATaGGTGCTAGGGACACCCACA +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLISGWA*VLGTPT
Trigger: TGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGAT...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCATCTCGGGGTGGGCATaGGTGCTAGGGACACCCACA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSISGWA*VLGTPT
Trigger: TGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGAT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRQHISG*AWVLGT
Trigger: TGTCCCTAGCACCCATGCCCACCCCGAGATATGCTG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCCAGCACGTAGATCTTaGAGCCTCGGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFPARRS*SLGGRR
Trigger: CCTCCTTCCTCCGAGGCTCCAAGATCTACGTGCTGG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGPGSQS*RRPAYR
Trigger: CCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGCGTCACTCAGACCCTaGTTGACACCTCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTASLRP*LTPPTA
Trigger: CGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGAAACTAGTTCAGAGCTaGGGAAAGACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWKLVQS*GKTATA
Trigger: TGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAGTTT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCAAGGGAGAAGAAAGTaGTTTGGAACCCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWQGRRK*FGTPNH
Trigger: ATGATTGGGGGTTCCAAACCACTTTCTTCTCCCTTG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTTCCTGCCATGGCCTaGGCTGTCCAAGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLPAMA*AVQVSL
Trigger: CAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCTGTTTTCCTGGGAGTaGGGCAACTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFLFSWE*GNWWWL
Trigger: CAGCCACCACCAGTTGCCCCACTCCCAGGAAAACAG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGATGAGGAGATGAAGTaGACAGCAGGAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEDEEMK*TAGRRS
Trigger: GCTTCTCCTTCCTGCTGTTCACTTCATCTCCTCATC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR TCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAGGTAATCTTTGGCCGTaGCAGAAATGCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRGNLWP*QKCPWR
Trigger: CCGCCATGGGCATTTCTGTCACGGCCAAAGATTACC...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAAGACCTCGAAAGCGTTaGCCGCGTACTTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPRPRKR*PRTWTV
Trigger: GACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCT...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCGAGGAGGCAGTTCTTaGCGACTATGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLRGGSS*RLCWSR
Trigger: CCTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCCTGTGCAGTAAGTaGAGACTCTCTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNCLCSK*RLSSES
Trigger: TGACTCTGAAGAGAGTCTTCACTTACTGCACAGGCA...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEMSNSR*VDEVQG
Trigger: ACCCTGGACCTCATCTACTCAGCGAGAATTGGACAT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGGGGGTGGCAAAAGGTaGAGTGGAATTAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEGGGKR*SGIRRD
Trigger: ATCTCTCCTAATTCCACTTCACCTTTTGCCACCCCC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCATGCCACAGTGTAAATaGGAGGGTTTCACACAGAAA +
Preference number: 4 (lower is better)
Translates to: GERQQQQSILSVRTALPAMPQCK*EGFTQK
Trigger: TTTCTGTGTGAAACCCTCTCATTTACACTGTGGCAT...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGATGCCACAGTGTAAATaGGAGGGTTTCACACAGAAA +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWMPQCK*EGFTQK
Trigger: TTTCTGTGTGAAACCCTCTCATTTACACTGTGGCAT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGGGCCCTATTTAGCCTaGGAATGCAGGAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETGPYLA*ECRRDC
Trigger: ACAATCCCTCCTGCATTCTCAGGCTAAATAGGGCCC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGGGCCCTATTTAGCCTaGGAATGCAGGAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGGPYLA*ECRRDC
Trigger: ACAATCCCTCCTGCATTCTCAGGCTAAATAGGGCCC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCAGGCCCATCCCGCCTaGCGCATATACTCGGTAATC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSQAHPA*RIYSVI
Trigger: GATTACCGAGTATATGCGGCAGGCGGGATGGGCCTG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCACACAGGGCCTCCACTaGGTCACTCAGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSTQGLH*VTQTLV
Trigger: AACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACTTCAGAGTCAGCTCTaGAGCTGGTGGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETLQSQL*SWWSHL
Trigger: CAGATGACTCCACCAGCTGCAGAGCTGACTCTGAAG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACGAGAAGAAGAACATGTaGTGTTTTCCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNEKKNM*CFPGSG
Trigger: CCCACTCCCAGGAAAACAGCACATGTTCTTCTTCTC...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAACCCCACAGACCATGTaGTCAGCATCAGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRTPQTM*SASDRL
Trigger: CAGCCTGTCTGATGCTGACCACATGGTCTGTGGGGT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGCCAGGCGCTTCCACTaGAAGTCCTTGACGTTAGGC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSARRFH*KSLTLG
Trigger: GCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACAGTAGACCCGGCGGCTaGGCAGTGGCGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINSRPGG*AVAPGA
Trigger: AGCGCCTGGCGCCACTGCCCAGCCGCCGGGTCTACT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACCTCGAAGCAGTCCATaGGGACGCCGTTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTPRSSP*GRRCRH
Trigger: GTGACGACAACGGCGTCCCCATGGACTGCTTCGAGG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLQHISG*AWVLGT
Trigger: TGTCCCTAGCACCCATGCCCACCCCGAGATATGCTG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACTCGGAGGAAGGAGGTaGCAGCATATCTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTLGGRR*QHISGW
Trigger: CCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGCACGTAGATCTTaGAGCCTCGGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSPARRS*SLGGRR
Trigger: CCTCCTTCCTCCGAGGCTCCAAGATCTACGTGCTGG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNAYREC*ETWSRS
Trigger: GCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGC...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCCTAGGCTGTACAAGTaGTTGTCCAGGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEPRLYK*LSRVTK
Trigger: CTTTGTGACCCTGGACAACCACTTGTACAGCCTAGG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCGTCTCCAGGACAGTaGGTTGATTCCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSPSPGQ*VDSQVP
Trigger: GGGGACTTGGGAATCAACCCACTGTCCTGGAGACGG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCCGTCTCCAGGACAGTaGGTTGATTCCCAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLPSPGQ*VDSQVP
Trigger: GGGGACTTGGGAATCAACCCACTGTCCTGGAGACGG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAAGTCAGCTCTGCAGCTaGTGGAGTCATCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPSQLCS*WSHLCL
Trigger: GAGGCACAGATGACTCCACCAGCTGCAGAGCTGACT...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGAGAAGAAAGTGGTTTaGAACCCCCAATCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSEKKVV*NPQSFS
Trigger: GGAGAATGATTGGGGGTTCCAAACCACTTTCTTCTC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAGAATTAGGAGAGATGTaGGGAGCAGACCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRELGEM*GADPGL
Trigger: CAGCCCTGGGTCTGCTCCCCACATCTCTCCTAATTC...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTGTTTTCCTGGGAGTaGGGCAACTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLFSWE*GNWWWL
Trigger: CAGCCACCACCAGTTGCCCCACTCCCAGGAAAACAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCACATGTGCTGTTTTCCTaGGAGTGGGGCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPHVLFS*EWGNWW
Trigger: CCACCAGTTGCCCCACTCCCAGGAAAACAGCACATG...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCACTGAGTGTCCTCATCTaGCTGGAGGGAAAAGGATCG +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPLSVLI*LEGKGS
Trigger: CGATCCTTTTCCCTCCAGTCAGATGAGGACACTCAG...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACGCCCCCAATCACCATaGTCCGCTTCCCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSARPQSP*SASPGR
Trigger: CCGCCCTGGGGAAGCGGATCATGGTGATTGGGGGCG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCAGACCTCGAAAGCGTTaGCCGCGTACTTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSRPRKR*PRTWTV
Trigger: GACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACTGCCCGCCGCTTCTTaGGGAAGAACGATCGTTCCA +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTLPAAS*GRTIVP
Trigger: TGGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGATGCAGTTTTCTTTCTaGAGCACCCCACAGACCATG +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEMQFSF*STPQTM
Trigger: CATGGTCTGTGGGGTGCTGCAGAAAGAAAACTGCAT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTCCTCTTCTTCCACTTaGCCTCATCGATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNSSSST*PHRCCT
Trigger: TGTACAACATCGATGAGGGCAAGTGGAAGAAGAGGA...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGTGTCCTCATCTGACTaGAGGGAAAAGGATCGACAC +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGVSSSD*REKDRH
Trigger: GTGTCGATCCTTTTCCCTCCAGTCAGATGAGGACAC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGTGTCCTCATCTGACTaGAGGGAAAAGGATCGACAC +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETVSSSD*REKDRH
Trigger: GTGTCGATCCTTTTCCCTCCAGTCAGATGAGGACAC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAATCGCCACCTCCATCTaGCTCCCGAGCGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAIATSI*LPSAGP
Trigger: GGGTCCGGCGCTCGGGAGCCAGATGGAGGTGGCGAT...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAAATCGCCACCTCCATCTaGCTCCCGAGCGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKIATSI*LPSAGP
Trigger: GGGTCCGGCGCTCGGGAGCCAGATGGAGGTGGCGAT...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAGAATGTTGGGAAACTTaGTCCAGGAGCGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGECWET*SRSESR
Trigger: TCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTC...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEAYREC*ETWSRS
Trigger: GCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCCATTTGTTCTTCCCTaGGTGGAATGCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFPFVLP*VECFRR
Trigger: ACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGAAACTAGTTCAGAGCTaGGGAAAGACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: WLLTGADILGSSPDCLDKKLVQS*GKTATA
Trigger: TGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAGTTT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCAAGGGAGAAGAAAGTaGTTTGGAACCCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRQGRRK*FGTPNH
Trigger: ATGATTGGGGGTTCCAAACCACTTTCTTCTCCCTTG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCATGTGCTGTTTTCCTaGGAGTGGGGCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSHVLFS*EWGNWW
Trigger: CCACCAGTTGCCCCACTCCCAGGAAAACAGCACATG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCTGATGAGTTATGAATaGAAGACTAACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWLMSYE*KTNTQS
Trigger: AGACTGCGTGTTAGTCTTCCATTCATAACTCATCAG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAACGCCTGGCCCTGACTaGAGGGAAAAGGATCGACAC +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTTPGPD*REKDRH
Trigger: GTGTCGATCCTTTTCCCTCCAGTCAGGGCCAGGCGT...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTGAGTGTCCTCATCTaGCTGGAGGGAAAAGGATCG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLSVLI*LEGKGS
Trigger: CGATCCTTTTCCCTCCAGTCAGATGAGGACACTCAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGGTAATCTTTGGCCGTaGCAGAAATGCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTGNLWP*QKCPWR
Trigger: CCGCCATGGGCATTTCTGTCACGGCCAAAGATTACC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGATGCCTGTGCAGTAAGTaGAGACTCTCTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGCLCSK*RLSSES
Trigger: TGACTCTGAAGAGAGTCTTCACTTACTGCACAGGCA...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRMSNSR*VDEVQG
Trigger: ACCCTGGACCTCATCTACTCAGCGAGAATTGGACAT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAATGCAGTTTTCTTTCTaGAGCACCCCACAGACCATG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETMQFSF*STPQTM
Trigger: CATGGTCTGTGGGGTGCTGCAGAAAGAAAACTGCAT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAASASP*PESQRS
Trigger: GGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINASASP*PESQRS
Trigger: GGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACGTCACATCCCCCGATaGCATAGACCTGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSARHIPR*HRPGPR
Trigger: CCGGGGGCCAGGTCTATGCCATCGGGGGATGTGACG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCATTTGTTCTTCCCTaGGTGGAATGCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSPFVLP*VECFRR
Trigger: ACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEKSEVI*SRAKVL
Trigger: CAGTACCTTTGCCCTGGACCATATCACTTCACTCTT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGAGAAGAAAGTGGTTTaGAACCCCCAATCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEEKKVV*NPQSFS
Trigger: GGAGAATGATTGGGGGTTCCAAACCACTTTCTTCTC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGGGCTAGGCCTCTGGTaGGGAGGGGGTGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINGLGLW*GGGGKR
Trigger: CCTTTTGCCACCCCCTCCCCACCAGAGGCCTAGCCC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACACACAGAAACACTCTaGGGGCCTTCGGTGACAAAA +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRHTETL*GPSVTK
Trigger: TTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACTGAGTGTCCTCATCTaGCTGGAGGGAAAAGGATCG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTLSVLI*LEGKGS
Trigger: CGATCCTTTTCCCTCCAGTCAGATGAGGACACTCAG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGACACCTCCTAGCTGTGTaGTTATGCACCAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRHLLAV*LCTSHL
Trigger: TAAGTGACTGGTGCATAATCACACAGCTAGGAGGTG...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCATGTCCAATTCTCGCTaGGTAGATGAGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSMSNSR*VDEVQG
Trigger: ACCCTGGACCTCATCTACTCAGCGAGAATTGGACAT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGGGGGTGGCAAAAGGTaGAGTGGAATTAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSGGGKR*SGIRRD
Trigger: ATCTCTCCTAATTCCACTTCACCTTTTGCCACCCCC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAATGCAGTTTTCTTTCTaGAGCACCCCACAGACCATG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRMQFSF*STPQTM
Trigger: CATGGTCTGTGGGGTGCTGCAGAAAGAAAACTGCAT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGGGGCAGCTGATTGGTaGCCACGCCCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAGAADW*PRPQSP
Trigger: TGGTGATTGGGGGCGTGGGCACCAATCAGCTGCCCC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGGAAGTAGCCCCGACTaGTTGGACAAGATCATTCCT +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLGSSPD*LDKIIP
Trigger: AGGAATGATCTTGTCCAAGCAGTCGGGGCTACTTCC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACATGGTGGAGTCATCTGTaGCTCTTACAGTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETWWSHL*LLQFSE
Trigger: CTCAGAAAACTGTAAGAGGCACAGATGACTCCACCA...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGAATGTTGGGAAACTTaGTCCAGGAGCGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLECWET*SRSESR
Trigger: TCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGAATGTTGGGAAACTTaGTCCAGGAGCGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSECWET*SRSESR
Trigger: TCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGCCTAGGCTGTACAAGTaGTTGTCCAGGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLPRLYK*LSRVTK
Trigger: CTTTGTGACCCTGGACAACCACTTGTACAGCCTAGG...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAATCGTCCGCAGGAACTTaGGCTGCCGGTAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKSSAGT*AAGRGD
Trigger: GTCGCCTCTACCGGCAGCCCAAGTTCCTGCGGACGA...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAAGGCACAGCGGGGTGTaGGCATGGCAGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSARHSGV*AWQGGS
Trigger: AGATCCTCCCTGCCATGCCCACACCCCGCTGTGCCT...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGAAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: SAAGGVICASYSFLRLVGKSEVI*SRAKVL
Trigger: CAGTACCTTTGCCCTGGACCATATCACTTCACTCTT...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAAAGGCCAGACTCCACTaGTTGCTAACAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTKARLH*LLTGAD
Trigger: GTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGCCTT...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACCTGATGAGTTATGAATaGAAGACTAACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNLMSYE*KTNTQS
Trigger: AGACTGCGTGTTAGTCTTCCATTCATAACTCATCAG...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCACCTCCTAGCTGTGTaGTTATGCACCAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSHLLAV*LCTSHL
Trigger: TAAGTGACTGGTGCATAATCACACAGCTAGGAGGTG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR TCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGGACACAGCGTGCTGTaGCCTCTGTACAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAGHSVL*PLYRSP
Trigger: GGGGCTTCTGTACAGAGGTCACAGCACGCTGTGTCC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR GCA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGGATCACCTTCTTTATaGAGTTTTCTTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEGSPSL*SFLSAA
Trigger: TGCTGCAGAAAGAAAACTGCATAAAGAAGGTGATCC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCATCCTCTTCTTCCACTTaGCCTCATCGATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPSSSST*PHRCCT
Trigger: TGTACAACATCGATGAGGGCAAGTGGAAGAAGAGGA...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAATCAGGGGCAGCTGATTaGTGCCCACGCCCCCAATCA +
Preference number: 4 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKSGAAD*CPRPQS
Trigger: TGATTGGGGGCGTGGGCACCAATCAGCTGCCCCTGA...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLAYREC*ETWSRS
Trigger: GCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFKSEVI*SRAKVL
Trigger: CAGTACCTTTGCCCTGGACCATATCACTTCACTCTT...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACTTCCTGCCATGGCCTaGGCTGTCCAAGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSALPAMA*AVQVSL
Trigger: CAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCCAGGGCAAAGGTACTaGGCCCAGAGACAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINPGQRY*AQRQLG
Trigger: TCCTAGCTGTCTCTGGGCTCAGTACCTTTGCCCTGG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCATGTTAAGAGTGAAGTaGTATGGTCCAGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSMLRVK*YGPGQR
Trigger: CCTTTGCCCTGGACCATATCACTTCACTCTTAACAT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGGATCACCTTCTTTATaGAGTTTTCTTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETGSPSL*SFLSAA
Trigger: TGCTGCAGAAAGAAAACTGCATAAAGAAGGTGATCC...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCTCCTCTTCTTCCACTTaGCCTCATCGATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSSSSST*PHRCCT
Trigger: TGTACAACATCGATGAGGGCAAGTGGAAGAAGAGGA...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCTGGTGGAGTCATCTGTaGCTCTTACAGTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSWWSHL*LLQFSE
Trigger: CTCAGAAAACTGTAAGAGGCACAGATGACTCCACCA...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGAGAAGAAGAACATGTaGTGTTTTCCTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTEKKNM*CFPGSG
Trigger: CCCACTCCCAGGAAAACAGCACATGTTCTTCTTCTC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGCCAGGCGCTTCCACTaGAAGTCCTTGACGTTAGGC +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINARRFH*KSLTLG
Trigger: GCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSKSEVI*SRAKVL
Trigger: CAGTACCTTTGCCCTGGACCATATCACTTCACTCTT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CCA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGAGAAGAAAGTGGTTTaGAACCCCCAATCATTCTCC +
Preference number: 4 (lower is better)
Translates to: NELWLNELRLDIRRTELLEKKVV*NPQSFS
Trigger: GGAGAATGATTGGGGGTTCCAAACCACTTTCTTCTC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACAGACCTCGAAAGCGTTaGCCGCGTACTTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINRPRKR*PRTWTV
Trigger: GACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR GCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGCCAGCCACAAAATCTaGCCGCCGCTTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINASHKI*PPLLEE
Trigger: TTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGCTGCATCTGAATCCTaGTGCAGCCACCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINAASES*CSHLLA
Trigger: AGCTAGGAGGTGGCTGCACCAGGATTCAGATGCAGC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINPGSQS*RRPAYR
Trigger: CCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGCTTGTCCTAGGAGCTaGCTGGGAATAGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAACPRS*LGIESA
Trigger: TGCCGACTCTATTCCCAGCCAGCTCCTAGGACAAGC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR TCA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCATCTTTTGTGGATTTTaGTGCCACAGTGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFIFCGF*CHSVNE
Trigger: CTCATTTACACTGTGGCATCAAAATCCACAAAAGAT...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAATCTTTTGTGGATTTTaGTGCCACAGTGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRIFCGF*CHSVNE
Trigger: CTCATTTACACTGTGGCATCAAAATCCACAAAAGAT...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCCATTTGTTCTTCCCTaGGTGGAATGCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINPFVLP*VECFRR
Trigger: ACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACATTAATCCATCTTTTGTaGATTTTGATGCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETLIHLL*ILMPQC
Trigger: ACACTGTGGCATCAAAATCCACAAAAGATGGATTAA...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGGGGGTGGCAAAAGGTaGAGTGGAATTAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINGGGKR*SGIRRD
Trigger: ATCTCTCCTAATTCCACTTCACCTTTTGCCACCCCC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAGAATGTTGGGAAACTTaGTCCAGGAGCGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAECWET*SRSESR
Trigger: TCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTC...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCCTAGGCTGTACAAGTaGTTGTCCAGGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINPRLYK*LSRVTK
Trigger: CTTTGTGACCCTGGACAACCACTTGTACAGCCTAGG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGATTAATCCATCTTTTGTaGATTTTGATGCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRLIHLL*ILMPQC
Trigger: ACACTGTGGCATCAAAATCCACAAAAGATGGATTAA...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAATGTCACACATGCAGATaGGGAGATGAAGTGAACAGC +
Preference number: 4 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKCHTCR*GDEVNS
Trigger: GCTGTTCACTTCATCTCCTCATCTGCATGTGTGACA...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367156.7
CDS-3UTR TCA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAATCTTTTGTGGATTTTaGTGCCACAGTGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTIFCGF*CHSVNE
Trigger: CTCATTTACACTGTGGCATCAAAATCCACAAAAGAT...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACAAACTAGTTCAGAGCTaGGGAAAGACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINKLVQS*GKTATA
Trigger: TGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAGTTT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR TCA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACATGCCACAGTGTAAATaGGAGGGTTTCACACAGAAA +
Preference number: 4 (lower is better)
Translates to: GAREDRNIDFNHCAAAINMPQCK*EGFTQK
Trigger: TTTCTGTGTGAAACCCTCTCATTTACACTGTGGCAT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCACTGATGAGTTATGAATaGAAGACTAACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EDRNIDFNHCAAAINQSALMSYE*KTNTQS
Trigger: AGACTGCGTGTTAGTCTTCCATTCATAACTCATCAG...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CCA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAATTAATCCATCTTTTGTaGATTTTGATGCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKLIHLL*ILMPQC
Trigger: ACACTGTGGCATCAAAATCCACAAAAGATGGATTAA...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS GCA 90 bp GCACCTCCATGGCAGCCTTGGGGAGCGCCCGGGCGCCGGGAGAGGTaGGAGCGCGGGGGTCCACCGGCTACTTGGCGCCGGCTCCCACGG +
Preference number: 5 (lower is better)
Translates to: APPWQPWGAPGRRER*ERGGPPATWRRLPR
Trigger: CCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCCCCGCGCTCGCACCTCTCCCGGCGCCCGGGCGCTCCCCAAGGCTGCCATGGAGGTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS GCA 90 bp CTCCCGAGCGCCGGACCCAGCCAGACCCCGGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCCGGCGGCGTCCACGCCTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPSAGPSQTPASASP*PESQRSGGVHAWPL
Trigger: CAGCGGCCAGGCGTGGACGCCGCCGGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000607826.1
CDS GCA 90 bp CTCCCGAGCGCCGGACCCAGCCAGACCCCGGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCCGGCGGCGTCCACGCCTGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: LPSAGPSQTPASASP*PESQRSGGVHAWPG
Trigger: TCCGGGCCAGGCGTGGACGCCGCCGGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
CDS CCA 90 bp CCCGGGCGCCGGGAGAGGTGCGAGCGCGGGGGTCCACCGGCTACTTaGCGCCGGCTCCCACGGCCCCTATCGCCACCTCCATCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PGRRERCERGGPPAT*RRLPRPLSPPPSGS
Trigger: GGAGCCAGATGGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCCCCGCGCTCGCACCTCTCCCGGCGCCCGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS GCA 90 bp CTCCATCTGGCTCCCGAGCGCCGGACCCAGCCAGACCCCGGCCAGTaGTTCACCGTGCCCCGAGTCTCAGCGGTCCGGCGGCGTCCACGC +
Preference number: 5 (lower is better)
Translates to: LHLAPERRTQPDPGQ*FTVPRVSAVRRRPR
Trigger: GCGTGGACGCCGCCGGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAGCCAGATGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606111.1
ENST00000606887.5
ENST00000607173.5
ENST00000607826.1
CDS GCA 90 bp AGGAAGGAGAAGCGGAGCCGCCGCCGGGGAGGAGGCCGGCGAGCCTaGTCCGCTCCGTCCCCATCCGCAGCCACCACACCTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: RKEKRSRRRGGGRRA*SAPSPSAATTPVQE
Trigger: TTCCTGCACAGGTGTGGTGGCTGCGGATGGGGACGGAGCGGAGCAGGCTCGCCGGCCTCCTCCCCGGCGGCGGCTCCGCTTCTCCTTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS CCA 90 bp GGCTACTTGGCGCCGGCTCCCACGGCCCCTATCGCCACCTCCATCTaGCTCCCGAGCGCCGGACCCAGCCAGACCCCGGCCAGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GYLAPAPTAPIATSI*LPSAGPSQTPASAS
Trigger: TGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAGCCAGATGGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGCCAAGTAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS TCA 90 bp CCCAGTCCGCGCGCCGCTGTCACACATGCAGATGAGGAGATGAAGTaGACAGCAGGAAGGAGAAGCGGAGCCGCCGCCGGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PSPRAAVTHADEEMK*TAGRRSGAAAGEEA
Trigger: GGCCTCCTCCCCGGCGGCGGCTCCGCTTCTCCTTCCTGCTGTTCACTTCATCTCCTCATCTGCATGTGTGACAGCGGCGCGCGGACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS-3UTR CAA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTACCTCCATGGCAGCCTaGGGGAGCGCCCGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPTSMAA*GSARAP
Trigger: CGGCGCCCGGGCGCTCCCCAAGGCTGCCATGGAGGT...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS TCA 90 bp CCTTCCCCAGTCCGCGCGCCGCTGTCACACATGCAGATGAGGAGATaGAGTGAACAGCAGGAAGGAGAAGCGGAGCCGCCGCCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PSPVRAPLSHMQMRR*SEQQEGEAEPPPGR
Trigger: CCTCCCCGGCGGCGGCTCCGCTTCTCCTTCCTGCTGTTCACTTCATCTCCTCATCTGCATGTGTGACAGCGGCGCGCGGACTGGGGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS CCA 90 bp CGGTCCACTGGTCGGCCTCCGGGGAGTAGACCTCGAAGCAGTCCATaGGGACGCCGTTGTCGTCACATCCCCCGATGGCATAGACCTGGC +
Preference number: 5 (lower is better)
Translates to: RSTGRPPGSRPRSSP*GRRCRHIPRWHRPG
Trigger: GCCAGGTCTATGCCATCGGGGGATGTGACGACAACGGCGTCCCCATGGACTGCTTCGAGGTCTACTCCCCGGAGGCCGACCAGTGGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000607173.5
ENST00000607826.1
CDS CCA 90 bp GGAGAGGGTCGAGCGGGTGTTGGCTCTGAGGCTTGTCCTAGGAGCTaGCTGGGAATAGAGTCGGCAAGGTCCCCAGGGTCCCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: GEGRAGVGSEACPRS*LGIESARSPGSPGL
Trigger: AAGCCCTGGGGACCCTGGGGACCTTGCCGACTCTATTCCCAGCCAGCTCCTAGGACAAGCCTCAGAGCCAACACCCGCTCGACCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS TCA 90 bp CGCTCTGTCCTTCCCCAGTCCGCGCGCCGCTGTCACACATGCAGATaGGGAGATGAAGTGAACAGCAGGAAGGAGAAGCGGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RSVLPQSARRCHTCR*GDEVNSRKEKRSRR
Trigger: GCGGCGGCTCCGCTTCTCCTTCCTGCTGTTCACTTCATCTCCTCATCTGCATGTGTGACAGCGGCGCGCGGACTGGGGAAGGACAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS TCA 90 bp AGGGCTTCCTCCACAATTGATGAGTCCACTGCTGCTGCCTCTGGCTaGTCGACTGGGATGCAGCCAGGCCCCTATGCACAGGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: RASSTIDESTAAASG*STGMQPGPYAQGMG
Trigger: CCCCATGCCCTGTGCATAGGGGCCTGGCTGCATCCCAGTCGATCAGCCAGAGGCAGCAGCAGTGGACTCATCAATTGTGGAGGAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS GCA 90 bp GGGCATGGCAGGGAGGATCTCCCATTTGTTCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGACAGTGGGTTGATTCCCAAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GHGREDLPFVLPWVE*FRRLQDSGLIPKSP
Trigger: GGGGGACTTGGGAATCAACCCACTGTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGGGAGATCCTCCCTGCCATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCTCCATGGGGACGCCGTaGTCGTCACATCCCCCGATG +
Preference number: 5 (lower is better)
Translates to: GERQQQQSILSVRTALPASMGTP*SSHPPM
Trigger: CATCGGGGGATGTGACGACAACGGCGTCCCCATGGA...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTGCGAGGAGGCAGTTCTaGACGACTATGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPARRQF*TTMLEQ
Trigger: CTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCGC...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS CCA 90 bp AGATCTTGGAGCCTCGGAGGAAGGAGGTGGCAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACACCCACATGTCCTTCAGCATGTCAT +
Preference number: 5 (lower is better)
Translates to: RSWSLGGRRWQHISG*AWVLGTPTCPSACH
Trigger: ATGACATGCTGAAGGACATGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAGGCTCCAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS-3UTR CAA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGACCTCCATGGCAGCCTaGGGGAGCGCCCGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: NELWLNELRLDIRRTELLTSMAA*GSARAP
Trigger: CGGCGCCCGGGCGCTCCCCAAGGCTGCCATGGAGGT...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTTCACTCAGACCCTGGTaGACACCTCCCACGGCGAGG +
Preference number: 5 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSSLRPW*TPPTAR
Trigger: CCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGA...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTCAGGAGCTGACATTCTaGGAAGTAGCCCCGACTGCT +
Preference number: 5 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPQELTF*EVAPTA
Trigger: AGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTG...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS GCA 90 bp AAATGCCCATGGCGGCCTCACGCAGCATGCTCCTCTTCTTCCACTTaGCCTCATCGATGTTGTACATCTCCACGACCTTCAGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: KCPWRPHAACSSSST*PHRCCTSPRPSGAA
Trigger: AGCTGCCCCTGAAGGTCGTGGAGATGTACAACATCGATGAGGGCAAGTGGAAGAAGAGGAGCATGCTGCGTGAGGCCGCCATGGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
ENST00000607826.1
CDS-3UTR CAA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAGGGTCCACCGGCTACTaGGCGCCGGCTCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTGSTGY*APAPTA
Trigger: GGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCC...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTAGGCTGTACAAGTGGTaGTCCAGGGTCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPRLYKW*SRVTKL
Trigger: CAGCTTTGTGACCCTGGACAACCACTTGTACAGCCT...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGGCGAGGAGGCAGTTCTaGACGACTATGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWARRQF*TTMLEQ
Trigger: CTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCGC...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CTAGTTCAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTCACTCAGACCCTGGTaGACACCTCCCACGGCGAGG +
Preference number: 5 (lower is better)
Translates to: LVQSWGKTATAVYPLGQNSLRPW*TPPTAR
Trigger: CCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGA...GTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS CCA 90 bp GCAGGCCTCCTAGGCTGTACAAGTGGTTGTCCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGGGAATGTTGGGAAACTTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGLLGCTSGCPGSQS*RRPAYRECWETWSR
Trigger: CCTGGACCAAGTTTCCCAACATTCCCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGGACAACCACTTGTACAGCCTAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGGGAATGTTGGGAAACTaGGTCCAGGAGCGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWGMLGN*VQERVS
Trigger: CGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCC...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGCTCCAGGACAGTGGGTaGATTCCCAAGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRLQDSG*IPKSPS
Trigger: GCTGGGGGACTTGGGAATCAACCCACTGTCCTGGAG...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGCAGCATGTCATAGTGTaGGAGGTGGTTGTGTGGACG +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWQHVIV*EVVVWT
Trigger: CGTCCACACAACCACCTCCAACACTATGACATGCTG...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTGGAATGTTGGGAAACTaGGTCCAGGAGCGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSGMLGN*VQERVS
Trigger: CGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCC...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GTCCAGGGTAGGCCCACAGTTGACCACCAAATGGTGAAGAGATATAAGCCAAGGTCTGCCCGCCGCTTCTaGAGGAAGAACGATCGTTCC +
Preference number: 5 (lower is better)
Translates to: VQGRPTVDHQMVKRYKPRSARRF*RKNDRS
Trigger: GGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGA...CCTTGGCTTATATCTCTTCACCATTTGGTGGTCAACTGTGGGCCTACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGTCTGCCCGCCGCTTCTaGAGGAAGAACGATCGTTCC +
Preference number: 5 (lower is better)
Translates to: WLLTGADILGSSPDCLDKSARRF*RKNDRS
Trigger: GGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGA...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGGCCAGACTCCACTGGTaGCTAACAGGAGCTGACATT +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWARLHW*LTGADI
Trigger: AATGTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGC...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCGCCAGACTCCACTGGTaGCTAACAGGAGCTGACATT +
Preference number: 5 (lower is better)
Translates to: GERQQQQSILSVRTALPAARLHW*LTGADI
Trigger: AATGTCAGCTCCTGTTAGCAACCAGTGGAGTCTGGC...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGAAGGGATTCTTCCTGCCATGGCCTGGGCTGTCCAAGTGAGCCTGACTTCCCTGGAGAAGAAAGTGGTTaGGAACCCCCAATCATTCTC +
Preference number: 5 (lower is better)
Translates to: GRDSSCHGLGCPSEPDFPGEESG*EPPIIL
Trigger: GAGAATGATTGGGGGTTCCAAACCACTTTCTTCTCC...AGGGAAGTCAGGCTCACTTGGACAGCCCAGGCCATGGCAGGAAGAATCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGAGGGTCGAGCGGGTGTaGGCTCTGAGGCTTGTCCTA +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPERVERV*ALRLVL
Trigger: TAGGACAAGCCTCAGAGCCAACACCCGCTCGACCCT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS CCA 90 bp TGTCCAGGGTCACAAAGCTGGAGAAGGCCCGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGCGAGTCTCGATGTCAAAGACCTCGA +
Preference number: 5 (lower is better)
Translates to: CPGSQSWRRPAYREC*ETWSRSESRCQRPR
Trigger: TCGAGGTCTTTGACATCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS-3UTR CAA 90 bp CAGAGCTGGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTTTCCACTGGAAGTCCTaGACGTTAGGCACCTCCATG +
Preference number: 5 (lower is better)
Translates to: QSWGKTATAVYPLGQNCSFHWKS*TLGTSM
Trigger: CATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAA...AGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCTCCATGGGGACGCCGTaGTCGTCACATCCCCCGATG +
Preference number: 5 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFSMGTP*SSHPPM
Trigger: CATCGGGGGATGTGACGACAACGGCGTCCCCATGGA...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGTTGCCCTCATCGATGTaGTACATCTCCACGACCTTC +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWLPSSM*YISTTF
Trigger: GAAGGTCGTGGAGATGTACAACATCGATGAGGGCAA...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGGCGAGGAGGCAGTTCTaGACGACTATGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEARRQF*TTMLEQ
Trigger: CTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCGC...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCATCACTCAGACCCTGGTaGACACCTCCCACGGCGAGG +
Preference number: 5 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPSLRPW*TPPTAR
Trigger: CCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGA...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGGGTCCACCGGCTACTaGGCGCCGGCTCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GAREDRNIDFNHCAAAINGSTGY*APAPTA
Trigger: GGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGAGGCTGTACAAGTGGTaGTCCAGGGTCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: WLLTGADILGSSPDCLDKRLYKW*SRVTKL
Trigger: CAGCTTTGTGACCCTGGACAACCACTTGTACAGCCT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCCTCCAGGACAGTGGGTaGATTCCCAAGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFLQDSG*IPKSPS
Trigger: GCTGGGGGACTTGGGAATCAACCCACTGTCCTGGAG...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGGGAAAGACAGCAACAGCAGTCTATCCTCTCGGTCAGAACTGCTCTACCTGCCCAGTCACTTATGTCCTaGAATCTGAGTGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: GERQQQQSILSVRTALPAQSLMS*NLSVLI
Trigger: GATGAGGACACTCAGATTCAAGGACATAAGTGACTG...GGCAGGTAGAGCAGTTCTGACCGAGAGGATAGACTGCTGTTGCTGTCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGTTCCACTGGAAGTCCTaGACGTTAGGCACCTCCATG +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEFHWKS*TLGTSM
Trigger: CATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAA...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGAAGACCTCGAAAGCGTaGACCGCGTACTTGGACTGT +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEKTSKA*TAYLDC
Trigger: ACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCTT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGAGGCTGTACAAGTGGTaGTCCAGGGTCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPERLYKW*SRVTKL
Trigger: CAGCTTTGTGACCCTGGACAACCACTTGTACAGCCT...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCATCTGCCCGCCGCTTCTaGAGGAAGAACGATCGTTCC +
Preference number: 5 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPSARRF*RKNDRS
Trigger: GGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGA...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp CTGCTGATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGATCTGCCCGCCGCTTCTaGAGGAAGAACGATCGTTCC +
Preference number: 5 (lower is better)
Translates to: LLMSYEWKTNTQSQGRRRSARRF*RKNDRS
Trigger: GGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGA...TCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCATCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTCCAGGACAGTGGGTaGATTCCCAAGTCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLQDSG*IPKSPS
Trigger: GCTGGGGGACTTGGGAATCAACCCACTGTCCTGGAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGAGTAGCCCCGACTGCTaGGACAAGATCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WLLTGADILGSSPDCLDKSSPDC*DKIIPH
Trigger: ATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACT...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACAGGAGCTGACATTCTaGGAAGTAGCCCCGACTGCT +
Preference number: 5 (lower is better)
Translates to: SAAGGVICASYSFLRLVGQELTF*EVAPTA
Trigger: AGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACACAGCATGTCATAGTGTaGGAGGTGGTTGTGTGGACG +
Preference number: 5 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETQHVIV*EVVVWT
Trigger: CGTCCACACAACCACCTCCAACACTATGACATGCTG...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAAAGACCTCGAAAGCGTaGACCGCGTACTTGGACTGT +
Preference number: 5 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETKTSKA*TAYLDC
Trigger: ACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCTT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCGGAATGTTGGGAAACTaGGTCCAGGAGCGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFGMLGN*VQERVS
Trigger: CGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCC...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGGAATGTTGGGAAACTaGGTCCAGGAGCGAGTCTCG +
Preference number: 5 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPGMLGN*VQERVS
Trigger: CGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCC...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGCGAGGAGGCAGTTCTaGACGACTATGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSARRQF*TTMLEQ
Trigger: CTGCTCCAGCATAGTCGTCAAGAACTGCCTCCTCGC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS CCA 90 bp GACTGCTTGGACAAGATCATTCCTCATGTTAAGAGTGAAGTGATATaGTCCAGGGCAAAGGTACTGAGCCCAGAGACAGCTAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: DCLDKIIPHVKSEVI*SRAKVLSPETARSQ
Trigger: CTGACTCCTAGCTGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGATCTTGTCCAAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGTTGCTAACAGGAGCTGACATTCTTGGAAGTAGCCCCGACTGCTTGGACAAGCAGTCACTTATGTCCTaGAATCTGAGTGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: WLLTGADILGSSPDCLDKQSLMS*NLSVLI
Trigger: GATGAGGACACTCAGATTCAAGGACATAAGTGACTG...CTTGTCCAAGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTGTTAGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACATTGCCCTCATCGATGTaGTACATCTCCACGACCTTC +
Preference number: 5 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETLPSSM*YISTTF
Trigger: GAAGGTCGTGGAGATGTACAACATCGATGAGGGCAA...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGACTCCTCTTCTTCCACTaGCCCTCATCGATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SAAGGVICASYSFLRLVGLLFFH*PSSMLY
Trigger: GTACAACATCGATGAGGGCAAGTGGAAGAAGAGGAG...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAAGGCTGTACAAGTGGTaGTCCAGGGTCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPRLYKW*SRVTKL
Trigger: CAGCTTTGTGACCCTGGACAACCACTTGTACAGCCT...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp ATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGGGAGGATCTCCCATTaGTTCTTCCCTGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: IPHVKSEVIWSRAKVLSPGRISH*FFPGWN
Trigger: ATTCCACCCAGGGAAGAACAAATGGGAGATCCTCCC...TGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCGGGAGGATCTCCCATTaGTTCTTCCCTGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFGRISH*FFPGWN
Trigger: ATTCCACCCAGGGAAGAACAAATGGGAGATCCTCCC...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACAAGAATGCAGGAGGGATaGTTTTATGGGGTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETRMQEG*FYGVLP
Trigger: AGGGAGGACCCCATAAAACAATCCCTCCTGCATTCT...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTTCACACAGAAACACTCTGGGGGCCTTCGGTGACAAAAGGGCTAGGCCTCTGGAGAACCCTTTCTACTTaGGATAGGACAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: FHTETLWGPSVTKGLGLWRTLST*DRTKMS
Trigger: GCTCATTTTTGTCCTATCCAAAGTAGAAAGGGTTCT...CCAGAGGCCTAGCCCTTTTGTCACCGAAGGCCCCCAGAGTGTTTCTGTGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCGGGCTTCCTCCACAATaGATGAGTCCACTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSGLPPQ*MSPLLL
Trigger: CAGCAGCAGTGGACTCATCAATTGTGGAGGAAGCCC...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367155.8
CDS-3UTR CAA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGAAAGGGGCTGTCCTTaGCAACGCTGCCAGTTATGC +
Preference number: 5 (lower is better)
Translates to: NELWLNELRLDIRRTELLERGCP*QRCQLC
Trigger: GCATAACTGGCAGCGTTGCAAAGGACAGCCCCTTTC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539253.5
CDS TCA 90 bp ATTATGCACCAGTCACTTATGTCCTTGAATCTGAGTGTCCTCATCTaGCTGGAGGGAAAAGGATCGACACCCGGCGATCATCTGCAAAAG +
Preference number: 5 (lower is better)
Translates to: IMHQSLMSLNLSVLI*LEGKGSTPGDHLQK
Trigger: CTTTTGCAGATGATCGCCGGGTGTCGATCCTTTTCCCTCCAGTCAGATGAGGACACTCAGATTCAAGGACATAAGTGACTGGTGCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460687.5
ENST00000491471.5
ENST00000607193.1
CDS-3UTR CAA 90 bp CCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGCAGTCACTTATGTCCTaGAATCTGAGTGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: PHVKSEVIWSRAKVLSPEQSLMS*NLSVLI
Trigger: GATGAGGACACTCAGATTCAAGGACATAAGTGACTG...CTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS-3UTR CAA 90 bp TGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACATGTGCTGTTTTCTTGCCCTCATCGATGTaGTACATCTCCACGACCTTC +
Preference number: 5 (lower is better)
Translates to: WKTNTQSQGRRRRTCAVFLPSSM*YISTTF
Trigger: GAAGGTCGTGGAGATGTACAACATCGATGAGGGCAA...GAAAACAGCACATGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACACAGGAGCTGACATTCTaGGAAGTAGCCCCGACTGCT +
Preference number: 5 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTQELTF*EVAPTA
Trigger: AGCAGTCGGGGCTACTTCCAAGAATGTCAGCTCCTG...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCATCCATGGGGACGCCGTaGTCGTCACATCCCCCGATG +
Preference number: 5 (lower is better)
Translates to: EDRNIDFNHCAAAINQSASMGTP*SSHPPM
Trigger: CATCGGGGGATGTGACGACAACGGCGTCCCCATGGA...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCTCCTCTTCTTCCACTaGCCCTCATCGATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSLLFFH*PSSMLY
Trigger: GTACAACATCGATGAGGGCAAGTGGAAGAAGAGGAG...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATGAGTTATGAATGGAAGACTAACACGCAGTCTCAAGGCAGGAGAAGAAGAACAAAGACCTCGAAAGCGTaGACCGCGTACTTGGACTGT +
Preference number: 5 (lower is better)
Translates to: MSYEWKTNTQSQGRRRRTKTSKA*TAYLDC
Trigger: ACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCTT...TGTTCTTCTTCTCCTGCCTTGAGACTGCGTGTTAGTCTTCCATTCATAACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCATCACTCAGACCCTGGTaGACACCTCCCACGGCGAGG +
Preference number: 5 (lower is better)
Translates to: EDRNIDFNHCAAAINQSASLRPW*TPPTAR
Trigger: CCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGA...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp ATCATTCCTCATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCAGAATGCAGGAGGGATaGTTTTATGGGGTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: IIPHVKSEVIWSRAKVLSRMQEG*FYGVLP
Trigger: AGGGAGGACCCCATAAAACAATCCCTCCTGCATTCT...GCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATGAGGAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS TCA 90 bp ATTATGCACCAGTCACTTATGTCCTTGAATCTGAGTGTCCTCATCTaGCTGGAGGGAAAAGGATCGACACCCGGCGATCATCAACAAAAA +
Preference number: 5 (lower is better)
Translates to: IMHQSLMSLNLSVLI*LEGKGSTPGDHQQK
Trigger: TTTTTGTTGATGATCGCCGGGTGTCGATCCTTTTCCCTCCAGTCAGATGAGGACACTCAGATTCAAGGACATAAGTGACTGGTGCATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000539253.5
ENST00000606887.5
CDS-3UTR CAA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGGGAGAAGAAAGTGGTTaGGAACCCCCAATCATTCTC +
Preference number: 5 (lower is better)
Translates to: NELWLNELRLDIRRTELLGEESG*EPPIIL
Trigger: GAGAATGATTGGGGGTTCCAAACCACTTTCTTCTCC...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp CATGTTAAGAGTGAAGTGATATGGTCCAGGGCAAAGGTACTGAGCCCAGAGACATACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 5 (lower is better)
Translates to: HVKSEVIWSRAKVLSPETYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...TGTCTCTGGGCTCAGTACCTTTGCCCTGGACCATATCACTTCACTCTTAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TCTGCAGCTGGTGGAGTCATCTGTGCCTCTTACAGTTTTCTGAGATTGGTAGGATACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 5 (lower is better)
Translates to: SAAGGVICASYSFLRLVGYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...TCCTACCAATCTCAGAAAACTGTAAGAGGCACAGATGACTCCACCAGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACTTCCACTGGAAGTCCTaGACGTTAGGCACCTCCATG +
Preference number: 5 (lower is better)
Translates to: GAREDRNIDFNHCAAAINFHWKS*TLGTSM
Trigger: CATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAA...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAACAGCATGTCATAGTGTaGGAGGTGGTTGTGTGGACG +
Preference number: 5 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKQHVIV*EVVVWT
Trigger: CGTCCACACAACCACCTCCAACACTATGACATGCTG...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCAGAGTGCAAAGACCTCGAAAGCGTaGACCGCGTACTTGGACTGT +
Preference number: 5 (lower is better)
Translates to: EDRNIDFNHCAAAINQSAKTSKA*TAYLDC
Trigger: ACAGTCCAAGTACGCGGTCAACGCTTTCGAGGTCTT...TGCACTCTGGTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACGGGAGGATCTCCCATTaGTTCTTCCCTGGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: GAREDRNIDFNHCAAAINGRISH*FFPGWN
Trigger: ATTCCACCCAGGGAAGAACAAATGGGAGATCCTCCC...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp AATGAGCTTTGGCTGAATGAACTGAGACTAGACATAAGAAGGACTGAGCTGCTGAGAACCCTTTCTACTTaGGATAGGACAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: NELWLNELRLDIRRTELLRTLST*DRTKMS
Trigger: GCTCATTTTTGTCCTATCCAAAGTAGAAAGGGTTCT...CAGCAGCTCAGTCCTTCTTATGTCTAGTCTCAGTTCATTCAGCCAAAGCTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACCTCCTCTTCTTCCACTaGCCCTCATCGATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GAREDRNIDFNHCAAAINLLFFH*PSSMLY
Trigger: GTACAACATCGATGAGGGCAAGTGGAAGAAGAGGAG...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAAAGTAGCCCCGACTGCTaGGACAAGATCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKSSPDC*DKIIPH
Trigger: ATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACT...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp GGTGCTAGAGAAGATAGGAATATAGATTTTAATCATTGTGCTGCTGCTATTAACAGTAGCCCCGACTGCTaGGACAAGATCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GAREDRNIDFNHCAAAINSSPDC*DKIIPH
Trigger: ATGAGGAATGATCTTGTCCAAGCAGTCGGGGCTACT...GTTAATAGCAGCAGCACAATGATTAAAATCTATATTCCTATCTTCTCTAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAAGGAGAAGAAAGTGGTTaGGAACCCCCAATCATTCTC +
Preference number: 5 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKGEESG*EPPIIL
Trigger: GAGAATGATTGGGGGTTCCAAACCACTTTCTTCTCC...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAAAGAACCCTTTCTACTTaGGATAGGACAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKRTLST*DRTKMS
Trigger: GCTCATTTTTGTCCTATCCAAAGTAGAAAGGGTTCT...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS-3UTR CAA 90 bp TTAACCAGAGTGCAATTAATCCATCTTTTGTGGATTTTGATGCCACAGTGTAAATACAGTTTTCTGAGATaGGTAGGATTTGGAGCTATA +
Preference number: 5 (lower is better)
Translates to: LTRVQLIHLLWILMPQCKYSFLR*VGFGAI
Trigger: TATAGCTCCAAATCCTACCAATCTCAGAAAACTGTA...TTTACACTGTGGCATCAAAATCCACAAAAGATGGATTAATTGCACTCTGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
CDS CCA 72 bp GCGCCGGCTCCCACGGCCCCTATCGCCACCTCCATCTaGCTCCCGAGCGCCGGACCCAGCCAGACCCCGGCC +
Preference number: 6 (lower is better)
Translates to: APAPTAPIATSI*LPSAGPSQTPA
Trigger: GGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAGCCAGATGGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS CAA 90 bp GCCCGGGCGCCGGGAGAGGTGCGAGCGCGGGGGTCCACCGGCTACTaGGCGCCGGCTCCCACGGCCCCTATCGCCACCTCCATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: ARAPGEVRARGSTGY*APAPTAPIATSIWL
Trigger: GAGCCAGATGGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCCCCGCGCTCGCACCTCTCCCGGCGCCCGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS GCA 72 bp GCCGGACCCAGCCAGACCCCGGCCAGTGCTTCACCGTaGCCCGAGTCTCAGCGGTCCGGCGGCGTCCACGCC +
Preference number: 6 (lower is better)
Translates to: AGPSQTPASASP*PESQRSGGVHA
Trigger: GGCGTGGACGCCGCCGGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606111.1
ENST00000606887.5
ENST00000607173.5
ENST00000607826.1
CDS GCA 72 bp GCTCCCGAGCGCCGGACCCAGCCAGACCCCGGCCAGTaGTTCACCGTGCCCCGAGTCTCAGCGGTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: APERRTQPDPGQ*FTVPRVSAVRR
Trigger: CCGCCGGACCGCTGAGACTCGGGGCACGGTGAAGCACTGGCCGGGGTCTGGCTGGGTCCGGCGCTCGGGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606111.1
ENST00000606887.5
ENST00000607173.5
ENST00000607826.1
CDS CAA 72 bp CCGGGAGAGGTGCGAGCGCGGGGGTCCACCGGCTACTaGGCGCCGGCTCCCACGGCCCCTATCGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: PGEVRARGSTGY*APAPTAPIATS
Trigger: GGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCCCCGCGCTCGCACCTCTCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS CCA 72 bp CGGGAGAGGTGCGAGCGCGGGGGTCCACCGGCTACTTaGCGCCGGCTCCCACGGCCCCTATCGCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: RERCERGGPPAT*RRLPRPLSPPP
Trigger: TGGAGGTGGCGATAGGGGCCGTGGGAGCCGGCGCCAAGTAGCCGGTGGACCCCCGCGCTCGCACCTCTCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS CAA 90 bp ACCCGGCGGCTGGGCAGTGGCGCCAGGCGCTTCCACTGGAAGTCCTaGACGTTAGGCACCTCCATGGCAGCCTTGGGGAGCGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: TRRLGSGARRFHWKS*TLGTSMAALGSARA
Trigger: CGCCCGGGCGCTCCCCAAGGCTGCCATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGCGCCACTGCCCAGCCGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS CCA 72 bp CCCCGGTCTCCAGCAGGGAGCAGTAGACCCGGCGGCTaGGCAGTGGCGCCAGGCGCTTCCACTGGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: PRSPAGSSRPGG*AVAPGASTGSP
Trigger: AGGACTTCCAGTGGAAGCGCCTGGCGCCACTGCCCAGCCGCCGGGTCTACTGCTCCCTGCTGGAGACCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000607173.5
ENST00000607826.1
CDS CCA 72 bp ACCCGGCGGCTGGGCAGTGGCGCCAGGCGCTTCCACTaGAAGTCCTTGACGTTAGGCACCTCCATGGCAGCC +
Preference number: 6 (lower is better)
Translates to: TRRLGSGARRFH*KSLTLGTSMAA
Trigger: GGCTGCCATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGCGCCACTGCCCAGCCGCCGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS GCA 72 bp CTGTGCAGGAATCCGCGTGCGTCCCGGGACACAGCGTaGTGTGACCTCTGTACAGAAGCCCCGCCGCGGAAG +
Preference number: 6 (lower is better)
Translates to: LCRNPRASRDTA*CDLCTEAPPRK
Trigger: CTTCCGCGGCGGGGCTTCTGTACAGAGGTCACAGCACGCTGTGTCCCGGGACGCACGCGGATTCCTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS CCA 72 bp ACCCGGCGGCTGGGCAGTGGCGCCAGGCGCTTCCACTaGAAGTCCTTGACGTTAGGCACCTCCATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TRRLGSGARRFH*KSLTLGTSIWL
Trigger: GAGCCAGATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGCGCCACTGCCCAGCCGCCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607826.1
CDS CCA 72 bp GGTCGGCCTCCGGGGAGTAGACCTCGAAGCAGTCCATaGGGACGCCGTTGTCGTCACATCCCCCGATGGCAT +
Preference number: 6 (lower is better)
Translates to: GRPPGSRPRSSP*GRRCRHIPRWH
Trigger: ATGCCATCGGGGGATGTGACGACAACGGCGTCCCCATGGACTGCTTCGAGGTCTACTCCCCGGAGGCCGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000607173.5
ENST00000607826.1
CDS CAA 72 bp CTGGGCAGTGGCGCCAGGCGCTTCCACTGGAAGTCCTaGACGTTAGGCACCTCCATGGCAGCCTTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LGSGARRFHWKS*TLGTSMAALGS
Trigger: GCTCCCCAAGGCTGCCATGGAGGTGCCTAACGTCAAGGACTTCCAGTGGAAGCGCCTGGCGCCACTGCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607173.5
CDS CAA 72 bp AAGAAGGGGAGGGGCCGGGAGAGGGTCGAGCGGGTGTaGGCTCTGAGGCTTGTCCTAGGAGCTGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: KKGRGRERVERV*ALRLVLGAGWE
Trigger: TTCCCAGCCAGCTCCTAGGACAAGCCTCAGAGCCAACACCCGCTCGACCCTCTCCCGGCCCCTCCCCTTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS TCA 72 bp CGCGCCGCTGTCACACATGCAGATGAGGAGATGAAGTaGACAGCAGGAAGGAGAAGCGGAGCCGCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: RAAVTHADEEMK*TAGRRSGAAAG
Trigger: CCCGGCGGCGGCTCCGCTTCTCCTTCCTGCTGTTCACTTCATCTCCTCATCTGCATGTGTGACAGCGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367156.7
ENST00000606111.1
ENST00000606529.5
CDS CCA 72 bp GTTCCATGTCGAACACGTCCATCGTCCGCAGGAACTTaGGCTGCCGGTAGAGGCGACCTTGCCGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: VPCRTRPSSAGT*AAGRGDLAAGL
Trigger: GAGGCCTGCGGCAAGGTCGCCTCTACCGGCAGCCCAAGTTCCTGCGGACGATGGACGTGTTCGACATGGAAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CCA 72 bp CGAGCGGGTGTTGGCTCTGAGGCTTGTCCTAGGAGCTaGCTGGGAATAGAGTCGGCAAGGTCCCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: RAGVGSEACPRS*LGIESARSPGS
Trigger: GGACCCTGGGGACCTTGCCGACTCTATTCCCAGCCAGCTCCTAGGACAAGCCTCAGAGCCAACACCCGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS CCA 72 bp AGGCGACCTTGCCGCAGGCCTCCTAGGCTGTACAAGTaGTTGTCCAGGGTCACAAAGCTGGAGAAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: RRPCRRPPRLYK*LSRVTKLEKAR
Trigger: GCGGGCCTTCTCCAGCTTTGTGACCCTGGACAACCACTTGTACAGCCTAGGAGGCCTGCGGCAAGGTCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CCA 72 bp GAGACACACAGGGCCTCCACTGCGTCACTCAGACCCTaGTTGACACCTCCCACGGCGAGGAGGCAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: ETHRASTASLRP*LTPPTARRQFL
Trigger: CAAGAACTGCCTCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS CAA 72 bp ACACACAGGGCCTCCACTGCGTCACTCAGACCCTGGTaGACACCTCCCACGGCGAGGAGGCAGTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: THRASTASLRPW*TPPTARRQFLT
Trigger: CGTCAAGAACTGCCTCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS CCA 72 bp AGCCTCGGAGGAAGGAGGTGGCAGCATATCTCGGGGTaGGCATGGGTGCTAGGGACACCCACATGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SLGGRRWQHISG*AWVLGTPTCPS
Trigger: TGAAGGACATGTGGGTGTCCCTAGCACCCATGCCCACCCCGAGATATGCTGCCACCTCCTTCCTCCGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CAA 90 bp GAGTCAGAGACACACAGGGCCTCCACTGCGTCACTCAGACCCTGGTaGACACCTCCCACGGCGAGGAGGCAGTTCTTGACGACTATGCTG +
Preference number: 6 (lower is better)
Translates to: ESETHRASTASLRPW*TPPTARRQFLTTML
Trigger: CAGCATAGTCGTCAAGAACTGCCTCCTCGCCGTGGGAGGTGTCAACCAGGGTCTGAGTGACGCAGTGGAGGCCCTGTGTGTCTCTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS CAA 90 bp ATAGAGTCGGCAAGGTCCCCAGGGTCCCCAGGGCTTCCTCCACAATaGATGAGTCCACTGCTGCTGCCTCTGGCTGATCGACTGGGATGC +
Preference number: 6 (lower is better)
Translates to: IESARSPGSPGLPPQ*MSPLLLPLADRLGC
Trigger: GCATCCCAGTCGATCAGCCAGAGGCAGCAGCAGTGGACTCATCAATTGTGGAGGAAGCCCTGGGGACCCTGGGGACCTTGCCGACTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS CAA 72 bp CGACCTTGCCGCAGGCCTCCTAGGCTGTACAAGTGGTaGTCCAGGGTCACAAAGCTGGAGAAGGCCCGCTTA +
Preference number: 6 (lower is better)
Translates to: RPCRRPPRLYKW*SRVTKLEKARL
Trigger: TAAGCGGGCCTTCTCCAGCTTTGTGACCCTGGACAACCACTTGTACAGCCTAGGAGGCCTGCGGCAAGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CAA 90 bp GAAATGCCCATGGCGGCCTCACGCAGCATGCTCCTCTTCTTCCACTaGCCCTCATCGATGTTGTACATCTCCACGACCTTCAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EMPMAASRSMLLFFH*PSSMLYISTTFRGS
Trigger: GCTGCCCCTGAAGGTCGTGGAGATGTACAACATCGATGAGGGCAAGTGGAAGAAGAGGAGCATGCTGCGTGAGGCCGCCATGGGCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
ENST00000607826.1
CDS TCA 72 bp TCGATGTTGTACATCTCCACGACCTTCAGGGGCAGCTaGTTGGTGCCCACGCCCCCAATCACCATGATCCGC +
Preference number: 6 (lower is better)
Translates to: SMLYISTTFRGS*LVPTPPITMIR
Trigger: GCGGATCATGGTGATTGGGGGCGTGGGCACCAATCAGCTGCCCCTGAAGGTCGTGGAGATGTACAACATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000539253.5
ENST00000607826.1
CDS TCA 72 bp TCCACAATTGATGAGTCCACTGCTGCTGCCTCTGGCTaGTCGACTGGGATGCAGCCAGGCCCCTATGCACAG +
Preference number: 6 (lower is better)
Translates to: STIDESTAAASG*STGMQPGPYAQ
Trigger: CTGTGCATAGGGGCCTGGCTGCATCCCAGTCGATCAGCCAGAGGCAGCAGCAGTGGACTCATCAATTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000491471.5
ENST00000606529.5
ENST00000607193.1
CDS TCA 72 bp GGACAGTGGGTTGATTCCCAAGTCCCCCAGCCACTATaGCCCGTCCACTCAGAGAGCCAGCCACAAAATCTG +
Preference number: 6 (lower is better)
Translates to: GQWVDSQVPQPL*PVHSESQPQNL
Trigger: CAGATTTTGTGGCTGGCTCTCTGAGTGGACGGGTCATAGTGGCTGGGGGACTTGGGAATCAACCCACTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS GCA 72 bp AGGGAGGATCTCCCATTTGTTCTTCCCTGGGTGGAATaGTTCCGCCGTCTCCAGGACAGTGGGTTGATTCCC +
Preference number: 6 (lower is better)
Translates to: REDLPFVLPWVE*FRRLQDSGLIP
Trigger: GGGAATCAACCCACTGTCCTGGAGACGGCGGAAGCATTCCACCCAGGGAAGAACAAATGGGAGATCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
CDS TCA 72 bp TCAGAGAGCCAGCCACAAAATCTGCCCGCCGCTTCTTaGGGAAGAACGATCGTTCCATCTTCAGCCATCCCC +
Preference number: 6 (lower is better)
Translates to: SESQPQNLPAAS*GRTIVPSSAIP
Trigger: GGGGATGGCTGAAGATGGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGCTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CAA 72 bp CTCAGAGAGCCAGCCACAAAATCTGCCCGCCGCTTCTaGAGGAAGAACGATCGTTCCATCTTCAGCCATCCC +
Preference number: 6 (lower is better)
Translates to: LREPATKSARRF*RKNDRSIFSHP
Trigger: GGGATGGCTGAAGATGGAACGATCGTTCTTCCTCAAGAAGCGGCGGGCAGATTTTGTGGCTGGCTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS TCA 72 bp CACAGACCATGTGGTCAGCATCAGACAGGCTGCATCTaGATCCTGGTGCAGCCACCTCCTAGCTGTGTGATT +
Preference number: 6 (lower is better)
Translates to: HRPCGQHQTGCI*ILVQPPPSCVI
Trigger: AATCACACAGCTAGGAGGTGGCTGCACCAGGATTCAGATGCAGCCTGTCTGATGCTGACCACATGGTCTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367156.7
ENST00000460687.5
ENST00000491471.5
ENST00000539253.5
ENST00000606887.5
ENST00000607193.1
CDS CCA 72 bp TGGAGAAGGCCCGCTTATAGGGAATGTTGGGAAACTTaGTCCAGGAGCGAGTCTCGATGTCAAAGACCTCGA +
Preference number: 6 (lower is better)
Translates to: WRRPAYRECWET*SRSESRCQRPR
Trigger: TCGAGGTCTTTGACATCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGCGGGCCTTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CCA 72 bp TCACAAAGCTGGAGAAGGCCCGCTTATAGGGAATGTTaGGAAACTTGGTCCAGGAGCGAGTCTCGATGTCAA +
Preference number: 6 (lower is better)
Translates to: SQSWRRPAYREC*ETWSRSESRCQ
Trigger: TTGACATCGAGACTCGCTCCTGGACCAAGTTTCCCAACATTCCCTATAAGCGGGCCTTCTCCAGCTTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1
CDS CCA 72 bp CTAGGCTGTACAAGTGGTTGTCCAGGGTCACAAAGCTaGAGAAGGCCCGCTTATAGGGAATGTTGGGAAACT +
Preference number: 6 (lower is better)
Translates to: LGCTSGCPGSQS*RRPAYRECWET
Trigger: AGTTTCCCAACATTCCCTATAAGCGGGCCTTCTCCAGCTTTGTGACCCTGGACAACCACTTGTACAGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367155.8
ENST00000367156.7
ENST00000460687.5
ENST00000539253.5
ENST00000606181.1