RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000118263

Ensembl transcript IDs: ENST00000309446.11, ENST00000412414.6, ENST00000421199.5, ENST00000423015.5, ENST00000435602.1, ENST00000451244.1, ENST00000457962.5, ENST00000458272.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATGCTaGGGCGACACCACCAGCTGGGTTCTCTACCTTCCTCCTTACTGG +
Preference number: 1 (lower is better)
Translates to: VNDTTSLGESLSSGC*GDTTSWVLYLPPYW
Trigger: CCAGTAAGGAGGAAGGTAGAGAACCCAGCTGGTGGTGTCGCCTCAGCATCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 90 bp ATCTCTTTTTCTGGACATAATACTCATTACCACCAGGCATTGAGCTaGGCCATTAACCATGGGTGGGGCAGGAGGCCAGTAGCTAGGAGC +
Preference number: 1 (lower is better)
Translates to: ISFSGHNTHYHQALS*AINHGWGRRPVARS
Trigger: GCTCCTAGCTACTGGCCTCCTGCCCCACCCATGGTTAATGGCTCAGCTCAATGCCTGGTGGTAATGAGTATTATGTCCAGAAAAAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTaGGAGCATATATACCACCCTCATTATGCTGACGTGGGGTCCATC +
Preference number: 1 (lower is better)
Translates to: FPSVKVRQVHMRMSR*EHIYHPHYADVGSI
Trigger: GATGGACCCCACGTCAGCATAATGAGGGTGGTATATATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CCA 90 bp GCATGTCTAGGTGCGAGCATATATACCACCCTCATTATGCTGACGTaGGGTCCATCTTATGGCAGTAGACAGAAGCTGGACTCACAGCAA +
Preference number: 1 (lower is better)
Translates to: ACLGASIYTTLIMLT*GPSYGSRQKLDSQQ
Trigger: TTGCTGTGAGTCCAGCTTCTGTCTACTGCCATAAGATGGACCCCACGTCAGCATAATGAGGGTGGTATATATGCTCGCACCTAGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CCA 90 bp ATCAAAGATGTACAAAGGGCACAAGAGGTGCAGGTGGAGAGGAGATaGCGTCGAGAGAAGAGGATATTTGAAGGGCTTTGCAAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: IKDVQRAQEVQVERR*RREKRIFEGLCKGK
Trigger: CTTTCCCTTGCAAAGCCCTTCAAATATCCTCTTCTCTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTTGTACATCTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 90 bp TTCTCACAGTCAACAAATGACTCTGAAGCAAGCAAGCACCACCATTaGGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGGAGCAGATTA +
Preference number: 1 (lower is better)
Translates to: FSQSTNDSEASKHHH*VSMHPAPRKVRSRL
Trigger: TAATCTGCTCCTGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTTCAGAGTCATTTGTTGACTGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp TTCTTGGAAAACCTGCTCGCTCTAGCGGCTCTTAGTAACCATCTCTaGCACTGCAGAGGTGATGGACGTTTTATTACAAATCCATTTCCA +
Preference number: 1 (lower is better)
Translates to: FLENLLALAALSNHL*HCRGDGRFITNPFP
Trigger: TGGAAATGGATTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCGCTAGAGCGAGCAGGTTTTCCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp TCAGGCAGTTCGTCGTGGGAGGTCACGTTATTTACAAGAAGTTTCTaGTTCCTTTCACACATTTCTGTTGTTCCATCTCAAGTATTCCCA +
Preference number: 1 (lower is better)
Translates to: SGSSSWEVTLFTRSF*FLSHISVVPSQVFP
Trigger: TGGGAATACTTGAGATGGAACAACAGAAATGTGTGAAAGGAAGCAGAAACTTCTTGTAAATAACGTGACCTCCCACGACGAACTGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp AAAGGAATGTCTCCTTACAGCCAACTCTGTGTTCCACCTAAAGGATaGAGTTTCCATCAGCTCTTAGGGACTGATAAATCTGTCTTTTCC +
Preference number: 1 (lower is better)
Translates to: KGMSPYSQLCVPPKG*SFHQLLGTDKSVFS
Trigger: GGAAAAGACAGATTTATCAGTCCCTAAGAGCTGATGGAAACTGCATCCTTTAGGTGGAACACAGAGTTGGCTGTAAGGAGACATTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451244.1
3UTR TCA 90 bp TTCCCAAAGATCCTCACTGAGGAAAGTAGGCCATCAAAGAGACATTaGTGTATACTCAGGATAGGCCCTCTAGTTTTCAAACTGAGATAT +
Preference number: 1 (lower is better)
Translates to: FPKILTEESRPSKRH*CILRIGPLVFKLRY
Trigger: ATATCTCAGTTTGAAAACTAGAGGGCCTATCCTGAGTATACATCAATGTCTCTTTGATGGCCTACTTTCCTCAGTGAGGATCTTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp CCCCTTGAAGAAATAAACTCAGTGACCCTTATTTGGGCATTGAGCTaGCTCAATGAAACTATAAAATACACACATACGCACACACACACA +
Preference number: 1 (lower is better)
Translates to: PLEEINSVTLIWALS*LNETIKYTHTHTHT
Trigger: TGTGTGTGTGTGCGTATGTGTGTATTTTATAGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGAGTTTATTTCTTCAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 90 bp AGAAATAAACTCAGTGACCCTTATTTGGGCATTGAGCTGCCTCAATaGAACTATAAAATACACACATACGCACACACACACACAACTTCC +
Preference number: 1 (lower is better)
Translates to: RNKLSDPYLGIELPQ*NYKIHTYAHTHTTS
Trigger: GGAAGTTGTGTGTGTGTGTGCGTATGTGTGTATTTTATAGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGAGTTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 90 bp CAAAGGAAAGCTTCCAGGAGTAAATTTCAATCAGGTTCTATTTACTaGATGTTCATTTTGGCAATGTTCTGGGTGCAAAATTGTAGCCAG +
Preference number: 1 (lower is better)
Translates to: QRKASRSKFQSGSIY*MFILAMFWVQNCSQ
Trigger: CTGGCTACAATTTTGCACCCAGAACATTGCCAAAATGAACATTCAGTAAATAGAACCTGATTGAAATTTACTCCTGGAAGCTTTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 90 bp AATCAGGTTCTATTTACTGAATGTTCATTTTGGCAATGTTCTGGGTaGAAAATTGTAGCCAGAAATGCTGGCCCTCTTAAGATTTCAAAA +
Preference number: 1 (lower is better)
Translates to: NQVLFTECSFWQCSG*KIVARNAGPLKISK
Trigger: TTTTGAAATCTTAAGAGGGCCAGCATTTCTGGCTACAATTTTGCACCCAGAACATTGCCAAAATGAACATTCAGTAAATAGAACCTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACAATGGGTCCCCGCCTaGAGTCCAGCCCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGQWVPA*SPAPCL
Trigger: GAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATTG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACAATGGGTCCCCGCCTaGAGTCCAGCCCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKQWVPA*SPAPCL
Trigger: GAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAAAGGGCACAAGAGGTaGAGGTGGAGAGGAGATGGC +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGKGHKR*RWRGDG
Trigger: GCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACCACCCTCATTATGCTaGCGTGGGGTCCATCTTATG +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGPPSLC*RGVHLM
Trigger: CATAAGATGGACCCCACGTCAGCATAATGAGGGTGG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGGCTGCTTCGAGAGCTaGACATCCAGGTGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHGCFES*TSRCRE
Trigger: CTCTCGGCACCTGGATGTCCAGCTCTCGAAGCAGCC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCCCAACTCTTGCGCTTaGCAGGTGGCCACTTCCCGA +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHPNSCA*QVATSR
Trigger: TCGGGAAGTGGCCACCTGCCAAGCGCAAGAGTTGGG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGGCTGCTTCGAGAGCTaGACATCCAGGTGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKGCFES*TSRCRE
Trigger: CTCTCGGCACCTGGATGTCCAGCTCTCGAAGCAGCC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGCCATTAACCATGGGTaGGGCAGGAGGCCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHAINHG*GRRPVA
Trigger: AGCTACTGGCCTCCTGCCCCACCCATGGTTAATGGC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCACAAGAGGTGCAGGTaGAGAGGAGATGGCGTCGAG +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHHKRCR*RGDGVE
Trigger: CTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGATATTAGGCACTGGTaGCTACTCCTCCGAAACGTC +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGDIRHW*LLLRNV
Trigger: GACGTTTCGGAGGAGTAGCCACCAGTGCCTAATATC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCAATGGGTCCCCGCCTaGAGTCCAGCCCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: VCICVCVCVCVQRFISENQWVPA*SPAPCL
Trigger: GAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
ENST00000423015.5
ENST00000458272.1
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAATTACCACCAGGCATTaGGCTGAGCCATTAACCATG +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGITTRH*AEPLTM
Trigger: CATGGTTAATGGCTCAGCTCAATGCCTGGTGGTAAT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAACCATCTCTGCCACTaGAGAGGTGATGGACGTTTT +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGNHLCH*RGDGRF
Trigger: AAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAATGTTCCGAATGCACTaGAAGAGCCATCCAAAAGCC +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGMFRMH*KSHPKA
Trigger: GGCTTTTGGATGGCTCTTCCAGTGCATTCGGAACAT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAGGAAATGGTCAGCATaGAGTTCATTTTGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGRKWSA*SSFWGL
Trigger: GAGACCCCAAAATGAACTTCATGCTGACCATTTCCT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATCTCTTCTCTGGGTCTaGAGCTGCTTGTATTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGSLLWV*SCLYFH
Trigger: ATGGAAATACAAGCAGCTTCAGACCCAGAGAAGAGA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGTGGAACTCCCAGTGTaGTTTCGATATACTGGCAAT +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGVELPV*FRYTGN
Trigger: ATTGCCAGTATATCGAAACCACACTGGGAGTTCCAC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACAGTCAACAGTTCTGTaGGGAAGTCTGACGCACGGA +
Preference number: 2 (lower is better)
Translates to: KQASTTIEFQCTLLQERSQSTVL*GSLTHG
Trigger: TCCGTGCGTCAGACTTCCTCACAGAACTGTTGACTG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAGCAAGCACCACCATTaGGTTTCAATGCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHSKHHH*VSMHPA
Trigger: AGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACTACATGAACAAATCTaGACCCTGGATAAAAGCGTG +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLHEQI*TLDKSV
Trigger: CACGCTTTTATCCAGGGTTCAGATTTGTTCATGTAG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CAA 90 bp CTCTCTTCTCTGGGTCTGAAGCTGCTTGTATTTCCATCTAGTTTTTaGTACTCTCCACAGCCAGCTGGATTTCCTGGCTTCCGGTTACCC +
Preference number: 2 (lower is better)
Translates to: LSSLGLKLLVFPSSF*YSPQPAGFPGFRLP
Trigger: GGGTAACCGGAAGCCAGGAAATCCAGCTGGCTGTGGAGAGTACAAAAAACTAGATGGAAATACAAGCAGCTTCAGACCCAGAGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATTTCTCTCTCTGTTTTTaGCACCTGTTTCCCGAGGAC +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHFSLCF*HLFPED
Trigger: GTCCTCGGGAAACAGGTGTCAAAAACAGAGAGAGAA...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCTTAGTAACCATCTCTaGCACTGCAGAGGTGATGGA +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHLSNHL*HCRGDG
Trigger: TCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAGGCAATGTTCCGAATaGACTGGAAGAGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHRQCSE*TGRAIQ
Trigger: TTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCGATGTCCCATCTGACTaGCTGCTTCGAGAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSDVPSD*LLRELD
Trigger: GTCCAGCTCTCGAAGCAGCCAGTCAGATGGGACATC...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAAATCGTGGTGGCCATaGCTTAATGCCATCACTGGC +
Preference number: 2 (lower is better)
Translates to: KQASTTIEFQCTLLQERSKSWWP*LNAITG
Trigger: GCCAGTGATGGCATTAAGCCATGGCCACCACGATTT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAAAATCGTGGTGGCCATaGCTTAATGCCATCACTGGC +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKKSWWP*LNAITG
Trigger: GCCAGTGATGGCATTAAGCCATGGCCACCACGATTT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCCCCTCCCCGCTATGTaGAACTCCCAGTGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAPLPAM*NSQCGF
Trigger: GAAACCACACTGGGAGTTCCACATAGCGGGGAGGGG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCAGTCAACAGTTCTGTaGGGAAGTCTGACGCACGGA +
Preference number: 2 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSQSTVL*GSLTHG
Trigger: TCCGTGCGTCAGACTTCCTCACAGAACTGTTGACTG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCTGCCACTGCAGAGGTaGTGGACGTTTTATTACAAA +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHLPLQR*WTFYYK
Trigger: TTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAAAGGGCACAAGAGGTaGAGGTGGAGAGGAGATGGC +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAKGHKR*RWRGDG
Trigger: GCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACCTAATACAACCTTTTaGTTTCCCTTTCTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGPNTTF*FPFLQE
Trigger: TTCTTGGAGAAAGGGAAAGCAAAAGGTTGTATTAGG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGATAGAGACCACTACTaGATGTGTGAGTGTGGCATG +
Preference number: 2 (lower is better)
Translates to: KQASTTIEFQCTLLQERSDRDHY*MCECGM
Trigger: CATGCCACACTCACACATCCAGTAGTGGTCTCTATC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAACAAATCTGAACCCTaGATAAAAGCGTGCTTGTTA +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGNKSEP*IKACLL
Trigger: TAACAAGCACGCTTTTATCCAGGGTTCAGATTTGTT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATTAGCAAGGAGATCTTaGCCATTAACAGGTGTATTT +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLARRS*PLTGVF
Trigger: AAATACACCTGTTAATGGCCAAGATCTCCTTGCTAA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAGAGGGAGCCCTGTTTaGAAAGAATATCTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHRGSPV*KEYLVW
Trigger: CCAAACAAGATATTCTTTTCAAACAGGGCTCCCTCT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAACCATTGAGTTTCAATaGACCCTGCTCCAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKTIEFQ*TLLQER
Trigger: CCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATTAGACATTTATTTTTaGCTCTGTGTTAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLDIYF*LCVSKE
Trigger: CTCCTTGCTAACACAGAGGCAAAAATAAATGTCTAA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAATAACCAGTCCTCTTaGGAGCAAAATGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHNNQSS*EQNVFR
Trigger: CCTGAAGACATTTTGCTCCCAAGAGGACTGGTTATT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATTTTGTTCTTGCAACTTaGGTTTCTTTTGGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHFVLAT*VSFGFA
Trigger: GGCAAAGCCAAAAGAAACTCAAGTTGCAAGAACAAA...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAAAGGGCCTTTGTTCTaGCACATTCAAATGAGACCA +
Preference number: 2 (lower is better)
Translates to: KQASTTIEFQCTLLQERSKGPLF*HIQMRP
Trigger: TGGTCTCATTTGAATGTGGCAGAACAAAGGCCCTTT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCCCTGGATAAAAGCGTaGTTGTTAGGACACCACCAG +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAPWIKA*LLGHHQ
Trigger: CTGGTGGTGTCCTAACAAGCACGCTTTTATCCAGGG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATATCTTTATCTTACTTTaGCTACCTTCTTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHIFILL*LPSSCS
Trigger: GGAGCAGGAAGAAGGTAGGCAAAGTAAGATAAAGAT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTACGACAGGTACATATaGGCATGTCTAGGTGCGAGC +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAYDRYI*ACLGAS
Trigger: GCTCGCACCTAGACATGCGCATATGTACCTGTCGTA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACAAAATGATCAGGACTaGTCATCATTCACAGGTGTC +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKQNDQD*SSFTGV
Trigger: GACACCTGTGAATGATGACCAGTCCTGATCATTTTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATATTTTGGCAATGTTCTaGGTGCAAAATTGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHILAMF*VQNCSQ
Trigger: CTGGCTACAATTTTGCACCCAGAACATTGCCAAAAT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTCTGCTAATCAGGCATaGGGTTGGCTGTCCTTTTAC +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASANQA*GWLSFY
Trigger: GTAAAAGGACAGCCAACCTCATGCCTGATTAGCAGA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGATAGAGACCACTACTaGATGTGTGAGTGTGGCATG +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFADRDHY*MCECGM
Trigger: CATGCCACACTCACACATCCAGTAGTGGTCTCTATC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGCAGTAGACAGAAGCTaGACTCACAGCAAGTTACGA +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAAVDRS*THSKLR
Trigger: TCGTAACTTGCTGTGAGTCCAGCTTCTGTCTACTGC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCTCATTATGCTGACGTaGGGTCCATCTTATGGCAGT +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFALIMLT*GPSYGS
Trigger: ACTGCCATAAGATGGACCCCACGTCAGCATAATGAG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CAA 90 bp CACCACCGTATCCACTTCTGTAAGTCCAAAGAATGCAAAGAAAGCTaGACTACTGCTGTGTCCCATGTGACAAATGTGTTTTACTGCTGT +
Preference number: 2 (lower is better)
Translates to: HHRIHFCKSKECKES*TTAVSHVTNVFYCC
Trigger: ACAGCAGTAAAACACATTTGTCACATGGGACACAGCAGTAGTCAAGCTTTCTTTGCATTCTTTGGACTTACAGAAGTGGATACGGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAAGAGAGAGAAATTACTaGACATTTCAGACACTGATG +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKRERNY*TFQTLM
Trigger: CATCAGTGTCTGAAATGTTCAGTAATTTCTCTCTCT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAAATCCATTTCCAAAATaGTCAGGACTGGTCATCATT +
Preference number: 2 (lower is better)
Translates to: AGIKARGNVPNALEEPSKNPFPK*SGLVII
Trigger: AATGATGACCAGTCCTGATCATTTTGGAAATGGATT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCAAAGGGCCTTTGTTCTaGCACATTCAAATGAGACCA +
Preference number: 2 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSKGPLF*HIQMRP
Trigger: TGGTCTCATTTGAATGTGGCAGAACAAAGGCCCTTT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CAA 90 bp GCGTTCCAATTCAAGGCATGTCTGTGTCATCTACTGTCCTTCCTTTaGTTCAAGACAACAAAAACAAAGGAATGTCTCCTTACAGCCAAC +
Preference number: 2 (lower is better)
Translates to: AFQFKACLCHLLSFL*FKTTKTKECLLTAN
Trigger: GTTGGCTGTAAGGAGACATTCCTTTGTTTTTGTTGTCTTGAACAAAAGGAAGGACAGTAGATGACACAGACATGCCTTGAATTGGAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451244.1
3UTR-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTATATTTGAAGGGCTTTaGAAGGGAAAGCACACAGAG +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAIFEGL*KGKHTE
Trigger: CTCTGTGTGCTTTCCCTTGCAAAGCCCTTCAAATAT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAATAACCAGTCCTCTTaGGAGCAAAATGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFANNQSS*EQNVFR
Trigger: CCTGAAGACATTTTGCTCCCAAGAGGACTGGTTATT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTACAAAGGACCTCACTaGTACAAAAGAGAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSYKGPH*YKRERN
Trigger: ATTTCTCTCTCTTTTGTATCAGTGAGGTCCTTTGTA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTATCTTTATCTTACTTTaGCTACCTTCTTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAIFILL*LPSSCS
Trigger: GGAGCAGGAAGAAGGTAGGCAAAGTAAGATAAAGAT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAGAGAGAGAAATTACTaGACATTTCAGACACTGATG +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFARERNY*TFQTLM
Trigger: CATCAGTGTCTGAAATGTTCAGTAATTTCTCTCTCT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTACAAAGGACCTCACTaGTACAAAAGAGAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAYKGPH*YKRERN
Trigger: ATTTCTCTCTCTTTTGTATCAGTGAGGTCCTTTGTA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAATGCAGCTTTGTCATaGAATCTGAACATCTCTTTT +
Preference number: 2 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFANAALS*NLNISF
Trigger: AAAAGAGATGTTCAGATTCCATGACAAAGCTGCATT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp ACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATGCTaGGGCGACACCACCAGCTGGGTTCTCTACCTTCCT +
Preference number: 3 (lower is better)
Translates to: TTSLGESLSSGC*GDTTSWVLYLP
Trigger: AGGAAGGTAGAGAACCCAGCTGGTGGTGTCGCCTCAGCATCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACCAGACACCCTGAATTaGAGTCCTCCCCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGPDTLN*SPPLLP
Trigger: GGGCAGGAGGGGAGGACTCAAATTCAGGGTGTCTGG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACTTCAGGACCTAGGTTaGCAGAAATCGTTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLQDLG*QKSFCL
Trigger: GAGGCAGAACGATTTCTGCAAACCTAGGTCCTGAAG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CCA 72 bp GTACAAAGGGCACAAGAGGTGCAGGTGGAGAGGAGATaGCGTCGAGAGAAGAGGATATTTGAAGGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: VQRAQEVQVERR*RREKRIFEGLC
Trigger: GCAAAGCCCTTCAAATATCCTCTTCTCTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAACCCTTATTTGGGCATaGAGCTGCCTCAATGAAACT +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGTLIWA*SCLNET
Trigger: AGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGGT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp TCTGGACATAATACTCATTACCACCAGGCATTGAGCTaGGCCATTAACCATGGGTGGGGCAGGAGGCCAGTA +
Preference number: 3 (lower is better)
Translates to: SGHNTHYHQALS*AINHGWGRRPV
Trigger: TACTGGCCTCCTGCCCCACCCATGGTTAATGGCTCAGCTCAATGCCTGGTGGTAATGAGTATTATGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CCA 72 bp GGTGCGAGCATATATACCACCCTCATTATGCTGACGTaGGGTCCATCTTATGGCAGTAGACAGAAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: GASIYTTLIMLT*GPSYGSRQKLD
Trigger: GTCCAGCTTCTGTCTACTGCCATAAGATGGACCCCACGTCAGCATAATGAGGGTGGTATATATGCTCGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATTTTTCCTTTCAAATTaGGGATCCCCTGGAGGGTTA +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGFFLSN*GSPGGL
Trigger: TAACCCTCCAGGGGATCCCAAATTTGAAAGGAAAAA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGAGAGGGAGCCCTGTTaGAAAAGAATATCTTGTTTG +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGEREPC*KRISCL
Trigger: CAAACAAGATATTCTTTTCAAACAGGGCTCCCTCTC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGTTAGCAAGGAGATCTaGGCCATTAACAGGTGTATT +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGVSKEI*AINRCI
Trigger: AATACACCTGTTAATGGCCAAGATCTCCTTGCTAAC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGCAAATGGACAGATTTaGTGTGTGTGTGCGCGTGTG +
Preference number: 3 (lower is better)
Translates to: KQASTTIEFQCTLLQERSANGQI*CVCARV
Trigger: CACACGCGCACACACACACAAAATCTGTCCATTTGC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACCATTTCTTTCCCCTTaGATGCAAATAGACATGGAT +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGPFLSP*MQIDMD
Trigger: ATCCATGTCTATTTGCATCAAAGGGGAAAGAAATGG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp TTCTACATGAACAAATCTGAACCCTGGATAAAAGCGTaGTTGTTAGGACACCACCAGAAACACCAGGCCGGG +
Preference number: 3 (lower is better)
Translates to: FYMNKSEPWIKA*LLGHHQKHQAG
Trigger: CCCGGCCTGGTGTTTCTGGTGGTGTCCTAACAAGCACGCTTTTATCCAGGGTTCAGATTTGTTCATGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp GTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTaGGAGCATATATACCACCCTCATTATGCTGACGTG +
Preference number: 3 (lower is better)
Translates to: VKVRQVHMRMSR*EHIYHPHYADV
Trigger: CACGTCAGCATAATGAGGGTGGTATATATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp CAAAGCCTTCAGGACCTAGGTTTGCAGAAATCGTTCTaGCTCCAGTCCAAAGGCCTAGGTTTAAAATGTCCC +
Preference number: 3 (lower is better)
Translates to: QSLQDLGLQKSF*LQSKGLGLKCP
Trigger: GGGACATTTTAAACCTAGGCCTTTGGACTGGAGGCAGAACGATTTCTGCAAACCTAGGTCCTGAAGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CCA 72 bp CAATCAAAGATGTACAAAGGGCACAAGAGGTGCAGGTaGAGAGGAGATGGCGTCGAGAGAAGAGGATATTTG +
Preference number: 3 (lower is better)
Translates to: QSKMYKGHKRCR*RGDGVERRGYL
Trigger: CAAATATCCTCTTCTCTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTTGTACATCTTTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAAGGACCAAAGGGCCTTaGTTCTGCCACATTCAAATG +
Preference number: 3 (lower is better)
Translates to: AGIKARGNVPNALEEPSKRTKGP*FCHIQM
Trigger: CATTTGAATGTGGCAGAACAAAGGCCCTTTGGTCCT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATTCTTCAGGTTACTTCTaGGAAAACCTGCTCGCTCTA +
Preference number: 3 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHSSGYF*ENLLAL
Trigger: TAGAGCGAGCAGGTTTTCCAAGAAGTAACCTGAAGA...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATACAAAAATGCAGCTTaGTCATGGAATCTGAACATC +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGYKNAA*SWNLNI
Trigger: GATGTTCAGATTCCATGACAAAGCTGCATTTTTGTA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATATGTAAGTACCCACTaGCGTCTTTCGAAGATTTTT +
Preference number: 3 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGYVSTH*RLSKIF
Trigger: AAAAATCTTCGAAAGACGCAAGTGGGTACTTACATA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATGGATAAAAGCGTGCTaGTTAGGACACCACCAGAAA +
Preference number: 3 (lower is better)
Translates to: AGIKARGNVPNALEEPSKWIKAC*LGHHQK
Trigger: TTTCTGGTGGTGTCCTAACAAGCACGCTTTTATCCA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp AACCTGCTCGCTCTAGCGGCTCTTAGTAACCATCTCTaGCACTGCAGAGGTGATGGACGTTTTATTACAAAT +
Preference number: 3 (lower is better)
Translates to: NLLALAALSNHL*HCRGDGRFITN
Trigger: ATTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCGCTAGAGCGAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGCAAATGGACAGATTTaGTGTGTGTGTGCGCGTGTG +
Preference number: 3 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAANGQI*CVCARV
Trigger: CACACGCGCACACACACACAAAATCTGTCCATTTGC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAAGCAAGCACCACCATaGAGTTTCAATGCACCCTGC +
Preference number: 3 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAKQAPP*SFNAPC
Trigger: GCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp CTCGCTCTAGCGGCTCTTAGTAACCATCTCTGCCACTaGAGAGGTGATGGACGTTTTATTACAAATCCATTT +
Preference number: 3 (lower is better)
Translates to: LALAALSNHLCH*RGDGRFITNPF
Trigger: AAATGGATTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCGCTAGAGCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp TTTCAGACACTGATGAGGACCAAAGGGCCTTTGTTCTaGCACATTCAAATGAGACCACAGATGAAAATAGGG +
Preference number: 3 (lower is better)
Translates to: FQTLMRTKGPLF*HIQMRPQMKIG
Trigger: CCCTATTTTCATCTGTGGTCTCATTTGAATGTGGCAGAACAAAGGCCCTTTGGTCCTCATCAGTGTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp AAATGCAGGAATAAAGGCAAGAGGCAATGTTCCGAATaGACTGGAAGAGCCATCCAAAAGCCCCATTTCTTT +
Preference number: 3 (lower is better)
Translates to: KCRNKGKRQCSE*TGRAIQKPHFF
Trigger: AAAGAAATGGGGCTTTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp TCTCCTTACAGCCAACTCTGTGTTCCACCTAAAGGATaGAGTTTCCATCAGCTCTTAGGGACTGATAAATCT +
Preference number: 3 (lower is better)
Translates to: SPYSQLCVPPKG*SFHQLLGTDKS
Trigger: AGATTTATCAGTCCCTAAGAGCTGATGGAAACTGCATCCTTTAGGTGGAACACAGAGTTGGCTGTAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451244.1
3UTR CCA 72 bp TTCTCTACCTTCCTCCTTACTGGTGATGCTCTTTCCTaGAAGTCGTGTGTGGCAGAGATTTTAGTACTTTTC +
Preference number: 3 (lower is better)
Translates to: FSTFLLTGDALS*KSCVAEILVLF
Trigger: GAAAAGTACTAAAATCTCTGCCACACACGACTTCCAGGAAAGAGCATCACCAGTAAGGAGGAAGGTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp CTCAGTGACCCTTATTTGGGCATTGAGCTGCCTCAATaGAACTATAAAATACACACATACGCACACACACAC +
Preference number: 3 (lower is better)
Translates to: LSDPYLGIELPQ*NYKIHTYAHTH
Trigger: GTGTGTGTGTGCGTATGTGTGTATTTTATAGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACAATGGCGTTTTAAATaGTGTATTGTAACACGTAGG +
Preference number: 3 (lower is better)
Translates to: RLLVTISATAEVMDVLLQQWRFK*CIVTRR
Trigger: CCTACGTGTTACAATACACAATTTAAAACGCCATTG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGAGAGGGAGCCCTGTTaGAAAAGAATATCTTGTTTG +
Preference number: 3 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAEREPC*KRISCL
Trigger: CAAACAAGATATTCTTTTCAAACAGGGCTCCCTCTC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp ATCCTCACTGAGGAAAGTAGGCCATCAAAGAGACATTaGTGTATACTCAGGATAGGCCCTCTAGTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: ILTEESRPSKRH*CILRIGPLVFK
Trigger: TTTGAAAACTAGAGGGCCTATCCTGAGTATACATCAATGTCTCTTTGATGGCCTACTTTCCTCAGTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp TCGTCGTGGGAGGTCACGTTATTTACAAGAAGTTTCTaGTTCCTTTCACACATTTCTGTTGTTCCATCTCAA +
Preference number: 3 (lower is better)
Translates to: SSWEVTLFTRSF*FLSHISVVPSQ
Trigger: TTGAGATGGAACAACAGAAATGTGTGAAAGGAAGCAGAAACTTCTTGTAAATAACGTGACCTCCCACGACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR-3UTR CAA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCAATGGCGTTTTAAATaGTGTATTGTAACACGTAGG +
Preference number: 3 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSQWRFK*CIVTRR
Trigger: CCTACGTGTTACAATACACAATTTAAAACGCCATTG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp GGTGATGGACGTTTTATTACAAATCCATTTCCAAAATaGTCAGGACTGGTCATCATTCACAGGTGTCAACTC +
Preference number: 3 (lower is better)
Translates to: GDGRFITNPFPK*SGLVIIHRCQL
Trigger: GAGTTGACACCTGTGAATGATGACCAGTCCTGATCATTTTGGAAATGGATTTGTAATAAAACGTCCATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp CAACAAAGAACATTATCAACCTTCCCTCATGACCACTaGGAGGGAGCCCTGTTTGAAAAGAATATCTTGTTT +
Preference number: 3 (lower is better)
Translates to: QQRTLSTFPHDH*EGALFEKNILF
Trigger: AAACAAGATATTCTTTTCAAACAGGGCTCCCTCTCAGTGGTCATGAGGGAAGGTTGATAATGTTCTTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR GCA 72 bp CTATTTACTGAATGTTCATTTTGGCAATGTTCTGGGTaGAAAATTGTAGCCAGAAATGCTGGCCCTCTTAAG +
Preference number: 3 (lower is better)
Translates to: LFTECSFWQCSG*KIVARNAGPLK
Trigger: CTTAAGAGGGCCAGCATTTCTGGCTACAATTTTGCACCCAGAACATTGCCAAAATGAACATTCAGTAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR TCA 72 bp TTCATAATCTCCAACAATTGGCTCCCTTTTTCCCCTTaGAGAAATAAACTCAGTGACCCTTATTTGGGCATT +
Preference number: 3 (lower is better)
Translates to: FIISNNWLPFSP*RNKLSDPYLGI
Trigger: AATGCCCAAATAAGGGTCACTGAGTTTATTTCTTCAAGGGGAAAAAGGGAGCCAATTGTTGGAGATTATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CAA 72 bp GGAAGTTGTGTGGGAGTAGGAAGTGGGAGAAGGAGCTaGACGCGGGGGCGGGTGGGGGCTTGTGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSCVGVGSGRRS*TRGRVGACGKE
Trigger: TTCCTTTCCACAAGCCCCCACCCGCCCCCGCGTCAAGCTCCTTCTCCCACTTCCTACTCCCACACAACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCAATGGGTCCCCGCCTaGAGTCCAGCCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHQWVPA*SPAPCL
Trigger: GAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATTG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCGTCCATGCTGCTGCTaGCGGGCAAAACGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHRPCCC*RAKREA
Trigger: CGCCTCCCGTTTTGCCCGGCAGCAGCAGCATGGACG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGCGGGTGGGGGCTTGTaGAAAGGAAGGGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHAGGGL*KGRGGF
Trigger: GAAGCCTCCCCTTCCTTTCCACAAGCCCCCACCCGC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACTCTCGGGGAATCGCTaGGCTCGGGATGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQLSGNR*ARDAEA
Trigger: CGCCTCAGCATCCCGAGCTCAGCGATTCCCCGAGAG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAGCCGTCACGGCTGCTaGAGCTGTTGCGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQSRHGC*SCCDPS
Trigger: GGAGGGGTCGCAACAGCTGCAGCAGCCGTGACGGCT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCGCAGCCGTCACGGCTaGTGCAGCTGTTGCGACCCC +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSRSRHG*CSCCDP
Trigger: GGGGTCGCAACAGCTGCAGCAGCCGTGACGGCTGCG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACAGGTGGAGAGGAGATaGCGTCGAGAGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGQVERR*RREKRI
Trigger: TATCCTCTTCTCTCGACGCCATCTCCTCTCCACCTG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGCGGGTGGGGGCTTGTaGAAAGGAAGGGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKAGGGL*KGRGGF
Trigger: GAAGCCTCCCCTTCCTTTCCACAAGCCCCCACCCGC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGCCAGCTGGATTTCCTaGCTTCCGGTTACCCATTTC +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGASWIS*LPVTHF
Trigger: GAAATGGGTAACCGGAAGCCAGGAAATCCAGCTGGC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGGGATGCAAACTCACTaGCACGAAGCTGCCATCTAT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGGMQTH*HEAAIY
Trigger: ATAGATGGCAGCTTCGTGTCAGTGAGTTTGCATCCC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCTCTCGGGGAATCGCTaGGCTCGGGATGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSLSGNR*ARDAEA
Trigger: CGCCTCAGCATCCCGAGCTCAGCGATTCCCCGAGAG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATACAGTGCAGACGACTaGCAGGAAAAGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGYSADD*QEKGTS
Trigger: AGAAGTCCCCTTTTCCTGGCAGTCGTCTGCACTGTA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp TCTCCTTACAGCCAACTCTGTGTTCCACCTAAAGGATGCAGTTTCCATCAGCTCACACGTCCATGCTGCTaGTGCCGGGCAAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: SPYSQLCVPPKGCSFHQLTRPCC*CRAKRE
Trigger: CTCCCGTTTTGCCCGGCAGCAGCAGCATGGACGTGT...GAGCTGATGGAAACTGCATCCTTTAGGTGGAACACAGAGTTGGCTGTAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCGCAGCCGTCACGGCTaGTGCAGCTGTTGCGACCCC +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFARSRHG*CSCCDP
Trigger: GGGGTCGCAACAGCTGCAGCAGCCGTGACGGCTGCG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACCCTGGATAAAAGCGTaGTTGTTAGGACACCACCAG +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGPWIKA*LLGHHQ
Trigger: CTGGTGGTGTCCTAACAAGCACGCTTTTATCCAGGG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGGGGGAGGGGAAGCGTaGAGGAAACAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSGGGEA*RKQSKS
Trigger: GGACTTGGACTGTTTCCTCCACGCTTCCCCTCCCCC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGGGGGAGGGGAAGCGTaGAGGAAACAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKGGGEA*RKQSKS
Trigger: GGACTTGGACTGTTTCCTCCACGCTTCCCCTCCCCC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGGCGACACCACCAGCTaGGTTCTCTACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHGDTTS*VLYLPP
Trigger: AGGAGGAAGGTAGAGAACCCAGCTGGTGGTGTCGCC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACAATTCAAGGCATGTTaGCCAAGACGGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGQFKAC*PRREHA
Trigger: GGCATGTTCCCGTCTTGGCCAACATGCCTTGAATTG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412414.6
3UTR CAA 72 bp CCAGCCAATAAGCCCCAAAGCCTTCAGGACCTAGGTTaGCAGAAATCGTTCTGCCTCCAGTCCAAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PANKPQSLQDLG*QKSFCLQSKGL
Trigger: TAGGCCTTTGGACTGGAGGCAGAACGATTTCTGCAAACCTAGGTCCTGAAGGCTTTGGGGCTTATTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAGCCGTCACGGCTGCTaGAGCTGTTGCGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASRHGC*SCCDPS
Trigger: GGAGGGGTCGCAACAGCTGCAGCAGCCGTGACGGCT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCGCAGCCGTCACGGCTaGTGCAGCTGTTGCGACCCC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENRSRHG*CSCCDP
Trigger: GGGGTCGCAACAGCTGCAGCAGCCGTGACGGCTGCG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACTTGTTTTCGGGACATaGTTCAGCCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKLVFGT*FSPQPS
Trigger: GGAGGGCTGGGGGCTGAAGCATGTCCCGAAAACAAG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAAAGGGCACAAGAGGTaGAGGTGGAGAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHKGHKR*RWRGDG
Trigger: GCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAATGCGCATGTCTAGGTaGGAGCATATATACCACCCT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGMRMSR*EHIYHP
Trigger: AGGGTGGTATATATGCTCGCACCTAGACATGCGCAT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGTCACTGCGTTGAGCTaGGCCTGGTTGACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQVTALS*AWLTAV
Trigger: CACAGCCGTCAACCAGGCCCAGCTCAACGCAGTGAC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGCCATTAACCATGGGTaGGGCAGGAGGCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKAINHG*GRRPVA
Trigger: AGCTACTGGCCTCCTGCCCCACCCATGGTTAATGGC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACACAAGAGGTGCAGGTaGAGAGGAGATGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKHKRCR*RGDGVE
Trigger: CTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACACAAGAGGTGCAGGTaGAGAGGAGATGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSHKRCR*RGDGVE
Trigger: CTCGACGCCATCTCCTCTCCACCTGCACCTCTTGTG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCTTGCGCTTGGCAGGTaGCCACTTCCCGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHLALGR*PLPENA
Trigger: TGCATTTTCGGGAAGTGGCCACCTGCCAAGCGCAAG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATCAGGCAGTTCGTCGTaGGAGGTCACGTTATTTACA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGSGSSS*EVTLFT
Trigger: TGTAAATAACGTGACCTCCCACGACGAACTGCCTGA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAGCAGTAGACAGAAGCTaGACTCACAGCAAGTTACGA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGAVDRS*THSKLR
Trigger: TCGTAACTTGCTGTGAGTCCAGCTTCTGTCTACTGC...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACTCATTATGCTGACGTaGGGTCCATCTTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLIMLT*GPSYGS
Trigger: ACTGCCATAAGATGGACCCCACGTCAGCATAATGAG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACCCCTCCCCGCTATGTaGAACTCCCAGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKPLPAM*NSQCGF
Trigger: GAAACCACACTGGGAGTTCCACATAGCGGGGAGGGG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACACCAGGCATTGAGCTaGGCCATTAACCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKHQALS*AINHGW
Trigger: CCACCCATGGTTAATGGCTCAGCTCAATGCCTGGTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAATCAACCTTCCCTCATaGCCACTGAGAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKINLPS*PLRGSP
Trigger: AGGGCTCCCTCTCAGTGGTCATGAGGGAAGGTTGAT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTGAGCTCGGGATGCTaGGGCGACACCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLSSGC*GDTTSW
Trigger: CCAGCTGGTGGTGTCGCCTCAGCATCCCGAGCTCAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCGTCCATGCTGCTGCTaGCGGGCAAAACGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENRPCCC*RAKREA
Trigger: CGCCTCCCGTTTTGCCCGGCAGCAGCAGCATGGACG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000423015.5
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCACACGTCCATGCTGCTaGTGCCGGGCAAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSTRPCC*CRAKRE
Trigger: CTCCCGTTTTGCCCGGCAGCAGCAGCATGGACGTGT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAGCCGTCACGGCTGCTaGAGCTGTTGCGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENSRHGC*SCCDPS
Trigger: GGAGGGGTCGCAACAGCTGCAGCAGCCGTGACGGCT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAAAGGGCACAAGAGGTaGAGGTGGAGAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSKGHKR*RWRGDG
Trigger: GCCATCTCCTCTCCACCTGCACCTCTTGTGCCCTTT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATCCTCCTTCACAGACTaGTTCAAAGATCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGSSFTD*FKDPFP
Trigger: TGGGAAAGGATCTTTGAAGCAGTCTGTGAAGGAGGA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCGGCTGCTTCGAGAGCTaGACATCCAGGTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSGCFES*TSRCRE
Trigger: CTCTCGGCACCTGGATGTCCAGCTCTCGAAGCAGCC...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCCCAACTCTTGCGCTTaGCAGGTGGCCACTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSPNSCA*QVATSR
Trigger: TCGGGAAGTGGCCACCTGCCAAGCGCAAGAGTTGGG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATCAGTGACCCTTATTTaGGCATTGAGCTGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGSVTLI*ALSCLN
Trigger: ATTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGGCGACACCACCAGCTaGGTTCTCTACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQGDTTS*VLYLPP
Trigger: AGGAGGAAGGTAGAGAACCCAGCTGGTGGTGTCGCC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACCACCCTCATTATGCTaGCGTGGGGTCCATCTTATG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSPPSLC*RGVHLM
Trigger: CATAAGATGGACCCCACGTCAGCATAATGAGGGTGG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAAAGGGCCTTTGTTCTaGCACATTCAAATGAGACCA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGKGPLF*HIQMRP
Trigger: TGGTCTCATTTGAATGTGGCAGAACAAAGGCCCTTT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAATCACTCCAGCTCGTaGATCAGGAAGGGGGATGCA +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSNHSSS*IRKGDA
Trigger: TGCATCCCCCTTCCTGATCCACGAGCTGGAGTGATT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGGCTGCTTCGAGAGCTaGACATCCAGGTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAGCFES*TSRCRE
Trigger: CTCTCGGCACCTGGATGTCCAGCTCTCGAAGCAGCC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGATGTCCCATCTGACTaGCTGCTTCGAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQDVPSD*LLRELD
Trigger: GTCCAGCTCTCGAAGCAGCCAGTCAGATGGGACATC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAAAGAAAAGTTTCAGTaGCTGGGAAGTTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGKEKFQ*LGSCVG
Trigger: TCCCACACAACTTCCCAGCCACTGAAACTTTTCTTT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACAGTCAACAGTTCTGTaGGGAAGTCTGACGCACGGA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQQSTVL*GSLTHG
Trigger: TCCGTGCGTCAGACTTCCTCACAGAACTGTTGACTG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCACCAGGCATTGAGCTaGGCCATTAACCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSHQALS*AINHGW
Trigger: CCACCCATGGTTAATGGCTCAGCTCAATGCCTGGTG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATATTACCACCAGGCATTaGGCTGAGCCATTAACCATG +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHITTRH*AEPLTM
Trigger: CATGGTTAATGGCTCAGCTCAATGCCTGGTGGTAAT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATTCTGCTAATCAGGCATaGGGTTGGCTGTCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHSANQA*GWLSFY
Trigger: GTAAAAGGACAGCCAACCTCATGCCTGATTAGCAGA...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCATCAACCTTCCCTCATaGCCACTGAGAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSINLPS*PLRGSP
Trigger: AGGGCTCCCTCTCAGTGGTCATGAGGGAAGGTTGAT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCACCCTCATTATGCTaGCGTGGGGTCCATCTTATG +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPPSLC*RGVHLM
Trigger: CATAAGATGGACCCCACGTCAGCATAATGAGGGTGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAATCCAGCGTGTACAGTaGAGACGACTGCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKIQRVQ*RRLPGK
Trigger: TTTTCCTGGCAGTCGTCTGCACTGTACACGCTGGAT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACACACGTCCATGCTGCTaGTGCCGGGCAAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENTRPCC*CRAKRE
Trigger: CTCCCGTTTTGCCCGGCAGCAGCAGCATGGACGTGT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000423015.5
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAATTCAAGGCATGTCTaGTGCCAGGTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQNSRHV*CQVSSR
Trigger: CCTGGAGGAGACCTGGCAGCAGACATGCCTTGAATT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGAGCAAGATGTCCACTaGCGAGCTCTTCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSEQDVH*RALLTD
Trigger: ATCTGTGAGAAGAGCTCGGCAGTGGACATCTTGCTC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCTTGTTTTCGGGACATaGTTCAGCCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFALVFGT*FSPQPS
Trigger: GGAGGGCTGGGGGCTGAAGCATGTCCCGAAAACAAG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATCATCCCAGAACAAACTaGCTCCTTCTCTCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHHPRTN*LLLSPN
Trigger: ATTTGGCGAGAGAAGGAGGCAGTTTGTTCTGGGATG...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGCCAAGACGGGAACATaGCGAACCAGTTACATCATC +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSAKTGT*RTSYII
Trigger: GATGATGTAACTGGTTCGGCATGTTCCCGTCTTGGC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGGGGGAGGGGAAGCGTaGAGGAAACAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENGGGEA*RKQSKS
Trigger: GGACTTGGACTGTTTCCTCCACGCTTCCCCTCCCCC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
ENST00000423015.5
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGGCTGCTTCGAGAGCTaGACATCCAGGTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENGCFES*TSRCRE
Trigger: CTCTCGGCACCTGGATGTCCAGCTCTCGAAGCAGCC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGCCATTAACCATGGGTaGGGCAGGAGGCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAAINHG*GRRPVA
Trigger: AGCTACTGGCCTCCTGCCCCACCCATGGTTAATGGC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCCCAACTCTTGCGCTTaGCAGGTGGCCACTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENPNSCA*QVATSR
Trigger: TCGGGAAGTGGCCACCTGCCAAGCGCAAGAGTTGGG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGATATTAGGCACTGGTaGCTACTCCTCCGAAACGTC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKDIRHW*LLLRNV
Trigger: GACGTTTCGGAGGAGTAGCCACCAGTGCCTAATATC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGCCAGCTGGATTTCCTaGCTTCCGGTTACCCATTTC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQASWIS*LPVTHF
Trigger: GAAATGGGTAACCGGAAGCCAGGAAATCCAGCTGGC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAGAGAGAGAAATTACTaGACATTTCAGACACTGATG +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGRERNY*TFQTLM
Trigger: CATCAGTGTCTGAAATGTTCAGTAATTTCTCTCTCT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGATACAAAGGACCTCACTaGTACAAAAGAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGYKGPH*YKRERN
Trigger: ATTTCTCTCTCTTTTGTATCAGTGAGGTCCTTTGTA...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTTCCCTCATGACCACTaGGAGGGAGCCCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSFPHDH*EGALFE
Trigger: TTCAAACAGGGCTCCCTCTCAGTGGTCATGAGGGAA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATACTGCTGTTTCCTGTaGATGACACCACTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKYCCFL*MTPLLS
Trigger: CGAGAGAAGTGGTGTCATTCACAGGAAACAGCAGTA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTCAAGGCATGTCTGCTaGCAGGTCTCCTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASRHVC*QVSSRD
Trigger: ATCCCTGGAGGAGACCTGGCAGCAGACATGCCTTGA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTTGTTTTCGGGACATaGTTCAGCCCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLVFGT*FSPQPS
Trigger: GGAGGGCTGGGGGCTGAAGCATGTCCCGAAAACAAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAGTTTCAATGCACCCTaGTCCAAGAAAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSSFNAP*SKKGQE
Trigger: CTCCTGACCTTTCTTGGAGCAGGGTGCATTGAAACT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATACCATTGAGTTTCAATaGACCCTGCTCCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHTIEFQ*TLLQER
Trigger: CCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAATGCGCATGTCTAGGTaGGAGCATATATACCACCCT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSMRMSR*EHIYHP
Trigger: AGGGTGGTATATATGCTCGCACCTAGACATGCGCAT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATTGCAGAAATCGTTCTaGCTCCAGTCCAAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKLQKSF*LQSKGL
Trigger: TAGGCCTTTGGACTGGAGGCAGAACGATTTCTGCAA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACATCCCAGAACAAACTaGCTCCTTCTCTCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSHPRTN*LLLSPN
Trigger: ATTTGGCGAGAGAAGGAGGCAGTTTGTTCTGGGATG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAAATCGTGGTGGCCATaGCTTAATGCCATCACTGGC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQKSWWP*LNAITG
Trigger: GCCAGTGATGGCATTAAGCCATGGCCACCACGATTT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACTCATTATGCTGACGTaGGGTCCATCTTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSLIMLT*GPSYGS
Trigger: ACTGCCATAAGATGGACCCCACGTCAGCATAATGAG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCCCCTCCCCGCTATGTaGAACTCCCAGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENPLPAM*NSQCGF
Trigger: GAAACCACACTGGGAGTTCCACATAGCGGGGAGGGG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACTGCCACTGCAGAGGTaGTGGACGTTTTATTACAAA +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSLPLQR*WTFYYK
Trigger: TTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAAGGAAATGGTCAGCATaGAGTTCATTTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKRKWSA*SSFWGL
Trigger: GAGACCCCAAAATGAACTTCATGCTGACCATTTCCT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCTGTTTTCCTTCCGTaGAGGTACGACAGGTACATA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPVFLP*RYDRYI
Trigger: TATGTACCTGTCGTACCTTCACGGAAGGAAAACAGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACCCTTATTTGGGCATTaGGCTGCCTCAATGAAACTA +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKPLFGH*AASMKL
Trigger: TAGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTCAAGGCATGTCTGCTaGCAGGTCTCCTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENSRHVC*QVSSRD
Trigger: ATCCCTGGAGGAGACCTGGCAGCAGACATGCCTTGA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000423015.5
ENST00000458272.1
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAACCATTGAGTTTCAATaGACCCTGCTCCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSTIEFQ*TLLQER
Trigger: CCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAACCATCTCTGCCACTaGAGAGGTGATGGACGTTTT +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQNHLCH*RGDGRF
Trigger: AAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCCCTGGATAAAAGCGTaGTTGTTAGGACACCACCAG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSPWIKA*LLGHHQ
Trigger: CTGGTGGTGTCCTAACAAGCACGCTTTTATCCAGGG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATTGCAGAAATCGTTCTaGCTCCAGTCCAAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQLQKSF*LQSKGL
Trigger: TAGGCCTTTGGACTGGAGGCAGAACGATTTCTGCAA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTCCAGCGAGGTGTCTaGAGAGCTTCGATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLQRGV*RASMVR
Trigger: TCTCACCATCGAAGCTCTGCAGACACCTCGCTGGAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR GCA 90 bp CATCAGCTCTTAGGGACTGATAAATCTGTCTTTTCCCCAGTCCCACCCAGTCATTCAATAATTTTCTGCTaGCAGGTCTCCTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: HQLLGTDKSVFSPVPPSHSIIFC*QVSSRD
Trigger: ATCCCTGGAGGAGACCTGGCAGCAGAAAATTATTGA...ATGACTGGGTGGGACTGGGGAAAAGACAGATTTATCAGTCCCTAAGAGCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGATGTCCCATCTGACTaGCTGCTTCGAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENDVPSD*LLRELD
Trigger: GTCCAGCTCTCGAAGCAGCCAGTCAGATGGGACATC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCAGGTGGAGAGGAGATaGCGTCGAGAGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAQVERR*RREKRI
Trigger: TATCCTCTTCTCTCGACGCCATCTCCTCTCCACCTG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTTGCGCTTGGCAGGTaGCCACTTCCCGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLALGR*PLPENA
Trigger: TGCATTTTCGGGAAGTGGCCACCTGCCAAGCGCAAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGCAGTAGACAGAAGCTaGACTCACAGCAAGTTACGA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQAVDRS*THSKLR
Trigger: TCGTAACTTGCTGTGAGTCCAGCTTCTGTCTACTGC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCGATATTAGGCACTGGTaGCTACTCCTCCGAAACGTC +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSDIRHW*LLLRNV
Trigger: GACGTTTCGGAGGAGTAGCCACCAGTGCCTAATATC...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAGTGGAACTCCCAGTGTaGTTTCGATATACTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSVELPV*FRYTGN
Trigger: ATTGCCAGTATATCGAAACCACACTGGGAGTTCCAC...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGGTGATGCTCTTTCCTaGAAGTCGTGTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAGDALS*KSCVAE
Trigger: CTCTGCCACACACGACTTCCAGGAAAGAGCATCACC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
3UTR CAA 72 bp TACATGAACAAATCTGAACCCTGGATAAAAGCGTGCTaGTTAGGACACCACCAGAAACACCAGGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: YMNKSEPWIKAC*LGHHQKHQAGF
Trigger: AAACCCGGCCTGGTGTTTCTGGTGGTGTCCTAACAAGCACGCTTTTATCCAGGGTTCAGATTTGTTCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAGGAAATGGTCAGCATaGAGTTCATTTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQRKWSA*SSFWGL
Trigger: GAGACCCCAAAATGAACTTCATGCTGACCATTTCCT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTTCCCTCATGACCACTaGGAGGGAGCCCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENFPHDH*EGALFE
Trigger: TTCAAACAGGGCTCCCTCTCAGTGGTCATGAGGGAA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCCTTATTTGGGCATTaGGCTGCCTCAATGAAACTA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPLFGH*AASMKL
Trigger: TAGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTACTGCTGTTTCCTGTaGATGACACCACTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSYCCFL*MTPLLS
Trigger: CGAGAGAAGTGGTGTCATTCACAGGAAACAGCAGTA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGCAGAGCTTCGATGGTaGGAGGAGGAACTCGATTTC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENAELRW*EEELDF
Trigger: GAAATCGAGTTCCTCCTCTCACCATCGAAGCTCTGC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGATCAGGAAGGGGGATaGAAACTCACTGACACGAAG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFADQEGG*KLTDTK
Trigger: CTTCGTGTCAGTGAGTTTGCATCCCCCTTCCTGATC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAATTCAAGGCATGTCTaGTGCCAGGTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENNSRHV*CQVSSR
Trigger: CCTGGAGGAGACCTGGCAGCAGACATGCCTTGAATT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000423015.5
ENST00000458272.1
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCTTAGTAACCATCTCTaGCACTGCAGAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSLSNHL*HCRGDG
Trigger: TCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAATATTTGAAGGGCTTTaGAAGGGAAAGCACACAGAG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSIFEGL*KGKHTE
Trigger: CTCTGTGTGCTTTCCCTTGCAAAGCCCTTCAAATAT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCGATAGAGACCACTACTaGATGTGTGAGTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSDRDHY*MCECGM
Trigger: CATGCCACACTCACACATCCAGTAGTGGTCTCTATC...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAATAACCAGTCCTCTTaGGAGCAAAATGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSNNQSS*EQNVFR
Trigger: CCTGAAGACATTTTGCTCCCAAGAGGACTGGTTATT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATCAGTGACCCTTATTTaGGCATTGAGCTGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQSVTLI*ALSCLN
Trigger: ATTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACATTCAAGGCATGTCATaGGGTCTCCAGCGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENIQGMS*GLQRGV
Trigger: GACACCTCGCTGGAGACCCCATGACATGCCTTGAAT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAGCAAGCACCACCATTaGGTTTCAATGCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENSKHHH*VSMHPA
Trigger: AGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTATTACCACCAGGCATTaGGCTGAGCCATTAACCATG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAITTRH*AEPLTM
Trigger: CATGGTTAATGGCTCAGCTCAATGCCTGGTGGTAAT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATTTGTTCTTGCAACTTaGGTTTCTTTTGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKFVLAT*VSFGFA
Trigger: GGCAAAGCCAAAAGAAACTCAAGTTGCAAGAACAAA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCATCAAAGAGACATTaGTGTATACTCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPSKRH*CILRIG
Trigger: GCCTATCCTGAGTATACATCAATGTCTCTTTGATGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTTCTCTCTCTGTTTTTaGCACCTGTTTCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAFSLCF*HLFPED
Trigger: GTCCTCGGGAAACAGGTGTCAAAAACAGAGAGAGAA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAGAGGGAGCCCTGTTTaGAAAGAATATCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQRGSPV*KEYLVW
Trigger: CCAAACAAGATATTCTTTTCAAACAGGGCTCCCTCT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTCTCTTCTCTGGGTCTaGAGCTGCTTGTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSSLLWV*SCLYFH
Trigger: ATGGAAATACAAGCAGCTTCAGACCCAGAGAAGAGA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGAGCAAGATGTCCACTaGCGAGCTCTTCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENEQDVH*RALLTD
Trigger: ATCTGTGAGAAGAGCTCGGCAGTGGACATCTTGCTC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
ENST00000423015.5
CDS-3UTR GCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAACCATCTCTGCCACTaGAGAGGTGATGGACGTTTT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFANHLCH*RGDGRF
Trigger: AAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTACGACAGGTACATATaGGCATGTCTAGGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENYDRYI*ACLGAS
Trigger: GCTCGCACCTAGACATGCGCATATGTACCTGTCGTA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAGAAAGCTTGACTACTaGTGTGTCCCATGTGACAAA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQRKLDY*CVPCDK
Trigger: TTTGTCACATGGGACACAGCAGTAGTCAAGCTTTCT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATACTGAATGTTCATTTTaGCAATGTTCTGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHTECSF*QCSGCK
Trigger: TTTGCACCCAGAACATTGCCAAAATGAACATTCAGT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATACAAAGGACCTCACTaGTACAAAAGAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKYKGPH*YKRERN
Trigger: ATTTCTCTCTCTTTTGTATCAGTGAGGTCCTTTGTA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAATCCATTTCCAAAATaGTCAGGACTGGTCATCATT +
Preference number: 4 (lower is better)
Translates to: KQASTTIEFQCTLLQERSNPFPK*SGLVII
Trigger: AATGATGACCAGTCCTGATCATTTTGGAAATGGATT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATTTGTTCTTGCAACTTaGGTTTCTTTTGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQFVLAT*VSFGFA
Trigger: GGCAAAGCCAAAAGAAACTCAAGTTGCAAGAACAAA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTGTTTGGGATATTTGTaGAGTGATGGCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSCLGYL*SDGPGF
Trigger: AAATCCTGGGCCATCACTTCACAAATATCCCAAACA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCCTGTTTTCCTTCCGTaGAGGTACGACAGGTACATA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENPVFLP*RYDRYI
Trigger: TATGTACCTGTCGTACCTTCACGGAAGGAAAACAGG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTCTCTTCTCTGGGTCTaGAGCTGCTTGTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASLLWV*SCLYFH
Trigger: ATGGAAATACAAGCAGCTTCAGACCCAGAGAAGAGA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAGTTTCAATGCACCCTaGTCCAAGAAAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENSFNAP*SKKGQE
Trigger: CTCCTGACCTTTCTTGGAGCAGGGTGCATTGAAACT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAGGCAATGTTCCGAATaGACTGGAAGAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENRQCSE*TGRAIQ
Trigger: TTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAATCTTTATCTTACTTTaGCTACCTTCTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQIFILL*LPSSCS
Trigger: GGAGCAGGAAGAAGGTAGGCAAAGTAAGATAAAGAT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGATAGAGACCACTACTaGATGTGTGAGTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENDRDHY*MCECGM
Trigger: CATGCCACACTCACACATCCAGTAGTGGTCTCTATC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACATGTTCCGAATGCACTaGAAGAGCCATCCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENMFRMH*KSHPKA
Trigger: GGCTTTTGGATGGCTCTTCCAGTGCATTCGGAACAT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAACTGAATGTTCATTTTaGCAATGTTCTGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKTECSF*QCSGCK
Trigger: TTTGCACCCAGAACATTGCCAAAATGAACATTCAGT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTCAGGCAGTTCGTCGTaGGAGGTCACGTTATTTACA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENSGSSS*EVTLFT
Trigger: TGTAAATAACGTGACCTCCCACGACGAACTGCCTGA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGTGGAACTCCCAGTGTaGTTTCGATATACTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAVELPV*FRYTGN
Trigger: ATTGCCAGTATATCGAAACCACACTGGGAGTTCCAC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCAAAGAAAAGTTTCAGTaGCTGGGAAGTTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSKEKFQ*LGSCVG
Trigger: TCCCACACAACTTCCCAGCCACTGAAACTTTTCTTT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTGCCACTGCAGAGGTaGTGGACGTTTTATTACAAA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLPLQR*WTFYYK
Trigger: TTTGTAATAAAACGTCCATCACCTCTGCAGTGGCAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCTACATGAACAAATCTaGACCCTGGATAAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFALHEQI*TLDKSV
Trigger: CACGCTTTTATCCAGGGTTCAGATTTGTTCATGTAG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAACTCTTTTTCTACATaGACAAATCTGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQNSFST*TNLNPG
Trigger: TCCAGGGTTCAGATTTGTTCATGTAGAAAAAGAGTT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTGGCAATGTTCTGGGTaGAAAATTGTAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSWQCSG*KIVARN
Trigger: ATTTCTGGCTACAATTTTGCACCCAGAACATTGCCA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCTAATACAACCTTTTaGTTTCCCTTTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPNTTF*FPFLQE
Trigger: TTCTTGGAGAAAGGGAAAGCAAAAGGTTGTATTAGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAATTTGGGCATTGAGCTaGCTCAATGAAACTATAAAA +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKIWALS*LNETIK
Trigger: TTTTATAGTTTCATTGAGGCAGCTCAATGCCCAAAT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATGTAAGTCCAAAGAATaGAAAGAAAGCTTGACTACT +
Preference number: 4 (lower is better)
Translates to: AGIKARGNVPNALEEPSKCKSKE*KESLTT
Trigger: AGTAGTCAAGCTTTCTTTGCATTCTTTGGACTTACA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CAAGGCATGTCTGTGTCATCTACTGTCCTTCCTTTTGTTCAAGACAACAAAAACTCTTCAATAATTTTCTaGTGCCAGGTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGMSVSSTVLPFVQDNKNSSIIF*CQVSSR
Trigger: CCTGGAGGAGACCTGGCAGCAGAAAATTATTGAAGA...GTTTTTGTTGTCTTGAACAAAAGGAAGGACAGTAGATGACACAGACATGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCAAAATGATCAGGACTaGTCATCATTCACAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAQNDQD*SSFTGV
Trigger: GACACCTGTGAATGATGACCAGTCCTGATCATTTTG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCATTTTGGCAATGTTCTaGGTGCAAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSILAMF*VQNCSQ
Trigger: CTGGCTACAATTTTGCACCCAGAACATTGCCAAAAT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAAAGATATTAGGCACTaGTGGCTACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENKDIRH*WLLLRN
Trigger: GTTTCGGAGGAGTAGCCACCAGTGCCTAATATCTTT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCAGAGAGAGAAATTACTaGACATTTCAGACACTGATG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSRERNY*TFQTLM
Trigger: CATCAGTGTCTGAAATGTTCAGTAATTTCTCTCTCT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCCATCAAAGAGACATTaGTGTATACTCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENPSKRH*CILRIG
Trigger: GCCTATCCTGAGTATACATCAATGTCTCTTTGATGG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTGTTTGGGATATTTGTaGAGTGATGGCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENCLGYL*SDGPGF
Trigger: AAATCCTGGGCCATCACTTCACAAATATCCCAAACA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCCTAATACAACCTTTTaGTTTCCCTTTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSPNTTF*FPFLQE
Trigger: TTCTTGGAGAAAGGGAAAGCAAAAGGTTGTATTAGG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAATTTGGGCATTGAGCTaGCTCAATGAAACTATAAAA +
Preference number: 4 (lower is better)
Translates to: RLLVTISATAEVMDVLLQIWALS*LNETIK
Trigger: TTTTATAGTTTCATTGAGGCAGCTCAATGCCCAAAT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp CAAGGCATGTCTGTGTCATCTACTGTCCTTCCTTTTGTTCAAGACAACAAAAACGTTCCACCTAAAGGATaGAGTTTCCATCAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QGMSVSSTVLPFVQDNKNVPPKG*SFHQLL
Trigger: TAAGAGCTGATGGAAACTGCATCCTTTAGGTGGAAC...GTTTTTGTTGTCTTGAACAAAAGGAAGGACAGTAGATGACACAGACATGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCAAAATGATCAGGACTaGTCATCATTCACAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENQNDQD*SSFTGV
Trigger: GACACCTGTGAATGATGACCAGTCCTGATCATTTTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAATAACCAGTCCTCTTaGGAGCAAAATGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENNNQSS*EQNVFR
Trigger: CCTGAAGACATTTTGCTCCCAAGAGGACTGGTTATT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCAACAAATCTGAACCCTaGATAAAAGCGTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSNKSEP*IKACLL
Trigger: TAACAAGCACGCTTTTATCCAGGGTTCAGATTTGTT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTATTTTGGCAATGTTCTaGGTGCAAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAILAMF*VQNCSQ
Trigger: CTGGCTACAATTTTGCACCCAGAACATTGCCAAAAT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTCGTTTTCTGGAGTTaGGATGTAGACATAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENLVFWS*DVDIER
Trigger: TCTCTCTATGTCTACATCCCAACTCCAGAAAACGAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR TCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAACTCTTTTTCTACATaGACAAATCTGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFANSFST*TNLNPG
Trigger: TCCAGGGTTCAGATTTGTTCATGTAGAAAAAGAGTT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR TCA 90 bp TTCCAATTCAAGGCATGTCTGTGTCATCTACTGTCCTTCCTTTTGTTCAAGACATTTTGTTTCAGTCAATaGCACGAAGCTGCCATCTAT +
Preference number: 4 (lower is better)
Translates to: FQFKACLCHLLSFLLFKTFCFSQ*HEAAIY
Trigger: ATAGATGGCAGCTTCGTGTCATTGACTGAAACAAAA...TGTCTTGAACAAAAGGAAGGACAGTAGATGACACAGACATGCCTTGAATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR GCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTGGCAATGTTCTGGGTaGAAAATTGTAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENWQCSG*KIVARN
Trigger: ATTTCTGGCTACAATTTTGCACCCAGAACATTGCCA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTTAGACATTTATTTTTaGCTCTGTGTTAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSLDIYF*LCVSKE
Trigger: CTCCTTGCTAACACAGAGGCAAAAATAAATGTCTAA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR GCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTGTAAGTCCAAAGAATaGAAAGAAAGCTTGACTACT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSCKSKE*KESLTT
Trigger: AGTAGTCAAGCTTTCTTTGCATTCTTTGGACTTACA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCAATGCAGCTTTGTCATaGAATCTGAACATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSNAALS*NLNISF
Trigger: AAAAGAGATGTTCAGATTCCATGACAAAGCTGCATT...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTTAGCAAGGAGATCTTaGCCATTAACAGGTGTATTT +
Preference number: 4 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFALARRS*PLTGVF
Trigger: AAATACACCTGTTAATGGCCAAGATCTCCTTGCTAA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCGATTTCTCGTTTTCTaGAGTTGGGATGTAGACATA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENRFLVF*SWDVDI
Trigger: TATGTCTACATCCCAACTCCAGAAAACGAGAAATCG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAACAAATCTGAACCCTaGATAAAAGCGTGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENNKSEP*IKACLL
Trigger: TAACAAGCACGCTTTTATCCAGGGTTCAGATTTGTT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CCA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACAATGCAGCTTTGTCATaGAATCTGAACATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VCICVCVCVCVQRFISENNAALS*NLNISF
Trigger: AAAAGAGATGTTCAGATTCCATGACAAAGCTGCATT...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAGTGGGAGAAGGAGCTaGACGCGGGGGCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGSGRRS*TRGRVG
Trigger: CCCCACCCGCCCCCGCGTCAAGCTCCTTCTCCCACT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS CCA 90 bp GAGAGGGAGAGAGGAGGTGAGAGAGGAGCGAGTGAGTGGGGTGGATaGAGAGAGGCATCCAGCGTGTACAGTGCAGACGACTGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: ERERGGERGASEWGG*REASSVYSADDCQE
Trigger: TTCCTGGCAGTCGTCTGCACTGTACACGCTGGATGCCTCTCTCCATCCACCCCACTCACTCGCTCCTCTCTCACCTCCTCTCTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS CCA 90 bp TCAATGCAGGAGAGGGAGAGAGGAGGTGAGAGAGGAGCGAGTGAGTaGGGTGGATGGAGAGAGGCATCCAGCGTGTACAGTGCAGACGAC +
Preference number: 5 (lower is better)
Translates to: SMQERERGGERGASE*GGWREASSVYSADD
Trigger: GTCGTCTGCACTGTACACGCTGGATGCCTCTCTCCATCCACCCCACTCACTCGCTCCTCTCTCACCTCCTCTCTCCCTCTCCTGCATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGAAATGAGGTCACTGCGTaGAGCTGGGCCTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGNEVTA*SWAWLT
Trigger: CGTCAACCAGGCCCAGCTCAACGCAGTGACCTCATT...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAAGTGGGAGAAGGAGCTaGACGCGGGGGCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQSGRRS*TRGRVG
Trigger: CCCCACCCGCCCCCGCGTCAAGCTCCTTCTCCCACT...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACCCCAACTCTTGCGCTaGGCAGGTGGCCACTTCCCG +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSPQLLR*AGGHFP
Trigger: CGGGAAGTGGCCACCTGCCAAGCGCAAGAGTTGGGG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACCCCAACTCTTGCGCTaGGCAGGTGGCCACTTCCCG +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKPQLLR*AGGHFP
Trigger: CGGGAAGTGGCCACCTGCCAAGCGCAAGAGTTGGGG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS GCA 90 bp TTTTGTTTCAGTCAACTGGTCGGGAGTCCGGCGGCTAGAGTTGATTaGAAGGGGCCTGTTGCTCGACTGTGCGTTAAAGAGGCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: FCFSQLVGSPAARVD*KGPVARLCVKEARG
Trigger: CCCTCTAGCCTCTTTAACGCACAGTCGAGCAACAGGCCCCTTGCAATCAACTCTAGCCGCCGGACTCCCGACCAGTTGACTGAAACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACACAGTTGGGGCTGTTaGTTTGTCAGTCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGHSWGC*FVSLSG
Trigger: GCCAGACAGACTGACAAACAAACAGCCCCAACTGTG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS CCA 90 bp ACGGGAGTAACAATTCCCTTCCAGGGCTCTAATCACTCCAGCTCGTaGATCAGGAAGGGGGATGCAAACTCACTGACACGAAGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: TGVTIPFQGSNHSSS*IRKGDANSLTRSCH
Trigger: ATGGCAGCTTCGTGTCAGTGAGTTTGCATCCCCCTTCCTGATCCACGAGCTGGAGTGATTAGAGCCCTGGAAGGGAATTGTTACTCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACCAGACACCCTGAATTaGAGTCCTCCCCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKPDTLN*SPPLLP
Trigger: GGGCAGGAGGGGAGGACTCAAATTCAGGGTGTCTGG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CTGCTGTTTCCTGTGAATGACACCACTTCTCTCGGGGAATCGCTGAGCTCGGGACTCAGTGACCCTTATTaGGGCATTGAGCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: LLFPVNDTTSLGESLSSGLSDPY*GIELPQ
Trigger: TTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGAG...TCCCGAGCTCAGCGATTCCCCGAGAGAAGTGGTGTCATTCACAGGAAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS GCA 90 bp AGCGTTCCAATTCAAGGCATGTCATGGGGTCTCCAGCGAGGTGTCTaGAGAGCTTCGATGGTGAGAGGAGGAACTCGATTTCTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: SVPIQGMSWGLQRGV*RASMVRGGTRFLVF
Trigger: GAAAACGAGAAATCGAGTTCCTCCTCTCACCATCGAAGCTCTGCAGACACCTCGCTGGAGACCCCATGACATGCCTTGAATTGGAACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCAAATGAGGTCACTGCGTaGAGCTGGGCCTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSNEVTA*SWAWLT
Trigger: CGTCAACCAGGCCCAGCTCAACGCAGTGACCTCATT...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCATCAGTGGCTGGGAAGTaGTGTGGGAGTAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSSVAGK*CGSRKW
Trigger: CCACTTCCTACTCCCACACAACTTCCCAGCCACTGA...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACACCTGTCGCAGTGGTaGCATTTGAAGGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKHLSQW*HLKGFA
Trigger: TGCAAAGCCCTTCAAATGCAACCACTGCGACAGGTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGCAAATGGACAGATTTaGTGTGTGTGTGCGCGTGTG +
Preference number: 5 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHANGQI*CVCARV
Trigger: CACACGCGCACACACACACAAAATCTGTCCATTTGC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATAAGCAAGCACCACCATaGAGTTTCAATGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHKQAPP*SFNAPC
Trigger: GCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTT...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCCAGACACCCTGAATTaGAGTCCTCCCCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAPDTLN*SPPLLP
Trigger: GGGCAGGAGGGGAGGACTCAAATTCAGGGTGTCTGG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACCAATTCAAGGCATGTaGGCCAAGACGGGAACATGC +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSPIQGM*AKTGTC
Trigger: GCATGTTCCCGTCTTGGCCAACATGCCTTGAATTGG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412414.6
CDS-3UTR CAA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGAGAGAAGAGGATATTaGAAGGGCTTTGCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHERRGY*KGFARE
Trigger: TTCCCTTGCAAAGCCCTTCAAATATCCTCTTCTCTC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTCAGTGGCTGGGAAGTaGTGTGGGAGTAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASVAGK*CGSRKW
Trigger: CCACTTCCTACTCCCACACAACTTCCCAGCCACTGA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CCACCTAAAGGATGCAGTTTCCATCAGCTCTTAGGGACTGATAAATCTGTCTTTCACAGTTGGGGCTGTTaGTTTGTCAGTCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PPKGCSFHQLLGTDKSVFHSWGC*FVSLSG
Trigger: GCCAGACAGACTGACAAACAAACAGCCCCAACTGTG...AAAGACAGATTTATCAGTCCCTAAGAGCTGATGGAAACTGCATCCTTTAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451244.1
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTCACCTGTCGCAGTGGTaGCATTTGAAGGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAHLSQW*HLKGFA
Trigger: TGCAAAGCCCTTCAAATGCAACCACTGCGACAGGTG...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATCTTCAGGTTACTTCTaGGAAAACCTGCTCGCTCTA +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKSSGYF*ENLLAL
Trigger: TAGAGCGAGCAGGTTTTCCAAGAAGTAACCTGAAGA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTTCCTTCCGTGAAGGTACGACAGGTACATATGCGCATGTCTAGGTGCGAGCATGAGAGGGAGCCCTGTTaGAAAAGAATATCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: FPSVKVRQVHMRMSRCEHEREPC*KRISCL
Trigger: CAAACAAGATATTCTTTTCAAACAGGGCTCCCTCTC...ATGCTCGCACCTAGACATGCGCATATGTACCTGTCGTACCTTCACGGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAACCCTTATTTGGGCATaGAGCTGCCTCAATGAAACT +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKTLIWA*SCLNET
Trigger: AGTTTCATTGAGGCAGCTCAATGCCCAAATAAGGGT...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACATAATCTCCAACAATaGGCTCCCTTTTTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSHNLQQ*APFFPL
Trigger: CAAGGGGAAAAAGGGAGCCAATTGTTGGAGATTATG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS CCA 90 bp TGCAGAGCTTCGATGGTGAGAGGAGGAACTCGATTTCTCGTTTTCTaGAGTTGGGATGTAGACATAGAGAGATCTGTTACATCTGAGATG +
Preference number: 5 (lower is better)
Translates to: CRASMVRGGTRFLVF*SWDVDIERSVTSEM
Trigger: CATCTCAGATGTAACAGATCTCTCTATGTCTACATCCCAACTCCAGAAAACGAGAAATCGAGTTCCTCCTCTCACCATCGAAGCTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCACAGTTGGGGCTGTTaGTTTGTCAGTCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENHSWGC*FVSLSG
Trigger: GCCAGACAGACTGACAAACAAACAGCCCCAACTGTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000423015.5
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCACCTGTCGCAGTGGTaGCATTTGAAGGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENHLSQW*HLKGFA
Trigger: TGCAAAGCCCTTCAAATGCAACCACTGCGACAGGTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
ENST00000423015.5
ENST00000458272.1
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCATTTTTCCTTTCAAATTaGGGATCCCCTGGAGGGTTA +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSFFLSN*GSPGGL
Trigger: TAACCCTCCAGGGGATCCCAAATTTGAAAGGAAAAA...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATGGATAAAAGCGTGCTaGTTAGGACACCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQWIKAC*LGHHQK
Trigger: TTTCTGGTGGTGTCCTAACAAGCACGCTTTTATCCA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAAGAGAGGGAGCCCTGTTaGAAAAGAATATCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKEREPC*KRISCL
Trigger: CAAACAAGATATTCTTTTCAAACAGGGCTCCCTCTC...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATCTCTCCAAACACACTaGTTAGACACATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKSLQTH*LDTSGK
Trigger: TTTGCCAGATGTGTCTAACAAGTGTGTTTGGAGAGA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATTTCCATCTAGTTTTTaGTACTCTCCACAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKFPSSF*YSPQPA
Trigger: AGCTGGCTGTGGAGAGTACAAAAAACTAGATGGAAA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS CCA 90 bp GCTTCGATGGTGAGAGGAGGAACTCGATTTCTCGTTTTCTGGAGTTaGGATGTAGACATAGAGAGATCTGTTACATCTGAGATGAAAACC +
Preference number: 5 (lower is better)
Translates to: ASMVRGGTRFLVFWS*DVDIERSVTSEMKT
Trigger: GGTTTTCATCTCAGATGTAACAGATCTCTCTATGTCTACATCCCAACTCCAGAAAACGAGAAATCGAGTTCCTCCTCTCACCATCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTAGGACCAAAGGGCCTTaGTTCTGCCACATTCAAATG +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFARTKGP*FCHIQM
Trigger: CATTTGAATGTGGCAGAACAAAGGCCCTTTGGTCCT...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAAGTTAGCAAGGAGATCTaGGCCATTAACAGGTGTATT +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQVSKEI*AINRCI
Trigger: AATACACCTGTTAATGGCCAAGATCTCCTTGCTAAC...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATCTCTCCAAACACACTaGTTAGACACATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQSLQTH*LDTSGK
Trigger: TTTGCCAGATGTGTCTAACAAGTGTGTTTGGAGAGA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCTCAGTGACCCTTATTaGGGCATTGAGCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENLSDPY*GIELPQ
Trigger: TTGAGGCAGCTCAATGCCCAAATAAGGGTCACTGAG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCATAATCTCCAACAATaGGCTCCCTTTTTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSHNLQQ*APFFPL
Trigger: CAAGGGGAAAAAGGGAGCCAATTGTTGGAGATTATG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCGAATGCAAAGAAAGCTaGACTACTGCTGTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSECKES*TTAVSH
Trigger: ATGGGACACAGCAGTAGTCAAGCTTTCTTTGCATTC...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp AAGCAAGCAAGCACCACCATTGAGTTTCAATGCACCCTGCTCCAAGAAAGGTCACAATGGCGTTTTAAATaGTGTATTGTAACACGTAGG +
Preference number: 5 (lower is better)
Translates to: KQASTTIEFQCTLLQERSQWRFK*CIVTRR
Trigger: CCTACGTGTTACAATACACAATTTAAAACGCCATTG...TGACCTTTCTTGGAGCAGGGTGCATTGAAACTCAATGGTGGTGCTTGCTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAACAATGGCGTTTTAAATaGTGTATTGTAACACGTAGG +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKQWRFK*CIVTRR
Trigger: CCTACGTGTTACAATACACAATTTAAAACGCCATTG...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTCTTCAGGTTACTTCTaGGAAAACCTGCTCGCTCTA +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFASSGYF*ENLLAL
Trigger: TAGAGCGAGCAGGTTTTCCAAGAAGTAACCTGAAGA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGAGAGAAGAGGATATTaGAAGGGCTTTGCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAERRGY*KGFARE
Trigger: TTCCCTTGCAAAGCCCTTCAAATATCCTCTTCTCTC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAACCATTTCTTTCCCCTTaGATGCAAATAGACATGGAT +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQPFLSP*MQIDMD
Trigger: ATCCATGTCTATTTGCATCAAAGGGGAAAGAAATGG...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GCAGGAATAAAGGCAAGAGGCAATGTTCCGAATGCACTGGAAGAGCCATCCAAATTTTGTTCTTGCAACTaGAGTTTCTTTTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: AGIKARGNVPNALEEPSKFCSCN*SFFWLC
Trigger: GCAAAGCCAAAAGAAACTCAAGTTGCAAGAACAAAA...TTTGGATGGCTCTTCCAGTGCATTCGGAACATTGCCTCTTGCCTTTATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTGGATAAAAGCGTGCTaGTTAGGACACCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENWIKAC*LGHHQK
Trigger: TTTCTGGTGGTGTCCTAACAAGCACGCTTTTATCCA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATACAAAAATGCAGCTTaGTCATGGAATCTGAACATC +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQYKNAA*SWNLNI
Trigger: GATGTTCAGATTCCATGACAAAGCTGCATTTTTGTA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCCCATTTCTTTCCCCTTaGATGCAAATAGACATGGAT +
Preference number: 5 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSPFLSP*MQIDMD
Trigger: ATCCATGTCTATTTGCATCAAAGGGGAAAGAAATGG...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATTTCACACATTTCTGTaGTTCCATCTCAAGTATTCC +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQFHTFL*FHLKYS
Trigger: GGAATACTTGAGATGGAACAACAGAAATGTGTGAAA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTGTTAGCAAGGAGATCTaGGCCATTAACAGGTGTATT +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAVSKEI*AINRCI
Trigger: AATACACCTGTTAATGGCCAAGATCTCCTTGCTAAC...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGGCTCTTAGTAACCATCTCTGCCACTGCAGAGGTGATGGACGTTTTATTACAATATGTAAGTACCCACTaGCGTCTTTCGAAGATTTTT +
Preference number: 5 (lower is better)
Translates to: RLLVTISATAEVMDVLLQYVSTH*RLSKIF
Trigger: AAAAATCTTCGAAAGACGCAAGTGGGTACTTACATA...TTGTAATAAAACGTCCATCACCTCTGCAGTGGCAGAGATGGTTACTAAGAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACGAATGCAAAGAAAGCTaGACTACTGCTGTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENECKES*TTAVSH
Trigger: ATGGGACACAGCAGTAGTCAAGCTTTCTTTGCATTC...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTCTCGTTTTCTGGAGTaGGGATGTAGACATAGAGAG +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENSRFLE*GCRHRE
Trigger: CTCTCTATGTCTACATCCCAACTCCAGAAAACGAGA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTTTTTCCTTTCAAATTaGGGATCCCCTGGAGGGTTA +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENFFLSN*GSPGGL
Trigger: TAACCCTCCAGGGGATCCCAAATTTGAAAGGAAAAA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp TTCACAGGTGTCAACTCGGCTAAAGAAGAACAGTTTCAAAGCCATCCACTTAGCTTTCACACATTTCTGTaGTTCCATCTCAAGTATTCC +
Preference number: 5 (lower is better)
Translates to: FTGVNSAKEEQFQSHPLSFHTFL*FHLKYS
Trigger: GGAATACTTGAGATGGAACAACAGAAATGTGTGAAA...GCTAAGTGGATGGCTTTGAAACTGTTCTTCTTTAGCCGAGTTGACACCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTTTCCATCTAGTTTTTaGTACTCTCCACAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENFPSSF*YSPQPA
Trigger: AGCTGGCTGTGGAGAGTACAAAAAACTAGATGGAAA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp CGCACACACACACACAACTTCCCAAACGAAGATAACCTAATACAACCTTTTGCTTTTTGTTCTTGCAACTaGAGTTTCTTTTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RTHTHNFPNEDNLIQPFAFCSCN*SFFWLC
Trigger: GCAAAGCCAAAAGAAACTCAAGTTGCAAGAACAAAA...AGCAAAAGGTTGTATTAGGTTATCTTCGTTTGGGAAGTTGTGTGTGTGTGTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCACTGGGTTTTGTTCTaGCAACTTGAGTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENHWVLF*QLEFLL
Trigger: CAAAAGAAACTCAAGTTGCAAGAACAAAACCCAGTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACCAATGGCGTTTTAAATaGTGTATTGTAACACGTAGG +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENQWRFK*CIVTRR
Trigger: CCTACGTGTTACAATACACAATTTAAAACGCCATTG...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309446.11
ENST00000412414.6
ENST00000421199.5
CDS-3UTR CAA 90 bp GTGTGTATATGTGTGTGTGTGTGTGTGTGTGTACAGAGGTTTATAAGTGAGAACTATGTAAGTACCCACTaGCGTCTTTCGAAGATTTTT +
Preference number: 5 (lower is better)
Translates to: VCICVCVCVCVQRFISENYVSTH*RLSKIF
Trigger: AAAAATCTTCGAAAGACGCAAGTGGGTACTTACATA...GTTCTCACTTATAAACCTCTGTACACACACACACACACACACACATATACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309446.11
ENST00000412414.6
CDS CAA 72 bp CTAGGTAGACGTGGGGCGCAAGCTGGAGCCGGCAGCTaGCGAGGGGGCCTTTACGTGATGAGGCTCACCATG +
Preference number: 6 (lower is better)
Translates to: LGRRGAQAGAGS*RGGLYVMRLTM
Trigger: CATGGTGAGCCTCATCACGTAAAGGCCCCCTCGCAAGCTGCCGGCTCCAGCTTGCGCCCCACGTCTACCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS CCA 72 bp AGAGGAGGTGAGAGAGGAGCGAGTGAGTGGGGTGGATaGAGAGAGGCATCCAGCGTGTACAGTGCAGACGAC +
Preference number: 6 (lower is better)
Translates to: RGGERGASEWGG*REASSVYSADD
Trigger: GTCGTCTGCACTGTACACGCTGGATGCCTCTCTCCATCCACCCCACTCACTCGCTCCTCTCTCACCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS CAA 72 bp GGAGTCCGGCGGCTAGAGTTGATTGCAAGGGGCCTGTaGCTCGACTGTGCGTTAAAGAGGCTAGAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: GVRRLELIARGL*LDCALKRLEGA
Trigger: GGCTCCCTCTAGCCTCTTTAACGCACAGTCGAGCAACAGGCCCCTTGCAATCAACTCTAGCCGCCGGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS GCA 72 bp AGTCAACTGGTCGGGAGTCCGGCGGCTAGAGTTGATTaGAAGGGGCCTGTTGCTCGACTGTGCGTTAAAGAG +
Preference number: 6 (lower is better)
Translates to: SQLVGSPAARVD*KGPVARLCVKE
Trigger: CTCTTTAACGCACAGTCGAGCAACAGGCCCCTTGCAATCAACTCTAGCCGCCGGACTCCCGACCAGTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS CAA 72 bp GTTTCAGTCAACTGGTCGGGAGTCCGGCGGCTAGAGTaGATTGCAAGGGGCCTGTTGCTCGACTGTGCGTTA +
Preference number: 6 (lower is better)
Translates to: VSVNWSGVRRLE*IARGLLLDCAL
Trigger: TAACGCACAGTCGAGCAACAGGCCCCTTGCAATCAACTCTAGCCGCCGGACTCCCGACCAGTTGACTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457962.5
CDS GCA 72 bp ATTCAAGGCATGTCATGGGGTCTCCAGCGAGGTGTCTaGAGAGCTTCGATGGTGAGAGGAGGAACTCGATTT +
Preference number: 6 (lower is better)
Translates to: IQGMSWGLQRGV*RASMVRGGTRF
Trigger: AAATCGAGTTCCTCCTCTCACCATCGAAGCTCTGCAGACACCTCGCTGGAGACCCCATGACATGCCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421199.5
CDS GCA 72 bp GTTCCAATTCAAGGCATGTTGGCCAAGACGGGAACATaGCGAACCAGTTACATCATCTCCCCTTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: VPIQGMLAKTGT*RTSYIISPSSP
Trigger: GGGAGAGGAAGGGGAGATGATGTAACTGGTTCGGCATGTTCCCGTCTTGGCCAACATGCCTTGAATTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412414.6
ENST00000435602.1
CDS CCA 72 bp ACAATTCCCTTCCAGGGCTCTAATCACTCCAGCTCGTaGATCAGGAAGGGGGATGCAAACTCACTGACACGA +
Preference number: 6 (lower is better)
Translates to: TIPFQGSNHSSS*IRKGDANSLTR
Trigger: TCGTGTCAGTGAGTTTGCATCCCCCTTCCTGATCCACGAGCTGGAGTGATTAGAGCCCTGGAAGGGAATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309446.11
CDS CCA 72 bp GTGAGAGGAGGAACTCGATTTCTCGTTTTCTGGAGTTaGGATGTAGACATAGAGAGATCTGTTACATCTGAG +
Preference number: 6 (lower is better)
Translates to: VRGGTRFLVFWS*DVDIERSVTSE
Trigger: CTCAGATGTAACAGATCTCTCTATGTCTACATCCCAACTCCAGAAAACGAGAAATCGAGTTCCTCCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457962.5