Pregenerated sensors for KLHDC7B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272666Ensembl transcript IDs: ENST00000609178.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GATGGTGGGAGAATGGGAACTGAGCTGAGAGAGCTTCCGGAAGGTTaGGGTGGCCTAGGGCGATCCACGTCATTGAGAAACGGCGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: DGGRMGTELRELPEG*GGLGRSTSLRNGVR Trigger: CCTAACGCCGTTTCTCAATGACGTGGATCGCCCTAGGCCACCGCAACCTTCCGGAAGCTCTCTCAGCTCAGTTCCCATTCTCCCACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS TCA 90 bp | TCCACGTCATTGAGAAACGGCGTTAGGCTGATTTCACGGGGCAGATaGCATGGAAGTGCTGCTGAGGAAGACGCTGAGCTCCGAGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: STSLRNGVRLISRGR*HGSAAEEDAELRGE Trigger: TTCACCTCGGAGCTCAGCGTCTTCCTCAGCAGCACTTCCATGTCATCTGCCCCGTGAAATCAGCCTAACGCCGTTTCTCAATGACGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS GCA 90 bp | CCTAGTGCAGTTTCTTTTGCTGTCACCAGGGCCATCTTGCTGGCTTaGCACAGGTTATGTGATAATGACTGGGCATCATTCATGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: PSAVSFAVTRAILLA*HRLCDNDWASFMGN Trigger: GTTTCCCATGAATGATGCCCAGTCATTATCACATAACCTGTGGCAAGCCAGCAAGATGGCCCTGGTGACAGCAAAAGAAACTGCACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS GCA 90 bp | ATTCAGGTCCTAGTGCAGTTTCTTTTGCTGTCACCAGGGCCATCTTaGTGGCTTGCCACAGGTTATGTGATAATGACTGGGCATCATTCA | + |
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Preference number: 5 (lower is better) Translates to: IQVLVQFLLLSPGPS*WLATGYVIMTGHHS Trigger: TGAATGATGCCCAGTCATTATCACATAACCTGTGGCAAGCCAGCAAGATGGCCCTGGTGACAGCAAAAGAAACTGCACTAGGACCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS CAA 72 bp | CCGGAAGGTTGCGGTGGCCTAGGGCGATCCACGTCATaGAGAAACGGCGTTAGGCTGATTTCACGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PEGCGGLGRSTS*RNGVRLISRGR Trigger: TCTGCCCCGTGAAATCAGCCTAACGCCGTTTCTCAATGACGTGGATCGCCCTAGGCCACCGCAACCTTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS TCA 72 bp | AGAAGGAGAACCAAGAGATGGTGGGAGAATGGGAACTaGGCTGAGAGAGCTTCCGGAAGGTTGCGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RRRTKRWWENGN*AERASGRLRWP Trigger: AGGCCACCGCAACCTTCCGGAAGCTCTCTCAGCTCAGTTCCCATTCTCCCACCATCTCTTGGTTCTCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS GCA 72 bp | AGAATGGGAACTGAGCTGAGAGAGCTTCCGGAAGGTTaGGGTGGCCTAGGGCGATCCACGTCATTGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RMGTELRELPEG*GGLGRSTSLRN Trigger: GTTTCTCAATGACGTGGATCGCCCTAGGCCACCGCAACCTTCCGGAAGCTCTCTCAGCTCAGTTCCCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS CCA 72 bp | GCCACAGGTTATGTGATAATGACTGGGCATCATTCATaGGAAACTGCACTGCGTAAGCAGGCCTGGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATGYVIMTGHHS*ETALRKQAWLG Trigger: GCCTAGCCAGGCCTGCTTACGCAGTGCAGTTTCCCATGAATGATGCCCAGTCATTATCACATAACCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS TCA 72 bp | ACATTTTCAGCTGCGAAGCGGAGGACTAGCAACCGGTaGGGTAGAAGGAGAACCAAGAGATGGTGGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TFSAAKRRTSNR*GRRRTKRWWEN Trigger: ATTCTCCCACCATCTCTTGGTTCTCCTTCTACCTCACCGGTTGCTAGTCCTCCGCTTCGCAGCTGAAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS GCA 72 bp | CTAGTGCAGTTTCTTTTGCTGTCACCAGGGCCATCTTaGTGGCTTGCCACAGGTTATGTGATAATGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: LVQFLLLSPGPS*WLATGYVIMTG Trigger: CCCAGTCATTATCACATAACCTGTGGCAAGCCAGCAAGATGGCCCTGGTGACAGCAAAAGAAACTGCACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS CAA 72 bp | CCTAGTGCAGTTTCTTTTGCTGTCACCAGGGCCATCTaGCTGGCTTGCCACAGGTTATGTGATAATGACTGG | + |
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Preference number: 6 (lower is better) Translates to: PSAVSFAVTRAI*LACHRLCDNDW Trigger: CCAGTCATTATCACATAACCTGTGGCAAGCCAGCAAGATGGCCCTGGTGACAGCAAAAGAAACTGCACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS CAA 90 bp | CATTCAGGTCCTAGTGCAGTTTCTTTTGCTGTCACCAGGGCCATCTaGCTGGCTTGCCACAGGTTATGTGATAATGACTGGGCATCATTC | + |
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Preference number: 6 (lower is better) Translates to: HSGPSAVSFAVTRAI*LACHRLCDNDWASF Trigger: GAATGATGCCCAGTCATTATCACATAACCTGTGGCAAGCCAGCAAGATGGCCCTGGTGACAGCAAAAGAAACTGCACTAGGACCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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| CDS TCA 72 bp | ATGGTTGCAAAACGTGCTGTTAGTAAGGAACATGACTaGGATCTACATTCAGGTCCTAGTGCAGTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: MVAKRAVSKEHD*DLHSGPSAVSF Trigger: AAAAGAAACTGCACTAGGACCTGAATGTAGATCTCAGTCATGTTCCTTACTAACAGCACGTTTTGCAACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609178.1 |
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