RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHDC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000124702

Ensembl transcript IDs: ENST00000244670.12, ENST00000326974.9, ENST00000332245.9

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTaGCAGATGGGCAGGGGCAGTGAAGATGACAGCAGGCTCAGGAGG +
Preference number: 1 (lower is better)
Translates to: PHGGIPSPGVKGAGG*QMGRGSEDDSRLRR
Trigger: CCTCCTGAGCCTGCTGTCATCTTCACTGCCCCTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR CCA 90 bp CTGAATTCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATaGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACA +
Preference number: 1 (lower is better)
Translates to: LNSQHREHLSPNNST*RYTKSRGQRSRWVT
Trigger: TGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGAATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR-3UTR CCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAGGTCAAAGGAGCAGGTaGGTGACAGATGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRGQRSR*VTDGQG
Trigger: CCCCTGCCCATCTGTCACCCACCTGCTCCTTTGACC...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR-3UTR CCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGCCCAACAACTCCACATaGAGGTATACCAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQPNNST*RYTKSR
Trigger: CCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGG...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR-3UTR TCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTACAGCTCCCCACTaGATTCACAGCACAGAGAAC +
Preference number: 2 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSATAPH*IHSTEN
Trigger: GTTCTCTGTGCTGTGAATTCAGTGGGGAGCTGTAGC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCTCATGCCAACAGCTaGAACTCCTTTCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: ELAELQSTATAQGRVGFISHANS*NSFQLP
Trigger: TGGGAGCTGAAAGGAGTTGCAGCTGTTGGCATGAGA...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
3UTR-3UTR CCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCCCCAACAACTCCACATaGAGGTATACCAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: ELAELQSTATAQGRVGFIPNNST*RYTKSR
Trigger: CCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGG...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
3UTR-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTTCTCATGCCAACAGCTaGAACTCCTTTCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSSHANS*NSFQLP
Trigger: TGGGAGCTGAAAGGAGTTGCAGCTGTTGGCATGAGA...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
3UTR CCA 72 bp CAGCACAGAGAACACCTCTCGCCCAACAACTCCACATaGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: QHREHLSPNNST*RYTKSRGQRSR
Trigger: CCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGCTGCCTCTGCTATCTaGCAGGCCGAGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQAASAI*QAEPGR
Trigger: CCGCCCCGGCTCGGCCTGGCAGATAGCAGAGGCAGC...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGCAGCATGGTTCACCCTaGGGGGCCCGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQQHGSP*GARPPG
Trigger: ACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTG...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGCGCGGGTCCTCGAGCTaGCTGCAGCCTAGAACCCGT +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQRGSSS*LQPRTR
Trigger: ACGGGTTCTAGGCTGCAGGCAGCTCGAGGACCCGCG...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGCCCGGCACGGCCTGCTaGCTCTGCTATCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQPGTAC*LCYLPG
Trigger: GCCTGGCAGATAGCAGAGGCAGCAGGCCGTGCCGGG...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGCAGCATGGTTCACCCTaGGGGGCCCGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQQHGSP*GARPPG
Trigger: ACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTG...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGCCCCTCAGGCAGCACTaGAGTCGGGGGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQPLRQH*SRGTVQ
Trigger: CTGGACTGTCCCCCGACTCCAGTGCTGCCTGAGGGG...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGCTGCCTCTGCTATCTaGCAGGCCGAGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIAASAI*QAEPGR
Trigger: CCGCCCCGGCTCGGCCTGGCAGATAGCAGAGGCAGC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGACGGCCTGCTGCCTCTaGTATCTGCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQTACCL*YLPGRA
Trigger: GGCTCGGCCTGGCAGATAGCAGAGGCAGCAGGCCGT...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGACAGCCACTGCAGCATaGTTCACCCTGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQTATAA*FTLRGP
Trigger: CGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGT...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGCCCCTCAGGCAGCACTaGAGTCGGGGGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQPLRQH*SRGTVQ
Trigger: CTGGACTGTCCCCCGACTCCAGTGCTGCCTGAGGGG...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGCTGCCTCTGCTATCTaGCAGGCCGAGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAAASAI*QAEPGR
Trigger: CCGCCCCGGCTCGGCCTGGCAGATAGCAGAGGCAGC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACACAATACAGCAGCACTaGCGCCGGCGGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDTIQQH*RRRGHG
Trigger: GCCATGTCCCCGCCGGCGCCAGTGCTGCTGTATTGT...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACTCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDSQHCG*VEVPPA
Trigger: CGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGA...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGCCCAGGAACTGTCCCTaGCACTCGGGGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQPRNCP*HSGCEP
Trigger: TGGTTCACACCCCGAGTGTCAGGGACAGTTCCTGGG...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326974.9
CDS-3UTR GCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGTCCTCGAGCTGCCTaGAGCCTAGAACCCGTTGCG +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDGPRAA*SLEPVA
Trigger: CGCAACGGGTTCTAGGCTGCAGGCAGCTCGAGGACC...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCACGCGGGTCCTCGAGCTaGCTGCAGCCTAGAACCCGT +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPRGSSS*LQPRTR
Trigger: ACGGGTTCTAGGCTGCAGGCAGCTCGAGGACCCGCG...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCCGCGGGTCCTCGAGCTaGCTGCAGCCTAGAACCCGT +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIRGSSS*LQPRTR
Trigger: ACGGGTTCTAGGCTGCAGGCAGCTCGAGGACCCGCG...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAACGGCCTGCTGCCTCTaGTATCTGCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPTACCL*YLPGRA
Trigger: GGCTCGGCCTGGCAGATAGCAGAGGCAGCAGGCCGT...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCCCGGCACGGCCTGCTaGCTCTGCTATCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSPGTAC*LCYLPG
Trigger: GCCTGGCAGATAGCAGAGGCAGCAGGCCGTGCCGGG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTCCCGGCACGGCCTGCTaGCTCTGCTATCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGPGTAC*LCYLPG
Trigger: GCCTGGCAGATAGCAGAGGCAGCAGGCCGTGCCGGG...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGGGCCCGCCCTCCAGGTaGACTGTCCACCGTAACATC +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVGPPSR*TVHRNI
Trigger: GATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCC...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCAGCATGGTTCACCCTaGGGGGCCCGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSQHGSP*GARPPG
Trigger: ACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGATGCCCGACAGCCACTaGAGCATGGTTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQMPDSH*SMVHPA
Trigger: CGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCAT...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACATGCCCGACAGCCACTaGAGCATGGTTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDMPDSH*SMVHPA
Trigger: CGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCAT...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGGAAGTCCCTCCAGCGTaGAGGGCTGCCCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQEVPPA*RAALCT
Trigger: TGTACAAAGGGCAGCCCTGCACGCTGGAGGGACTTC...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGACATCCCCTGGGCCACTaGTTACAGCAACATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRHPLGH*LQQHAP
Trigger: GGGGGCATGTTGCTGTAACCAGTGGCCCAGGGGATG...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGAGCTTGCCCACGGATaGCAGACTTCACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDELAHG*QTSPGA
Trigger: TGCCCCCGGTGAAGTCTGCCATCCGTGGGCAAGCTC...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACGGTCAAAGGAGCAGGTaGGTGACAGATGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDGQRSR*VTDGQG
Trigger: CCCCTGCCCATCTGTCACCCACCTGCTCCTTTGACC...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGCTGAAAGGAGGTGGATaGGGACAGAGCACCAAGGGG +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQLKGGG*GQSTKG
Trigger: CCCCTTGGTGCTCTGTCCCCATCCACCTCCTTTCAG...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGAGTCCATACGTTTCCTaGGGGACGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQSPYVS*GTRGLR
Trigger: CCTCAGCCCTCTCGTCCCTCAGGAAACGTATGGACT...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244670.12
CDS-3UTR TCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGGGACTGTGTCGTCGATaGGGACGGTTGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQGLCRR*GRLSVH
Trigger: ATGGACACTCAACCGTCCTCATCGACGACACAGTCC...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCACAGCCTAGAACCCGTTaGGCGCCAACCGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSQPRTR*APTDAL
Trigger: TAAGGCGTCGGTTGGCGCGCAACGGGTTCTAGGCTG...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGCAGCCTAGAACCCGTTaGGCGCCAACCGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVQPRTR*APTDAL
Trigger: TAAGGCGTCGGTTGGCGCGCAACGGGTTCTAGGCTG...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTACGGCCTGCTGCCTCTaGTATCTGCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSATACCL*YLPGRA
Trigger: GGCTCGGCCTGGCAGATAGCAGAGGCAGCAGGCCGT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGGCCCGCCCTCCAGGTaGACTGTCCACCGTAACATC +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIGPPSR*TVHRNI
Trigger: GATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGAGGGTGGGATTTATCTaGTGGTCCCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQRVGFI*WSPPPQ
Trigger: TTGGGGAGGTGGGGACCAGCAGATAAATCCCACCCT...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATCATCCCCTGGGCCACTaGTTACAGCAACATGCCCCC +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDHPLGH*LQQHAP
Trigger: GGGGGCATGTTGCTGTAACCAGTGGCCCAGGGGATG...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTACAGCCACTGCAGCATaGTTCACCCTGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGTATAA*FTLRGP
Trigger: CGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGT...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTACAGCCACTGCAGCATaGTTCACCCTGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSTATAA*FTLRGP
Trigger: CGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCCCCTCAGGCAGCACTaGAGTCGGGGGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSPLRQH*SRGTVQ
Trigger: CTGGACTGTCCCCCGACTCCAGTGCTGCCTGAGGGG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGCTTCCCAGCAGAACCTaGCTGGCCCTGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKLPSRT*LALGRA
Trigger: AGCTCTGCCCAGGGCCAGCCAGGTTCTGCTGGGAAG...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKSQHCG*VEVPPA
Trigger: CGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGA...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACGCAGTCGTAGCTAAGTaGCGGAGGCATTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDAVVAK*RRHFGT
Trigger: AGTCCCGAAATGCCTCCGGCACTTAGCTACGACTGC...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244670.12
CDS-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGGCCCGCCCTCCAGGTaGACTGTCCACCGTAACATC +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSGPPSR*TVHRNI
Trigger: GATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAAGGAGTATACCCGATaGCCGACAGCCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQKEYTR*PTATAA
Trigger: TGCTGCAGTGGCTGTCGGGCATCGGGTATACTCCTT...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGAGGCATAGAGCACATTaGAGGCCCCTTCGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQRHRAH*RPLRCH
Trigger: ATGACACCGAAGGGGCCTGCAATGTGCTCTATGCCT...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAAGGGTGGGATTTATCTaGTGGTCCCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRRVGFI*WSPPPQ
Trigger: TTGGGGAGGTGGGGACCAGCAGATAAATCCCACCCT...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGCACCGTAACATCCCCTaGGCCACTGGTTACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQHRNIP*ATGYSN
Trigger: GTTGCTGTAACCAGTGGCCCAGGGGATGTTACGGTG...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACCACCGTAACATCCCCTaGGCCACTGGTTACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDHRNIP*ATGYSN
Trigger: GTTGCTGTAACCAGTGGCCCAGGGGATGTTACGGTG...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGAGCTTGCCCACGGATaGCAGACTTCACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSELAHG*QTSPGA
Trigger: TGCCCCCGGTGAAGTCTGCCATCCGTGGGCAAGCTC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGAGCTTGCCCACGGATaGCAGACTTCACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAELAHG*QTSPGA
Trigger: TGCCCCCGGTGAAGTCTGCCATCCGTGGGCAAGCTC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAAGCATTGTGGCTGAGTaGAAGTCCCTCCAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRSIVAE*KSLQRA
Trigger: TGCACGCTGGAGGGACTTCCACTCAGCCACAATGCT...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTACAATACAGCAGCACTaGCGCCGGCGGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGTIQQH*RRRGHG
Trigger: GCCATGTCCCCGCCGGCGCCAGTGCTGCTGTATTGT...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGCCTTCCTCAGGAGATaGACTGGTACCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQAFLRR*TGTPKE
Trigger: CTCTTTGGGGGTACCAGTCCATCTCCTGAGGAAGGC...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCTTCCCAGCAGAACCTaGCTGGCCCTGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSALPSRT*LALGRA
Trigger: AGCTCTGCCCAGGGCCAGCCAGGTTCTGCTGGGAAG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAGTCGATGAGGACGGTTaGGTGTCCATAGCGCATGTA +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRVDEDG*VSIAHV
Trigger: TACATGCGCTATGGACACTCAACCGTCCTCATCGAC...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAGGACTGTGTCGTCGATaGGGACGGTTGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSGLCRR*GRLSVH
Trigger: ATGGACACTCAACCGTCCTCATCGACGACACAGTCC...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTTCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSASQHCG*VEVPPA
Trigger: CGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGA...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGCATTCAGCTCCCACCTaGTATCATGAGGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQHSAPT*YHEANR
Trigger: CCTGTTTGCCTCATGATATCAGGTGGGAGCTGAATG...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAAGACGATGGGGCGACTaGTATTGCTGTTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRRRWGD*YCCWWS
Trigger: TGACCACCAACAGCAATATCAGTCGCCCCATCGTCT...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGCTACAGCTCCCCACTaGATTCACAGCACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQATAPH*IHSTEN
Trigger: GTTCTCTGTGCTGTGAATTCAGTGGGGAGCTGTAGC...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCCCAGGAACTGTCCCTaGCACTCGGGGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAPRNCP*HSGCEP
Trigger: TGGTTCACACCCCGAGTGTCAGGGACAGTTCCTGGG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTCAGCCTAGAACCCGTTaGGCGCCAACCGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGQPRTR*APTDAL
Trigger: TAAGGCGTCGGTTGGCGCGCAACGGGTTCTAGGCTG...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTATGCCCGACAGCCACTaGAGCATGGTTCACCCTGCG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSMPDSH*SMVHPA
Trigger: CGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCAT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGGGTACCACAGGAGCTTaGCCACGGATGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKGTTGA*PRMADF
Trigger: GAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACC...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGTACCACAGGAGCTTaGCCACGGATGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPGTTGA*PRMADF
Trigger: GAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACC...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGGTACCACAGGAGCTTaGCCACGGATGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIGTTGA*PRMADF
Trigger: GAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGAAGTCCCTCCAGCGTaGAGGGCTGCCCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPEVPPA*RAALCT
Trigger: TGTACAAAGGGCAGCCCTGCACGCTGGAGGGACTTC...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTCATCCCCTGGGCCACTaGTTACAGCAACATGCCCCC +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGHPLGH*LQQHAP
Trigger: GGGGGCATGTTGCTGTAACCAGTGGCCCAGGGGATG...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGACTTCCCAGCATTGTaGCTGAGTGGAAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDDFPAL*LSGSPS
Trigger: GGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTC...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAGTGGGATTTATCTGCTaGTCCCCACCTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSVGFIC*SPPPQD
Trigger: GTCTTGGGGAGGTGGGGACCAGCAGATAAATCCCAC...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGTCCCACCTGATATCATaGGGCAAACAGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQSHLIS*GKQDWS
Trigger: AGACCAGTCCTGTTTGCCTCATGATATCAGGTGGGA...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGAGACGATGGGGCGACTaGTATTGCTGTTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVRRWGD*YCCWWS
Trigger: TGACCACCAACAGCAATATCAGTCGCCCCATCGTCT...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGAGGCATAGAGCACATTaGAGGCCCCTTCGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVRHRAH*RPLRCH
Trigger: ATGACACCGAAGGGGCCTGCAATGTGCTCTATGCCT...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTGAAGTCCCTCCAGCGTaGAGGGCTGCCCTTTGTACA +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGEVPPA*RAALCT
Trigger: TGTACAAAGGGCAGCCCTGCACGCTGGAGGGACTTC...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGCAGAGGTCATGGAAGTaGCGGTTCAGCCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQQRSWK*RFSLAL
Trigger: TAATGCAAGGCTGAACCGGCACTTCCATGACCTCTG...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACCAGAGGTCATGGAAGTaGCGGTTCAGCCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDQRSWK*RFSLAL
Trigger: TAATGCAAGGCTGAACCGGCACTTCCATGACCTCTG...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGGGCTCAGACACTGCTTaGTTCTCCCTTCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVGSDTA*FSLLPI
Trigger: AATGGGGAGAAGGGAGAAGCAAGCAGTGTCTGAGCC...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGTCTCATGCCAACAGCTaGAACTCCTTTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQSHANS*NSFQLP
Trigger: TGGGAGCTGAAAGGAGTTGCAGCTGTTGGCATGAGA...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCAGCATTGTGGCTGAGTaGAAGTCCCTCCAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFISIVAE*KSLQRA
Trigger: TGCACGCTGGAGGGACTTCCACTCAGCCACAATGCT...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGACTTCCCAGCATTGTaGCTGAGTGGAAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIDFPAL*LSGSPS
Trigger: GGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAATTGTTGGAATGGAATaGCCCAAAGCGGTCGGCACG +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSIVGME*PKAVGT
Trigger: CGTGCCGACCGCTTTGGGCCATTCCATTCCAACAAT...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGCCTTCCTCAGGAGATaGACTGGTACCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPAFLRR*TGTPKE
Trigger: CTCTTTGGGGGTACCAGTCCATCTCCTGAGGAAGGC...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGGTGGGATTTATCTGCTaGTCCCCACCTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKVGFIC*SPPPQD
Trigger: GTCTTGGGGAGGTGGGGACCAGCAGATAAATCCCAC...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGGACTGTGTCGTCGATaGGGACGGTTGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSGLCRR*GRLSVH
Trigger: ATGGACACTCAACCGTCCTCATCGACGACACAGTCC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGATGGTCTAGGTTATACTaGATCACGGCCAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRWSRLY*ITASLH
Trigger: GTGCAAACTGGCCGTGATTCAGTATAACCTAGACCA...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTAAGGAGTATACCCGATaGCCGACAGCCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAKEYTR*PTATAA
Trigger: TGCTGCAGTGGCTGTCGGGCATCGGGTATACTCCTT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGCTCAGACACTGCTTaGTTCTCCCTTCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPGSDTA*FSLLPI
Trigger: AATGGGGAGAAGGGAGAAGCAAGCAGTGTCTGAGCC...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTAGGGTGGGATTTATCTaGTGGTCCCCACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGRVGFI*WSPPPQ
Trigger: TTGGGGAGGTGGGGACCAGCAGATAAATCCCACCCT...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTAGCATTGTGGCTGAGTaGAAGTCCCTCCAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSASIVAE*KSLQRA
Trigger: TGCACGCTGGAGGGACTTCCACTCAGCCACAATGCT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCATTGTTGGAATGGAATaGCCCAAAGCGGTCGGCACG +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIIVGME*PKAVGT
Trigger: CGTGCCGACCGCTTTGGGCCATTCCATTCCAACAAT...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAGCCAAGCCTCAGTTCTaGTGTCAAAGACTCGAATGC +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSAKPQF*CQRLEC
Trigger: GCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGC...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATAACTTCCAGAGGTCATaGAAGTGCCGGTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDNFQRS*KCRFSL
Trigger: AAGGCTGAACCGGCACTTCCATGACCTCTGGAAGTT...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGCCTCAGGAGATGGACTaGTACCCCCAAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKPQEMD*YPQRGQ
Trigger: TTGTCCTCTTTGGGGGTACCAGTCCATCTCCTGAGG...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTGCCTTCCTCAGGAGATaGACTGGTACCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGAFLRR*TGTPKE
Trigger: CTCTTTGGGGGTACCAGTCCATCTCCTGAGGAAGGC...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCACCCAACAACTCCACATaGAGGTATACCAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSPNNST*RYTKSR
Trigger: CCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGG...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTGTGGGATTTATCTGCTaGTCCCCACCTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGVGFIC*SPPPQD
Trigger: GTCTTGGGGAGGTGGGGACCAGCAGATAAATCCCAC...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATCCAAAGACATACATGTaGCTTCCCAGCATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDPKTYM*LPSIVA
Trigger: AGCCACAATGCTGGGAAGTCACATGTATGTCTTTGG...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTAGACGATGGGGCGACTaGTATTGCTGTTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSARRWGD*YCCWWS
Trigger: TGACCACCAACAGCAATATCAGTCGCCCCATCGTCT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGCCAACGCAAGGACACTaGATTGAAAATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQPTQGH*IENVHI
Trigger: GATGTGCACATTTTCAATGCAGTGTCCTTGCGTTGG...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACCCAACGCAAGGACACTaGATTGAAAATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDPTQGH*IENVHI
Trigger: GATGTGCACATTTTCAATGCAGTGTCCTTGCGTTGG...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTAGGCATAGAGCACATTaGAGGCCCCTTCGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSARHRAH*RPLRCH
Trigger: ATGACACCGAAGGGGCCTGCAATGTGCTCTATGCCT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACGAGTCCATGTCATGGTaGTGGTATCTAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDESMSW*WYLACE
Trigger: TTCACAAGCTAGATACCAGCACCATGACATGGACTC...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCCAGAGGTCATGGAAGTaGCGGTTCAGCCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIQRSWK*RFSLAL
Trigger: TAATGCAAGGCTGAACCGGCACTTCCATGACCTCTG...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTATTGTTGGAATGGAATaGCCCAAAGCGGTCGGCACG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSIVGME*PKAVGT
Trigger: CGTGCCGACCGCTTTGGGCCATTCCATTCCAACAAT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSISLLE*NGPKRS
Trigger: CGACCGCTTTGGGCCATTCCATTCCAACAATGAGAT...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTCCTCAGGAGATGGACTaGTACCCCCAAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGPQEMD*YPQRGQ
Trigger: TTGTCCTCTTTGGGGGTACCAGTCCATCTCCTGAGG...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCCTCAGGAGATGGACTaGTACCCCCAAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAPQEMD*YPQRGQ
Trigger: TTGTCCTCTTTGGGGGTACCAGTCCATCTCCTGAGG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp TGCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGGCAAGGACACTGCATTaGAAATGTGCACATCTATCT +
Preference number: 4 (lower is better)
Translates to: CQQLQLLSAPSQGSRLKQARTLH*KCAHLS
Trigger: AGATAGATGTGCACATTTTCAATGCAGTGTCCTTGC...CTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGGTCTAGGTTATACTaGATCACGGCCAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIWSRLY*ITASLH
Trigger: GTGCAAACTGGCCGTGATTCAGTATAACCTAGACCA...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTTCCCACCTGATATCATaGGGCAAACAGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGSHLIS*GKQDWS
Trigger: AGACCAGTCCTGTTTGCCTCATGATATCAGGTGGGA...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTTCCCACCTGATATCATaGGGCAAACAGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSASHLIS*GKQDWS
Trigger: AGACCAGTCCTGTTTGCCTCATGATATCAGGTGGGA...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTCATTCAGCTCCCACCTaGTATCATGAGGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGHSAPT*YHEANR
Trigger: CCTGTTTGCCTCATGATATCAGGTGGGAGCTGAATG...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCATTCAGCTCCCACCTaGTATCATGAGGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSHSAPT*YHEANR
Trigger: CCTGTTTGCCTCATGATATCAGGTGGGAGCTGAATG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGACTCGAATGCGGTTaGAGTAAATCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDRLECG*SKSHCW
Trigger: CCAACAATGAGATTTACTGCAACCGCATTCGAGTCT...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATGGGCAGTGTCAAAGACTCGAATaGGGTTGCAGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: WRYTKSRGQRSRWVTDGQCQRLE*GCSKSH
Trigger: ATGAGATTTACTGCAACCGCATTCGAGTCTTTGACA...CTGCCCATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTTCTCATGCCAACAGCTaGAACTCCTTTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGSHANS*NSFQLP
Trigger: TGGGAGCTGAAAGGAGTTGCAGCTGTTGGCATGAGA...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAGCTTGTGAATGTCATTaGAAAAACAGTCCGCTGACG +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSACECH*KNSPLT
Trigger: CGTCAGCGGACTGTTTTTCCAATGACATTCACAAGC...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244670.12
CDS-3UTR CCA 90 bp CTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGTCCATGTCATGGTGCTaGTATCTAGCTTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: LAQQLHMEVYQVQGSKEQSMSWC*YLACEC
Trigger: ACATTCACAAGCTAGATACCAGCACCATGACATGGA...CTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKISLLE*NGPKRS
Trigger: CGACCGCTTTGGGCCATTCCATTCCAACAATGAGAT...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGCCAAGCCTCAGTTCTaGTGTCAAAGACTCGAATGC +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAAKPQF*CQRLEC
Trigger: GCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCCAAGCCTCAGTTCTaGTGTCAAAGACTCGAATGC +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSAKPQF*CQRLEC
Trigger: GCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTAACTTCCAGAGGTCATaGAAGTGCCGGTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGNFQRS*KCRFSL
Trigger: AAGGCTGAACCGGCACTTCCATGACCTCTGGAAGTT...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTAACTTCCAGAGGTCATaGAAGTGCCGGTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSNFQRS*KCRFSL
Trigger: AAGGCTGAACCGGCACTTCCATGACCTCTGGAAGTT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCCCAACAACTCCACATaGAGGTATACCAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAPNNST*RYTKSR
Trigger: CCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGGCAAGGACACTGCATTaGAAATGTGCACATCTATCT +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVARTLH*KCAHLS
Trigger: AGATAGATGTGCACATTTTCAATGCAGTGTCCTTGC...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCCAAAGACATACATGTaGCTTCCCAGCATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAPKTYM*LPSIVA
Trigger: AGCCACAATGCTGGGAAGTCACATGTATGTCTTTGG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTTGGTCTAGGTTATACTaGATCACGGCCAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGWSRLY*ITASLH
Trigger: GTGCAAACTGGCCGTGATTCAGTATAACCTAGACCA...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCCCAACGCAAGGACACTaGATTGAAAATGTGCACATC +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIPTQGH*IENVHI
Trigger: GATGTGCACATTTTCAATGCAGTGTCCTTGCGTTGG...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGAGTCCATGTCATGGTaGTGGTATCTAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPESMSW*WYLACE
Trigger: TTCACAAGCTAGATACCAGCACCATGACATGGACTC...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGATGTCAAAGACTCGAATaGGGTTGCAGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRCQRLE*GCSKSH
Trigger: ATGAGATTTACTGCAACCGCATTCGAGTCTTTGACA...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGTGCCGGTTCAGCCTTaGATTATAACCACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIVPVQP*IITTKD
Trigger: ATCTTTGGTGGTTATAATGCAAGGCTGAACCGGCAC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATTCCATGTCATGGTGCTaGTATCTAGCTTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDSMSWC*YLACEC
Trigger: ACATTCACAAGCTAGATACCAGCACCATGACATGGA...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTATCTCATTGTTGGAATaGAATGGCCCAAAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSISLLE*NGPKRS
Trigger: CGACCGCTTTGGGCCATTCCATTCCAACAATGAGAT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCGCAAGGACACTGCATTaGAAATGTGCACATCTATCT +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIARTLH*KCAHLS
Trigger: AGATAGATGTGCACATTTTCAATGCAGTGTCCTTGC...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGCTGGTATCTAGCTTGTaGATGTCATTGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVLVSSL*MSLEKQ
Trigger: CTGTTTTTCCAATGACATTCACAAGCTAGATACCAG...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGAGTCCATGTCATGGTaGTGGTATCTAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAESMSW*WYLACE
Trigger: TTCACAAGCTAGATACCAGCACCATGACATGGACTC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCAGACTCGAATGCGGTTaGAGTAAATCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: ELAELQSTATAQGRVGFIRLECG*SKSHCW
Trigger: CCAACAATGAGATTTACTGCAACCGCATTCGAGTCT...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGTGCCGGTTCAGCCTTaGATTATAACCACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSVPVQP*IITTKD
Trigger: ATCTTTGGTGGTTATAATGCAAGGCTGAACCGGCAC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGTGCCGGTTCAGCCTTaGATTATAACCACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAVPVQP*IITTKD
Trigger: ATCTTTGGTGGTTATAATGCAAGGCTGAACCGGCAC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAGTAAATCTCATTGTTaGAATGGAATGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSSKSHC*NGMAQS
Trigger: GCTTTGGGCCATTCCATTCCAACAATGAGATTTACT...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTTGTGAATGTCATTaGAAAAACAGTCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSACECH*KNSPPA
Trigger: AGCAGGCGGACTGTTTTTCCAATGACATTCACAAGC...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGCTTGTGAATGTCATTaGAAAAACAGTCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSAACECH*KNSPPA
Trigger: AGCAGGCGGACTGTTTTTCCAATGACATTCACAAGC...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTAGACTCGAATGCGGTTaGAGTAAATCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSARLECG*SKSHCW
Trigger: CCAACAATGAGATTTACTGCAACCGCATTCGAGTCT...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTTCCATGTCATGGTGCTaGTATCTAGCTTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSASMSWC*YLACEC
Trigger: ACATTCACAAGCTAGATACCAGCACCATGACATGGA...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAAGTAAATCTCATTGTTaGAATGGAATGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: STENTSRPTTPHGGIPSPSKSHC*NGMAQS
Trigger: GCTTTGGGCCATTCCATTCCAACAATGAGATTTACT...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR TCA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCTGGTATCTAGCTTGTaGATGTCATTGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSALVSSL*MSLEKQ
Trigger: CTGTTTTTCCAATGACATTCACAAGCTAGATACCAG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR TCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCTGGTATCTAGCTTGTaGATGTCATTGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSLVSSL*MSLEKQ
Trigger: CTGTTTTTCCAATGACATTCACAAGCTAGATACCAG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR GCA 90 bp CTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTGGTTGTCAAAGACTCGAATaGGGTTGCAGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: LNFRVQRQLKEGWDLSAGCQRLE*GCSKSH
Trigger: ATGAGATTTACTGCAACCGCATTCGAGTCTTTGACA...ACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CCA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTAGTAAATCTCATTGTTaGAATGGAATGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSSKSHC*NGMAQS
Trigger: GCTTTGGGCCATTCCATTCCAACAATGAGATTTACT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 90 bp ACAGCCACTGCAGCATGGTTCACCCTGCGGGGCCCGCCCTCCAGGTaGACTGTCCACCGTAACATCCCCTGGGCCACTGGTTACAGCAAC +
Preference number: 5 (lower is better)
Translates to: TATAAWFTLRGPPSR*TVHRNIPWATGYSN
Trigger: GTTGCTGTAACCAGTGGCCCAGGGGATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 90 bp AGGAGTATACCCGATGCCCGACAGCCACTGCAGCATGGTTCACCCTaGGGGGCCCGCCCTCCAGGTGCACTGTCCACCGTAACATCCCCT +
Preference number: 5 (lower is better)
Translates to: RSIPDARQPLQHGSP*GARPPGALSTVTSP
Trigger: AGGGGATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCATCGGGTATACTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp ATTGTAGCCAAAGGCCGAGTGGCTCCGGCGCCCCTCAGGCAGCACTaGAGTCGGGGGACAGTCCAGCCAAGCCTCAGTTCTGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: IVAKGRVAPAPLRQH*SRGTVQPSLSSGVK
Trigger: TTTGACACCAGAACTGAGGCTTGGCTGGACTGTCCCCCGACTCCAGTGCTGCCTGAGGGGCGCCGGAGCCACTCGGCCTTTGGCTACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp GGTCGGCACGGCCCCCAAAGACATACATGTGACTTCCCAGCATTGTaGCTGAGTGGAAGTCCCTCCAGCGTGCAGGGCTGCCCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GRHGPQRHTCDFPAL*LSGSPSSVQGCPLY
Trigger: GTACAAAGGGCAGCCCTGCACGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTCACATGTATGTCTTTGGGGGCCGTGCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 90 bp CTTCGGTGTCATTCCGCCCGCCCCAAAGGAGGACTGTGTCGTCGATaGGGACGGTTGAGTGTCCATAGCGCATGTAGGGTACCACAGGAG +
Preference number: 5 (lower is better)
Translates to: LRCHSARPKGGLCRR*GRLSVHSACRVPQE
Trigger: CTCCTGTGGTACCCTACATGCGCTATGGACACTCAACCGTCCTCATCGACGACACAGTCCTCCTTTGGGGCGGGCGGAATGACACCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 90 bp TGGAATGGCCCAAAGCGGTCGGCACGGCCCCCAAAGACATACATGTaGCTTCCCAGCATTGTGGCTGAGTGGAAGTCCCTCCAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: WNGPKRSARPPKTYM*LPSIVAEWKSLQRA
Trigger: TGCACGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTCACATGTATGTCTTTGGGGGCCGTGCCGACCGCTTTGGGCCATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp AGTGTCCATAGCGCATGTAGGGTACCACAGGAGCTTGCCCACGGATaGCAGACTTCACCGGGGGCAGCTTTGTCCAACGCAAGGACACTG +
Preference number: 5 (lower is better)
Translates to: SVHSACRVPQELAHG*QTSPGAALSNARTL
Trigger: CAGTGTCCTTGCGTTGGACAAAGCTGCCCCCGGTGAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCCTACATGCGCTATGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 90 bp GGCACGGCCCCCAAAGACATACATGTGACTTCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAGCGTGCAGGGCTGCCCTTTGTACAGAT +
Preference number: 5 (lower is better)
Translates to: GTAPKDIHVTSQHCG*VEVPPACRAALCTD
Trigger: ATCTGTACAAAGGGCAGCCCTGCACGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTCACATGTATGTCTTTGGGGGCCGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp ACAGCAGGCTCAGGAGGGGAGGTGGCAGAAACTTCCTCCTACCCATaGGAGGAGACGATGGGGCGACTGATATTGCTGTTGGTGGTCATG +
Preference number: 5 (lower is better)
Translates to: TAGSGGEVAETSSYP*EETMGRLILLLVVM
Trigger: CATGACCACCAACAGCAATATCAGTCGCCCCATCGTCTCCTCCCATGGGTAGGAGGAAGTTTCTGCCACCTCCCCTCCTGAGCCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCATCACCGGGGGCAGCTTaGTCCAACGCAAGGACACTG +
Preference number: 5 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSSPGAA*SNARTL
Trigger: CAGTGTCCTTGCGTTGGACAAAGCTGCCCCCGGTGA...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGGGGTACCACAGGAGCTaGCCCACGGATGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: NNSTWRYTKSRGQRSRWVGYHRS*PTDGRL
Trigger: AAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCC...CACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp TCACAGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGGGGTACCACAGGAGCTaGCCCACGGATGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: SQHREHLSPNNSTWRYTKGYHRS*PTDGRL
Trigger: AAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCC...CTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS CCA 90 bp CAGGCAGCACTGGAGTCGGGGGACAGTCCAGCCAAGCCTCAGTTCTaGTGTCAAAGACTCGAATGCGGTTGCAGTAAATCTCATTGTTGG +
Preference number: 5 (lower is better)
Translates to: QAALESGDSPAKPQF*CQRLECGCSKSHCW
Trigger: CCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGCTGGACTGTCCCCCGACTCCAGTGCTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTTCACCGGGGGCAGCTTaGTCCAACGCAAGGACACTG +
Preference number: 5 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSASPGAA*SNARTL
Trigger: CAGTGTCCTTGCGTTGGACAAAGCTGCCCCCGGTGA...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTTCACCGGGGGCAGCTTaGTCCAACGCAAGGACACTG +
Preference number: 5 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSSPGAA*SNARTL
Trigger: CAGTGTCCTTGCGTTGGACAAAGCTGCCCCCGGTGA...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp CAACTCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACATGGGGCGACTGATATaGCTGTTGGTGGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: QLHMEVYQVQGSKEQVGDMGRLI*LLVVMA
Trigger: TGCCATGACCACCAACAGCAATATCAGTCGCCCCAT...GTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATCGGGGTGTGAACCACTaGTGCGTATTGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDRGVNH*CVLTSK
Trigger: CTTTGACGTCAATACGCACAAGTGGTTCACACCCCG...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326974.9
CDS-3UTR CAA 90 bp GCCAACAGCTGCAACTCCTTTCAGCTCCCAGTCAAGGCTCAAGGCTCAAGCAGAAGTGCCGGTTCAGCCTaGCATTATAACCACCAAAGA +
Preference number: 5 (lower is better)
Translates to: ANSCNSFQLPVKAQGSSRSAGSA*HYNHQR
Trigger: TCTTTGGTGGTTATAATGCAAGGCTGAACCGGCACT...TCTGCTTGAGCCTTGAGCCTTGACTGGGAGCTGAAAGGAGTTGCAGCTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAGGGGTCACGACTGATATTGCTGTaGGTGGTCATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: RTPLAQQLHMEVYQVQGSRLILL*VVMAFS
Trigger: GCTGAATGCCATGACCACCAACAGCAATATCAGTCG...TGACCCCTGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCAATGGGGCGACTGATATaGCTGTTGGTGGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: STENTSRPTTPHGGIPSPMGRLI*LLVVMA
Trigger: TGCCATGACCACCAACAGCAATATCAGTCGCCCCAT...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCATGGGGCGACTGATATaGCTGTTGGTGGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: ELAELQSTATAQGRVGFIMGRLI*LLVVMA
Trigger: TGCCATGACCACCAACAGCAATATCAGTCGCCCCAT...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 90 bp AGTCCAGCCAAGCCTCAGTTCTGGTGTCAAAGACTCGAATGCGGTTaGAGTAAATCTCATTGTTGGAATGGAATGGCCCAAAGCGGTCGG +
Preference number: 5 (lower is better)
Translates to: SPAKPQFWCQRLECG*SKSHCWNGMAQSGR
Trigger: CCGACCGCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGCTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 90 bp GGGGACAGTCCAGCCAAGCCTCAGTTCTGGTGTCAAAGACTCGAATaGGGTTGCAGTAAATCTCATTGTTGGAATGGAATGGCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: GDSPAKPQFWCQRLE*GCSKSHCWNGMAQS
Trigger: GCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGCTGGACTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp TTCTGGTGTCAAAGACTCGAATGCGGTTGCAGTAAATCTCATTGTTaGAATGGAATGGCCCAAAGCGGTCGGCACGGCCCCCAAAGACAT +
Preference number: 5 (lower is better)
Translates to: FWCQRLECGCSKSHC*NGMAQSGRHGPQRH
Trigger: ATGTCTTTGGGGGCCGTGCCGACCGCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATAGTGCCGGTTCAGCCTaGCATTATAACCACCAAAGA +
Preference number: 5 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDSAGSA*HYNHQR
Trigger: TCTTTGGTGGTTATAATGCAAGGCTGAACCGGCACT...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AGCACAGAGAACACCTCTCGCCCAACAACTCCACATGGAGGTATACCAAGTCCACGACTGATATTGCTGTaGGTGGTCATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: STENTSRPTTPHGGIPSPRLILL*VVMAFS
Trigger: GCTGAATGCCATGACCACCAACAGCAATATCAGTCG...TGGACTTGGTATACCTCCATGTGGAGTTGTTGGGCGAGAGGTGTTCTCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp TGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTGCTCGGGGTGTGAACCACTaGTGCGTATTGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: WLNFRVQRQLKEGWDLSARGVNH*CVLTSK
Trigger: CTTTGACGTCAATACGCACAAGTGGTTCACACCCCG...AGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS CCA 90 bp AAAGACTCGAATGCGGTTGCAGTAAATCTCATTGTTGGAATGGAATaGCCCAAAGCGGTCGGCACGGCCCCCAAAGACATACATGTGACT +
Preference number: 5 (lower is better)
Translates to: KDSNAVAVNLIVGME*PKAVGTAPKDIHVT
Trigger: AGTCACATGTATGTCTTTGGGGGCCGTGCCGACCGCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATCCAAAGAGGACAATCTaGTCACCAACAATACAGCAG +
Preference number: 5 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDPKRTI*SPTIQQ
Trigger: CTGCTGTATTGTTGGTGACAAGATTGTCCTCTTTGG...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS-3UTR CAA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCGACTGATATTGCTGTaGGTGGTCATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSRLILL*VVMAFS
Trigger: GCTGAATGCCATGACCACCAACAGCAATATCAGTCG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTAGTGCCGGTTCAGCCTaGCATTATAACCACCAAAGA +
Preference number: 5 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSSAGSA*HYNHQR
Trigger: TCTTTGGTGGTTATAATGCAAGGCTGAACCGGCACT...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCCCAAAGAGGACAATCTaGTCACCAACAATACAGCAG +
Preference number: 5 (lower is better)
Translates to: ELAELQSTATAQGRVGFIPKRTI*SPTIQQ
Trigger: CTGCTGTATTGTTGGTGACAAGATTGTCCTCTTTGG...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp TCCACATGGAGGTATACCAAGTCCAGGGGTCAAAGGAGCAGGTGGGTGACAGATAAAATGTACATGATCTaGCCTAGGACACAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: STWRYTKSRGQRSRWVTDKMYMI*PRTQAE
Trigger: TTCAGCCTGTGTCCTAGGCAAGATCATGTACATTTT...ATCTGTCACCCACCTGCTCCTTTGACCCCTGGACTTGGTATACCTCCATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326974.9
CDS-3UTR CAA 90 bp AGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCTCCAAAGAGGACAATCTaGTCACCAACAATACAGCAG +
Preference number: 5 (lower is better)
Translates to: SWLNFRVQRQLKEGWDLSPKRTI*SPTIQQ
Trigger: CTGCTGTATTGTTGGTGACAAGATTGTCCTCTTTGG...AGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS-3UTR CAA 90 bp GAGCTGGCTGAACTTCAGAGTACAGCGACAGCTCAAGGAAGGGTGGGATTTATCAAAATGTACATGATCTaGCCTAGGACACAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: ELAELQSTATAQGRVGFIKMYMI*PRTQAE
Trigger: TTCAGCCTGTGTCCTAGGCAAGATCATGTACATTTT...GATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTCTGAAGTTCAGCCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS GCA 90 bp CACAGGATTAAACTTCCAGAGGTCATGGAAGTGCCGGTTCAGCCTTaGATTATAACCACCAAAGATGTACAGCTCCCCATTGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: HRIKLPEVMEVPVQP*IITTKDVQLPIVAK
Trigger: TTTGGCTACAATGGGGAGCTGTACATCTTTGGTGGTTATAATGCAAGGCTGAACCGGCACTTCCATGACCTCTGGAAGTTTAATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 90 bp AGAGTCTTCAGACTAGGGCTAAAGTCCAAAATGTGTAAGTCAGAATaGTCTATAAGGTCAAATTCATCTCCCAGGCCTTCCTCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RVFRLGLKSKMCKSE*SIRSNSSPRPSSGD
Trigger: ATCTCCTGAGGAAGGCCTGGGAGATGAATTTGACCTTATAGATCATTCTGACTTACACATTTTGGACTTTAGCCCTAGTCTGAAGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp CCCGATGCCCGACAGCCACTGCAGCATGGTTCACCCTaGGGGGCCCGCCCTCCAGGTGCACTGTCCACCGTA +
Preference number: 6 (lower is better)
Translates to: PDARQPLQHGSP*GARPPGALSTV
Trigger: TACGGTGGACAGTGCACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCATCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp GCAGCATGGTTCACCCTGCGGGGCCCGCCCTCCAGGTaGACTGTCCACCGTAACATCCCCTGGGCCACTGGT +
Preference number: 6 (lower is better)
Translates to: AAWFTLRGPPSR*TVHRNIPWATG
Trigger: ACCAGTGGCCCAGGGGATGTTACGGTGGACAGTGCACCTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp ACCCCCGAAGGAGTATACCCGATGCCCGACAGCCACTaGAGCATGGTTCACCCTGCGGGGCCCGCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TPEGVYPMPDSH*SMVHPAGPALQ
Trigger: CTGGAGGGCGGGCCCCGCAGGGTGAACCATGCTGCAGTGGCTGTCGGGCATCGGGTATACTCCTTCGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 72 bp AAAGGCCGAGTGGCTCCGGCGCCCCTCAGGCAGCACTaGAGTCGGGGGACAGTCCAGCCAAGCCTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: KGRVAPAPLRQH*SRGTVQPSLSS
Trigger: AGAACTGAGGCTTGGCTGGACTGTCCCCCGACTCCAGTGCTGCCTGAGGGGCGCCGGAGCCACTCGGCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp CGCGGGTCCTCGAGCTGCCTGCAGCCTAGAACCCGTTaGGCGCCAACCGACGCCTTAGTCCCCAACGAGATA +
Preference number: 6 (lower is better)
Translates to: RGSSSCLQPRTR*APTDALVPNEI
Trigger: TATCTCGTTGGGGACTAAGGCGTCGGTTGGCGCGCAACGGGTTCTAGGCTGCAGGCAGCTCGAGGACCCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS CCA 72 bp AGCGCATGTAGGGTACCACAGGAGCTTGCCCACGGATaGCAGACTTCACCGGGGGCAGCTTTGTCCAACGCA +
Preference number: 6 (lower is better)
Translates to: SACRVPQELAHG*QTSPGAALSNA
Trigger: TGCGTTGGACAAAGCTGCCCCCGGTGAAGTCTGCCATCCGTGGGCAAGCTCCTGTGGTACCCTACATGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 72 bp GGCCCCCAAAGACATACATGTGACTTCCCAGCATTGTaGCTGAGTGGAAGTCCCTCCAGCGTGCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GPQRHTCDFPAL*LSGSPSSVQGC
Trigger: GCAGCCCTGCACGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTCACATGTATGTCTTTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CAA 90 bp AGGCCTTCCTCAGGAGATGGACTGGTACCCCCAAAGAGGACAATCTaGTCACCAACAATACAGCAGCACTGGCGCCGGCGGGGACATGGC +
Preference number: 6 (lower is better)
Translates to: RPSSGDGLVPPKRTI*SPTIQQHWRRRGHG
Trigger: GCCATGTCCCCGCCGGCGCCAGTGCTGCTGTATTGTTGGTGACAAGATTGTCCTCTTTGGGGGTACCAGTCCATCTCCTGAGGAAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 72 bp CATTCCGCCCGCCCCAAAGGAGGACTGTGTCGTCGATaGGGACGGTTGAGTGTCCATAGCGCATGTAGGGTA +
Preference number: 6 (lower is better)
Translates to: HSARPKGGLCRR*GRLSVHSACRV
Trigger: TACCCTACATGCGCTATGGACACTCAACCGTCCTCATCGACGACACAGTCCTCCTTTGGGGCGGGCGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 72 bp CCCAAAGACATACATGTGACTTCCCAGCATTGTGGCTaGGTGGAAGTCCCTCCAGCGTGCAGGGCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: PKDIHVTSQHCG*VEVPPACRAAL
Trigger: AAGGGCAGCCCTGCACGCTGGAGGGACTTCCACTCAGCCACAATGCTGGGAAGTCACATGTATGTCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 72 bp CTTCCTCCTACCCATGGGAGGAGACGATGGGGCGACTaGTATTGCTGTTGGTGGTCATGGCATTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LPPTHGRRRWGD*YCCWWSWHSAP
Trigger: GGGAGCTGAATGCCATGACCACCAACAGCAATATCAGTCGCCCCATCGTCTCCTCCCATGGGTAGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS CAA 72 bp TCAGGAGATGGACTGGTACCCCCAAAGAGGACAATCTaGTCACCAACAATACAGCAGCACTGGCGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: SGDGLVPPKRTI*SPTIQQHWRRR
Trigger: CCGCCGGCGCCAGTGCTGCTGTATTGTTGGTGACAAGATTGTCCTCTTTGGGGGTACCAGTCCATCTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CAA 72 bp TCCTACCCATGGGAGGAGACGATGGGGCGACTGATATaGCTGTTGGTGGTCATGGCATTCAGCTCCCACCTG +
Preference number: 6 (lower is better)
Translates to: SYPWEETMGRLI*LLVVMAFSSHL
Trigger: CAGGTGGGAGCTGAATGCCATGACCACCAACAGCAATATCAGTCGCCCCATCGTCTCCTCCCATGGGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS CCA 72 bp CAAAGACTCGAATGCGGTTGCAGTAAATCTCATTGTTaGAATGGAATGGCCCAAAGCGGTCGGCACGGCCCC +
Preference number: 6 (lower is better)
Translates to: QRLECGCSKSHC*NGMAQSGRHGP
Trigger: GGGGCCGTGCCGACCGCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 72 bp CTGGAGTCGGGGGACAGTCCAGCCAAGCCTCAGTTCTaGTGTCAAAGACTCGAATGCGGTTGCAGTAAATCT +
Preference number: 6 (lower is better)
Translates to: LESGDSPAKPQF*CQRLECGCSKS
Trigger: AGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGCTGGACTGTCCCCCGACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CAA 72 bp CCATGGGAGGAGACGATGGGGCGACTGATATTGCTGTaGGTGGTCATGGCATTCAGCTCCCACCTGATATCA +
Preference number: 6 (lower is better)
Translates to: PWEETMGRLILL*VVMAFSSHLIS
Trigger: TGATATCAGGTGGGAGCTGAATGCCATGACCACCAACAGCAATATCAGTCGCCCCATCGTCTCCTCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244670.12
ENST00000326974.9
CDS CAA 72 bp AAGGGGGAGGAGACGATGGGGCGACTGATATTGCTGTaGGTGGTCATGGCATTCAGCTCCCACCTGATATCA +
Preference number: 6 (lower is better)
Translates to: KGEETMGRLILL*VVMAFSSHLIS
Trigger: TGATATCAGGTGGGAGCTGAATGCCATGACCACCAACAGCAATATCAGTCGCCCCATCGTCTCCTCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332245.9
CDS CCA 72 bp AATGCGGTTGCAGTAAATCTCATTGTTGGAATGGAATaGCCCAAAGCGGTCGGCACGGCCCCCAAAGACATA +
Preference number: 6 (lower is better)
Translates to: NAVAVNLIVGME*PKAVGTAPKDI
Trigger: TATGTCTTTGGGGGCCGTGCCGACCGCTTTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS CCA 72 bp ATGTCATGGTGCTGGTATCTAGCTTGTGAATGTCATTaGAAAAACAGTCCGCCTGCTGCTCGTAGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: MSWCWYLACECH*KNSPPAARSPQ
Trigger: TTGGGGGCTACGAGCAGCAGGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCAGCACCATGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS TCA 72 bp ATAAGAGTCCATGTCATGGTGCTGGTATCTAGCTTGTaGATGTCATTGGAAAAACAGTCCGCCTGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: IRVHVMVLVSSL*MSLEKQSACCS
Trigger: CGAGCAGCAGGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCAGCACCATGACATGGACTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp CCAGCCAAGCCTCAGTTCTGGTGTCAAAGACTCGAATaGGGTTGCAGTAAATCTCATTGTTGGAATGGAATG +
Preference number: 6 (lower is better)
Translates to: PAKPQFWCQRLE*GCSKSHCWNGM
Trigger: CATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp AAACTTCCAGAGGTCATGGAAGTGCCGGTTCAGCCTTaGATTATAACCACCAAAGATGTACAGCTCCCCATT +
Preference number: 6 (lower is better)
Translates to: KLPEVMEVPVQP*IITTKDVQLPI
Trigger: AATGGGGAGCTGTACATCTTTGGTGGTTATAATGCAAGGCTGAACCGGCACTTCCATGACCTCTGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS GCA 72 bp AAGCCTCAGTTCTGGTGTCAAAGACTCGAATGCGGTTaGAGTAAATCTCATTGTTGGAATGGAATGGCCCAA +
Preference number: 6 (lower is better)
Translates to: KPQFWCQRLECG*SKSHCWNGMAQ
Trigger: TTGGGCCATTCCATTCCAACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACACCAGAACTGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244670.12
ENST00000326974.9
ENST00000332245.9
CDS TCA 72 bp ATAAGAGTCCATGTCATGGTGCTGGTATCTAGCTTGTaGATGTCATTGGAAAAACAGTCCGCTGACGTCAAA +
Preference number: 6 (lower is better)
Translates to: IRVHVMVLVSSL*MSLEKQSADVK
Trigger: TTTGACGTCAGCGGACTGTTTTTCCAATGACATTCACAAGCTAGATACCAGCACCATGACATGGACTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244670.12