RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHDC7A (Homo sapiens)

Ensembl gene IDs: ENSG00000179023

Ensembl transcript IDs: ENST00000400664.3

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCGGAATTCACCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTaGCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGG +
Preference number: 1 (lower is better)
Translates to: DRNSPLDGHIPGLPV*LEMAPRGTAGSGAR
Trigger: CCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp TCAGGCCCTGCTCTGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTaGGACCAAGAGCATCACTGCCTTCCCATCTGTCACTGTCTCCCT +
Preference number: 1 (lower is better)
Translates to: SGPALVYLPSPLASG*DQEHHCLPICHCLP
Trigger: AGGGAGACAGTGACAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCAGAGCAGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 90 bp GCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTaGAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCC +
Preference number: 1 (lower is better)
Translates to: APASRQEDGYRSENE*NGQLTWAGPRSRVA
Trigger: GGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 90 bp TGCGGCAAACCAGGTGACCGTACCTGGCACAAGGAGGGCAAATTATaGTGTCACCCTGAAGTGCTGACTGGTGGTGGTTGCCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: CGKPGDRTWHKEGKL*CHPEVLTGGGCPSF
Trigger: GAAGCTGGGGCAACCACCACCAGTCAGCACTTCAGGGTGACAGCATAATTTGCCCTCCTTGTGCCAGGTACGGTCACCTGGTTTGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp TTTCTTCCTTGTCAGGCCCTGCTCTGGTGTACCTCCCATCTCCCCTaGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGTC +
Preference number: 1 (lower is better)
Translates to: FLPCQALLWCTSHLP*LLAGTKSITAFPSV
Trigger: GACAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCAGAGCAGGGCCTGACAAGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp TGCTTCTTCCAACAAGACCCACAGCCTGGGCACCAGCAGCTTCCGTaGACACAGGATCTAGCTGGGACCACCTGGGAAACTGGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: CFFQQDPQPGHQQLP*TQDLAGTTWETGKN
Trigger: GTTCTTCCCAGTTTCCCAGGTGGTCCCAGCTAGATCCTGTGTCCACGGAAGCTGCTGGTGCCCAGGCTGTGGGTCTTGTTGGAAGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp CTCTCTCCCCAGCTAGGGGAGGAGAAAGGACCGGAATTCACCTCTTaGTGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCC +
Preference number: 1 (lower is better)
Translates to: LSPQLGEEKGPEFTS*WPHSWVACLPRNGP
Trigger: GGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGTCCTTTCTCCTCCCCTAGCTGGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp GGGTCAGGCTCTCTCCCGTCCCTCCTGGAAGGACAGGTGCTTTCCTaGGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGT +
Preference number: 1 (lower is better)
Translates to: GSGSLPSLLEGQVLS*GWGSPSFGVYQTRC
Trigger: ACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAGAGCCTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp CCAGTCCAGCAGCACAATGCTAGTGCCTCCTTTGAGTCTTGTCACTaGAGCCATTCTGCCCCAGCCCACAGGTCCCTTGGAGGTTCATGC +
Preference number: 1 (lower is better)
Translates to: PVQQHNASASFESCH*SHSAPAHRSLGGSC
Trigger: GCATGAACCTCCAAGGGACCTGTGGGCTGGGGCAGAATGGCTTCAGTGACAAGACTCAAAGGAGGCACTAGCATTGTGCTGCTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTaGGTTCAGGGGTCACTCTCCCAAGAAGGTAGCCATGGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: RFMPSVDTELECGLG*VQGSLSQEGSHGPS
Trigger: GCTGGGGCCATGGCTACCTTCTTGGGAGAGTGACCCCTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp TCCTCTTCCCAGCCCAGGCCCAAATCTCAGCTCCACCTCTCATTATaGAGACCACACCCACCATCAGCTGGGGCCTGGAACACATTTGTC +
Preference number: 1 (lower is better)
Translates to: SSSQPRPKSQLHLSL*RPHPPSAGAWNTFV
Trigger: GACAAATGTGTTCCAGGCCCCAGCTGATGGTGGGTGTGGTCTTCATAATGAGAGGTGGAGCTGAGATTTGGGCCTGGGCTGGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 90 bp AGAGTTGAAGCAAGGGCGGTCATCCCTGAAGACATGAATGCCTTCTaGCTTGGAACACCAGCTCCTGGTCCTCTTTTCTGCAGTGGGGCC +
Preference number: 1 (lower is better)
Translates to: RVEARAVIPEDMNAF*LGTPAPGPLFCSGA
Trigger: GGCCCCACTGCAGAAAAGAGGACCAGGAGCTGGTGTTCCAAGGCAGAAGGCATTCATGTCTTCAGGGATGACCGCCCTTGCTTCAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 90 bp AATACACTGGGTCAGGCTCTCTCCCGTCCCTCCTGGAAGGACAGGTaGTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAA +
Preference number: 1 (lower is better)
Translates to: NTLGQALSRPSWKDR*FPEAGGLLHSEFIK
Trigger: TTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAGAGCCTGACCCAGTGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp CGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTTGCTaGGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAGCT +
Preference number: 1 (lower is better)
Translates to: RGAGWPLDHIVSSLC*DLRVSLADLHQKIA
Trigger: AGCTATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp GAAGACGGCTACAGATCTGAGAATGAGTGCAATGGTCAGTTAACATaGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTC +
Preference number: 1 (lower is better)
Translates to: EDGYRSENECNGQLT*AGPRSRVALGSHSF
Trigger: GAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCACTCATTCTCAGATCTGTAGCCGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp AAACTGCAAGGACGATTGTGCCCTCAGGGTGTCTTTCCAAGGTCTTaGGCTACCTTGTTCCACCCTGATGGCCCTGACCACATTCTTCCT +
Preference number: 1 (lower is better)
Translates to: KLQGRLCPQGVFPRS*ATLFHPDGPDHILP
Trigger: AGGAAGAATGTGGTCAGGGCCATCAGGGTGGAACAAGGTAGCTCAAGACCTTGGAAAGACACCCTGAGGGCACAATCGTCCTTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp GCAGCTTCCGTGGACACAGGATCTAGCTGGGACCACCTGGGAAACTaGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: AASVDTGSSWDHLGN*EELSLLSSHLSPGQ
Trigger: CTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGTTTCCCAGGTGGTCCCAGCTAGATCCTGTGTCCACGGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp GATGCTTCACTAGACTCTTCTAGTTCCTCCGCTTGGTCATCCACCTaGAAATGTGAATGCGGCAAACCAGGTGACCGTACCTGGCACAAG +
Preference number: 1 (lower is better)
Translates to: DASLDSSSSSAWSST*KCECGKPGDRTWHK
Trigger: CTTGTGCCAGGTACGGTCACCTGGTTTGCCGCATTCACATTTTCAGGTGGATGACCAAGCGGAGGAACTAGAAGAGTCTAGTGAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp CTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGGTATGCAATaGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: LIPGITPLVSTTGMQ*ALECFSRVVLVPPG
Trigger: CCCAGGAGGAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp CTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTaGAAGGAGATCCAGTCTCTGGATGCTTCACTAGACTCTTCTAGT +
Preference number: 1 (lower is better)
Translates to: LRLGVSFIRSLSNQM*KEIQSLDASLDSSS
Trigger: ACTAGAAGAGTCTAGTGAAGCATCCAGAGACTGGATCTCCTTTCACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 90 bp AGCCATTGTGAGCGCTCGCCAGGAAAAGATAGGACGACTGATGAATaGTTTTGCCAATGGAACCATAAGAGAGGTGGATCAGATGGACTG +
Preference number: 1 (lower is better)
Translates to: SHCERSPGKDRTTDE*FCQWNHKRGGSDGL
Trigger: CAGTCCATCTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTATCTTTTCCTGGCGAGCGCTCACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp GGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCCTCCTGGGCTTaGAAACTTTCCAGAACTTTACCTAGCTTAGTTGTTGCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: GFGMFFQSGPCSSWA*KLSRTLPSLVVALS
Trigger: GGACAAGGCAACAACTAAGCTAGGTAAAGTTCTGGAAAGTTTCCAAGCCCAGGAGGAACAAGGACCACTCTGGAAAAACATTCCAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 90 bp GCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCCTCCTaGGCTTGGAAACTTTCCAGAACTTTACCTAGCTTAGTTGTTGCC +
Preference number: 1 (lower is better)
Translates to: AMGFGMFFQSGPCSS*AWKLSRTLPSLVVA
Trigger: GGCAACAACTAAGCTAGGTAAAGTTCTGGAAAGTTTCCAAGCCCAGGAGGAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCCCCCAGAGGGACGGCTaGCAGTGGAGCCCGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIPQRDG*QWSPVA
Trigger: GGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGG...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCTCCTGGAAGGACAGGTaGTTTCCTGAGGCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: PGARAQTRDGGLRWSSASSWKDR*FPEAGG
Trigger: ACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGA...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCGTGGGGCCCAGTGGCTaGTGTTTAGGAAGGGGCACT +
Preference number: 2 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAVGPSG*CLGRGT
Trigger: AGTGCCCCTTCCTAAACATCAGCCACTGGGCCCCAC...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCGGAGGTGGGGCCCAGTaGCTGATGTTTAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAGGGAQ*LMFRKG
Trigger: CCCCTTCCTAAACATCAGCCACTGGGCCCCACCTCC...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGACCTGTGTGTCCCGGTaGTTCTGGGAACTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PISPGFWLGPRASLPSHLTCVSR*FWELWR
Trigger: CCTCCACAGTTCCCAGAAGCACCGGGACACACAGGT...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCCCTGGGTTGCCTGTTTaGCTAGAAATGGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIPGLPV*LEMAPR
Trigger: TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGG...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCAAGGAGGGCAAATTATaGTGTCACCCTGAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: PGARAQTRDGGLRWSSASKEGKL*CHPEVL
Trigger: CAGCACTTCAGGGTGACAGCATAATTTGCCCTCCTT...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 90 bp AGGAGAAAGGACCGGAATTCACCTCTTGATGGCCACATTCCTGGGTaGCCTGTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: RRKDRNSPLDGHIPG*PVCLEMAPRGTAGS
Trigger: ACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGTCCTTTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTAAGGGCGGTCATCCCTaGAGACATGAATGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPKGGHP*RHECLL
Trigger: CAGAAGGCATTCATGTCTTCAGGGATGACCGCCCTT...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGCCCCCTAAGCTTTGGTaGGGTCCCGGTGTATCCCCC +
Preference number: 2 (lower is better)
Translates to: RFMPSVDTELECGLGWVQPPKLW*GPGVSP
Trigger: GGGGGATACACCGGGACCCCACCAAAGCTTAGGGGG...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTCTAGCGAGGGGCTGCTaGGGTCAACTGGCTCCTAGA +
Preference number: 2 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSLARGC*GQLAPR
Trigger: TCTAGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAG...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGATCTGGCCAGGGCCCCTaGGGCTCCCTCGGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGSGQGP*GSLGSF
Trigger: GAAGGAGCCGAGGGAGCCCCAGGGGCCCTGGCCAGA...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 90 bp GGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTaGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: GPRSRVALGSHSFFP*LRPPCILSRPPPED
Trigger: ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATGCTCCTTCCTGGCCCTaGCCAAGTCACCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDAPSWP*PSHLPP
Trigger: TGGAGGCAGGTGACTTGGGCAGGGCCAGGAAGGAGC...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGGTCACCCTGAAGTGCTaGCTGGTGGTGGTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVVTLKC*LVVVAP
Trigger: TGGGGCAACCACCACCAGTCAGCACTTCAGGGTGAC...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGCGGCAAACCAGGTaGCCGTACCTGGCACAAGGA +
Preference number: 2 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQMRQTR*PYLAQG
Trigger: TCCTTGTGCCAGGTACGGTCACCTGGTTTGCCGCAT...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGCCCCCTAAGCTTTaGTGGGGTCCCGGTGTATCC +
Preference number: 2 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQMPPKL*WGPGVS
Trigger: GGATACACCGGGACCCCACCAAAGCTTAGGGGGCAT...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGCCCCCAGCTTTGCATaGGGAGCTCAGTTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTAPSFA*GAQLRD
Trigger: GTCCCTCAACTGAGCTCCTCATGCAAAGCTGGGGGC...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTATCAAACCAGATGTaGAAGGAGATCCAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: WCTSHLPWLLAGTKSITALSNQM*KEIQSL
Trigger: CAGAGACTGGATCTCCTTTCACATCTGGTTTGATAA...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAACCCTCGGCTCCTTCCTaGCCCTGCCCAAGTCACCTG +
Preference number: 2 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQPSAPS*PCPSHL
Trigger: CAGGTGACTTGGGCAGGGCCAGGAAGGAGCCGAGGG...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATTATGCTGTCACCCTaGAGTGCTGACTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQIMLSP*SADWWW
Trigger: CCACCACCAGTCAGCACTTCAGGGTGACAGCATAAT...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCCAACTAGCGAGGGGCTaGTGGGGTCAACTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFQLARG*WGQLAP
Trigger: AGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAGTTG...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 90 bp TTCAAGACAAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTaGTCAGGCCCTGCTCTGGTGTACCTCCCATCTCCCCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: FKTRTLRSKASLFSS*SGPALVYLPSPLAS
Trigger: AGAAGCCAGGGGAGATGGGAGGTACACCAGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTTGTCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 90 bp CCTGGAATCACTCCCCTAGTCTCTACCACAGGTATGCAATGGGCTTaGGAATGTTTTTCCAGAGTGGTCCTTGTTCCTCCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: PGITPLVSTTGMQWA*ECFSRVVLVPPGLG
Trigger: TCCAAGCCCAGGAGGAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAGAGACTAGGGGAGTGATTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGACATGAATGCCTTCTaGCTTGGAACACCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: MWALVYFLASKSLLGWPQDMNAF*LGTPAP
Trigger: AGGAGCTGGTGTTCCAAGGCAGAAGGCATTCATGTC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTTGGGAACTGTGGAGGTaGGGCCCAGTGGCTGATGTT +
Preference number: 2 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFWELWR*GPVADV
Trigger: AACATCAGCCACTGGGCCCCACCTCCACAGTTCCCA...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCGGCCGAGGAGCAGGGTaGCCCTTGGATCACATAGTT +
Preference number: 2 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFGRGAG*PLDHIV
Trigger: AACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCC...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAAGTGCTGACTGGTGGTaGTTGCCCCAGCTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGSADWW*LPQLPD
Trigger: GTCTGGAAGCTGGGGCAACCACCACCAGTCAGCACT...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCCACCAGCAGCTTCCGTaGACACAGGATCTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFHQQLP*TQDLAG
Trigger: CCCAGCTAGATCCTGTGTCCACGGAAGCTGCTGGTG...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTATCTCCCCTGGCTTCTaGCTGGGACCAAGAGCATCA +
Preference number: 2 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFISPGF*LGPRAS
Trigger: TGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGAT...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGACCAAGAATTCAGAGTTaGAGCAAGGGCGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGPRIQS*SKGGHP
Trigger: GGGATGACCGCCCTTGCTTCAACTCTGAATTCTTGG...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCTCTCCCGTCCCTCCTaGAAGGACAGGTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: IGRLMNDFANGTIREVDQLSRPS*KDRCFP
Trigger: AGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGTTTCTTCCCTTTGCTaGGACCTCCGTGTATCCTTA +
Preference number: 2 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTVSSLC*DLRVSL
Trigger: TAAGGATACACGGAGGTCTCAGCAAAGGGAAGAAAC...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCCGGAATTCACCTCTTaGTGGCCACATTCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: IGRLMNDFANGTIREVDQPEFTS*WPHSWV
Trigger: AACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR TCA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGTGGCTCCTAGAATTGTaGTTGCAAAAAGACTATGCC +
Preference number: 2 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVWLLEL*LQKDYA
Trigger: GGCATAGTCTTTTTGCAATCACAATTCTAGGAGCCA...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCCATCAGCTGGGGCCTaGAACACATTTGTCCGTCTT +
Preference number: 2 (lower is better)
Translates to: IGRLMNDFANGTIREVDQPSAGA*NTFVRL
Trigger: AAGACGGACAAATGTGTTCCAGGCCCCAGCTGATGG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGATAGCTTGGTACAATaGCTGCTTCTCTTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGDSLVQ*LLLFLP
Trigger: TGGAAGAAAGAGAAGCAGCCATTGTACCAAGCTATC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCAGATCTGAGAATGAGTaGAATGGTCAGTTAACATGG +
Preference number: 2 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFRSENE*NGQLTW
Trigger: CCATGTTAACTGACCATTGCACTCATTCTCAGATCT...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp GGTCAGGCTCTCTCCCGTCCCTCCTGGAAGGACAGGTaGTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAG +
Preference number: 3 (lower is better)
Translates to: GQALSRPSWKDR*FPEAGGLLHSE
Trigger: CTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAGAGCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp CCCTGCTCTGGTGTACCTCCCATCTCCCCTGGCTTCTaGCTGGGACCAAGAGCATCACTGCCTTCCCATCTG +
Preference number: 3 (lower is better)
Translates to: PCSGVPPISPGF*LGPRASLPSHL
Trigger: CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCAGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp TGTCAGGCCCTGCTCTGGTGTACCTCCCATCTCCCCTaGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTC +
Preference number: 3 (lower is better)
Translates to: CQALLWCTSHLP*LLAGTKSITAF
Trigger: GAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCAGAGCAGGGCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp GTGCTTCTGGGAACTGTGGAGGTGGGGCCCAGTGGCTaGTGTTTAGGAAGGGGCACTGATGGCTCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: VLLGTVEVGPSG*CLGRGTDGSES
Trigger: GCTCTCTGAGCCATCAGTGCCCCTTCCTAAACATCAGCCACTGGGCCCCACCTCCACAGTTCCCAGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp GGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTaGTCCAGTGCAAGCTCTCCTCTTATGTCCATGCCA +
Preference number: 3 (lower is better)
Translates to: GARAQTRDGGLR*SSASSPLMSMP
Trigger: TGGCATGGACATAAGAGGAGAGCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCCCCAAGAATTCAGAGTaGAAGCAAGGGCGGTCATCC +
Preference number: 3 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAPKNSE*KQGRSS
Trigger: GGATGACCGCCCTTGCTTCAACTCTGAATTCTTGGG...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp TCACCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTaGCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: SPLDGHIPGLPV*LEMAPRGTAGS
Trigger: ACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp GGACGATTGTGCCCTCAGGGTGTCTTTCCAAGGTCTTaGGCTACCTTGTTCCACCCTGATGGCCCTGACCAC +
Preference number: 3 (lower is better)
Translates to: GRLCPQGVFPRS*ATLFHPDGPDH
Trigger: GTGGTCAGGGCCATCAGGGTGGAACAAGGTAGCTCAAGACCTTGGAAAGACACCCTGAGGGCACAATCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp CCAGGTGACCGTACCTGGCACAAGGAGGGCAAATTATaGTGTCACCCTGAAGTGCTGACTGGTGGTGGTTGC +
Preference number: 3 (lower is better)
Translates to: PGDRTWHKEGKL*CHPEVLTGGGC
Trigger: GCAACCACCACCAGTCAGCACTTCAGGGTGACAGCATAATTTGCCCTCCTTGTGCCAGGTACGGTCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp AGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTaGAAGCTCTCCTCTTATGTCCATGCCAACCTCCTT +
Preference number: 3 (lower is better)
Translates to: SPDQGWWSSVVQ*KLSSYVHANLL
Trigger: AAGGAGGTTGGCATGGACATAAGAGGAGAGCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp AGACATGAATGCCTTCTGCCTTGGAACACCAGCTCCTaGTCCTCTTTTCTGCAGTGGGGCCTCTGCAGCCCA +
Preference number: 3 (lower is better)
Translates to: RHECLLPWNTSS*SSFLQWGLCSP
Trigger: TGGGCTGCAGAGGCCCCACTGCAGAAAAGAGGACCAGGAGCTGGTGTTCCAAGGCAGAAGGCATTCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp TACCTGGCACAAGGAGGGCAAATTATGCTGTCACCCTaGAGTGCTGACTGGTGGTGGTTGCCCCAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: YLAQGGQIMLSP*SADWWWLPQLP
Trigger: TGGAAGCTGGGGCAACCACCACCAGTCAGCACTTCAGGGTGACAGCATAATTTGCCCTCCTTGTGCCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp TCTCTCCCGTCCCTCCTGGAAGGACAGGTGCTTTCCTaGGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAA +
Preference number: 3 (lower is better)
Translates to: SLPSLLEGQVLS*GWGSPSFGVYQ
Trigger: TTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp CAGCACAATGCTAGTGCCTCCTTTGAGTCTTGTCACTaGAGCCATTCTGCCCCAGCCCACAGGTCCCTTGGA +
Preference number: 3 (lower is better)
Translates to: QHNASASFESCH*SHSAPAHRSLG
Trigger: TCCAAGGGACCTGTGGGCTGGGGCAGAATGGCTTCAGTGACAAGACTCAAAGGAGGCACTAGCATTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp GCAAGGGCGGTCATCCCTGAAGACATGAATGCCTTCTaGCTTGGAACACCAGCTCCTGGTCCTCTTTTCTGC +
Preference number: 3 (lower is better)
Translates to: ARAVIPEDMNAF*LGTPAPGPLFC
Trigger: GCAGAAAAGAGGACCAGGAGCTGGTGTTCCAAGGCAGAAGGCATTCATGTCTTCAGGGATGACCGCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp CATTCTGCCCCAGCCCACAGGTCCCTTGGAGGTTCATaGCTAGTGTTGACACTGAGCTTGAATGTGGCCTTG +
Preference number: 3 (lower is better)
Translates to: HSAPAHRSLGGS*LVLTLSLNVAL
Trigger: CAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCTCCAAGGGACCTGTGGGCTGGGGCAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp GCCAACCCCTCTCCAGAGCAACTAGCGAGGGGCTGCTaGGGTCAACTGGCTCCTAGAATTGTGATTGCAAAA +
Preference number: 3 (lower is better)
Translates to: ANPSPEQLARGC*GQLAPRIVIAK
Trigger: TTTTGCAATCACAATTCTAGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAGTTGCTCTGGAGAGGGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp CAGCTAGGGGAGGAGAAAGGACCGGAATTCACCTCTTaGTGGCCACATTCCTGGGTTGCCTGTTTGCCTAGA +
Preference number: 3 (lower is better)
Translates to: QLGEEKGPEFTS*WPHSWVACLPR
Trigger: TCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGTCCTTTCTCCTCCCCTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp GGGTGGCCCTTGGATCACATAGTTTCTTCCCTTTGCTaGGACCTCCGTGTATCCTTAGCAGACCTCCACCAG +
Preference number: 3 (lower is better)
Translates to: GWPLDHIVSSLC*DLRVSLADLHQ
Trigger: CTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAAACTATGTGATCCAAGGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR GCA 72 bp TCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTaGAATGGTCAGTTAACATGGGCAGGGCCGAGGAGC +
Preference number: 3 (lower is better)
Translates to: SRQEDGYRSENE*NGQLTWAGPRS
Trigger: GCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp TACAGATCTGAGAATGAGTGCAATGGTCAGTTAACATaGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCA +
Preference number: 3 (lower is better)
Translates to: YRSENECNGQLT*AGPRSRVALGS
Trigger: TGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCACTCATTCTCAGATCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp TCACTGAAGCCATTCTGCCCCAGCCCACAGGTCCCTTaGAGGTTCATGCCTAGTGTTGACACTGAGCTTGAA +
Preference number: 3 (lower is better)
Translates to: SLKPFCPSPQVP*RFMPSVDTELE
Trigger: TTCAAGCTCAGTGTCAACACTAGGCATGAACCTCCAAGGGACCTGTGGGCTGGGGCAGAATGGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGCTGACTGGTGGTGGTaGCCCCAGCTTCCAGACAGG +
Preference number: 3 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFADWWW*PQLPDR
Trigger: CCTGTCTGGAAGCTGGGGCAACCACCACCAGTCAGC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGGCCACATTCCTGGGTaGCCTGTTTGCCTAGAAATG +
Preference number: 3 (lower is better)
Translates to: RFMPSVDTELECGLGWVQGHIPG*PVCLEM
Trigger: CATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGACCGGAATTCACCTCTaGATGGCCACATTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQTGIHL*MATFLG
Trigger: ACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGT...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTTCCTGGGTTGCCTGTTaGCCTAGAAATGGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFSWVAC*PRNGPQ
Trigger: CTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGA...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGCCACCAGAAGATAGCTaGGTACAATGGCTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: RFMPSVDTELECGLGWVQPPEDS*VQWLLL
Trigger: GAGAAGCAGCCATTGTACCAAGCTATCTTCTGGTGG...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp CTAGACTCTTCTAGTTCCTCCGCTTGGTCATCCACCTaGAAATGTGAATGCGGCAAACCAGGTGACCGTACC +
Preference number: 3 (lower is better)
Translates to: LDSSSSSAWSST*KCECGKPGDRT
Trigger: GGTACGGTCACCTGGTTTGCCGCATTCACATTTTCAGGTGGATGACCAAGCGGAGGAACTAGAAGAGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGGGAGCAGGGTGGCCCTaGGATCACATAGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: IGRLMNDFANGTIREVDQGAGWP*DHIVSS
Trigger: GGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCC...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp GGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTaGAAGGAGATCCAGTCTCTGGATGCTTCACTAGAC +
Preference number: 3 (lower is better)
Translates to: GVSFIRSLSNQM*KEIQSLDASLD
Trigger: GTCTAGTGAAGCATCCAGAGACTGGATCTCCTTTCACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR TCA 72 bp GAGCGCTCGCCAGGAAAAGATAGGACGACTGATGAATaGTTTTGCCAATGGAACCATAAGAGAGGTGGATCA +
Preference number: 3 (lower is better)
Translates to: ERSPGKDRTTDE*FCQWNHKRGGS
Trigger: TGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTATCTTTTCCTGGCGAGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CCA 72 bp GGAATCACTCCCCTAGTCTCTACCACAGGTATGCAATaGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GITPLVSTTGMQ*ALECFSRVVLV
Trigger: AACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAGAGACTAGGGGAGTGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR-3UTR CAA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGGGTATGCAATGGGCTTaGGAATGTTTTTCCAGAGTG +
Preference number: 3 (lower is better)
Translates to: IGRLMNDFANGTIREVDQGMQWA*ECFSRV
Trigger: CACTCTGGAAAAACATTCCAAAGCCCATTGCATACC...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCCCCAGAGGGACGGCTaGCAGTGGAGCCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPPQRDG*QWSPVA
Trigger: GGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCGAGCAGGGCAGCGGCTaGCAGCACCACCTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPEQGSG*QHHLAG
Trigger: ACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCTGCTC...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCGCACCGTGGCCGTGTaGGCCAGGGCGAACGTGTCA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPRTVAV*ARANVS
Trigger: TGACACGTTCGCCCTGGCGCACACGGCCACGGTGCG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCAGGGACGGCTGGCAGTaGAGCCCGGTGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASRDGWQ*SPVAPS
Trigger: GCTGGGGGCCACCGGGCTCCACTGCCAGCCGTCCCT...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCCCGGCCCACCAGCGCTaGTCCTGCGCAGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASPAHQR*SCAEKR
Trigger: CCGCTTCTCTGCGCAGGAGCAGCGCTGGTGGGCCGG...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCGTACCAGAGCCGGGTaGTGGCGCTGCAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPRTRAG*WRCSGT
Trigger: TGTACCGCTGCAGCGCCAGCACCCGGCTCTGGTACG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCGCAGCGAGCCGCCGGTaGCGAAGATTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPAASRR*RRFPWH
Trigger: GTGCCAAGGAAATCTTCGTCACCGGCGGCTCGCTGC...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCGCTGCCGTCGGCTGCTaGAATGAGTCCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPAAVGC*NESSWG
Trigger: TCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGC...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCATGGGGCTCCCGGCTaGTTCTGCCTAAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPHGAPG*FCLSQA
Trigger: TGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGGCCGGGTGCTGGCGCTaGAGCGGTACACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLAGCWR*SGTRRC
Trigger: GCATCGCCGTGTACCGCTGCAGCGCCAGCACCCGGC...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGAGCAGAAGACGCGGCTaGAGGGCTGGTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLSRRRG*RAGARA
Trigger: GGCCCGGGCACCAGCCCTCCAGCCGCGTCTTCTGCT...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCCAGACCAGGGATGGTaGTCTTCGGTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPPDQGW*SSVVQC
Trigger: GCACTGGACCACCGAAGACCACCATCCCTGGTCTGG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTGGCCACGGCCCTGTCTaGGGGGAGGCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPGHGPV*GEAALS
Trigger: CGAAAGAGCCGCCTCCCCGCAGACAGGGCCGTGGCC...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCGCCACCGGCTGCACATaGGGCTCCCGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIATGCT*GSRLLL
Trigger: CAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGC...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCAAGGCGTCCGGTACGTaGCGCACTCGTACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASKASGT*RTRTRA
Trigger: GGCTCTGGTACGAGTGCGCCACGTACCGGACGCCTT...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCGAGGCAAATCGGGGGTaGGCAAGGTCAGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASEANRG*ARSGRW
Trigger: CCACCGTCCTGACCTTGCCCACCCCCGATTTGCCTC...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCTCTCCCGTCCCTCCTaGAAGGACAGGTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPLSRPS*KDRCFP
Trigger: AGGAAAGCACCTGTCCTTCCAGGAGGGACGGGAGAG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCCGTACACCTTGCCCTTaGGCCGGGGCTCAACCCCCT +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITARTPCP*AGAQPP
Trigger: AGGGGGTTGAGCCCCGGCTCAAGGGCAAGGTGTACG...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCAACCTCAGTCAGGGCTaGTGTCCTGGGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASNLSQG*CPGSQP
Trigger: AGGCTGGCTCCCAGGACAGCAGCCCTGACTGAGGTT...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCGGATATGGAAGAAATTaGTCCCGGCCACCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPGYGRN*SRPPAA
Trigger: TGCAGCCGGTGGCCGGGACCAATTTCTTCCATATCC...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCGTCCCACGCAGTAGATaGGGTTGTCCACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAVPRSR*GCPPRR
Trigger: GCGCCGTGGTGGACAACCTCATCTACTGCGTGGGAC...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCCACCAGCGCTGCTCCTaGGCAGAGAAGCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIHQRCS*AEKRNS
Trigger: GCTGTTCCGCTTCTCTGCGCAGGAGCAGCGCTGGTG...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCACTGGCAGAGCCTGGTaGCAGAGCCCAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITATGRAW*QSPDQG
Trigger: TCCCTGGTCTGGGCTCTGGCACCAGGCTCTGCCAGT...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGCTGTGGCCTCTGAGCTaGCACTGGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLLWPLS*HWQSLV
Trigger: CACCAGGCTCTGCCAGTGGCAGCTCAGAGGCCACAG...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTACCCCACCGCTGGGCTaGGGCAGGCCTCGACTTGTA +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPTPPLG*GRPRLV
Trigger: TACAAGTCGAGGCCTGCCCCAGCCCAGCGGTGGGGT...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTCCTTGGCTTCTGCCTaGCCATTCCCACCCCACCGC +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITASLASA*PFPPHR
Trigger: GCGGTGGGGTGGGAATGGCCAGGCAGAAGCCAAGGA...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCCTGAGCCTTTTCTCTaGGGCTTCCTGTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPPEPFL*GFLSVE
Trigger: TTCCACAGACAGGAAGCCCCAGAGAAAAGGCTCAGG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTCAGGGACCCTGGCGGTaGCCTAGGGGATGGAACCTC +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPQGPWR*PRGWNL
Trigger: GAGGTTCCATCCCCTAGGCCACCGCCAGGGTCCCTG...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGTTTGTGTCACCGGCTTaGCCTCCCGAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLFVSPA*PPEAAP
Trigger: AGGGGCTGCCTCGGGAGGCCAAGCCGGTGACACAAA...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCAGTGCTGACTGGTGGTaGTTGCCCCAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASSADWW*LPQLPD
Trigger: GTCTGGAAGCTGGGGCAACCACCACCAGTCAGCACT...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCCATCAGCTGGGGCCTaGAACACATTTGTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPPSAGA*NTFVRL
Trigger: AAGACGGACAAATGTGTTCCAGGCCCCAGCTGATGG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCGTGGGGCCCAGTGGCTaGTGTTTAGGAAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIVGPSG*CLGRGT
Trigger: AGTGCCCCTTCCTAAACATCAGCCACTGGGCCCCAC...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTCCCCGGAGCCGGCGCTaGAGGATCAGCTCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSPRSRR*RISSRS
Trigger: AGAGCGCGAGCTGATCCTGCAGCGCCGGCTCCGGGG...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGGCAGGAGGGTGCCCTaGGGGGCCGGGAAACTCCGC +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQGRRVP*GAGKLR
Trigger: GCGGAGTTTCCCGGCCCCGCAGGGCACCCTCCTGCC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTGAGCCGGAAGCCATCTaGCTGCAGCTGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPEPEAI*LQLQLW
Trigger: CCAGAGCTGCAGCTGCAGCCAGATGGCTTCCGGCTC...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTTCTGGCCAGGGCCCCTaGGGCTCCCTCGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSSGQGP*GSLGSF
Trigger: GAAGGAGCCGAGGGAGCCCCAGGGGCCCTGGCCAGA...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCGCCAATGTCACCCTGTaGCCTCTGAGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIANVTL*PLSCHW
Trigger: CCAGTGGCAGCTCAGAGGCCACAGGGTGACATTGGC...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCCATGAGGAGCTCAGTTaGGGGACTGCTAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAHEELS*GTARPW
Trigger: CCAGGGTCTAGCAGTCCCTCAACTGAGCTCCTCATG...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGCTCCTCTGGGGAACATaGTTCTCCAGCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLLLWGT*FSSQPG
Trigger: CCCAGGTTGGCTGGAGAAGCATGTTCCCCAGAGGAG...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGTGGTGCCCGGGCCCCTaGCAGCCGGACACCACGAAG +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQWCPGP*QPDTTK
Trigger: CTTCGTGGTGTCCGGCTGCCAGGGGCCCGGGCACCA...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTACCAGAGCCGGGTGCTaGCGCTGCAGCGGTACACGG +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSTRAGC*RCSGTR
Trigger: CCGTGTACCGCTGCAGCGCCAGCACCCGGCTCTGGT...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTGCTTCTGGGAACTGTaGAGGTGGGGCCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPCFWEL*RWGPVA
Trigger: AGCCACTGGGCCCCACCTCCACAGTTCCCAGAAGCA...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTGTCAGGCCCTGCTCTaGTGTACCTCCCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPCQALL*CTSHLP
Trigger: GGGGAGATGGGAGGTACACCAGAGCAGGGCCTGACA...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATCCTTGGCACGCACCGTaGCCGTGTGCGCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDPWHAP*PCAPGR
Trigger: TCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGG...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGCCCCCTAAGCTTTGGTaGGGTCCCGGTGTATCCCCC +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLPPKLW*GPGVSP
Trigger: GGGGGATACACCGGGACCCCACCAAAGCTTAGGGGG...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCCACCAGAAGATAGCTTaGTACAATGGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPHQKIA*YNGCFS
Trigger: AGAGAAGCAGCCATTGTACCAAGCTATCTTCTGGTG...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCTGTCTCCCTCAGAGGTaGAACAAGGGCTGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASCLPQR*NKGCGN
Trigger: ATTACCACAGCCCTTGTTCCACCTCTGAGGGAGACA...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCCCGGAATTCACCTCTTaGTGGCCACATTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWIPEFTS*WPHSWV
Trigger: AACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGG...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCGCTTGGTCATCCACCTaGAAATGTGAATGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: PGARAQTRDGGLRWSSASAWSST*KCECGK
Trigger: TTTGCCGCATTCACATTTTCAGGTGGATGACCAAGC...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGTCACCCTGTGGCCTCTaGGCTGCCACTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: MWALVYFLASKSLLGWPQSPCGL*AATGRA
Trigger: GGCTCTGCCAGTGGCAGCTCAGAGGCCACAGGGTGA...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTCAGCAAGGAGGCACCTaGTCAGAGTCCGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSQQGGT*SESEPC
Trigger: GCAGGGCTCGGACTCTGAGCAGGTGCCTCCTTGCTG...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCGCCTTCTGTATGAAATaGTCCTCCATTCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAAFCMK*SSIRTR
Trigger: CCGCGTCCGAATGGAGGAGCATTTCATACAGAAGGC...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGTCCCGGCCACCGGCTaGACATGGGGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGVPATG*TWGSRL
Trigger: CAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGAC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGGATCAGCTCGCGCTCTaGCCCGCTCAGGCACCCGTA +
Preference number: 4 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQDQLAL*PAQAPV
Trigger: TACGGGTGCCTGAGCGGGGCAGAGCGCGAGCTGATC...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCGCCACCAGCCGGCAGTaGGGCCGGGCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFATSRQ*GRAWFS
Trigger: GCTGAACCAGGCCCGGCCGCACTGCCGGCTGGTGGC...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTCTAGGAAGCAGAGGGTaGTCCGGCGTCCCACGCAGT +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSLGSRG*SGVPRS
Trigger: ACTGCGTGGGACGCCGGAGCACCCTCTGCTTCCTAG...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGAGCTGTTCTGGTTTCCTaGCTGGGGCAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRAVLVS*LGQQGG
Trigger: GCCTCCTTGCTGCCCCAGCCAGGAAACCAGAACAGC...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTTTACTGTCCTGCCATaGAGAAGGCTCACCACCGGC +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPFTVLP*RRLTTG
Trigger: GCCGGTGGTGAGCCTTCTCCATGGCAGGACAGTAAA...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGAGACACTCTCCGCCGATaGCATACAGGTGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRDTLRR*HTGARP
Trigger: TGGACGGGCACCTGTATGCCATCGGCGGAGAGTGTC...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGCCTTGGGCACAAACCTaGGTGAGACAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLPWAQT*VRQSLL
Trigger: TAGCAGACTCTGTCTCACCCAGGTTTGTGCCCAAGG...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGGTAGAGAAAGCCGTTaGCCGCCACCATCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: MWALVYFLASKSLLGWPQGRESR*PPPSRP
Trigger: CGGCCGAGATGGTGGCGGTCAACGGCTTTCTCTACC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGATGCCCAGGCTGCGGTTaGGGTCAAAGCGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRCPGCG*GQSGRE
Trigger: TTCTCTACCGCTTTGACCTCAACCGCAGCCTGGGCA...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGCTCCACCTCTCATTATaGAGACCACACCCACCATCA +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLLHLSL*RPHPPS
Trigger: TGATGGTGGGTGTGGTCTTCATAATGAGAGGTGGAG...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGTTCCTCCTTGGCTTCTaGCTGGCCATTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLFLLGF*LAIPTP
Trigger: TGGGGTGGGAATGGCCAGGCAGAAGCCAAGGAGGAA...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTTCAGAGTCCGAGCCCTaGCCGCCCCGCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSSESEP*PPRSSP
Trigger: AGGTGAGGAGCGGGGCGGGCAGGGCTCGGACTCTGA...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAACGGTGGGCAGGAGGGTaGCCTGCGGGGCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQRWAGG*PAGPGN
Trigger: GTTTCCCGGCCCCGCAGGGCACCCTCCTGCCCACCG...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGAGGTATAGGAGGAGTTaGGGGCGCCCTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLRYRRS*GRPPAD
Trigger: ATCAGCAGGAGGGCGCCCCCAACTCCTCCTATACCT...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGCGCCGGAGTCTTCCTTaGGGCACACGTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQRRSLP*GTRQPP
Trigger: TGGTGGCTGACGTGTGCCCCAAGGAAGACTCCGGCG...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAGTGCGGCCGGGCCTaGTTCAGCGGGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFQCGRA*FSGHTS
Trigger: CGAGGTGTGCCCGCTGAACCAGGCCCGGCCGCACTG...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCGAGAGGTGGATCAGATaGACTGTGTACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAERWIR*TVYSSS
Trigger: GGAAGAGGAGTACACAGTCCATCTGATCCACCTCTC...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 72 bp GACCGGAATTCACCTCTTGATGGCCACATTCCTGGGTaGCCTGTTTGCCTAGAAATGGCCCCCAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: DRNSPLDGHIPG*PVCLEMAPRGT
Trigger: CGTCCCTCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGCGGACCTGTGGGGCTaGAGCAGGGGTGAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGADLWG*SRGERD
Trigger: ATCCCGCTCACCCCTGCTTCAGCCCCACAGGTCCGC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGCCCCCAGCTTTGCATaGGGAGCTCAGTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: MWALVYFLASKSLLGWPQAPSFA*GAQLRD
Trigger: GTCCCTCAACTGAGCTCCTCATGCAAAGCTGGGGGC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGGACAGGTGCTTTCCTaGGGCTGGGGGTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQGQVLS*GWGSPS
Trigger: TGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGTCC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGAGCTCTTCGGTTCGCTaGCCAAGCGGGGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQSSSVR*PSGGNG
Trigger: CCCATTTCCCCCGCTTGGGCAGCGAACCGAAGAGCT...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGCTCCCGGCTGCTTCTaGCTAAGCCAGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFAPGCF*LSQAGR
Trigger: GCGCCCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGAGGGCCTCCAGGTTCTaGCTCTTGGCCAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQRASRF*LLAKVS
Trigger: GCTGACCTTGGCCAAGAGGCAGAACCTGGAGGCCCT...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGCCTGGGTTGCCTGTTTaGCTAGAAATGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLPGLPV*LEMAPR
Trigger: TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGG...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGCCTGGTCCTCTTTTCTaGAGTGGGGCCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQPGPLF*SGASAA
Trigger: GGCTGCAGAGGCCCCACTGCAGAAAAGAGGACCAGG...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTCTTCGGTGGTCCAGTaGAAGCTCTCCTCTTATGTC +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPSSVVQ*KLSSYV
Trigger: GACATAAGAGGAGAGCTTGCACTGGACCACCGAAGA...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGCTCCTCCGACGTCTTaGCCCCCTCAGGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGAPPTS*PPQEHP
Trigger: GGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGGGACTGCTAGACCCTaGTCTGAGGCAAATCGGGGG +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQGTARP*SEANRG
Trigger: CCCCCGATTTGCCTCAGACCAGGGTCTAGCAGTCCC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGGAGGTGGGGCCCAGTaGCTGATGTTTAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: MWALVYFLASKSLLGWPQGGGAQ*LMFRKG
Trigger: CCCCTTCCTAAACATCAGCCACTGGGCCCCACCTCC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGGCTGTGGTAATACACTaGGTCAGGCTCTCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLAVVIH*VRLSPV
Trigger: GACGGGAGAGAGCCTGACCCAGTGTATTACCACAGC...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAGTGGGGTGGGGGTGTaGCCAATGTCACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDSGVGV*PMSPCG
Trigger: GCCACAGGGTGACATTGGCCACACCCCCACCCCACT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGGGGCGCCCTCCTGCTaGTGCAGGGTCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGGAPSC*CRVRST
Trigger: TGTTGACCTGACCCTGCATCAGCAGGAGGGCGCCCC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGGGCTCTCCTTCCGGCTaGAGCCTCGGGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQGSPSG*SLGWRA
Trigger: GGCCCTCCACCCGAGGCTTCAGCCGGAAGGAGAGCC...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGACCAAGAATTCAGAGTTaGAGCAAGGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRPRIQS*SKGGHP
Trigger: GGGATGACCGCCCTTGCTTCAACTCTGAATTCTTGG...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACACTTCAGCCCGCTTGCTaGTCCTCCGACGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTLQPAC*SSDVLA
Trigger: GGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAG...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGTCACTGAAGCCATTCTaGCCCAGCCCACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQSLKPF*PSPQVP
Trigger: AGGGACCTGTGGGCTGGGGCAGAATGGCTTCAGTGA...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGAGTGTCATCTTAAACTaGAAGGACGATTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLSVILN*KDDCAL
Trigger: GAGGGCACAATCGTCCTTGCAGTTTAAGATGACACT...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAGGGCGAACGTGTCACTaGGGAGCGGCGGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGGRTCH*GAAGQS
Trigger: ACTTTGCCCCGCCGCTCCCCAGTGACACGTTCGCCC...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGTGTCCCGGTGCTTCTaGGAACTGTGGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTVSRCF*ELWRWG
Trigger: GCCCCACCTCCACAGTTCCCAGAAGCACCGGGACAC...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCAGGAGAAAAGTAATGTaGGCTTTGGTATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPRRKVM*ALVYFL
Trigger: GAGAAAATATACCAAAGCCCACATTACTTTTCTCCT...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTAATGGTCAGTTAACATaGGCAGGGCCGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSNGQLT*AGPRSR
Trigger: CCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATT...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGCCAGGTGACCGTACCTaGCACAAGGAGGGCAAATTA +
Preference number: 4 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLPGDRT*HKEGKL
Trigger: TAATTTGCCCTCCTTGTGCCAGGTACGGTCACCTGG...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATCCCCTGGCTTCTGGCTaGGACCAAGAGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDPLASG*DQEHHC
Trigger: GCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGG...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAGCCCAGACCAGGGATaGTGGTCTTCGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDSPDQG*WSSVVQ
Trigger: CTGGACCACCGAAGACCACCATCCCTGGTCTGGGCT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTCCTCCGCCTTCTGTATaGAATGCTCCTCCATTCGGA +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSPPPSV*NAPPFG
Trigger: TCCGAATGGAGGAGCATTTCATACAGAAGGCGGAGG...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGTCACCCTGAAGTGCTaGCTGGTGGTGGTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTVTLKC*LVVVAP
Trigger: TGGGGCAACCACCACCAGTCAGCACTTCAGGGTGAC...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTATTATGCTGTCACCCTaGAGTGCTGACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSIMLSP*SADWWW
Trigger: CCACCACCAGTCAGCACTTCAGGGTGACAGCATAAT...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGAGTCTTTCCAAGGTCTTaGGCTACCTTGTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRVFPRS*ATLFHP
Trigger: AGGGTGGAACAAGGTAGCTCAAGACCTTGGAAAGAC...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGCTGACAGCACCACCTTaGCGGTCAGCTGCATATCCA +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQLTAPP*RSAAYP
Trigger: TGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAG...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGCTGCAGCCCTGTGGTaGTTCAGCCCGCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFAAALW*FSPLAA
Trigger: AGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAACAGCTGCCGTCGGCTaGTGCAATGAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTTAAVG*CNESSW
Trigger: CCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGT...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGATGGGGAGGTTCTAGTTaGCCCAGTCCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRWGGSS*PSPGCS
Trigger: TGAGCATCCAGGACTGGGGCAACTAGAACCTCCCCA...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCGGCGGCTCTTTCGGCTaGACCCTTTGTGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFGGSFG*TLCVTG
Trigger: GCCGGTGACACAAAGGGTGCAGCCGAAAGAGCCGCC...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGCACCTCATAGCAATTaGCCAGATCCAGGCGGACCT +
Preference number: 4 (lower is better)
Translates to: RFMPSVDTELECGLGWVQAPHSN*PDPGGP
Trigger: AGGTCCGCCTGGATCTGGGCAATTGCTATGAGGTGC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACACAACTAGCGAGGGGCTaGTGGGGTCAACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTQLARG*WGQLAP
Trigger: AGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAGTTG...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGTCCTGGAAGGACAGGTaGTTTCCTGAGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVSWKDR*FPEAGG
Trigger: ACCCCCAGCCTCAGGAAAGCACCTGTCCTTCCAGGA...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATTTCTGGTTTCCTGGCTaGGGCAGCAAGGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDFWFPG*GSKEAP
Trigger: AGGTGCCTCCTTGCTGCCCCAGCCAGGAAACCAGAA...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGACGGTGGCCTAGGGGATaGAACCTCAGTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGRWPRG*NLSQGC
Trigger: GCAGCCCTGACTGAGGTTCCATCCCCTAGGCCACCG...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGAACTCCGCAGCTCCTTaGGCACAAACCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQNSAAP*AQTWVR
Trigger: TCTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTT...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGGAATGCCTTCTGCCTTaGAACACCAGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQECLLP*NTSSWS
Trigger: GGACCAGGAGCTGGTGTTCCAAGGCAGAAGGCATTC...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTCTAGCGAGGGGCTGCTaGGGTCAACTGGCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSLARGC*GQLAPR
Trigger: TCTAGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAG...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGGGCCGAGGAGCAGGGTaGCCCTTGGATCACATAGTT +
Preference number: 4 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVGRGAG*PLDHIV
Trigger: AACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCC...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGGACCACCTGGGAAACTaGGAAGAACTTTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: PISPGFWLGPRASLPSHLDHLGN*EELSLL
Trigger: TAAAAGAGAAAGTTCTTCCCAGTTTCCCAGGTGGTC...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAAGCCACTGGCAGAGCCTaGTGCCAGAGCCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQATGRA*CQSPDQ
Trigger: CTGGTCTGGGCTCTGGCACCAGGCTCTGCCAGTGGC...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 72 bp AGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTaGTCAGGCCCTGCTCTGGTGTACCTCCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: RTLRSKASLFSS*SGPALVYLPSP
Trigger: GGGAGATGGGAGGTACACCAGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGTGGAAGTGGCCCCCGTaGCCAGGACATAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQWKWPP*PGHRGL
Trigger: GAGGCCCCTATGTCCTGGTCACGGGGGCCACTTCCA...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTTTATCAAACCAGATGTaGAAGGAGATCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPLSNQM*KEIQSL
Trigger: CAGAGACTGGATCTCCTTTCACATCTGGTTTGATAA...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCGTGCTTCAGCCCGCTTaGTGCTCCTCCGACGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFVLQPA*CSSDVL
Trigger: CAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCAC...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATGGTTCATGTCACTGCTaGCTTGCAAGGGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDGSCHC*LAREPR
Trigger: ACGTGGCTCCCTTGCAAGGCAGCAGTGACATGAACC...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAAGCTCCTTCCTGGCCCTaGCCAAGTCACCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQAPSWP*PSHLPP
Trigger: TGGAGGCAGGTGACTTGGGCAGGGCCAGGAAGGAGC...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATTTCCTTGTCAGGCCCTaGTCTGGTGTACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDFLVRP*SGVPPI
Trigger: GATGGGAGGTACACCAGAGCAGGGCCTGACAAGGAA...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTTCCCTTGGAGGTTCATaGCTAGTGTTGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSSLGGS*LVLTLS
Trigger: GCTCAGTGTCAACACTAGGCATGAACCTCCAAGGGA...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCTCCAAATGCCAGTCCTaGGCCTCTGCTCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFSKCQS*ASAPLG
Trigger: CCCCAGAGGAGCAGAGGCCCAGGACTGGCATTTGGA...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTCTGCAGCTGCAGCTCTaGGTTCTCCGCTATCTGCAG +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSLQLQL*VLRYLQ
Trigger: CTGCAGATAGCGGAGAACCCAGAGCTGCAGCTGCAG...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAGGGGTGAGCGGGATATaGAAGAAATTGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTGVSGI*KKLVPA
Trigger: GGCCGGGACCAATTTCTTCCATATCCCGCTCACCCC...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTATGCCCCCTAAGCTTTaGTGGGGTCCCGGTGTATCC +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSMPPKL*WGPGVS
Trigger: GGATACACCGGGACCCCACCAAAGCTTAGGGGGCAT...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCGTCGGCTGCTGCAATaGGTCCAGCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQRRLLQ*VQLGSS
Trigger: AGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTATGCGGCAAACCAGGTaGCCGTACCTGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFMRQTR*PYLAQG
Trigger: TCCTTGTGCCAGGTACGGTCACCTGGTTTGCCGCAT...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CCTCTTGATGGCCACATTCCTGGGTTGCCTGTTTGCCTAGAAATGGCCCCCAGATCAAGACAAGGACACTaGGGTCCAAAGCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: PLDGHIPGLPVCLEMAPRSRQGH*GPKHPY
Trigger: ATAAGGATGCTTTGGACCTCAGTGTCCTTGTCTTGA...TCTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCCATCAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ACAGGTGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGGACATGAATGCCTTCTaGCTTGGAACACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGAFLRLGVSFIRSLSNQDMNAF*LGTPAP
Trigger: AGGAGCTGGTGTTCCAAGGCAGAAGGCATTCATGTC...CTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGACCAAGAGCATCACTaGCTTCCCATCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: MWALVYFLASKSLLGWPQDQEHH*LPICHC
Trigger: ACAGTGACAGATGGGAAGGCAGTGATGCTCTTGGTC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAAGGGCCTCTGCTCCTCTaGGGAACATGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQGPLLL*GTCFSS
Trigger: GCTGGAGAAGCATGTTCCCCAGAGGAGCAGAGGCCC...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAACCCAAGCGGGGGAAATaGGGAGGGTCAGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQPKRGK*GGSGLL
Trigger: CAGTAACCCTGACCCTCCCCATTTCCCCCGCTTGGG...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTTGCAATGAGTCCAGCTaGGGAGCTCTTCGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSCNESS*GALRFA
Trigger: AGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCA...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGGTGAAGACCCAGCTCTaGTTCATGTCACTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVVKTQL*FMSLLP
Trigger: AGGCAGCAGTGACATGAACCAGAGCTGGGTCTTCAC...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGACTAGCTGGGACCACCTaGGAAACTGGGAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRLAGTT*ETGKNF
Trigger: AAAGTTCTTCCCAGTTTCCCAGGTGGTCCCAGCTAG...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTGACACAGGATCTAGCTaGGACCACCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSDTGSS*DHLGNW
Trigger: CCAGTTTCCCAGGTGGTCCCAGCTAGATCCTGTGTC...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCACCAGCAGCTTCCGTaGACACAGGATCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFHQQLP*TQDLAG
Trigger: CCCAGCTAGATCCTGTGTCCACGGAAGCTGCTGGTG...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAAACAAGACCCACAGCCTaGGCACCAGCAGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQTRPTA*APAASV
Trigger: CACGGAAGCTGCTGGTGCCCAGGCTGTGGGTCTTGT...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGAATGTGGCCTTGGCTaGGTTCAGGGGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFECGLG*VQGSLS
Trigger: GGAGAGTGACCCCTGAACCCAGCCAAGGCCACATTC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAGCCCACAGGTCCCTTaGAGGTTCATGCCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDSPQVP*RFMPSV
Trigger: AACACTAGGCATGAACCTCCAAGGGACCTGTGGGCT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGAGTTTCTTCCCTTTGCTaGGACCTCCGTGTATCCTTA +
Preference number: 4 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRVSSLC*DLRVSL
Trigger: TAAGGATACACGGAGGTCTCAGCAAAGGGAAGAAAC...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAACCTTGCCGGTCAGCTaGATATCCAAATGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTTLPVS*ISKCQS
Trigger: GGACTGGCATTTGGATATGCAGCTGACCGGCAAGGT...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTTTGGATTCTCACAGCTaGAGCCCTGTGGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSLDSHS*SPVVLQ
Trigger: CTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAA...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAATGCCCCAGTCCTGGATaGTCACGGGGTTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQCPSPG*SRGLLS
Trigger: GGACAGTAAACCCCGTGAGCATCCAGGACTGGGGCA...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCGTAGATGTCCGGGCTaGGCAGCACCTGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQRRCPG*AAPAGS
Trigger: ACTACCTGCAGGTGCTGCGCAGCCCGGACATCTACG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAATGGGAACTGTGGAGGTaGGGCCCAGTGGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQWELWR*GPVADV
Trigger: AACATCAGCCACTGGGCCCCACCTCCACAGTTCCCA...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGATGGTGGTCTTCGGTaGTCCAGTGCAAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFDGGLR*SSASSP
Trigger: AGGAGAGCTTGCACTGGACCACCGAAGACCACCATC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCAAGGGCGGTCATCCCTaGAGACATGAATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFKGGHP*RHECLL
Trigger: CAGAAGGCATTCATGTCTTCAGGGATGACCGCCCTT...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTGGGCAGACAGGGACATaGATTGTCCTTCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSGQTGT*IVLPIF
Trigger: GAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCC...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCAGCTGCATATCCAAATaGCAGTCCTGGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFSCISK*QSWASA
Trigger: AGCAGAGGCCCAGGACTGGCATTTGGATATGCAGCT...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTCAAGACAACGGGGTTTACTGTCCTaGCATGGAGAAGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: IYPQGRQGHELSFPFSRQRGLLS*HGEGSP
Trigger: TGGTGAGCCTTCTCCATGGCAGGACAGTAAACCCCG...TTGTCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGGGGTTCTCCGCTATCTaGAGAAGGCTCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQGFSAI*RRLSFR
Trigger: CCGGAAGGAGAGCCTTCTGCAGATAGCGGAGAACCC...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGACCTGTGTGTCCCGGTaGTTCTGGGAACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQTCVSR*FWELWR
Trigger: CCTCCACAGTTCCCAGAAGCACCGGGACACACAGGT...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAAGGAGGGCAAATTATaGTGTCACCCTGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDKEGKL*CHPEVL
Trigger: CAGCACTTCAGGGTGACAGCATAATTTGCCCTCCTT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp CTACCACAGGTATGCAATGGGCTTTGGAATGTTTTTCCAGAGTGGTCCTTGTTCTTCGGACGCGGGCTATaGATGAGAAGGTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPQVCNGLWNVFPEWSLFFGRGL*MRRYRR
Trigger: CCTCCTATACCTTCTCATCCATAGCCCGCGTCCGAA...GAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
3UTR CAA 72 bp ACTCCCCTAGTCTCTACCACAGGTATGCAATGGGCTTaGGAATGTTTTTCCAGAGTGGTCCTTGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TPLVSTTGMQWA*ECFSRVVLVPP
Trigger: AGGAGGAACAAGGACCACTCTGGAAAAACATTCCAAAGCCCATTGCATACCTGTGGTAGAGACTAGGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGATGGCTCCTAGAATTGTaGTTGCAAAAAGACTATGCC +
Preference number: 4 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRWLLEL*LQKDYA
Trigger: GGCATAGTCTTTTTGCAATCACAATTCTAGGAGCCA...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGAAGGACGACTGATGAATaGTTTTGCCAATGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRRTTDE*FCQWNH
Trigger: ATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCT...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGGGATCTAGGTCCACCTaGCCCCAGCTCCTATGTAGA +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQGSRST*PQLLCR
Trigger: TCTACATAGGAGCTGGGGGCAGGTGGACCTAGATCC...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGATCTCCCCTGGCTTCTaGCTGGGACCAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQISPGF*LGPRAS
Trigger: TGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGAT...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR TCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGTTTGAGTCTTGTCACTaGAGCCATTCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQFESCH*SHSAPA
Trigger: GGCTGGGGCAGAATGGCTTCAGTGACAAGACTCAAA...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGTCTGGTTCATGTCACTaGTGCCTTGCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQSGSCH*CLAREP
Trigger: TGGCTCCCTTGCAAGGCAGCAGTGACATGAACCAGA...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATGATAGCTTGGTACAATaGCTGCTTCTCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDDSLVQ*LLLFLP
Trigger: TGGAAGAAAGAGAAGCAGCCATTGTACCAAGCTATC...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAAATGTTTTTCCAGAGTaGTCCTTGTTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGNVFPE*SLFLLG
Trigger: GCCCAGGAGGAACAAGGACCACTCTGGAAAAACATT...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CCA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACAACCACAGGTATGCAATaGGCTTTGGAATGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTTTGMQ*ALECFS
Trigger: GGAAAAACATTCCAAAGCCCATTGCATACCTGTGGT...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAAGAATAAATTCAGTTaGTTCATCTTTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDKNKFS*FIFRGP
Trigger: TGGGCCTCGAAAGATGAAGCAACTGAATTTATTCTT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTTCTCTACCACAGGTATaGAATGGGCTTTGGAATGTT +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFSLPQV*NGLWNV
Trigger: AACATTCCAAAGCCCATTGCATACCTGTGGTAGAGA...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTAGATCTGAGAATGAGTaGAATGGTCAGTTAACATGG +
Preference number: 4 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFRSENE*NGQLTW
Trigger: CCATGTTAACTGACCATTGCACTCATTCTCAGATCT...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR GCA 90 bp ATAGGACGACTGATGAATGATTTTGCCAATGGAACCATAAGAGAGGTGGATCAGCTCCTCTTATGTCCATaGCAACCTCCTTTTCATCCT +
Preference number: 4 (lower is better)
Translates to: IGRLMNDFANGTIREVDQLLLCP*QPPFHP
Trigger: AGGATGAAAAGGAGGTTGGCATGGACATAAGAGGAG...CTGATCCACCTCTCTTATGGTTCCATTGGCAAAATCATTCATCAGTCGTCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CGGTCCTTGCTGCCCCCGGTGGGGCCGGCCCACCAGCGCTGCTCCTaGGCAGAGAAGCGGAACAGCAGGAAGCGCAGCGAGCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RSLLPPVGPAHQRCS*AEKRNSRKRSEPPV
Trigger: CACCGGCGGCTCGCTGCGCTTCCTGCTGTTCCGCTTCTCTGCGCAGGAGCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAGCAAGGACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GCCGTGCGGTCCTTGCTGCCCCCGGTGGGGCCGGCCCACCAGCGCTaGTCCTGCGCAGAGAAGCGGAACAGCAGGAAGCGCAGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: AVRSLLPPVGPAHQR*SCAEKRNSRKRSEP
Trigger: CGGCTCGCTGCGCTTCCTGCTGTTCCGCTTCTCTGCGCAGGAGCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAGCAAGGACCGCACGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CCTTGGCACGCACCGTGGCCGTGTGCGCCAGGGCGAACGTGTCACTaGGGAGCGGCGGGGCAAAGTCCCAGCGGTCCAGGCGGGGGTCGT +
Preference number: 5 (lower is better)
Translates to: PWHAPWPCAPGRTCH*GAAGQSPSGPGGGR
Trigger: ACGACCCCCGCCTGGACCGCTGGGACTTTGCCCCGCCGCTCCCCAGTGACACGTTCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GGTGGAGGGCCACGGCCCTGTCTGCGGGGAGGCGGCTCTTTCGGCTaGACCCTTTGTGTCACCGGCTTGGCCTCCCGAGGCAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GGGPRPCLRGGGSFG*TLCVTGLASRGSPC
Trigger: ACAGGGGCTGCCTCGGGAGGCCAAGCCGGTGACACAAAGGGTGCAGCCGAAAGAGCCGCCTCCCCGCAGACAGGGCCGTGGCCCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GGAAGAAATTGGTCCCGGCCACCGGCTGCACATGGGGCTCCCGGCTaGTTCTGCCTAAGCCAGGCAGGGCGCCCGGGTCTGGGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRNWSRPPAAHGAPG*FCLSQAGRPGLGRV
Trigger: CACCCTGCCCAGACCCGGGCGCCCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 90 bp GCAGCTCTGGGTTCTCCGCTATCTGCAGAAGGCTCTCCTTCCGGCTaGAGCCTCGGGTGGAGGGCCACGGCCCTGTCTGCGGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: AALGSPLSAEGSPSG*SLGWRATALSAGRR
Trigger: CCGCCTCCCCGCAGACAGGGCCGTGGCCCTCCACCCGAGGCTTCAGCCGGAAGGAGAGCCTTCTGCAGATAGCGGAGAACCCAGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GAGCCGCCGGTGACGAAGATTTCCTTGGCACGCACCGTGGCCGTGTaGGCCAGGGCGAACGTGTCACTGGGGAGCGGCGGGGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: EPPVTKISLARTVAV*ARANVSLGSGGAKS
Trigger: GGACTTTGCCCCGCCGCTCCCCAGTGACACGTTCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCACCGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GAGGCAAATCGGGGGTGGGCAAGGTCAGGACGGTGGGCAGGAGGGTaGCCTGCGGGGCCGGGAAACTCCGCAGCTCCTTGGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: EANRGWARSGRWAGG*PAGPGNSAAPWAQT
Trigger: GGTTTGTGCCCAAGGAGCTGCGGAGTTTCCCGGCCCCGCAGGGCACCCTCCTGCCCACCGTCCTGACCTTGCCCACCCCCGATTTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CCACCACGGCGCACTGGAAGGCATCCGGGTAAGGCGTCCGGTACGTaGCGCACTCGTACCAGAGCCGGGTGCTGGCGCTGCAGCGGTACA +
Preference number: 5 (lower is better)
Translates to: PPRRTGRHPGKASGT*RTRTRAGCWRCSGT
Trigger: TGTACCGCTGCAGCGCCAGCACCCGGCTCTGGTACGAGTGCGCCACGTACCGGACGCCTTACCCGGATGCCTTCCAGTGCGCCGTGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 90 bp CCTGCGCAGAGAAGCGGAACAGCAGGAAGCGCAGCGAGCCGCCGGTaGCGAAGATTTCCTTGGCACGCACCGTGGCCGTGTGCGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PAQRSGTAGSAASRR*RRFPWHAPWPCAPG
Trigger: CCCTGGCGCACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCACCGGCGGCTCGCTGCGCTTCCTGCTGTTCCGCTTCTCTGCGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CCCGGGTCTGGGCAGGGTGGAGCGGGGAGCCGGAAGCCATCTGGCTaGAGCTGCAGCTCTGGGTTCTCCGCTATCTGCAGAAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PGSGQGGAGSRKPSG*SCSSGFSAICRRLS
Trigger: GGAGAGCCTTCTGCAGATAGCGGAGAACCCAGAGCTGCAGCTGCAGCCAGATGGCTTCCGGCTCCCCGCTCCACCCTGCCCAGACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp GTGAGCGGGATATGGAAGAAATTGGTCCCGGCCACCGGCTGCACATaGGGCTCCCGGCTGCTTCTGCCTAAGCCAGGCAGGGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VSGIWKKLVPATGCT*GSRLLLPKPGRAPG
Trigger: CCCGGGCGCCCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCCATATCCCGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CCAACAGCTGTTCTGGTTTCCTGGCTGGGGCAGCAAGGAGGCACCTaGTCAGAGTCCGAGCCCTGCCCGCCCCGCTCCTCACCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: PTAVLVSWLGQQGGT*SESEPCPPRSSPEP
Trigger: AGGCTCAGGTGAGGAGCGGGGCGGGCAGGGCTCGGACTCTGAGCAGGTGCCTCCTTGCTGCCCCAGCCAGGAAACCAGAACAGCTGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GCAGGGGTGAGCGGGATATGGAAGAAATTGGTCCCGGCCACCGGCTaGACATGGGGCTCCCGGCTGCTTCTGCCTAAGCCAGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: AGVSGIWKKLVPATG*TWGSRLLLPKPGRA
Trigger: CGCCCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCCATATCCCGCTCACCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp GCAGCCCTGTGGTGCTTCAGCCCGCTTGCTGCTCCTCCGACGTCTTaGCCCCCTCAGGAGCACCCCAGGAGAAGCCTCCTGTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: AALWCFSPLAAPPTS*PPQEHPRRSLLYSR
Trigger: CCTGCTGTACAGGAGGCTTCTCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CTCACCACCGGCACAGCTGCCGTCGGCTGCTGCAATGAGTCCAGCTaGGGAGCTCTTCGGTTCGCTGCCCAAGCGGGGGAAATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LTTGTAAVGCCNESS*GALRFAAQAGEMGR
Trigger: CCTCCCCATTTCCCCCGCTTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 90 bp ATGGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTGCTGCAATaGGTCCAGCTGGGGAGCTCTTCGGTTCGCTGCCCAAGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: MEKAHHRHSCRRLLQ*VQLGSSSVRCPSGG
Trigger: TCCCCCGCTTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CTGCCATGGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTGCTaGAATGAGTCCAGCTGGGGAGCTCTTCGGTTCGCTGCCCAAGCG +
Preference number: 5 (lower is better)
Translates to: LPWRRLTTGTAAVGC*NESSWGALRFAAQA
Trigger: CGCTTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCATGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp GGGGAGGGTCAGGGTTACTGCCAACAGCTGTTCTGGTTTCCTGGCTaGGGCAGCAAGGAGGCACCTGCTCAGAGTCCGAGCCCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GEGQGYCQQLFWFPG*GSKEAPAQSPSPAR
Trigger: GCGGGCAGGGCTCGGACTCTGAGCAGGTGCCTCCTTGCTGCCCCAGCCAGGAAACCAGAACAGCTGTTGGCAGTAACCCTGACCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CATCCTGCTCATCGTCATAGCAACAGAGGCCGCCGGAGTCTTCCTTaGGGCACACGTCAGCCACCACCAGGTACTGGCGGCCCCGGAGCC +
Preference number: 5 (lower is better)
Translates to: HPAHRHSNRGRRSLP*GTRQPPPGTGGPGA
Trigger: GGCTCCGGGGCCGCCAGTACCTGGTGGTGGCTGACGTGTGCCCCAAGGAAGACTCCGGCGGCCTCTGTTGCTATGACGATGAGCAGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp TGCCCTGCGGGGCCGGGAAACTCCGCAGCTCCTTGGGCACAAACCTaGGTGAGACAGAGTCTGCTAGGAAGCAGAGGGTGCTCCGGCGTC +
Preference number: 5 (lower is better)
Translates to: CPAGPGNSAAPWAQT*VRQSLLGSRGCSGV
Trigger: GACGCCGGAGCACCCTCTGCTTCCTAGCAGACTCTGTCTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTTTCCCGGCCCCGCAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CTCTTGGATTCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTTaGTGCTCCTCCGACGTCTTGGCCCCCTCAGGAGCACCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LLDSHSCSPVVLQPA*CSSDVLAPSGAPQE
Trigger: CTCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GTCCTGCCATGGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTaGTGCAATGAGTCCAGCTGGGGAGCTCTTCGGTTCGCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: VLPWRRLTTGTAAVG*CNESSWGALRFAAQ
Trigger: TTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCATGGCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CGGAAGCCATCTGGCTGCAGCTGCAGCTCTGGGTTCTCCGCTATCTaGAGAAGGCTCTCCTTCCGGCTGAAGCCTCGGGTGGAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RKPSGCSCSSGFSAI*RRLSFRLKPRVEGH
Trigger: GTGGCCCTCCACCCGAGGCTTCAGCCGGAAGGAGAGCCTTCTGCAGATAGCGGAGAACCCAGAGCTGCAGCTGCAGCCAGATGGCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp TCAGCTCGCGCTCTGCCCCGCTCAGGCACCCGTAGATGTCCGGGCTaGGCAGCACCTGCAGGTAGTTTTCGCTCATCACCTTGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: SARALPRSGTRRCPG*AAPAGSFRSSPCRP
Trigger: CGGCCTACAAGGTGATGAGCGAAAACTACCTGCAGGTGCTGCGCAGCCCGGACATCTACGGGTGCCTGAGCGGGGCAGAGCGCGAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp TTCCTCCTTGGCTTCTGCCTGGCCATTCCCACCCCACCGCTGGGCTaGGGCAGGCCTCGACTTGTACAGCCTGTAGGCCACAGTCACCAG +
Preference number: 5 (lower is better)
Translates to: FLLGFCLAIPTPPLG*GRPRLVQPVGHSHQ
Trigger: CTGGTGACTGTGGCCTACAGGCTGTACAAGTCGAGGCCTGCCCCAGCCCAGCGGTGGGGTGGGAATGGCCAGGCAGAAGCCAAGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp GTTTGCCTAGAAATGGCCCCCAGAGGGACGGCTGGCAGTGGAGCCCGGTGGCCCAGCTTGAATGTGGCCTaGGCTGGGTTCAGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: VCLEMAPRGTAGSGARWPSLNVA*AGFRGH
Trigger: GTGACCCCTGAACCCAGCCAAGGCCACATTCAAGCT...GGGCCACCGGGCTCCACTGCCAGCCGTCCCTCTGGGGGCCATTTCTAGGCAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp AGGCCACAGTCACCAGGAGCAGGGCAGCGGCTGACAGCACCACCTTaGCGGTCAGCTGCATATCCAAATGCCAGTCCTGGGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: RPQSPGAGQRLTAPP*RSAAYPNASPGPLL
Trigger: GAGCAGAGGCCCAGGACTGGCATTTGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCTGCTCCTGGTGACTGTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp TTGGATTCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTTGCTaGTCCTCCGACGTCTTGGCCCCCTCAGGAGCACCCCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LDSHSCSPVVLQPAC*SSDVLAPSGAPQEK
Trigger: CTTCTCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CAGGACATAGGGGCCTCTTGGATTCTCACAGCTGCAGCCCTGTGGTaGTTCAGCCCGCTTGCTGCTCCTCCGACGTCTTGGCCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: QDIGASWILTAAALW*FSPLAAPPTSWPPQ
Trigger: CTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAGGCCCCTATGTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp GACCAGGACATAGGGGCCTCTTGGATTCTCACAGCTGCAGCCCTGTaGTGCTTCAGCCCGCTTGCTGCTCCTCCGACGTCTTGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: DQDIGASWILTAAAL*CFSPLAAPPTSWPP
Trigger: AGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAGGCCCCTATGTCCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp GGTTCTAGTTGCCCCAGTCCTGGATGCTCACGGGGTTTACTGTCCTaGCATGGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GSSCPSPGCSRGLLS*HGEGSPPAQLPSAA
Trigger: AGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCATGGCAGGACAGTAAACCCCGTGAGCATCCAGGACTGGGGCAACTAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CCTGTCTGTGGAAGTGGCCCCCGTGACCAGGACATAGGGGCCTCTTaGATTCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: PVCGSGPRDQDIGAS*ILTAAALWCFSPLA
Trigger: AGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAGGCCCCTATGTCCTGGTCACGGGGGCCACTTCCACAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 90 bp CACCTTGCCGGTCAGCTGCATATCCAAATGCCAGTCCTGGGCCTCTaGTCCTCTGGGGAACATGCTTCTCCAGCCAACCTGGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HLAGQLHIQMPVLGL*SSGEHASPANLGLR
Trigger: CCTCAGCCCCAGGTTGGCTGGAGAAGCATGTTCCCCAGAGGAGCAGAGGCCCAGGACTGGCATTTGGATATGCAGCTGACCGGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp AGTCCAGCTGGGGAGCTCTTCGGTTCGCTGCCCAAGCGGGGGAAATaGGGAGGGTCAGGGTTACTGCCAACAGCTGTTCTGGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPAGELFGSLPKRGK*GGSGLLPTAVLVSW
Trigger: CCAGGAAACCAGAACAGCTGTTGGCAGTAACCCTGACCCTCCCCATTTCCCCCGCTTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 90 bp CCTCCATTCGGACGCGGGCTATGGATGAGAAGGTATAGGAGGAGTTaGGGGCGCCCTCCTGCTGATGCAGGGTCAGGTCAACATCGGAGG +
Preference number: 5 (lower is better)
Translates to: PPFGRGLWMRRYRRS*GRPPADAGSGQHRR
Trigger: CCTCCGATGTTGACCTGACCCTGCATCAGCAGGAGGGCGCCCCCAACTCCTCCTATACCTTCTCATCCATAGCCCGCGTCCGAATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGGCTGACAGCACCACCTaGCCGGTCAGCTGCATATCC +
Preference number: 5 (lower is better)
Translates to: PISPGFWLGPRASLPSHLADSTT*PVSCIS
Trigger: GGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGC...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCTGGTGCCAGAGCCCAGACCAGGGATGGTGGTCTTCGGTGGTCCAGTGCAAGCGTGTTGACACTGAGCTaGAATGTGGCCTTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGARAQTRDGGLRWSSASVLTLS*NVALAG
Trigger: CCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACAC...GCTTGCACTGGACCACCGAAGACCACCATCCCTGGTCTGGGCTCTGGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 90 bp CTTGTACAGCCTGTAGGCCACAGTCACCAGGAGCAGGGCAGCGGCTaGCAGCACCACCTTGCCGGTCAGCTGCATATCCAAATGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LVQPVGHSHQEQGSG*QHHLAGQLHIQMPV
Trigger: GACTGGCATTTGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCTGCTCCTGGTGACTGTGGCCTACAGGCTGTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGTCCAGGTTCTGCCTCTaGGCCAAGGTCAGCACCTCA +
Preference number: 5 (lower is better)
Translates to: PISPGFWLGPRASLPSHLSRFCL*AKVSTS
Trigger: TGAGGTGCTGACCTTGGCCAAGAGGCAGAACCTGGA...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTGTGACGAAGATTTCCTaGGCACGCACCGTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPVTKIS*ARTVAV
Trigger: CACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCAC...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp GTGCAATGGTCAGTTAACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCTCCTGGGTTGCCTGTTaGCCTAGAAATGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: VQWSVNMGRAEEQGGPWISWVAC*PRNGPQ
Trigger: CTGGGGGCCATTTCTAGGCAAACAGGCAACCCAGGA...GATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGTTAACTGACCATTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTAAACTCCGCAGCTCCTaGGGCACAAACCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPKLRSS*GTNLGE
Trigger: CTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTTT...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 90 bp CGCCTTCTGTATGAAATGCTCCTCCATTCGGACGCGGGCTATGGATaGGAAGGTATAGGAGGAGTTGGGGGCGCCCTCCTGCTGATGCAG +
Preference number: 5 (lower is better)
Translates to: RLLYEMLLHSDAGYG*EGIGGVGGALLLMQ
Trigger: CTGCATCAGCAGGAGGGCGCCCCCAACTCCTCCTATACCTTCTCATCCATAGCCCGCGTCCGAATGGAGGAGCATTTCATACAGAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATCTTTGTGTCACCGGCTaGGCCTCCCGAGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDLCVTG*ASRGSP
Trigger: GGGGCTGCCTCGGGAGGCCAAGCCGGTGACACAAAG...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGAGGTGCTTCAGCCCGCTaGCTGCTCCTCCGACGTCTT +
Preference number: 5 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRGASAR*LLLRRL
Trigger: AAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACC...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGCATGTCACTGCTGCCTaGCAAGGGAGCCACGTAGTG +
Preference number: 5 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLHVTAA*QGSHVV
Trigger: CACTACGTGGCTCCCTTGCAAGGCAGCAGTGACATG...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTCCGCCGGAGTCTTCCTaGGGGCACACGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSPPESS*GHTSAT
Trigger: GGTGGCTGACGTGTGCCCCAAGGAAGACTCCGGCGG...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCTTCCCATCTGCCACCAGAAGATAGCTaGGTACAATGGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PISPGFWLGPRASLPSHLPPEDS*VQWLLL
Trigger: GAGAAGCAGCCATTGTACCAAGCTATCTTCTGGTGG...CAGATGGGAAGGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGATGCTCCTCCGACGTCTaGGCCCCCTCAGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGCSSDV*APSGAP
Trigger: GGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCA...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTTCGTACACCTTGCCCTaGAGCCGGGGCTCAACCCCC +
Preference number: 5 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSSYTLP*SRGSTP
Trigger: GGGGGTTGAGCCCCGGCTCAAGGGCAAGGTGTACGA...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CTCTTTTCTGCAGTGGGGCCTCTGCAGCCCATGAAGGGTAAGACTCATCTAAGAGGGATATGGAAGAAATaGGTCCCGGCCACCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LFSAVGPLQPMKGKTHLRGIWKK*VPATGC
Trigger: GCAGCCGGTGGCCGGGACCAATTTCTTCCATATCCC...TCTTAGATGAGTCTTACCCTTCATGGGCTGCAGAGGCCCCACTGCAGAAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGCCCAAGAATTCAGAGTaGAAGCAAGGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLPKNSE*KQGRSS
Trigger: GGATGACCGCCCTTGCTTCAACTCTGAATTCTTGGG...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTGCTGACTGGTGGTGGTaGCCCCAGCTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSADWWW*PQLPDR
Trigger: CCTGTCTGGAAGCTGGGGCAACCACCACCAGTCAGC...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACATGGGCAGGGCCGAGGAGCAGGGTGGCCCTTGGATCACATAGTTTCTTCCCTCCTCCTTTTCATCCTTaGTTCCAGTCCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TWAGPRSRVALGSHSFFPPPFHP*FQSCFF
Trigger: GAAGAAGCAGGACTGGAACAAAGGATGAAAAGGAGG...AGGGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCCTCGGCCCTGCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp CCTAGGCTGGCCCCAGCTTCAGCTGTTCTACTTTTCAAACCACCACTCCCTCTGGGGCCTGGAACACATTaGTCCGTCTTATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PRLAPASAVLLFKPPLPLGPGTH*SVLSLE
Trigger: TTCCAGGGATAAGACGGACAAATGTGTTCCAGGCCC...CAGAGGGAGTGGTGGTTTGAAAAGTAGAACAGCTGAAGCTGGGGCCAGCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGGGACATAGGGGCCTCTaGGATTCTCACAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVGHRGL*DSHSCS
Trigger: GCTGCAGCTGTGAGAATCCAAGAGGCCCCTATGTCC...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TGGAACACATTTGTCCGTCTTATCCCTGGAATCACTCCCCTAGTCTCTACCACATTTCGGCTGCACCCTTaGTGTCACCGGCTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: WNTFVRLIPGITPLVSTTFRLHP*CHRLGL
Trigger: GAGGCCAAGCCGGTGACACAAAGGGTGCAGCCGAAA...TGTGGTAGAGACTAGGGGAGTGATTCCAGGGATAAGACGGACAAATGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TGGTGGTTGCCCCAGCTTCCAGACAGGAAGACGGCTACAGATCTGAGAATGAGTACCGGAATTCACCTCTaGATGGCCACATTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: WWLPQLPDRKTATDLRMSTGIHL*MATFLG
Trigger: ACCCAGGAATGTGGCCATCAAGAGGTGAATTCCGGT...ACTCATTCTCAGATCTGTAGCCGTCTTCCTGTCTGGAAGCTGGGGCAACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp AGGTTCATGCCTAGTGTTGACACTGAGCTTGAATGTGGCCTTGGCTGGGTTCAGGGAGCAGGGTGGCCCTaGGATCACATAGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RFMPSVDTELECGLGWVQGAGWP*DHIVSS
Trigger: GGAAGAAACTATGTGATCCAAGGGCCACCCTGCTCC...CTGAACCCAGCCAAGGCCACATTCAAGCTCAGTGTCAACACTAGGCATGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TGGTGTACCTCCCATCTCCCCTGGCTTCTGGCTGGGACCAAGAGCATCACTGCCAAAGTAATGTGGGCTTaGGTATATTTTCTCGCAAGC +
Preference number: 5 (lower is better)
Translates to: WCTSHLPWLLAGTKSITAKVMWA*VYFLAS
Trigger: GCTTGCGAGAAAATATACCAAAGCCCACATTACTTT...GGCAGTGATGCTCTTGGTCCCAGCCAGAAGCCAGGGGAGATGGGAGGTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp AAGGACACTGAGGTCCAAAGCATCCTTATTTTCTTCCTTGTCAGGCCCTGCTCTGGCCACATTCCTGGGTaGCCTGTTTGCCTAGAAATG +
Preference number: 5 (lower is better)
Translates to: KDTEVQSILIFFLVRPCSGHIPG*PVCLEM
Trigger: CATTTCTAGGCAAACAGGCAACCCAGGAATGTGGCC...AGAGCAGGGCCTGACAAGGAAGAAAATAAGGATGCTTTGGACCTCAGTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TGCTTTCCTGAGGCTGGGGGTCTCCTTCATTCGGAGTTTATCAAACCAGATGTGTGTCTTTCCAAGGTCTaGAGCTACCTTGTTCCACCC +
Preference number: 5 (lower is better)
Translates to: CFPEAGGLLHSEFIKPDVCLSKV*SYLVPP
Trigger: GGGTGGAACAAGGTAGCTCAAGACCTTGGAAAGACA...CACATCTGGTTTGATAAACTCCGAATGAAGGAGACCCCCAGCCTCAGGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ATGTGGGCTTTGGTATATTTTCTCGCAAGCAAGAGTCTCCTAGGCTGGCCCCAGGGTATGCAATGGGCTTaGGAATGTTTTTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: MWALVYFLASKSLLGWPQGMQWA*ECFSRV
Trigger: CACTCTGGAAAAACATTCCAAAGCCCATTGCATACC...CTGGGGCCAGCCTAGGAGACTCTTGCTTGCGAGAAAATATACCAAAGCCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGAAAACTGCAAGGACGATaGTGCCCTCAGGGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGKLQGR*CPQGVF
Trigger: AAAGACACCCTGAGGGCACAATCGTCCTTGCAGTTT...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp TTCTTCCCTTTGCTGAGACCTCCGTGTATCCTTAGCAGACCTCCACCAGAAGATAGACAGGGACATGAATaGTCCTTCCCATTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: FFPLLRPPCILSRPPPEDRQGHE*SFPFSR
Trigger: TCTTGAAAATGGGAAGGACAATTCATGTCCCTGTCT...ATCTTCTGGTGGAGGTCTGCTAAGGATACACGGAGGTCTCAGCAAAGGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ATCCTCTCATTTATCCCCAGGGCAGACAGGGACATGAATTGTCCTTCCCATTTTGGTTCATGCCTAGTGTaGACACTGAGCTTGAATGTG +
Preference number: 5 (lower is better)
Translates to: ILSFIPRADRDMNCPSHFGSCLV*TLSLNV
Trigger: CACATTCAAGCTCAGTGTCAACACTAGGCATGAACC...AAAATGGGAAGGACAATTCATGTCCCTGTCTGCCCTGGGGATAAATGAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS-3UTR CAA 90 bp ACTGGGAAGAACTTTCTCTTTTATCCTCTCATTTATCCCCAGGGCAGACAGGGATTGTTCCTCCTGGGCTaGGAAACTTTCCAGAACTTT +
Preference number: 5 (lower is better)
Translates to: TGKNFLFYPLIYPQGRQGLFLLG*ETFQNF
Trigger: AAAGTTCTGGAAAGTTTCCAAGCCCAGGAGGAACAA...TCCCTGTCTGCCCTGGGGATAAATGAGAGGATAAAAGAGAAAGTTCTTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp GCCCCGGAGCCGGCGCTGCAGGATCAGCTCGCGCTCTaGCCCGCTCAGGCACCCGTAGATGTCCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: APEPALQDQLAL*PAQAPVDVRAA
Trigger: CGCAGCCCGGACATCTACGGGTGCCTGAGCGGGGCAGAGCGCGAGCTGATCCTGCAGCGCCGGCTCCGGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp CCACCATCTCGGCCGTGCGGTCCTTGCTGCCCCCGGTaGGGCCGGCCCACCAGCGCTGCTCCTGCGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PPSRPCGPCCPR*GRPTSAAPAQR
Trigger: TCTCTGCGCAGGAGCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAGCAAGGACCGCACGGCCGAGATGGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp AAGCCGTTGACCGCCACCATCTCGGCCGTGCGGTCCTaGCTGCCCCCGGTGGGGCCGGCCCACCAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: KPLTATISAVRS*LPPVGPAHQRC
Trigger: GCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAGCAAGGACCGCACGGCCGAGATGGTGGCGGTCAACGGCTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TGGTCCCGGCCACCGGCTGCACATGGGGCTCCCGGCTaGTTCTGCCTAAGCCAGGCAGGGCGCCCGGGTCTG +
Preference number: 6 (lower is better)
Translates to: WSRPPAAHGAPG*FCLSQAGRPGL
Trigger: CAGACCCGGGCGCCCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp CTGCCCCCGGTGGGGCCGGCCCACCAGCGCTGCTCCTaGGCAGAGAAGCGGAACAGCAGGAAGCGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: LPPVGPAHQRCS*AEKRNSRKRSE
Trigger: CTCGCTGCGCTTCCTGCTGTTCCGCTTCTCTGCGCAGGAGCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp CGGGGGTGGGCAAGGTCAGGACGGTGGGCAGGAGGGTaGCCTGCGGGGCCGGGAAACTCCGCAGCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RGWARSGRWAGG*PAGPGNSAAPW
Trigger: CCAAGGAGCTGCGGAGTTTCCCGGCCCCGCAGGGCACCCTCCTGCCCACCGTCCTGACCTTGCCCACCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GCACCGTGGCCGTGTGCGCCAGGGCGAACGTGTCACTaGGGAGCGGCGGGGCAAAGTCCCAGCGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: APWPCAPGRTCH*GAAGQSPSGPG
Trigger: GCCTGGACCGCTGGGACTTTGCCCCGCCGCTCCCCAGTGACACGTTCGCCCTGGCGCACACGGCCACGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TCCTTGCTGCCCCCGGTGGGGCCGGCCCACCAGCGCTaGTCCTGCGCAGAGAAGCGGAACAGCAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SLLPPVGPAHQR*SCAEKRNSRKR
Trigger: GCGCTTCCTGCTGTTCCGCTTCTCTGCGCAGGAGCAGCGCTGGTGGGCCGGCCCCACCGGGGGCAGCAAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp GCGTCCGGTACGTGGCGCACTCGTACCAGAGCCGGGTaGTGGCGCTGCAGCGGTACACGGCGATGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: ASGTWRTRTRAG*WRCSGTRRCPG
Trigger: GCCTGGGCATCGCCGTGTACCGCTGCAGCGCCAGCACCCGGCTCTGGTACGAGTGCGCCACGTACCGGACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp CCACGGCCCTGTCTGCGGGGAGGCGGCTCTTTCGGCTaGACCCTTTGTGTCACCGGCTTGGCCTCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: PRPCLRGGGSFG*TLCVTGLASRG
Trigger: GCCTCGGGAGGCCAAGCCGGTGACACAAAGGGTGCAGCCGAAAGAGCCGCCTCCCCGCAGACAGGGCCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp TCCGGTACGTGGCGCACTCGTACCAGAGCCGGGTGCTaGCGCTGCAGCGGTACACGGCGATGCCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SGTWRTRTRAGC*RCSGTRRCPGC
Trigger: GCAGCCTGGGCATCGCCGTGTACCGCTGCAGCGCCAGCACCCGGCTCTGGTACGAGTGCGCCACGTACCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp CGCACTGGAAGGCATCCGGGTAAGGCGTCCGGTACGTaGCGCACTCGTACCAGAGCCGGGTGCTGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RTGRHPGKASGT*RTRTRAGCWRC
Trigger: GCAGCGCCAGCACCCGGCTCTGGTACGAGTGCGCCACGTACCGGACGCCTTACCCGGATGCCTTCCAGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp CTGTCTGCGGGGAGGCGGCTCTTTCGGCTGCACCCTTaGTGTCACCGGCTTGGCCTCCCGAGGCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LSAGRRLFRLHP*CHRLGLPRQPL
Trigger: CAGGGGCTGCCTCGGGAGGCCAAGCCGGTGACACAAAGGGTGCAGCCGAAAGAGCCGCCTCCCCGCAGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp CACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTTGCTaGTCCTCCGACGTCTTGGCCCCCTCAGGAGCACCC +
Preference number: 6 (lower is better)
Translates to: HSCSPVVLQPAC*SSDVLAPSGAP
Trigger: GGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp GTGACGAAGATTTCCTTGGCACGCACCGTGGCCGTGTaGGCCAGGGCGAACGTGTCACTGGGGAGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: VTKISLARTVAV*ARANVSLGSGG
Trigger: CCCGCCGCTCCCCAGTGACACGTTCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GGCTTCTGCCTGGCCATTCCCACCCCACCGCTGGGCTaGGGCAGGCCTCGACTTGTACAGCCTGTAGGCCAC +
Preference number: 6 (lower is better)
Translates to: GFCLAIPTPPLG*GRPRLVQPVGH
Trigger: GTGGCCTACAGGCTGTACAAGTCGAGGCCTGCCCCAGCCCAGCGGTGGGGTGGGAATGGCCAGGCAGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp AGGAAGCGCAGCGAGCCGCCGGTGACGAAGATTTCCTaGGCACGCACCGTGGCCGTGTGCGCCAGGGCGAAC +
Preference number: 6 (lower is better)
Translates to: RKRSEPPVTKIS*ARTVAVCARAN
Trigger: GTTCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCACCGGCGGCTCGCTGCGCTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 90 bp CGGAACAGCAGGAAGCGCAGCGAGCCGCCGGTGACGAAGATTTCCTaGGCACGCACCGTGGCCGTGTGCGCCAGGGCGAACGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: RNSRKRSEPPVTKIS*ARTVAVCARANVSL
Trigger: CAGTGACACGTTCGCCCTGGCGCACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCACCGGCGGCTCGCTGCGCTTCCTGCTGTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 72 bp GCTCACCACCGGCACAGCTGCCGTCGGCTGCTGCAATaGGTCCAGCTGGGGAGCTCTTCGGTTCGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: AHHRHSCRRLLQ*VQLGSSSVRCP
Trigger: TGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 72 bp GGTTCTCCGCTATCTGCAGAAGGCTCTCCTTCCGGCTaGAGCCTCGGGTGGAGGGCCACGGCCCTGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GSPLSAEGSPSG*SLGWRATALSA
Trigger: CGCAGACAGGGCCGTGGCCCTCCACCCGAGGCTTCAGCCGGAAGGAGAGCCTTCTGCAGATAGCGGAGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GGCACAGCTGCCGTCGGCTGCTGCAATGAGTCCAGCTaGGGAGCTCTTCGGTTCGCTGCCCAAGCGGGGGAA +
Preference number: 6 (lower is better)
Translates to: GTAAVGCCNESS*GALRFAAQAGE
Trigger: TTCCCCCGCTTGGGCAGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp GTGGTGCTTCAGCCCGCTTGCTGCTCCTCCGACGTCTaGGCCCCCTCAGGAGCACCCCAGGAGAAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VVLQPACCSSDV*APSGAPQEKPP
Trigger: AGGAGGCTTCTCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 90 bp TGCAGCCCTGTGGTGCTTCAGCCCGCTTGCTGCTCCTCCGACGTCTaGGCCCCCTCAGGAGCACCCCAGGAGAAGCCTCCTGTACAGCAG +
Preference number: 6 (lower is better)
Translates to: CSPVVLQPACCSSDV*APSGAPQEKPPVQQ
Trigger: CTGCTGTACAGGAGGCTTCTCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 90 bp GTGGGCAGGAGGGTGCCCTGCGGGGCCGGGAAACTCCGCAGCTCCTaGGGCACAAACCTGGGTGAGACAGAGTCTGCTAGGAAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: VGRRVPCGAGKLRSS*GTNLGETESARKQR
Trigger: CCTCTGCTTCCTAGCAGACTCTGTCTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTTTCCCGGCCCCGCAGGGCACCCTCCTGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTTaGTGCTCCTCCGACGTCTTGGCCCCCTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SHSCSPVVLQPA*CSSDVLAPSGA
Trigger: TGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp TTCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTaGCTGCTCCTCCGACGTCTTGGCCCCCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: FSQLQPCGASAR*LLLRRLGPLRS
Trigger: GCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp AGGGTGCCCTGCGGGGCCGGGAAACTCCGCAGCTCCTaGGGCACAAACCTGGGTGAGACAGAGTCTGCTAGG +
Preference number: 6 (lower is better)
Translates to: RVPCGAGKLRSS*GTNLGETESAR
Trigger: CCTAGCAGACTCTGTCTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTTTCCCGGCCCCGCAGGGCACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 90 bp CCTCTTGGATTCTCACAGCTGCAGCCCTGTGGTGCTTCAGCCCGCTaGCTGCTCCTCCGACGTCTTGGCCCCCTCAGGAGCACCCCAGGA +
Preference number: 6 (lower is better)
Translates to: PLGFSQLQPCGASAR*LLLRRLGPLRSTPG
Trigger: TCCTGGGGTGCTCCTGAGGGGGCCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 72 bp AGAAGCGGAACAGCAGGAAGCGCAGCGAGCCGCCGGTaGCGAAGATTTCCTTGGCACGCACCGTGGCCGTGT +
Preference number: 6 (lower is better)
Translates to: RSGTAGSAASRR*RRFPWHAPWPC
Trigger: ACACGGCCACGGTGCGTGCCAAGGAAATCTTCGTCACCGGCGGCTCGCTGCGCTTCCTGCTGTTCCGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp GGGGCCTCTTGGATTCTCACAGCTGCAGCCCTGTGGTaGTTCAGCCCGCTTGCTGCTCCTCCGACGTCTTGG +
Preference number: 6 (lower is better)
Translates to: GASWILTAAALW*FSPLAAPPTSW
Trigger: CCAAGACGTCGGAGGAGCAGCAAGCGGGCTGAAGCACCACAGGGCTGCAGCTGTGAGAATCCAAGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp AGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTGCTaGAATGAGTCCAGCTGGGGAGCTCTTCGGTTCGCT +
Preference number: 6 (lower is better)
Translates to: RRLTTGTAAVGC*NESSWGALRFA
Trigger: AGCGAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TGGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGCTaGTGCAATGAGTCCAGCTGGGGAGCTCTTCGGTTC +
Preference number: 6 (lower is better)
Translates to: WRRLTTGTAAVG*CNESSWGALRF
Trigger: GAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TGCCCCAGTCCTGGATGCTCACGGGGTTTACTGTCCTaGCATGGAGAAGGCTCACCACCGGCACAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: CPSPGCSRGLLS*HGEGSPPAQLP
Trigger: CGGCAGCTGTGCCGGTGGTGAGCCTTCTCCATGGCAGGACAGTAAACCCCGTGAGCATCCAGGACTGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp GCTCTGCCCCGCTCAGGCACCCGTAGATGTCCGGGCTaGGCAGCACCTGCAGGTAGTTTTCGCTCATCACCT +
Preference number: 6 (lower is better)
Translates to: ALPRSGTRRCPG*AAPAGSFRSSP
Trigger: AGGTGATGAGCGAAAACTACCTGCAGGTGCTGCGCAGCCCGGACATCTACGGGTGCCTGAGCGGGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp CAGTCCTGGATGCTCACGGGGTTTACTGTCCTGCCATaGAGAAGGCTCACCACCGGCACAGCTGCCGTCGGC +
Preference number: 6 (lower is better)
Translates to: QSWMLTGFTVLP*RRLTTGTAAVG
Trigger: GCCGACGGCAGCTGTGCCGGTGGTGAGCCTTCTCCATGGCAGGACAGTAAACCCCGTGAGCATCCAGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp CGGACCTGTGGGGCTGAAGCAGGGGTGAGCGGGATATaGAAGAAATTGGTCCCGGCCACCGGCTGCACATGG +
Preference number: 6 (lower is better)
Translates to: RTCGAEAGVSGI*KKLVPATGCTW
Trigger: CCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCCATATCCCGCTCACCCCTGCTTCAGCCCCACAGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp CATCGTCATAGCAACAGAGGCCGCCGGAGTCTTCCTTaGGGCACACGTCAGCCACCACCAGGTACTGGCGGC +
Preference number: 6 (lower is better)
Translates to: HRHSNRGRRSLP*GTRQPPPGTGG
Trigger: GCCGCCAGTACCTGGTGGTGGCTGACGTGTGCCCCAAGGAAGACTCCGGCGGCCTCTGTTGCTATGACGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp AGGGCAGCGGCTGACAGCACCACCTTGCCGGTCAGCTaGATATCCAAATGCCAGTCCTGGGCCTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: RAAADSTTLPVS*ISKCQSWASAP
Trigger: AGGAGCAGAGGCCCAGGACTGGCATTTGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp TCACCAGGAGCAGGGCAGCGGCTGACAGCACCACCTTaGCGGTCAGCTGCATATCCAAATGCCAGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SPGAGQRLTAPP*RSAAYPNASPG
Trigger: CCCAGGACTGGCATTTGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCTGCTCCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp AGCGGGATATGGAAGAAATTGGTCCCGGCCACCGGCTaGACATGGGGCTCCCGGCTGCTTCTGCCTAAGCCA +
Preference number: 6 (lower is better)
Translates to: SGIWKKLVPATG*TWGSRLLLPKP
Trigger: TGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCCATATCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GGGGAGCTCTTCGGTTCGCTGCCCAAGCGGGGGAAATaGGGAGGGTCAGGGTTACTGCCAACAGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: GELFGSLPKRGK*GGSGLLPTAVL
Trigger: CAGAACAGCTGTTGGCAGTAACCCTGACCCTCCCCATTTCCCCCGCTTGGGCAGCGAACCGAAGAGCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp ATATGGAAGAAATTGGTCCCGGCCACCGGCTGCACATaGGGCTCCCGGCTGCTTCTGCCTAAGCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: IWKKLVPATGCT*GSRLLLPKPGR
Trigger: CCTGCCTGGCTTAGGCAGAAGCAGCCGGGAGCCCCATGTGCAGCCGGTGGCCGGGACCAATTTCTTCCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GGGCCGGGAAACTCCGCAGCTCCTTGGGCACAAACCTaGGTGAGACAGAGTCTGCTAGGAAGCAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: GPGNSAAPWAQT*VRQSLLGSRGC
Trigger: GCACCCTCTGCTTCCTAGCAGACTCTGTCTCACCCAGGTTTGTGCCCAAGGAGCTGCGGAGTTTCCCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CAA 72 bp GTCACCAGGAGCAGGGCAGCGGCTGACAGCACCACCTaGCCGGTCAGCTGCATATCCAAATGCCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VTRSRAAADSTT*PVSCISKCQSW
Trigger: CCAGGACTGGCATTTGGATATGCAGCTGACCGGCAAGGTGGTGCTGTCAGCCGCTGCCCTGCTCCTGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS CCA 72 bp GGACGCGGGCTATGGATGAGAAGGTATAGGAGGAGTTaGGGGCGCCCTCCTGCTGATGCAGGGTCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: GRGLWMRRYRRS*GRPPADAGSGQ
Trigger: TTGACCTGACCCTGCATCAGCAGGAGGGCGCCCCCAACTCCTCCTATACCTTCTCATCCATAGCCCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS GCA 72 bp AGCCGGGGCTCAACCCCCTCCGCCTTCTGTATGAAATaGTCCTCCATTCGGACGCGGGCTATGGATGAGAAG +
Preference number: 6 (lower is better)
Translates to: SRGSTPSAFCMK*SSIRTRAMDEK
Trigger: CTTCTCATCCATAGCCCGCGTCCGAATGGAGGAGCATTTCATACAGAAGGCGGAGGGGGTTGAGCCCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 72 bp TATGAAATGCTCCTCCATTCGGACGCGGGCTATGGATaGGAAGGTATAGGAGGAGTTGGGGGCGCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: YEMLLHSDAGYG*EGIGGVGGALL
Trigger: CAGGAGGGCGCCCCCAACTCCTCCTATACCTTCTCATCCATAGCCCGCGTCCGAATGGAGGAGCATTTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400664.3
CDS TCA 72 bp ATAGCAATTGCCCAGATCCAGGCGGACCTGTGGGGCTaGAGCAGGGGTGAGCGGGATATGGAAGAAATTGGT +
Preference number: 6 (lower is better)
Translates to: IAIAQIQADLWG*SRGERDMEEIG
Trigger: ACCAATTTCTTCCATATCCCGCTCACCCCTGCTTCAGCCCCACAGGTCCGCCTGGATCTGGGCAATTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400664.3