RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165516

Ensembl transcript IDs: ENST00000298307.10, ENST00000553538.5, ENST00000553579.1, ENST00000553703.1, ENST00000554589.5, ENST00000555443.5, ENST00000555739.5, ENST00000556559.5, ENST00000557063.5, ENST00000557247.1

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACCTGCCTGTATTCAGCATGACCACTTGCTCCAGCCCCTACACTaGAGCATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCAC +
Preference number: 1 (lower is better)
Translates to: APACIQHDHLLQPLH*SIKVKVLNSCWSLH
Trigger: GTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAATGCTTCAGTGTAGGGGCTGGAGCAAGTGGTCATGCTGAATACAGGCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR CCA 90 bp GTATTTCATTACTGTGTGCAGCTCTGTGATGGACAAGCAAGTTGTTaGCACATCCACCAAAAACAATTACTTCTCCTTCATCGCTGGCAC +
Preference number: 1 (lower is better)
Translates to: VFHYCVQLCDGQASC*HIHQKQLLLLHRWH
Trigger: GTGCCAGCGATGAAGGAGAAGTAATTGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCACACAGTAATGAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555443.5
3UTR TCA 90 bp GCAAACTACAACAATGCATATAATTATACAAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATT +
Preference number: 1 (lower is better)
Translates to: ANYNNAYNYTNDATL*CLQDCCPCKVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTATATGCATTGTTGTAGTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR GCA 90 bp GGACACAGATTTATCAAGAAACATTCCTGGCAAAGTGAAAGTGTCTaGACCCAATCTTCTGAACGTAAAAAGGAAATAGCTGAAATGAAA +
Preference number: 1 (lower is better)
Translates to: GHRFIKKHSWQSESV*TQSSERKKEIAEMK
Trigger: TTTCATTTCAGCTATTTCCTTTTTACGTTCAGAAGATTGGGTGCAGACACTTTCACTTTGCCAGGAATGTTTCTTGATAAATCTGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCAGTCTTCCGAGTAGCTaGGACTACAGGCACCCACTA +
Preference number: 2 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGSLPSS*DYRHPL
Trigger: TAGTGGGTGCCTGTAGTCCCAGCTACTCGGAAGACT...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATTGCCTGTATTCAGCATaGCCACTTGCTCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHCLYSA*PLAPAP
Trigger: AGGGGCTGGAGCAAGTGGTCATGCTGAATACAGGCA...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCGTGAACCACTGCTCCTaGGCCTTCTTTCTCTTAAAT +
Preference number: 2 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGVNHCS*AFFLLN
Trigger: ATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCCCCCTTACACCACCATaGCAAACTACAAGTAAGTTA +
Preference number: 2 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGPLTPP*QTTSKL
Trigger: TAACTTACTTGTAGTTTGTCATGGTGGTGTAAGGGG...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR GCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 2 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGSRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATTTAGGAAAACCTATTTaGTTCTTTGACAGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHLGKPI*FFDRPA
Trigger: GGCTGGCCTGTCAAAGAATCAAATAGGTTTTCCTAA...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 2 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 2 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR GCA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 2 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR TCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 2 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGAAGCTTAGCAGCTCTGTaGTGGACAAGCAAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRSLAAL*WTSKLL
Trigger: CAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCT...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
3UTR-3UTR GCA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTAGATGTACTACTGTTTaGCATTCCAATATGTGCCCC +
Preference number: 2 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRIRCTTV*HSNMCP
Trigger: GGGGCACATATTGGAATGGCAAACAGTAGTACATCT...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR GCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTACTGGTGTTAGTGAGTaGCAAGATCGACCAACTGGG +
Preference number: 2 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSTGVSE*QDRPTG
Trigger: CCCAGTTGGTCGATCTTGGCACTCACTAACACCAGT...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR GCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 2 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR CCA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTATCAAGAAACATTCCTaGCAAAGTGAAAGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRIIKKHS*QSESVC
Trigger: GCAGACACTTTCACTTTGCCAGGAATGTTTCTTGAT...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCCAAGATCGACCAACTaGGCATATGCCTTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSPRSTN*AYALWN
Trigger: ATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR TCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 2 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR GCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 2 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR CCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTTGGTCTTCAACTCTTTaGAACTATGAAGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFWSSTL*NYEAEF
Trigger: AAACTCTGCTTCATAGTTCCAAAGAGTTGAAGACCA...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR TCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 2 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
3UTR-3UTR GCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTCTGGCACAAGCTGTGTaGCATAACCTTGGTTTTTCG +
Preference number: 2 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGLAQAV*HNLGFS
Trigger: CGAAAAACCAAGGTTATGGCACACAGCTTGTGCCAG...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555443.5
3UTR-3UTR GCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGACCAACTGGGCATATaGCTTGTGGAATTAATTCAT +
Preference number: 2 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHADQLGI*LVELIH
Trigger: ATGAATTAATTCCACAAGGCATATGCCCAGTTGGTC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR TCA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTTCCATTCATTTTTACTaGTGCAGTAAGTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPSIHFY*CSKSRH
Trigger: ATGCCTGGACTTACTGCATCAGTAAAAATGAATGGA...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR TCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTTCCATTCATTTTTACTaGTGCAGTAAGTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGSIHFY*CSKSRH
Trigger: ATGCCTGGACTTACTGCATCAGTAAAAATGAATGGA...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR GCA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTTATTTCATTACTGTGTaGAGCTCTGTGATGGACAAG +
Preference number: 2 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPYFITV*SSVMDK
Trigger: CTTGTCCATCACAGAGCTGCACACAGTAATGAAATA...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555443.5
3UTR TCA 72 bp GGTCTCTGTCACCCAGGCTGGTGTCACCCAGTGCAGTaGCAGGATCATGGCTCTCCACAACGTCTACCTCCT +
Preference number: 3 (lower is better)
Translates to: GLCHPGWCHPVQ*QDHGSPQRLPP
Trigger: AGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGACACCAGCCTGGGTGACAGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CAA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCAACCTATTTGATTCTTaGACAGGCCAGCCACATCCT +
Preference number: 3 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGNLFDS*TGQPHP
Trigger: AGGATGTGGCTGGCCTGTCAAAGAATCAAATAGGTT...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CAA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATTGGTGTTTCTCCATGTaGCTTAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHWCFSM*LRLVLN
Trigger: GTTCAAGACCAGCCTAAGCAACATGGAGAAACACCA...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
3UTR-3UTR CAA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 3 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR CAA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 3 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR CAA 90 bp TATTTCATTACTGTGTGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCCGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 3 (lower is better)
Translates to: YFITVCSSVMDKQVVGTSVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...GGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCACACAGTAATGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555443.5
3UTR GCA 72 bp GTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATaGCTTGTGGAATTAATTCATTCCACTCCCATGTAT +
Preference number: 3 (lower is better)
Translates to: VLVSAKIDQLGI*LVELIHSTPMY
Trigger: ATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
3UTR-3UTR CAA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 3 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR-3UTR CAA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATGGACAAGCAAGTTGTaGGCACATCCACCAAAAACA +
Preference number: 3 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAWTSKL*AHPPKT
Trigger: TGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000557247.1
3UTR TCA 72 bp AACAATGCATATAATTATACAAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGTCCATGCAAGGTGATC +
Preference number: 3 (lower is better)
Translates to: NNAYNYTNDATL*CLQDCCPCKVI
Trigger: GATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTATATGCATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
3UTR GCA 72 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATaGACATTAAAACCAACAGGTGCAAACTACAACAAT +
Preference number: 3 (lower is better)
Translates to: FRHKNRFSRPFT*TLKPTGANYNN
Trigger: ATTGTTGTAGTTTGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTGTGGCGCCCGTCGCTaGCGGCTACGTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGCGARR*RLRGRC
Trigger: GCAGCGGCCACGTAGCCGTCAGCGACGGGCGCCACA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCCGGGACTCGGGGCACTaGAGGGAAGCGGTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGRDSGH*REAVRV
Trigger: GACGCGGACCGCTTCCCTGCAGTGCCCCGAGTCCCG...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCGGCCTCTCTGCCGCCTaGGCTCGCGTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGGLSAA*ARVSQP
Trigger: AGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCC...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATCGGCTACGTGGCCGCTaGGCTCAGCGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHRLRGR*AQRGRQ
Trigger: TTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCG...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTGCCTGTATTCAGCATaGCCACTTGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGCLYSA*PLAPAP
Trigger: AGGGGCTGGAGCAAGTGGTCATGCTGAATACAGGCA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCCTGTGTGCAGCTCTGTaGTGGACAAGCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGLCAAL*WTSKLL
Trigger: CAACAACTTGCTTGTCCATCACAGAGCTGCACACAG...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTC +
Preference number: 4 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICALRPL*RLRSRF
Trigger: GAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGC...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp TATTTCATTACTGTGTGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCCCGGCTACGTGGCCGCTaGGCTCAGCGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: YFITVCSSVMDKQVVGTSRLRGR*AQRGRQ
Trigger: TTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCG...GGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCACACAGTAATGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTC +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHALRPL*RLRSRF
Trigger: GAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGC...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTGCCATTCCAATATGTaGCCCTTACACCACCATGAC +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGCHSNM*PLHHHD
Trigger: GTCATGGTGGTGTAAGGGGCACATATTGGAATGGCA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCCGGGACTCGGGGCACTaGAGGGAAGCGGTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSRDSGH*REAVRV
Trigger: GACGCGGACCGCTTCCCTGCAGTGCCCCGAGTCCCG...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGCGGGACTCGGGGCACTaGAGGGAAGCGGTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKRDSGH*REAVRV
Trigger: GACGCGGACCGCTTCCCTGCAGTGCCCCGAGTCCCG...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGACGGGACTCGGGGCACTaGAGGGAAGCGGTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRRDSGH*REAVRV
Trigger: GACGCGGACCGCTTCCCTGCAGTGCCCCGAGTCCCG...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCCGGCTACGTGGCCGCTaGGCTCAGCGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSRLRGR*AQRGRQ
Trigger: TTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCG...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCGGGCCGGCTCCCTATTaGAGCCCGTCTGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAGPAPY*SPSAPP
Trigger: AGGCGGGGCAGACGGGCTGCAATAGGGAGCCGGCCC...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555739.5
CDS-3UTR CCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCATCGCTGACGGCTACGTaGCCGCTGCGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGASLTAT*PLRSAG
Trigger: CCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGA...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGTCGCTGACGGCTACGTaGCCGCTGCGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKSLTAT*PLRSAG
Trigger: CCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGA...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCGCTGACGGCTACGTaGCCGCTGCGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRSLTAT*PLRSAG
Trigger: CCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGA...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGIGIAS*MVSSKQ
Trigger: TTGTTTGGAGGACACCATTCAAGAGGCAATACCAAT...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCGGCCTCTCTGCCGCCTaGGCTCGCGTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSGLSAA*ARVSQP
Trigger: AGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCC...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCGGCTACGTGGCCGCTaGGCTCAGCGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSRLRGR*AQRGRQ
Trigger: TTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATTCTATTTCCGACAGTTaGACAGGCATGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHSISDS*TGMGST
Trigger: CGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGA...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATAGTCTTCCGAGTAGCTaGGACTACAGGCACCCACTA +
Preference number: 4 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHSLPSS*DYRHPL
Trigger: TAGTGGGTGCCTGTAGTCCCAGCTACTCGGAAGACT...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGGCCTCTCTGCCGCCTaGGCTCGCGTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGGLSAA*ARVSQP
Trigger: AGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCC...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGGGCCTCTCTGCCGCCTaGGCTCGCGTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLGLSAA*ARVSQP
Trigger: AGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCC...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCAGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTC +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGAALRPL*RLRSRF
Trigger: GAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGC...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCTTTGCTAACCAACAATaGCCACACCCGCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSFANQQ*PHPRGA
Trigger: GGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAA...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATACTGGTGTTAGTGAGTaGCAAGATCGACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHTGVSE*QDRPTG
Trigger: CCCAGTTGGTCGATCTTGGCACTCACTAACACCAGT...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp ATGACTGCTTCTAAGCTTAGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACAATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: MTASKLSSSVMDKQVVGTIALEG*PRQVVS
Trigger: GCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTAT...TGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCTTAGAAGCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
CDS-3UTR CCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGACCCCAGACGAACATGTaGCGCCCGTCGCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRPQTNM*RPSLTA
Trigger: AGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGG...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCCCCCAGACGAACATGTaGCGCCCGTCGCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAPQTNM*RPSLTA
Trigger: AGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGG...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTCCACCCGCCTCAGCCTaGGCCTTCCAGAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGPPASA*AFQSPR
Trigger: CCTAGGACTCTGGAAGGCTCAGGCTGAGGCGGGTGG...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACACGGGACTCGGGGCACTaGAGGGAAGCGGTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTRDSGH*REAVRV
Trigger: GACGCGGACCGCTTCCCTGCAGTGCCCCGAGTCCCG...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACCGGCTACGTGGCCGCTaGGCTCAGCGGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINRLRGR*AQRGRQ
Trigger: TTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCG...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACTCGCTGACGGCTACGTaGCCGCTGCGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINSLTAT*PLRSAG
Trigger: CCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGA...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTTGTCACCCAGTGCAGTaGCAGGATCATGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFCHPVQ*QDHGSP
Trigger: TGGAGAGCCATGATCCTGTCACTGCACTGGGTGACA...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCTCTATTTCCGACAGTTaGACAGGCATGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSSISDS*TGMGST
Trigger: CGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGA...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp GCTTCTAAGCTTAGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCCACCCTGGCACAAGCTGTGTaGCATAACTTAGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ASKLSSSVMDKQVVGTSTLAQAV*HNLVAV
Trigger: AACAGCCACTAAGTTATGGCACACAGCTTGTGCCAG...GGTGGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCTTAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
CDS-3UTR CCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCCCCAGACGAACATGTaGCGCCCGTCGCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTPQTNM*RPSLTA
Trigger: AGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ACAATTACTTCTCCTTCATCGCTGGCACAAGCTGTGTGCCATAACCTTGGTTTTATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: TITSPSSLAQAVCHNLGFMGSTR*RCFTSS
Trigger: ACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCAT...AAAACCAAGGTTATGGCACACAGCTTGTGCCAGCGATGAAGGAGAAGTAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR GCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTALRPL*RLRSRF
Trigger: GAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGC...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGTTTGCTAACCAACAATaGCCACACCCGCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQFANQQ*PHPRGA
Trigger: GGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAA...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATACTGGTGTTAGTGAGTaGCAAGATCGACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHTGVSE*QDRPTG
Trigger: CCCAGTTGGTCGATCTTGGCACTCACTAACACCAGT...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATTCCACAGCAGGTTTCTaGAACTCAGGTAATATCCAA +
Preference number: 4 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHSTAGF*NSGNIQ
Trigger: TTGGATATTACCTGAGTTGCAGAAACCTGCTGTGGA...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACACCCCAGACGAACATGTaGCGCCCGTCGCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTPQTNM*RPSLTA
Trigger: AGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGG...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATGACTGCTTCTAAGCTTAGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACACTTCTCCTTCATCGCTaGCACAAGCTGTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: MTASKLSSSVMDKQVVGTLLLHR*HKLCAI
Trigger: TATGGCACACAGCTTGTGCCAGCGATGAAGGAGAAG...TGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCTTAGAAGCAGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
CDS-3UTR TCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTCACAGCACAGCTTCCTaGCATAGAAGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFHSTAS*HRRRNI
Trigger: GATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTG...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TATTTCATTACTGTGTGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCCCACAGCACAGCTTCCTaGCATAGAAGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: YFITVCSSVMDKQVVGTSHSTAS*HRRRNI
Trigger: GATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTG...GGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCACACAGTAATGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR GCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCGGAAAAGGAGAGAAATaGACAGCGGCGCGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAGKGEK*TAARGK
Trigger: CTTGCCTCGCGCCGCTGTGCATTTCTCTCCTTTTCC...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTTTCAGCATGACCACTTaGTCCAGCCCCTACACTGAA +
Preference number: 4 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRIFSMTT*SSPYTE
Trigger: TTCAGTGTAGGGGCTGGAGCAAGTGGTCATGCTGAA...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACCTATTGCAGCCCGTCTaGCCCGCCTCCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINLLQPV*PASCSP
Trigger: TGGACTGCAGGAGGCGGGGCAGACGGGCTGCAATAG...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555739.5
CDS-3UTR CCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGIALEG*PRQVVS
Trigger: GCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTAT...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSIALEG*PRQVVS
Trigger: GCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTAT...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLIALEG*PRQVVS
Trigger: GCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTAT...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATTCCTGGCAAAGTGAAAGTGTCTGCACCCAATCTTCTGAACGTAAAAAGGAAAGGCAGGCAAGCTCCATaGACTCATAGCTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: IPGKVKVSAPNLLNVKRKGRQAP*THSSRR
Trigger: CCTTCGAGAGCTATGAGTCCATGGAGCTTGCCTGCC...TTTCCTTTTTACGTTCAGAAGATTGGGTGCAGACACTTTCACTTTGCCAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEATVAQA*AARGEG
Trigger: ACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGT...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTCTTCTCCTTCATCGCTaGCACAAGCTGTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRILLLHR*HKLCAI
Trigger: TATGGCACACAGCTTGTGCCAGCGATGAAGGAGAAG...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCTCTGTCTGTAGACCTTaGATCCAGCATGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICSVCRP*IQHVEL
Trigger: AAGTTCTACATGCTGGATTCAAGGTCTACAGACAGA...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGAATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRMGSTR*RCFTSS
Trigger: ACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCAT...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAMGSTR*RCFTSS
Trigger: ACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCAT...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAGGAAAAGGAGAGAAATaGACAGCGGCGCGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALGKGEK*TAARGK
Trigger: CTTGCCTCGCGCCGCTGTGCATTTCTCTCCTTTTCC...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGGAAAAGGAGAGAAATaGACAGCGGCGCGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGGKGEK*TAARGK
Trigger: CTTGCCTCGCGCCGCTGTGCATTTCTCTCCTTTTCC...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGGAAAAGGAGAGAAATaGACAGCGGCGCGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSGKGEK*TAARGK
Trigger: CTTGCCTCGCGCCGCTGTGCATTTCTCTCCTTTTCC...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTTTTGCTAACCAACAATaGCCACACCCGCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTFANQQ*PHPRGA
Trigger: GGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAA...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATTTGCTAACCAACAATaGCCACACCCGCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAFANQQ*PHPRGA
Trigger: GGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTACTTACTCGATATCTaGCTCCAAACACGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHYLLDI*LQTRSL
Trigger: GAGGCTTCGTGTTTGGAGGCAGATATCGAGTAAGTA...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCCCAGTAGTTATAGGCTaGCTCCAGGTAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICPVVIG*LQVNVS
Trigger: TGAAACATTTACCTGGAGCCAGCCTATAACTACTGG...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGTVAQA*AARGEG
Trigger: ACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGT...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLTVAQA*AARGEG
Trigger: ACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGT...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALTVAQA*AARGEG
Trigger: ACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGT...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEACHQPS*GCTFAN
Trigger: GTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCA...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCATGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGACHQPS*GCTFAN
Trigger: GTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCA...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGCACAGCACAGCTTCCTaGCATAGAAGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKHSTAS*HRRRNI
Trigger: GATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTG...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSIGIAS*MVSSKQ
Trigger: TTGTTTGGAGGACACCATTCAAGAGGCAATACCAAT...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp ATGACTGCTTCTAAGCTTAGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCTGTCTGTAGACCTTaGATCCAGCATGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: MTASKLSSSVMDKQVVGTSVCRP*IQHVEL
Trigger: AAGTTCTACATGCTGGATTCAAGGTCTACAGACAGA...TGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCTTAGAAGCAGTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
CDS-3UTR TCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCTCCATTCATTTTTACTaGTGCAGTAAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICSIHFY*CSKSRH
Trigger: ATGCCTGGACTTACTGCATCAGTAAAAATGAATGGA...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTTTAAGGTCAAAGTACTaGACAGTTGTTGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFLRSKY*TVVGPS
Trigger: GGAGGGACCAACAACTGTTCAGTACTTTGACCTTAA...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTTTTGCTAACCAACAATaGCCACACCCGCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGFANQQ*PHPRGA
Trigger: GGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAA...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTTCTATTTCCGACAGTTaGACAGGCATGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSSISDS*TGMGST
Trigger: CGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGA...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGTCTATTTCCGACAGTTaGACAGGCATGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLSISDS*TGMGST
Trigger: CGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGA...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCACTGGTGTTAGTGAGTaGCAAGATCGACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEATGVSE*QDRPTG
Trigger: CCCAGTTGGTCGATCTTGGCACTCACTAACACCAGT...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCTATTTCATTACTGTGTaGAGCTCTGTGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICYFITV*SSVMDK
Trigger: CTTGTCCATCACAGAGCTGCACACAGTAATGAAATA...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATCAAAGTGAAAGTGTCTaGACCCAATCTTCTGAACGT +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHQSESV*TQSSER
Trigger: ACGTTCAGAAGATTGGGTGCAGACACTTTCACTTTG...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHATVAQA*AARGEG
Trigger: ACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGT...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGACTTCTCCTTCATCGCTaGCACAAGCTGTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRLLLHR*HKLCAI
Trigger: TATGGCACACAGCTTGTGCCAGCGATGAAGGAGAAG...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR TCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTATGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALCHQPS*GCTFAN
Trigger: GTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCA...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGCTCCAGCCCCTACACTaGAGCATTAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQLQPLH*SIKVKV
Trigger: TACTTTGACCTTAATGCTTCAGTGTAGGGGCTGGAG...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATGACCAACTGGGCATATaGCTTGTGGAATTAATTCAT +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHDQLGI*LVELIH
Trigger: ATGAATTAATTCCACAAGGCATATGCCCAGTTGGTC...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp CAGGCATCACTTAGTGGCTGTTTATCAGTGGTAAATCCTCCAAAGAGAAAAAGACTGGCACAAGCTGTGTaGCATAACCTTGGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: QASLSGCLSVVNPPKRKRLAQAV*HNLGFS
Trigger: CGAAAAACCAAGGTTATGGCACACAGCTTGTGCCAG...TCTTTTTCTCTTTGGAGGATTTACCACTGATAAACAGCCACTAAGTGATGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR GCA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCTCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 4 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSSRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CCA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTGTATTGCCTCTTGAATaGTGTCCTCCAAACAAGTAC +
Preference number: 4 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRIVLPLE*CPPNKY
Trigger: GTACTTGTTTGGAGGACACCATTCAAGAGGCAATAC...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTCCAGTAGTTATAGGCTaGCTCCAGGTAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFPVVIG*LQVNVS
Trigger: TGAAACATTTACCTGGAGCCAGCCTATAACTACTGG...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGCCAAGATCGACCAACTaGGCATATGCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQPRSTN*AYALWN
Trigger: ATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGG...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCACCAAGATCGACCAACTaGGCATATGCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGAPRSTN*AYALWN
Trigger: ATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGG...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGACCAAGATCGACCAACTaGGCATATGCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRPRSTN*AYALWN
Trigger: ATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGG...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCCCAAGATCGACCAACTaGGCATATGCCTTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSPRSTN*AYALWN
Trigger: ATTCCACAAGGCATATGCCCAGTTGGTCGATCTTGG...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTACTTCTCCTTCATCGCTaGCACAAGCTGTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALLLLHR*HKLCAI
Trigger: TATGGCACACAGCTTGTGCCAGCGATGAAGGAGAAG...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATAGTCATATAATCCTCTaGCTTGATTACTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHSHIIL*LDYSCS
Trigger: GCTACAAGAGTAATCAAGTCAGAGGATTATATGACT...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCACACAGCACAGCTTCCTaGCATAGAAGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAHSTAS*HRRRNI
Trigger: GATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTG...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTMGSTR*RCFTSS
Trigger: ACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCAT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGT +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINMGSTR*RCFTSS
Trigger: ACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCAT...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCACTGTGTGCAGCTCTGTaGTGGACAAGCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHALCAAL*WTSKLL
Trigger: CAACAACTTGCTTGTCCATCACAGAGCTGCACACAG...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298307.10
ENST00000555443.5
CDS-3UTR TCA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATCATAGGCATTATTTATaGAGCCTTAAGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHHRHYL*SLKIQK
Trigger: CTTCTGGATCTTAAGGCTTCATAAATAATGCCTATG...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGCCAGCCACATCCTaGAGATGTACTACTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHARPATS*RCTTVC
Trigger: GCAAACAGTAGTACATCTTCAGGATGTGGCTGGCCT...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTAGCTTAGCAGCTCTGTaGTGGACAAGCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSSLAAL*WTSKLL
Trigger: CAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCT...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554589.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTACTGGTGTTAGTGAGTaGCAAGATCGACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTTGVSE*QDRPTG
Trigger: CCCAGTTGGTCGATCTTGGCACTCACTAACACCAGT...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTCTGGCACAAGCTGTGTaGCATAACCTTGGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGLAQAV*HNLGFS
Trigger: CGAAAAACCAAGGTTATGGCACACAGCTTGTGCCAG...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
CDS-3UTR GCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTTCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFSRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAATAGGCGTGAACCACTaGTCCTGGGCCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTIGVNH*SWAFFL
Trigger: GAGAAAGAAGGCCCAGGAGCAGTGGTTCACGCCTAT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGACTATCTCTAGACATTaGCCATTGTCTTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQTISRH*PLSSEG
Trigger: GCCCTCAGAAGACAATGGGCAATGTCTAGAGATAGT...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACATGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTCHQPS*GCTFAN
Trigger: GTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCA...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GTTGTGGGGTCTGTCCCATTCATTATAAAATGTTTAGCGACATCCTCGGCCTTTAGTCATATAATCCTCTaGCTTGATTACTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VVGSVPFIIKCLATSSAFSHIIL*LDYSCS
Trigger: GCTACAAGAGTAATCAAGTCAGAGGATTATATGACT...AAAGGCCGAGGATGTCGCTAAACATTTTATAATGAATGGGACAGACCCCACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACCACAGCACAGCTTCCTaGCATAGAAGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINHSTAS*HRRRNI
Trigger: GATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTG...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKIGIAS*MVSSKQ
Trigger: TTGTTTGGAGGACACCATTCAAGAGGCAATACCAAT...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGAATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRIGIAS*MVSSKQ
Trigger: TTGTTTGGAGGACACCATTCAAGAGGCAATACCAAT...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGTCTGTCTGTAGACCTTaGATCCAGCATGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQSVCRP*IQHVEL
Trigger: AAGTTCTACATGCTGGATTCAAGGTCTACAGACAGA...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAGGAAAACCTATTTaGTTCTTTGACAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEALGKPI*FFDRPA
Trigger: GGCTGGCCTGTCAAAGAATCAAATAGGTTTTCCTAA...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGAGATGTACTACTGTTTaGCATTCCAATATGTGCCCC +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQRCTTV*HSNMCP
Trigger: GGGGCACATATTGGAATGGCAAACAGTAGTACATCT...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCGTATTGCCTCTTGAATaGTGTCCTCCAAACAAGTAC +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSVLPLE*CPPNKY
Trigger: GTACTTGTTTGGAGGACACCATTCAAGAGGCAATAC...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCGTATTGCCTCTTGAATaGTGTCCTCCAAACAAGTAC +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAVLPLE*CPPNKY
Trigger: GTACTTGTTTGGAGGACACCATTCAAGAGGCAATAC...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEADGGIP*QSILSH
Trigger: GTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATC...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGGGACAAGCAAGTTGTTaGCACATCCACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQGQASC*HIHQKQ
Trigger: TTGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCC...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGGGACAAGCAAGTTGTTaGCACATCCACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKGQASC*HIHQKQ
Trigger: TTGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCC...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAA +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSIGIAS*MVSSKQ
Trigger: TTGTTTGGAGGACACCATTCAAGAGGCAATACCAAT...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGTCCATTCATTTTTACTaGTGCAGTAAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKSIHFY*CSKSRH
Trigger: ATGCCTGGACTTACTGCATCAGTAAAAATGAATGGA...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAACATTCCTGGCAAAGTaGAAGTGTCTGCACCCAATC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTTFLAK*KCLHPI
Trigger: GATTGGGTGCAGACACTTTCACTTTGCCAGGAATGT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTAGCTTAGCAGCTCTGTaGTGGACAAGCAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPSLAAL*WTSKLL
Trigger: CAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCT...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554589.5
ENST00000557247.1
CDS-3UTR GCA 90 bp ATTCCTGGCAAAGTGAAAGTGTCTGCACCCAATCTTCTGAACGTAAAAAGGAAAGACCAACTGGGCATATaGCTTGTGGAATTAATTCAT +
Preference number: 4 (lower is better)
Translates to: IPGKVKVSAPNLLNVKRKDQLGI*LVELIH
Trigger: ATGAATTAATTCCACAAGGCATATGCCCAGTTGGTC...TTTCCTTTTTACGTTCAGAAGATTGGGTGCAGACACTTTCACTTTGCCAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGAGACCAACTGGGCATATaGCTTGTGGAATTAATTCAT +
Preference number: 4 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRDQLGI*LVELIH
Trigger: ATGAATTAATTCCACAAGGCATATGCCCAGTTGGTC...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACACTGGCACAAGCTGTGTaGCATAACCTTGGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTLAQAV*HNLGFS
Trigger: CGAAAAACCAAGGTTATGGCACACAGCTTGTGCCAG...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000298307.10
ENST00000555443.5
CDS-3UTR GCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTATTTCATTACTGTGTaGAGCTCTGTGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAYFITV*SSVMDK
Trigger: CTTGTCCATCACAGAGCTGCACACAGTAATGAAATA...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298307.10
ENST00000555443.5
CDS-3UTR GCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTTACTTACTCGATATCTaGCTCCAAACACGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTYLLDI*LQTRSL
Trigger: GAGGCTTCGTGTTTGGAGGCAGATATCGAGTAAGTA...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLDGGIP*QSILSH
Trigger: GTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATC...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGCCAGTAGTTATAGGCTaGCTCCAGGTAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLPVVIG*LQVNVS
Trigger: TGAAACATTTACCTGGAGCCAGCCTATAACTACTGG...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGGACAAGCAAGTTGTTaGCACATCCACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSGQASC*HIHQKQ
Trigger: TTGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCC...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAGGACAAGCAAGTTGTTaGCACATCCACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALGQASC*HIHQKQ
Trigger: TTGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCC...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGTGAACCACTGCTCCTaGGCCTTCTTTCTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAVNHCS*AFFLLN
Trigger: ATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGAAGTCATATAATCCTCTaGCTTGATTACTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRSHIIL*LDYSCS
Trigger: GCTACAAGAGTAATCAAGTCAGAGGATTATATGACT...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCAAGTCATATAATCCTCTaGCTTGATTACTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGASHIIL*LDYSCS
Trigger: GCTACAAGAGTAATCAAGTCAGAGGATTATATGACT...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATCTGTCTGTAGACCTTaGATCCAGCATGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHASVCRP*IQHVEL
Trigger: AAGTTCTACATGCTGGATTCAAGGTCTACAGACAGA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGTCCTCTTGGATGACTTaGATTCCAAAAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQSSWMT*IPKRCF
Trigger: GAAACATCTTTTTGGAATTCAAGTCATCCAAGAGGA...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCTCCTCTTGGATGACTTaGATTCCAAAAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSSSWMT*IPKRCF
Trigger: GAAACATCTTTTTGGAATTCAAGTCATCCAAGAGGA...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTCCATCCTCTTGGATaGCTTGAATTCCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEAFHPLG*LEFQKD
Trigger: ATCTTTTTGGAATTCAAGTCATCCAAGAGGATGGAA...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTAATGATGCCACTCTGTaGTGTTTACAGGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTNDATL*CLQDCC
Trigger: ACAGCAATCCTGTAAACATCACAGAGTGGCATCATT...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCAATATTACAGGCCAAATaGACTAAACATTGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGAILQAK*TKHCLA
Trigger: AGCAAGGCAATGTTTAGTTCATTTGGCCTGTAATAT...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTTTGGAAGTTCAAAGATaGAAGCACCATGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGLEVQR*KHHVSG
Trigger: TCCTGATACATGGTGCTTTCATCTTTGAACTTCCAA...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR GCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGACCAACTGGGCATATaGCTTGTGGAATTAATTCAT +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGDQLGI*LVELIH
Trigger: ATGAATTAATTCCACAAGGCATATGCCCAGTTGGTC...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR GCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTCAGGATTGCTGTCCATaGAAGGTGATCATAGGCATT +
Preference number: 4 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGQDCCP*KVIIGI
Trigger: AATGCCTATGATCACCTTGCATGGACAGCAATCCTG...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGTCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLSRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGTATTGCCTCTTGAATaGTGTCCTCCAAACAAGTAC +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAVLPLE*CPPNKY
Trigger: GTACTTGTTTGGAGGACACCATTCAAGAGGCAATAC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHADGGIP*QSILSH
Trigger: GTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCCAGTAGTTATAGGCTaGCTCCAGGTAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTPVVIG*LQVNVS
Trigger: TGAAACATTTACCTGGAGCCAGCCTATAACTACTGG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCACCAGTAGTTATAGGCTaGCTCCAGGTAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAPVVIG*LQVNVS
Trigger: TGAAACATTTACCTGGAGCCAGCCTATAACTACTGG...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGTACTGAACAGTTGTTaGTCCCTCCACACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAVLNSC*SLHTLF
Trigger: AAACAAAGTGTGGAGGGACCAACAACTGTTCAGTAC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCAACTTTTTAATTGACTaGACAGCACCTGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEANFLID*TAPACI
Trigger: AATACAGGCAGGTGCTGTCCAGTCAATTAAAAAGTT...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCCTGTTCCAGCTTAGATaGTATGTATATCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEALFQLR*YVYQEK
Trigger: CTTTTCCTGATATACATACCATCTAAGCTGGAACAG...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCATGGTCTTCAACTCTTTaGAACTATGAAGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGAWSSTL*NYEAEF
Trigger: AAACTCTGCTTCATAGTTCCAAAGAGTTGAAGACCA...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTTCTGTCTGTAGACCTTaGATCCAGCATGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGSVCRP*IQHVEL
Trigger: AAGTTCTACATGCTGGATTCAAGGTCTACAGACAGA...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTTTCCATCCTCTTGGATaGCTTGAATTCCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSFHPLG*LEFQKD
Trigger: ATCTTTTTGGAATTCAAGTCATCCAAGAGGATGGAA...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATCCATTCATTTTTACTaGTGCAGTAAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHASIHFY*CSKSRH
Trigger: ATGCCTGGACTTACTGCATCAGTAAAAATGAATGGA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTACATAGGCATTATTTATaGAGCCTTAAGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALHRHYL*SLKIQK
Trigger: CTTCTGGATCTTAAGGCTTCATAAATAATGCCTATG...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGCATAGGCATTATTTATaGAGCCTTAAGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLHRHYL*SLKIQK
Trigger: CTTCTGGATCTTAAGGCTTCATAAATAATGCCTATG...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCATAGGCATTATTTATaGAGCCTTAAGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSHRHYL*SLKIQK
Trigger: CTTCTGGATCTTAAGGCTTCATAAATAATGCCTATG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACACCCCTTACACCACCATaGCAAACTACAAGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTPLTPP*QTTSKL
Trigger: TAACTTACTTGTAGTTTGTCATGGTGGTGTAAGGGG...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTCATTGAAGTCGTTTaGATACTTACTCGATATCTG +
Preference number: 4 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSVIEVV*ILTRYL
Trigger: CAGATATCGAGTAAGTATTCAAACGACTTCAATGAC...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR GCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHASRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACGTATTGCCTCTTGAATaGTGTCCTCCAAACAAGTAC +
Preference number: 4 (lower is better)
Translates to: IYEALRSRSVVTTKPLINVLPLE*CPPNKY
Trigger: GTACTTGTTTGGAGGACACCATTCAAGAGGCAATAC...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTDGGIP*QSILSH
Trigger: GTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATC...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CCA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGTTAATTCTTTGTTGTaGGGTCTGTCCCATTCATTA +
Preference number: 4 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGVNSLL*GLSHSL
Trigger: TAATGAATGGGACAGACCCCACAACAAAGAATTAAC...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGATTAACATTAGGGGTTaGTTAATTCTTTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQINIRG*LILCCG
Trigger: CCCACAACAAAGAATTAACCAACCCCTAATGTTAAT...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCATTACTGTGTGCCTTaGTTTTTCGGTATATGGATG +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTHYCVP*FFGIWM
Trigger: CATCCATATACCGAAAAACCAAGGCACACAGTAATG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555739.5
3UTR CAA 72 bp GTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTaGTTTTTCCAGCTTCGTCATAATGTGAATATTAAT +
Preference number: 4 (lower is better)
Translates to: VKVLNSCWSLHT*FFQLRHNVNIN
Trigger: ATTAATATTCACATTATGACGAAGCTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTAGTCATATAATCCTCTaGCTTGATTACTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTSHIIL*LDYSCS
Trigger: GCTACAAGAGTAATCAAGTCAGAGGATTATATGACT...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTTCCTCTTGGATGACTTaGATTCCAAAAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: YEALRSRSVVTTKPLINTSSWMT*IPKRCF
Trigger: GAAACATCTTTTTGGAATTCAAGTCATCCAAGAGGA...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATTCCATCCTCTTGGATaGCTTGAATTCCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAFHPLG*LEFQKD
Trigger: ATCTTTTTGGAATTCAAGTCATCCAAGAGGATGGAA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR GCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACATCTAGGCCATTCACATaGACATTAAAACCAACAGGT +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTSRPFT*TLKPTG
Trigger: ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGA...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTTCCTCTTGGATGACTTaGATTCCAAAAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPSSWMT*IPKRCF
Trigger: GAAACATCTTTTTGGAATTCAAGTCATCCAAGAGGA...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTTCCTCTTGGATGACTTaGATTCCAAAAAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGSSWMT*IPKRCF
Trigger: GAAACATCTTTTTGGAATTCAAGTCATCCAAGAGGA...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR TCA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTTTCCATCCTCTTGGATaGCTTGAATTCCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPFHPLG*LEFQKD
Trigger: ATCTTTTTGGAATTCAAGTCATCCAAGAGGATGGAA...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR TCA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGTCATAAAAGAAACATaGTTGACCATACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTVIKET*LTIQDV
Trigger: CACATCCTGTATGGTCAATCATGTTTCTTTTATGAC...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR TCA 90 bp ATTTCTTTAAAGCAAATGACTGCTTCTAAGCTTAGCCGTACAAGAGATTTTGGTGTCATTGAAGTCGTTTaGATACTTACTCGATATCTG +
Preference number: 4 (lower is better)
Translates to: ISLKQMTASKLSRTRDFGVIEVV*ILTRYL
Trigger: CAGATATCGAGTAAGTATTCAAACGACTTCAATGAC...ACCAAAATCTCTTGTACGGCTAAGCTTAGAAGCAGTCATTTGCTTTAAAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS TCA 90 bp CAGCGGCGCGAGGCAAGGAAAAGGCGGTGGCGAAAGGGACGGCGTTaGGGCCTCTCTGCCGCCTGCGCTCGCGTTTCCCAGCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: QRREARKRRWRKGRR*GLSAACARVSQPPR
Trigger: CCGAGGAGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGCCGTCCCTTTCGCCACCGCCTTTTCCTTGCCTCGCGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS GCA 90 bp GGCAAGGAAAAGGCGGTGGCGAAAGGGACGGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTCCCAGCCTCCTCGGCCGAGGACGGC +
Preference number: 5 (lower is better)
Translates to: GKEKAVAKGTALRPL*RLRSRFPASSAEDG
Trigger: GCCGTCCTCGGCCGAGGAGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGCCGTCCCTTTCGCCACCGCCTTTTCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS TCA 90 bp GATTACTCTTGTAGCCGCCCCAGACGAACATGTGGCGCCCGTCGCTaGCGGCTACGTGGCCGCTGCGCTCAGCGGGGCAGGCAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: DYSCSRPRRTCGARR*RLRGRCAQRGRQAP
Trigger: TGGAGCTTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGGCGGCTACAAGAGTAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS CCA 90 bp CTCAGCGGGGCAGGCAAGCTCCATGGACTCATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGCCCGCAGATCCTCGTTGCCATCAGC +
Preference number: 5 (lower is better)
Translates to: LSGAGKLHGLIALEG*PRQVVSPQILVAIS
Trigger: GCTGATGGCAACGAGGATCTGCGGGCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTATGAGTCCATGGAGCTTGCCTGCCCCGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS TCA 90 bp CAGGCAAGTCGTCAGCCCGCAGATCCTCGTTGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAACCAACAATGCCCACACCCGCGAGGG +
Preference number: 5 (lower is better)
Translates to: QASRQPADPRCHQPS*GCTFANQQCPHPRG
Trigger: CCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCAACGAGGATCTGCGGGCTGACGACTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS CCA 90 bp CCCCGGAATAACGCTCCAATGGCAACAACGGGGGTGGGAGTGAGTTaGCTTTGTGAGCACCAGGGTGACATGACAGCAGCCCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PRNNAPMATTGVGVS*LCEHQGDMTAALEV
Trigger: AACCTCCAGGGCTGCTGTCATGTCACCCTGGTGCTCACAAAGCCAACTCACTCCCACCCCCGTTGTTGCCATTGGAGCGTTATTCCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553538.5
CDS TCA 90 bp CCAGAGGGTGAAGTCCTCGTAGGCCGTCCTCATAACGCGTCTGAGTaGTATCACACACCGTCACCTTTCACACCCCAACCCTTCCGAATG +
Preference number: 5 (lower is better)
Translates to: PEGEVLVGRPHNASE*YHTPSPFTPQPFRM
Trigger: CATTCGGAAGGGTTGGGGTGTGAAAGGTGACGGTGTGTGATATCACTCAGACGCGTTATGAGGACGGCCTACGAGGACTTCACCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553538.5
CDS CCA 90 bp CTGCCTCCAAACACGAAGCCTCTATTTCCGACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGTGCTTTACCAGTAGTTATAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LPPNTKPLFPTVAQA*AARGEGALPVVIGW
Trigger: CCAGCCTATAACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAGGCTTCGTGTTTGGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTGGACAAGCAAGTTGTaGGCACATCCACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGWTSKL*AHPPKT
Trigger: TGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp GTCACCCAGTGCAGTGACAGGATCATGGCTCTCCACAACGTCTACCTCCTGGGCTGTGAAGTAAGTGTTTaGGAAGGCAGTTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: VTQCSDRIMALHNVYLLGCEVSV*EGSSMS
Trigger: ACTCATGGAACTGCCTTCCAAAACACTTACTTCACA...GCCCAGGAGGTAGACGTTGTGGAGAGCCATGATCCTGTCACTGCACTGGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACCGGGCCGGCTCCCTATaGCAGCCCGTCTGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: IYEALRSRSVVTTKPLINRAGSL*QPVCPA
Trigger: GGCGGGGCAGACGGGCTGCAATAGGGAGCCGGCCCG...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555739.5
CDS-3UTR CAA 90 bp GATCTGAAGAAACTGGTGTTAGTGAGTGCCAAGATCGACCAACTGGGCATATGCCTCTATTTCCGACAGTaGCACAGGCATGGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: DLKKLVLVSAKIDQLGICLYFRQ*HRHGQH
Trigger: GTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAG...GCATATGCCCAGTTGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CAA 90 bp CAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGAGCCCGCAGATCCTCGTaGCCATCAGCCATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QDCCPCKVIIGIIYEALRARRSS*PSAILR
Trigger: CCTCAAGATGGCTGATGGCAACGAGGATCTGCGGGC...TCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATAACCTATTTGATTCTTaGACAGGCCAGCCACATCCT +
Preference number: 5 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHNLFDS*TGQPHP
Trigger: AGGATGTGGCTGGCCTGTCAAAGAATCAAATAGGTT...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp CTTTACCCACTAGATCCCAGTAGCAGCCCCTACCTATTCCTTCTCACCCCTCATGCTGCAAAAACAGCCTaGAATAGTTTCATGCATTCC +
Preference number: 5 (lower is better)
Translates to: LYPLDPSSSPYLFLLTPHAAKTA*NSFMHS
Trigger: GGAATGCATGAAACTATTCAAGGCTGTTTTTGCAGC...ATGAGGGGTGAGAAGGAATAGGTAGGGGCTGCTACTGGGATCTAGTGGGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHTQTPS*SFDDGG
Trigger: TCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGT...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCACTCTATTTCCGACAGTaGCACAGGCATGGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGALYFRQ*HRHGQH
Trigger: GTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAG...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GCTTCTAAGCTTAGCAGCTCTGTGATGGACAAGCAAGTTGTTGGCACATCCACCTGTGAAGTAAGTGTTTaGGAAGGCAGTTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: ASKLSSSVMDKQVVGTSTCEVSV*EGSSMS
Trigger: ACTCATGGAACTGCCTTCCAAAACACTTACTTCACA...GGTGGATGTGCCAACAACTTGCTTGTCCATCACAGAGCTGCTAAGCTTAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557247.1
CDS-3UTR CAA 90 bp ATTAAGGTCAAAGTACTGAACAGTTGTTGGTCCCTCCACACTTTGTTTTTCCAGTTGCTTAGGCTGGTCTaGAACTCCTGGGCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: IKVKVLNSCWSLHTLFFQLLRLV*NSWAQA
Trigger: CGCTTGAGCCCAGGAGTTCAAGACCAGCCTAAGCAA...CTGGAAAAACAAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTGACCTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGCCCGCAGATCCTCGTaGCCATCAGCCATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTARRSS*PSAILR
Trigger: CCTCAAGATGGCTGATGGCAACGAGGATCTGCGGGC...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTCTCTATTTCCGACAGTaGCACAGGCATGGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGLYFRQ*HRHGQH
Trigger: GTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAG...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCTCTATTTCCGACAGTaGCACAGGCATGGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSLYFRQ*HRHGQH
Trigger: GTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp CGACCAACTGGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: RPTGHMPCGINSFHSHVSVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...GGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCCAGTTGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CAA 90 bp TGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCCTTGAGGCTGCACTTTaGCTAACCAACAATGCCCAC +
Preference number: 5 (lower is better)
Translates to: CLQDCCPCKVIIGIIYEALEAAL*LTNNAH
Trigger: GTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAG...GGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp CACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTGCACTTGAGGCTGCACTTTaGCTAACCAACAATGCCCAC +
Preference number: 5 (lower is better)
Translates to: HKNRFSRPFTCTLKPTGALEAAL*LTNNAH
Trigger: GTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAG...TGCACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATCACCAAGTTTGTCCTTaGATGATGGAGGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: CHSVMFTGLLSMQGDHRHHQVCP*MMEEFL
Trigger: AAGGAATTCCTCCATCATCAAAGGACAAACTTGGTG...ATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRIVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS TCA 90 bp CAAGCCATAATCCTTAGAAACACTAACCTTATTGGTATTGCCTCTTaGATGGTGTCCTCCAAACAAGTACAGCACCCTGTCTACACACAC +
Preference number: 5 (lower is better)
Translates to: QAIILRNTNLIGIAS*MVSSKQVQHPVYTH
Trigger: GTGTGTGTAGACAGGGTGCTGTACTTGTTTGGAGGACACCATTCAAGAGGCAATACCAATAAGGTTAGTGTTTCTAAGGATTATGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553703.1
CDS-3UTR CAA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKTQTPS*SFDDGG
Trigger: TCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGT...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GTGAACCACTGCTCCTGGGCCTTCTTTCTCTTAAATGTAACTGTAGGTAGGATTTTGGTTAATTCTTTGTaGTGGGGTCTGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: VNHCSWAFFLLNVTVGRILVNSL*WGLSHS
Trigger: TGAATGGGACAGACCCCACAACAAAGAATTAACCAA...AATCCTACCTACAGTTACATTTAAGAGAAAGAAGGCCCAGGAGCAGTGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS GCA 90 bp TTCAAAAGCAAGTCATTGAAGTCGTTTGAATACTTACTCGATATCTaGCTCCAAACACGAAGCCTCTATTTCCGACAGTTGCACAGGCAT +
Preference number: 5 (lower is better)
Translates to: FKSKSLKSFEYLLDI*LQTRSLYFRQLHRH
Trigger: ATGCCTGTGCAACTGTCGGAAATAGAGGCTTCGTGTTTGGAGGCAGATATCGAGTAAGTATTCAAACGACTTCAATGACTTGCTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
CDS CCA 90 bp TATACCCAGACACCAAGTTTGTCCTTTGATGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCACTGTAACACTCTGTCTGTAGACCTT +
Preference number: 5 (lower is better)
Translates to: YTQTPSLSFDDGGIP*QSILSHCNTLSVDL
Trigger: AAGGTCTACAGACAGAGTGTTACAGTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298307.10
ENST00000553538.5
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCTTGAGGCTGCACTTTaGCTAACCAACAATGCCCAC +
Preference number: 5 (lower is better)
Translates to: YEALRSRSVVTTKPLINTLEAAL*LTNNAH
Trigger: GTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSTQTPS*SFDDGG
Trigger: TCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGT...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALTQTPS*SFDDGG
Trigger: TCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGT...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGATGGACAAGCAAGTTGTaGGCACATCCACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRWTSKL*AHPPKT
Trigger: TGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCA...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555443.5
CDS-3UTR CAA 90 bp ATTCCTGGCAAAGTGAAAGTGTCTGCACCCAATCTTCTGAACGTAAAAAGGAAACAAAGTACTGAACAGTaGTTGGTCCCTCCACACTTT +
Preference number: 5 (lower is better)
Translates to: IPGKVKVSAPNLLNVKRKQSTEQ*LVPPHF
Trigger: AAAGTGTGGAGGGACCAACAACTGTTCAGTACTTTG...TTTCCTTTTTACGTTCAGAAGATTGGGTGCAGACACTTTCACTTTGCCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp GCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTGTGAAGTATTGGTATTGCCTCTaGAATGGTGTCCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: ALRSRSVVTTKPLINTVKYWYCL*NGVLQT
Trigger: TGTTTGGAGGACACCATTCAAGAGGCAATACCAATA...CTTCACAGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCTATTGGTATTGCCTCTaGAATGGTGTCCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: DCCPCKVIIGIIYEALRSYWYCL*NGVLQT
Trigger: TGTTTGGAGGACACCATTCAAGAGGCAATACCAATA...GGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTACAGGATTGCTGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTATGGACAAGCAAGTTGTaGGCACATCCACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: LQDCCPCKVIIGIIYEALWTSKL*AHPPKT
Trigger: TGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCA...TAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACAGCAATCCTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp GGGCATATGCCTTGTGGAATTAATTCATTCCACTCCCATGTATCCAGATTAAGATGTGAAGTAAGTGTTTaGGAAGGCAGTTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: GHMPCGINSFHSHVSRLRCEVSV*EGSSMS
Trigger: ACTCATGGAACTGCCTTCCAAAACACTTACTTCACA...TCTTAATCTGGATACATGGGAGTGGAATGAATTAATTCCACAAGGCATATGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555443.5
ENST00000555739.5
CDS-3UTR CAA 90 bp GGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: GIIYEALRSRSVVTTKPLVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...CAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCATGGTCCCTCCACACTTaGTTTTTCCAGCTTCGTCAT +
Preference number: 5 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAWSLHT*FFQLRH
Trigger: ATGACGAAGCTGGAAAAACAAAGTGTGGAGGGACCA...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTTATTGGTATTGCCTCTaGAATGGTGTCCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSYWYCL*NGVLQT
Trigger: TGTTTGGAGGACACCATTCAAGAGGCAATACCAATA...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTCACCAAGTTTGTCCTTaGATGATGGAGGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGHQVCP*MMEEFL
Trigger: AAGGAATTCCTCCATCATCAAAGGACAAACTTGGTG...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTTQTPS*SFDDGG
Trigger: TCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TGTCCATGCAAGGTGATCATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTCTGTGTGCCATAACCTaGGTTTTTCGGTATATGGAT +
Preference number: 5 (lower is better)
Translates to: CPCKVIIGIIYEALRSRSLCAIT*VFRYMD
Trigger: ATCCATATACCGAAAAACCAAGGTTATGGCACACAG...ACTTCTGGATCTTAAGGCTTCATAAATAATGCCTATGATCACCTTGCATGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554589.5
ENST00000555443.5
CDS-3UTR CAA 90 bp AGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAGGTTGTGAAGTAAGTGTTTaGGAAGGCAGTTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: RHKNRFSRPFTCTLKPTGCEVSV*EGSSMS
Trigger: ACTCATGGAACTGCCTTCCAAAACACTTACTTCACA...ACCTGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCAGTGATGTTTACAGGATaGCTGTCCATGCAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAVMFTG*LSMQGD
Trigger: ATCACCTTGCATGGACAGCAATCCTGTAAACATCAC...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACATGGTGTTTCTCCATGTaGCTTAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTWCFSM*LRLVLN
Trigger: GTTCAAGACCAGCCTAAGCAACATGGAGAAACACCA...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp ATAATTATACAAATGATGCCACTCTGTGATGTTTACAGGATTGCTGTCCATGCACACCAAGTTTGTCCTTaGATGATGGAGGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: IIIQMMPLCDVYRIAVHAHQVCP*MMEEFL
Trigger: AAGGAATTCCTCCATCATCAAAGGACAAACTTGGTG...TGCATGGACAGCAATCCTGTAAACATCACAGAGTGGCATCATTTGTATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTCTGTGTGCCATAACCTaGGTTTTTCGGTATATGGAT +
Preference number: 5 (lower is better)
Translates to: YEALRSRSVVTTKPLINTLCAIT*VFRYMD
Trigger: ATCCATATACCGAAAAACCAAGGTTATGGCACACAG...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554589.5
ENST00000555443.5
CDS-3UTR CAA 90 bp ATAGGCATTATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTTGGACAAGCAAGTTGTaGGCACATCCACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: IGIIYEALRSRSVVTTKPWTSKL*AHPPKT
Trigger: TGTTTTTGGTGGATGTGCCAACAACTTGCTTGTCCA...AGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAATAATGCCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAAGTACTGAACAGTTGTaGGTCCCTCCACACTTTGTT +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTSTEQL*VPPHFV
Trigger: AACAAAGTGTGGAGGGACCAACAACTGTTCAGTACT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACATATTGGTATTGCCTCTaGAATGGTGTCCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTYWYCL*NGVLQT
Trigger: TGTTTGGAGGACACCATTCAAGAGGCAATACCAATA...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298307.10
ENST00000555443.5
ENST00000557247.1
CDS-3UTR CAA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACCACCAAGTTTGTCCTTaGATGATGGAGGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: IYEALRSRSVVTTKPLINHQVCP*MMEEFL
Trigger: AAGGAATTCCTCCATCATCAAAGGACAAACTTGGTG...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACACTGTGTGCCATAACCTaGGTTTTTCGGTATATGGAT +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTLCAIT*VFRYMD
Trigger: ATCCATATACCGAAAAACCAAGGTTATGGCACACAG...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000298307.10
ENST00000555443.5
CDS-3UTR CAA 90 bp ATTTATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACTGTGAAGTAAGTGTTTaGGAAGGCAGTTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: IYEALRSRSVVTTKPLINCEVSV*EGSSMS
Trigger: ACTCATGGAACTGCCTTCCAAAACACTTACTTCACA...GTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS-3UTR CAA 90 bp TTTAGACACAAAAATAGGTTCTCTAGGCCATTCACATGCACATTAAAACCAACAAAGATGTACTACTGTTaGCCATTCCAATATGTGCCC +
Preference number: 5 (lower is better)
Translates to: FRHKNRFSRPFTCTLKPTKMYYC*PFQYVP
Trigger: GGGCACATATTGGAATGGCAAACAGTAGTACATCTT...TGTTGGTTTTAATGTGCATGTGAATGGCCTAGAGAACCTATTTTTGTGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298307.10
CDS-3UTR CAA 90 bp TATGAAGCCTTAAGATCCAGAAGTGTTGTTACTACCAAACCTCTGATTAACACTTCATTACTGTGTGCCTaGGTTTTTCGGTATATGGAT +
Preference number: 5 (lower is better)
Translates to: YEALRSRSVVTTKPLINTSLLCA*VFRYMD
Trigger: ATCCATATACCGAAAAACCAAGGCACACAGTAATGA...AGTGTTAATCAGAGGTTTGGTAGTAACAACACTTCTGGATCTTAAGGCTTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555739.5
CDS CAA 72 bp CTGCAGGGAAGCGGTCCGCGTCGGGCCGGCTCCCTATaGCAGCCCGTCTGCCCCGCCTCCTGCAGTCCACGG +
Preference number: 6 (lower is better)
Translates to: LQGSGPRRAGSL*QPVCPASCSPR
Trigger: CCGTGGACTGCAGGAGGCGGGGCAGACGGGCTGCAATAGGGAGCCGGCCCGACGCGGACCGCTTCCCTGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555739.5
CDS TCA 72 bp TGTAGCCGCCCCAGACGAACATGTGGCGCCCGTCGCTaGCGGCTACGTGGCCGCTGCGCTCAGCGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: CSRPRRTCGARR*RLRGRCAQRGR
Trigger: CCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGACGGGCGCCACATGTTCGTCTGGGGCGGCTACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS GCA 72 bp AAGGCGGTGGCGAAAGGGACGGCGTTGAGGCCTCTCTaGCGCCTGCGCTCGCGTTTCCCAGCCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: KAVAKGTALRPL*RLRSRFPASSA
Trigger: GGCCGAGGAGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGCCGTCCCTTTCGCCACCGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS CAA 90 bp ACAGCGGCGCGAGGCAAGGAAAAGGCGGTGGCGAAAGGGACGGCGTaGAGGCCTCTCTGCCGCCTGCGCTCGCGTTTCCCAGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TAARGKEKAVAKGTA*RPLCRLRSRFPASS
Trigger: CGAGGAGGCTGGGAAACGCGAGCGCAGGCGGCAGAGAGGCCTCAACGCCGTCCCTTTCGCCACCGCCTTTTCCTTGCCTCGCGCCGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS CCA 72 bp CAGACGAACATGTGGCGCCCGTCGCTGACGGCTACGTaGCCGCTGCGCTCAGCGGGGCAGGCAAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: QTNMWRPSLTAT*PLRSAGQASSM
Trigger: CATGGAGCTTGCCTGCCCCGCTGAGCGCAGCGGCCACGTAGCCGTCAGCGACGGGCGCCACATGTTCGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS CCA 72 bp GCAGGCAAGCTCCATGGACTCATAGCTCTCGAAGGCTaGCCCAGGCAAGTCGTCAGCCCGCAGATCCTCGTT +
Preference number: 6 (lower is better)
Translates to: AGKLHGLIALEG*PRQVVSPQILV
Trigger: AACGAGGATCTGCGGGCTGACGACTTGCCTGGGCCAGCCTTCGAGAGCTATGAGTCCATGGAGCTTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS GCA 72 bp ACACACCGTCACCTTTCACACCCCAACCCTTCCGAATaGACCGCCCAAGCAACATTAACAGGGCCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: THRHLSHPNPSE*TAQATLTGPSP
Trigger: CGGGGAAGGCCCTGTTAATGTTGCTTGGGCGGTGCATTCGGAAGGGTTGGGGTGTGAAAGGTGACGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553538.5
CDS CCA 72 bp AACGCTCCAATGGCAACAACGGGGGTGGGAGTGAGTTaGCTTTGTGAGCACCAGGGTGACATGACAGCAGCC +
Preference number: 6 (lower is better)
Translates to: NAPMATTGVGVS*LCEHQGDMTAA
Trigger: GGCTGCTGTCATGTCACCCTGGTGCTCACAAAGCCAACTCACTCCCACCCCCGTTGTTGCCATTGGAGCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553538.5
CDS CAA 72 bp ATCCTCGTTGCCATCAGCCATCTTGAGGCTGCACTTTaGCTAACCAACAATGCCCACACCCGCGAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: ILVAISHLEAAL*LTNNAHTREGP
Trigger: TGGCCCCTCGCGGGTGTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCAACGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS TCA 72 bp CGTCAGCCCGCAGATCCTCGTTGCCATCAGCCATCTTaGGGCTGCACTTTTGCTAACCAACAATGCCCACAC +
Preference number: 6 (lower is better)
Translates to: RQPADPRCHQPS*GCTFANQQCPH
Trigger: GTGTGGGCATTGTTGGTTAGCAAAAGTGCAGCCTCAAGATGGCTGATGGCAACGAGGATCTGCGGGCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS TCA 72 bp GAAGTCCTCGTAGGCCGTCCTCATAACGCGTCTGAGTaGTATCACACACCGTCACCTTTCACACCCCAACCC +
Preference number: 6 (lower is better)
Translates to: EVLVGRPHNASE*YHTPSPFTPQP
Trigger: GGGTTGGGGTGTGAAAGGTGACGGTGTGTGATATCACTCAGACGCGTTATGAGGACGGCCTACGAGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553538.5
CDS CAA 72 bp ATCTGCCTCCAAACACGAAGCCTCTATTTCCGACAGTaGCACAGGCATGGGCAGCACGAGGTGAAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: ICLQTRSLYFRQ*HRHGQHEVKVL
Trigger: AAGCACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAGGCTTCGTGTTTGGAGGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS TCA 72 bp ATTTCCGACAGTTGCACAGGCATGGGCAGCACGAGGTaGAGGTGCTTTACCAGTAGTTATAGGCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: ISDSCTGMGSTR*RCFTSSYRLAP
Trigger: TGGAGCCAGCCTATAACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGTCGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS CCA 72 bp AACACGAAGCCTCTATTTCCGACAGTTGCACAGGCATaGGCAGCACGAGGTGAAGGTGCTTTACCAGTAGTT +
Preference number: 6 (lower is better)
Translates to: NTKPLFPTVAQA*AARGEGALPVV
Trigger: AACTACTGGTAAAGCACCTTCACCTCGTGCTGCCCATGCCTGTGCAACTGTCGGAAATAGAGGCTTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298307.10
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS TCA 72 bp GTACAGCACCCTGTCTACACACACAGCACAGCTTCCTaGCATAGAAGGAGGAACATCACCTTCAGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: VQHPVYTHSTAS*HRRRNITFSVD
Trigger: ATCAACACTGAAGGTGATGTTCCTCCTTCTATGTCAGGAAGCTGTGCTGTGTGTGTAGACAGGGTGCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298307.10
ENST00000553538.5
ENST00000553703.1
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000557247.1
CDS GCA 72 bp AAGTCATTGAAGTCGTTTGAATACTTACTCGATATCTaGCTCCAAACACGAAGCCTCTATTTCCGACAGTTG +
Preference number: 6 (lower is better)
Translates to: KSLKSFEYLLDI*LQTRSLYFRQL
Trigger: CAACTGTCGGAAATAGAGGCTTCGTGTTTGGAGGCAGATATCGAGTAAGTATTCAAACGACTTCAATGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
CDS CCA 72 bp ACACCAAGTTTGTCCTTTGATGATGGAGGAATTCCTTaGCAATCAATTCTTTCCCACTGTAACACTCTGTCT +
Preference number: 6 (lower is better)
Translates to: TPSLSFDDGGIP*QSILSHCNTLS
Trigger: AGACAGAGTGTTACAGTGGGAAAGAATTGATTGCCAAGGAATTCCTCCATCATCAAAGGACAAACTTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298307.10
ENST00000553538.5
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1
CDS TCA 72 bp AGTAAGTCCAGGCATCACCTGATTCAAGCAAAGAAATaGAGTATGTTAGTCTGTCAATATGACATTGACATT +
Preference number: 6 (lower is better)
Translates to: SKSRHHLIQAKK*SMLVCQYDIDI
Trigger: AATGTCAATGTCATATTGACAGACTAACATACTTCATTTCTTTGCTTGAATCAGGTGATGCCTGGACTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553579.1
CDS CAA 72 bp AATATTAACTTGTTTTTATATACCCAGACACCAAGTTaGTCCTTTGATGATGGAGGAATTCCTTGGCAATCA +
Preference number: 6 (lower is better)
Translates to: NINLFLYTQTPS*SFDDGGIPWQS
Trigger: TGATTGCCAAGGAATTCCTCCATCATCAAAGGACAAACTTGGTGTCTGGGTATATAAAAACAAGTTAATATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298307.10
ENST00000553538.5
ENST00000554589.5
ENST00000555443.5
ENST00000555739.5
ENST00000556559.5
ENST00000557063.5
ENST00000557247.1