RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000109787

Ensembl transcript IDs: ENST00000261438.10, ENST00000514033.1

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGTGGTACTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTaGTCATCCACACCACATCACACGTGTGAAATCTTGTGCTTCTGC +
Preference number: 1 (lower is better)
Translates to: PVVLDQWRPQITSRS*SSTPHHTCEILCFC
Trigger: GCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 90 bp CACATCACCCACCTAGATCGAAAGTTTGGGCTCATCTCCCATTGGTaGCAAAGACCTCCATATGAGCTGCAGGCACAAAGGAGGGCAAAG +
Preference number: 1 (lower is better)
Translates to: HITHLDRKFGLISHW*QRPPYELQAQRRAK
Trigger: CTTTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGATCTAGGTGGGTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 90 bp CTACACATCACCCACCTAGATCGAAAGTTTGGGCTCATCTCCCATTaGTGGCAAAGACCTCCATATGAGCTGCAGGCACAAAGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: LHITHLDRKFGLISH*WQRPPYELQAQRRA
Trigger: TGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGATCTAGGTGGGTGATGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 90 bp AGCATATTGTTTTTGGAGAGATTCTCCCATCTTGACCAGTGGTACTaGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGTCATCCA +
Preference number: 1 (lower is better)
Translates to: SILFLERFSHLDQWY*TSGGHRSQAVPGHP
Trigger: TGGATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 90 bp TGTAACAGCATATTGTTTTTGGAGAGATTCTCCCATCTTGACCAGTaGTACTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: CNSILFLERFSHLDQ*YWTSGGHRSQAVPG
Trigger: ACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 90 bp GGAAGGGACCCTGTGGAGGTAATCGTTGCCTTCGTACTAGGAAGCTaGCTGCTGAATCCAATGCTGAAGCACCATAACACAAGACAATCA +
Preference number: 1 (lower is better)
Translates to: GRDPVEVIVAFVLGS*LLNPMLKHHNTRQS
Trigger: TGATTGTCTTGTGTTATGGTGCTTCAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAAGGCAACGATTACCTCCACAGGGTCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR TCA 90 bp TCGAAAGTTTGGGCTCATCTCCCATTGGTGGCAAAGACCTCCATATaGGCTGCAGGCACAAAGGAGGGCAAAGAACTCGATTCAGATGAA +
Preference number: 1 (lower is better)
Translates to: SKVWAHLPLVAKTSI*AAGTKEGKELDSDE
Trigger: TTCATCTGAATCGAGTTCTTTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 90 bp ACAGATCACAAGCCGTTCCTGGTCATCCACACCACATCACACGTGTaGAATCTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTA +
Preference number: 1 (lower is better)
Translates to: TDHKPFLVIHTTSHV*NLVLLLQVPRCTLL
Trigger: TAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGAACGGCTTGTGATCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR TCA 90 bp AGGCTATTCACTGAACTCAGGCTCAAAGCTGATCCCAGATCAATCTaGTCCTTTCTCGCCCTTTCCCCCACTTCTCTATGGATTGGAACA +
Preference number: 1 (lower is better)
Translates to: RLFTELRLKADPRSI*SFLALSPTSLWIGT
Trigger: TGTTCCAATCCATAGAGAAGTGGGGGAAAGGGCGAGAAAGGATCAGATTGATCTGGGATCAGCTTTGAGCCTGAGTTCAGTGAATAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR GCA 90 bp CTTAGCCTCTTAGGTGCACAGTCCCTACAACTTTTATTAACACAGTaGCATCAAAGCAAGCTCCCCACACAATTCACAGGCCTCCGGAAT +
Preference number: 1 (lower is better)
Translates to: LSLLGAQSLQLLLTQ*HQSKLPTQFTGLRN
Trigger: ATTCCGGAGGCCTGTGAATTGTGTGGGGAGCTTGCTTTGATGGCACTGTGTTAATAAAAGTTGTAGGGACTGTGCACCTAAGAGGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR GCA 90 bp ACCTACAAGAAACCACCATTCAGGTGCTTGGATGCTGACCAACACTaGACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATACA +
Preference number: 1 (lower is better)
Translates to: TYKKPPFRCLDADQH*TAFLLDSNSTGYYT
Trigger: TGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTTCTTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 90 bp CATTCAGGTGCTTGGATGCTGACCAACACTGCACAGCCTTCCTACTaGATAGCAATTCTACAGGATACTATACACTCTGTAAGGACTATG +
Preference number: 1 (lower is better)
Translates to: HSGAWMLTNTAQPSY*IAILQDTIHSVRTM
Trigger: CATAGTCCTTACAGAGTGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR TCA 90 bp CATATGAGCTGCAGGCACAAAGGAGGGCAAAGAACTCGATTCAGATaGAGTCTAAGATCCAGGTTGACAAGATTTGTGAAGAATGACGGA +
Preference number: 1 (lower is better)
Translates to: HMSCRHKGGQRTRFR*SLRSRLTRFVKNDG
Trigger: TCCGTCATTCTTCACAAATCTTGTCAACCTGGATCTTAGACTTCATCTGAATCGAGTTCTTTGCCCTCCTTTGTGCCTGCAGCTCATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 90 bp ACATTATACCATGTTAGACCTACAAGAAACCACCATTCAGGTGCTTaGATGCTGACCAACACTGCACAGCCTTCCTACTGGATAGCAATT +
Preference number: 1 (lower is better)
Translates to: TLYHVRPTRNHHSGA*MLTNTAQPSYWIAI
Trigger: AATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTTCTTGTAGGTCTAACATGGTATAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 90 bp TGTAACTTTTGTCATAACGTTGTCAGTGTAACAGCATATTGTTTTTaGAGAGATTCTCCCATCTTGACCAGTGGTACTGGACCAGTGGCG +
Preference number: 1 (lower is better)
Translates to: CNFCHNVVSVTAYCF*RDSPILTSGTGPVA
Trigger: CGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTACACTGACAACGTTATGACAAAAGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CCA 90 bp GAGAGCAGAGGTGGGATCCTTGTTGGACCCGAAAACCATCTTCTTAGCAACTACGTGGTACTGGACCAGTaGCGGCCACAGATCACAAGC +
Preference number: 2 (lower is better)
Translates to: ESRGGILVGPENHLLSNYVVLDQ*RPQITS
Trigger: GCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCAC...GTAGTTGCTAAGAAGATGGTTTTCGGGTCCAACAAGGATCCCACCTCTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR TCA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTAGTGGGGAGTCACGCTaGGGCAGGACACAGAGGCAA +
Preference number: 2 (lower is better)
Translates to: TETEALGMLHTANKMLKPSGESR*GRTQRQ
Trigger: TTGCCTCTGTGTCCTGCCTCAGCGTGACTCCCCACT...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp CATCTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCACTTGACCAGTGGTACTaGACCAGTGGCGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: HLLSNYKPSLQCNHWWRSLDQWY*TSGGHR
Trigger: TCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAG...TGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CAA 90 bp GTTGTCAGTGTAACAGCATATTGTTTTTGGAGAGATTCTCCCATCTaGACCAGTGGTACTGGACCAGTGGCGGCCACAGATCACAAGCCG +
Preference number: 2 (lower is better)
Translates to: VVSVTAYCFWRDSPI*TSGTGPVAATDHKP
Trigger: CGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTACACTGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR TCA 90 bp GGTAATCGTTGCCTTCGTACTAGGAAGCTGGCTGCTGAATCCAATGCTGAAGCAACCACATCACACGTGTaGAATCTTGTGCTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GNRCLRTRKLAAESNAEATTSHV*NLVLLL
Trigger: GAGCAGAAGCACAAGATTTCACACGTGTGATGTGGT...TGCTTCAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAAGGCAACGATTACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CCA 90 bp GCAGCATGGTTCTACAAAGCTGAGTATGCACAGAGACTGAAGCTCTGGGAATGCCTCATCTCCCATTGGTaGCAAAGACCTCCATATGAG +
Preference number: 2 (lower is better)
Translates to: AAWFYKAEYAQRLKLWECLISHW*QRPPYE
Trigger: CTCATATGGAGGTCTTTGCCACCAATGGGAGATGAG...GCATTCCCAGAGCTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CAA 90 bp ACAAGCCGTTCCTGGTCATCCACACCACATCACACGTGTGAAATCTaGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAAT +
Preference number: 2 (lower is better)
Translates to: TSRSWSSTPHHTCEI*CFCSRFQDAHYYAN
Trigger: ATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGAACGGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CAA 90 bp AGTCCAAGATCATACATATGGCAGAGAGCAGAGGTGGGATCCTTGTaGGACCCGAAAACCATCTTCTTAGCAACTACAAACCCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SPRSYIWQRAEVGSL*DPKTIFLATTNPAF
Trigger: GAAGGCTGGGTTTGTAGTTGCTAAGAAGATGGTTTTCGGGTCCAACAAGGATCCCACCTCTGCTCTCTGCCATATGTATGATCTTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR TCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCGGTTCACAGGGCGGATaGGTGGGACCTCTTAGCCTC +
Preference number: 2 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSGSQGG*VGPLSL
Trigger: GAGGCTAAGAGGTCCCACTCATCCGCCCTGTGAACC...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp CCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTACCACATTATACCATGTGATGCTGACCAACACTaGACAGCCTTCCTACTGGAT +
Preference number: 2 (lower is better)
Translates to: PTNEVTEAVCGNYHIIPCDADQH*TAFLLD
Trigger: ATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATC...ACATGGTATAATGTGGTAGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CCA 90 bp GGACAATGGAAGGGACCCTGTGGAGGTAATCGTTGCCTTCGTACTAGGAAGCTGACAGCATATTGTTTTTaGAGAGATTCTCCCATCTTG +
Preference number: 2 (lower is better)
Translates to: GQWKGPCGGNRCLRTRKLTAYCF*RDSPIL
Trigger: CAAGATGGGAGAATCTCTCCAAAAACAATATGCTGT...CAGCTTCCTAGTACGAAGGCAACGATTACCTCCACAGGGTCCCTTCCATTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR TCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTGCAAAGACCTCCATATaGGCTGCAGGCACAAAGGAG +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTAKTSI*AAGTKE
Trigger: CTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGC...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTATGTTGAAACCTCACTaGCAACCCCTAGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLMLKPH*QPLAQE
Trigger: CTCCTGGGCTAGGGGTTGTCAGTGAGGTTTCAACAT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTGATCCCAGATCAATCTaGTCCTTTCTCGCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTDPRSI*SFLALS
Trigger: GGAAAGGGCGAGAAAGGATCAGATTGATCTGGGATC...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCTTCTAGCTAACCGGTaGAAGGGGCCACACTTGTTT +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTLLANR*KGPHLF
Trigger: AAACAAGTGTGGCCCCTTGCACCGGTTAGCTAGAAG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTGACGGAAGAGGTGACTaGACTAGCTTGAAATCTGGC +
Preference number: 2 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLDGRGD*TSLKSG
Trigger: GCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTC...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCGACCTCCATATGAGCTaGAGGCACAAAGGAGGGCAA +
Preference number: 2 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSDLHMS*RHKGGQ
Trigger: TTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTC...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp GAGAGCAGAGGTGGGATCCTTGTTGGACCCGAAAACCATCTTCTTAGCAACTACACACTACTATGCAAATaGTGGGTAGACCTAAATATA +
Preference number: 2 (lower is better)
Translates to: ESRGGILVGPENHLLSNYTLLCK*WVDLNI
Trigger: TATATTTAGGTCTACCCAGCATTTGCATAGTAGTGT...GTAGTTGCTAAGAAGATGGTTTTCGGGTCCAACAAGGATCCCACCTCTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGACAGCACCCTTCCCTTaGACTGCTACACATCACCCA +
Preference number: 2 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQTAPFP*TATHHP
Trigger: TGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGT...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCAGTATGCACAGAGACTaGAGCTCTGGGAATGCTGCA +
Preference number: 2 (lower is better)
Translates to: FCVFSISLVEYSYAANTFSMHRD*SSGNAA
Trigger: TGCAGCATTCCCAGAGCTTCAGTCTCTGTGCATACT...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp GTTATCTACAGCAGGATCCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTCATGAAAACTTTACATaGTCCACAGAACACCAAGTT +
Preference number: 2 (lower is better)
Translates to: VIYSRIPQMRLLKLCVATHENFT*STEHQV
Trigger: AACTTGGTGTTCTGTGGATCATGTAAAGTTTTCATG...AGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGGATCCTGCTGTAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTGGGCTCATCTCCCATTaGTGGCAAAGACCTCCATAT +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITAGLISH*WQRPPY
Trigger: ATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCC...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCCAGAGACTGAAGCTCTaGGAATGCTGCACACAGCTA +
Preference number: 2 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSQRLKL*ECCTQL
Trigger: TAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTG...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTATCCTGAGTTGCGGCTaGGATGAATCTTCAGGATTT +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTILSCG*DESSGF
Trigger: AAATCCTGAAGATTCATCCCAGCCGCAACTCAGGAT...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTTGTTGGATCCTGAGTTaGGGCTGGGATGAATCTTCA +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITACWILS*GWDESS
Trigger: TGAAGATTCATCCCAGCCGCAACTCAGGATCCAACA...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp TGTGTGGCAACTACCACATTATACCATGTTAGACCTACAAGAAACCACCATTCAAGATGCACACTACTATaGAAATGCTGGGTAGACCTA +
Preference number: 2 (lower is better)
Translates to: CVATTTLYHVRPTRNHHSRCTLL*KCWVDL
Trigger: TAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCT...TGAATGGTGGTTTCTTGTAGGTCTAACATGGTATAATGTGGTAGTTGCCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTCCTAGATCGAAAGTTTaGGCTCATCTCCCATTGGTG +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITAPRSKV*AHLPLV
Trigger: CACCAATGGGAGATGAGCCCAAACTTTCGATCTAGG...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTAGAGAATGGCCGCTCTaGGTTGCTTTTGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITAREWPL*VAFVQS
Trigger: ACTCTGAACAAAAGCAACCCAGAGCGGCCATTCTCT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCGTGACTGCACTAGCTTaGAATCTGGCTGTACTTCTA +
Preference number: 2 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSVTALA*NLAVLL
Trigger: TAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCAC...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTTCTGTAAGAAGGGTTTaGTTAGCATCCCCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTSVRRV*LASPEK
Trigger: TTTTTCTGGGGATGCTAAGCAAACCCTTCTTACAGA...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTCTTTTATTAACACAGTaGCATCAAAGCAAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLLLLTQ*HQSKLP
Trigger: GGGGAGCTTGCTTTGATGGCACTGTGTTAATAAAAG...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTACATTTCTTTACAGCTaGTTCACAGGGCGGATGAGT +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITATFLYS*FTGRMS
Trigger: ACTCATCCGCCCTGTGAACCAGCTGTAAAGAAATGT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCAGAACTCGATTCAGATaGAGTCTAAGATCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: FCVFSISLVEYSYAANTFRTRFR*SLRSRL
Trigger: CAACCTGGATCTTAGACTTCATCTGAATCGAGTTCT...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTGATTCTTGTGTGTTGTaGAAGAACCATCTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTDSCVL*KNHLKK
Trigger: TTTCTTGAGATGGTTCTTTCACAACACACAAGAATC...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCAATGCATCAATTCCATaGGATGCCCATGAGGCTATT +
Preference number: 2 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSNASIP*DAHEAI
Trigger: AATAGCCTCATGGGCATCTCATGGAATTGATGCATT...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCTATGGCTTTGCAGCATaGTTCTACAAAGCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: FCVFSISLVEYSYAANTFYGFAA*FYKAEY
Trigger: ATACTCAGCTTTGTAGAACCATGCTGCAAAGCCATA...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCGGAACACACATAAACTaGTTACCTCGGTCAAAACAA +
Preference number: 2 (lower is better)
Translates to: FCVFSISLVEYSYAANTFGTHIN*LPRSKQ
Trigger: TTGTTTTGACCGAGGTAACCAGTTTATGTGTGTTCC...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGTGTCATGAATACAAATaGCAGCCAATTTGGCACCTT +
Preference number: 2 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQCHEYK*QPIWHL
Trigger: AAGGTGCCAAATTGGCTGTCATTTGTATTCATGACA...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCCACTTCTCTATGGATTaGAACACACATAAACTGGTT +
Preference number: 2 (lower is better)
Translates to: FCVFSISLVEYSYAANTFHFSMD*NTHKLV
Trigger: AACCAGTTTATGTGTGTTCCAATCCATAGAGAAGTG...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR GCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTGTCTTTGCAAGGTCTTaGTTCAAATCTTTTGAACAA +
Preference number: 2 (lower is better)
Translates to: KHVQGHLILYLRSSTITAVFARS*FKSFEQ
Trigger: TTGTTCAAAAGATTTGAAGCAAGACCTTGCAAAGAC...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp CTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTaGTCATCCACACCACATCACACGTGTGAAATCTTG +
Preference number: 3 (lower is better)
Translates to: LDQWRPQITSRS*SSTPHHTCEIL
Trigger: CAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 72 bp TTTTTGGAGAGATTCTCCCATCTTGACCAGTGGTACTaGACCAGTGGCGGCCACAGATCACAAGCCGTTCCT +
Preference number: 3 (lower is better)
Translates to: FLERFSHLDQWY*TSGGHRSQAVP
Trigger: AGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR TCA 72 bp AAGCCGTTCCTGGTCATCCACACCACATCACACGTGTaGAATCTTGTGCTTCTGCTCCAGGTTCCAAGATGC +
Preference number: 3 (lower is better)
Translates to: KPFLVIHTTSHV*NLVLLLQVPRC
Trigger: GCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGAACGGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 72 bp CACCTAGATCGAAAGTTTGGGCTCATCTCCCATTGGTaGCAAAGACCTCCATATGAGCTGCAGGCACAAAGG +
Preference number: 3 (lower is better)
Translates to: HLDRKFGLISHW*QRPPYELQAQR
Trigger: CCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGATCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp ACCCACCTAGATCGAAAGTTTGGGCTCATCTCCCATTaGTGGCAAAGACCTCCATATGAGCTGCAGGCACAA +
Preference number: 3 (lower is better)
Translates to: THLDRKFGLISH*WQRPPYELQAQ
Trigger: TTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCAAACTTTCGATCTAGGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATTGGGCTCATCTCCCATaGGTGGCAAAGACCTCCATA +
Preference number: 3 (lower is better)
Translates to: AMKTQHPSLELLHITHLDWAHLP*VAKTSI
Trigger: TATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCA...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp GGTAATCGTTGCCTTCGTACTAGGAAGCTGGCTGCTGAATCCAATGCTGAAGCACACACGTGTGAAATCTaGTGCTTCTGCTCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: GNRCLRTRKLAAESNAEAHTCEI*CFCSRF
Trigger: GAACCTGGAGCAGAAGCACAAGATTTCACACGTGTG...TGCTTCAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAAGGCAACGATTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR GCA 72 bp TCATCTCCCATTGGTGGCAAAGACCTCCATATGAGCTaGAGGCACAAAGGAGGGCAAAGAACTCGATTCAGA +
Preference number: 3 (lower is better)
Translates to: SSPIGGKDLHMS*RHKGGQRTRFR
Trigger: TCTGAATCGAGTTCTTTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTCTTTGCCACCAATGGGAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp ATATTGTTTTTGGAGAGATTCTCCCATCTTGACCAGTaGTACTGGACCAGTGGCGGCCACAGATCACAAGCC +
Preference number: 3 (lower is better)
Translates to: ILFLERFSHLDQ*YWTSGGHRSQA
Trigger: GGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 72 bp CATGTTAGACCTACAAGAAACCACCATTCAGGTGCTTaGATGCTGACCAACACTGCACAGCCTTCCTACTGG +
Preference number: 3 (lower is better)
Translates to: HVRPTRNHHSGA*MLTNTAQPSYW
Trigger: CCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTTCTTGTAGGTCTAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 72 bp CCTGTGGAGGTAATCGTTGCCTTCGTACTAGGAAGCTaGCTGCTGAATCCAATGCTGAAGCACCATAACACA +
Preference number: 3 (lower is better)
Translates to: PVEVIVAFVLGS*LLNPMLKHHNT
Trigger: TGTGTTATGGTGCTTCAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAAGGCAACGATTACCTCCACAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR TCA 72 bp CCGACTCCATGCTATGAAAACACAGCACCCTTCCCTTaGACTGCTACACATCACCCACCTAGATCGAAAGTT +
Preference number: 3 (lower is better)
Translates to: PTPCYENTAPFP*TATHHPPRSKV
Trigger: AACTTTCGATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGCATGGAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR GCA 72 bp AAACCACCATTCAGGTGCTTGGATGCTGACCAACACTaGACAGCCTTCCTACTGGATAGCAATTCTACAGGA +
Preference number: 3 (lower is better)
Translates to: KPPFRCLDADQH*TAFLLDSNSTG
Trigger: TCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CCA 72 bp CTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTaGTGGAGGTCAAGGTTATCTACAGCAGGATCCCAC +
Preference number: 3 (lower is better)
Translates to: LSNYKPSLQCNH*WRSRLSTAGSH
Trigger: GTGGGATCCTGCTGTAGATAACCTTGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CAA 90 bp ATGAGGTTACTGAAGCTGTGTGTGGCAACTACCACATTATACCATGTTAGACCTCCACCATTCAGGTGCTaGGATGCTGACCAACACTGC +
Preference number: 3 (lower is better)
Translates to: MRLLKLCVATTTLYHVRPPPFRC*DADQHC
Trigger: GCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGG...AGGTCTAACATGGTATAATGTGGTAGTTGCCACACACAGCTTCAGTAACCTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCTGCAAGGGGCCACACTaGTTTTCACTGTCAAGCATA +
Preference number: 3 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSCKGPH*FSLSSI
Trigger: TATGCTTGACAGTGAAAACAAGTGTGGCCCCTTGCA...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 72 bp ATCGGTATATGGCTTTGCAGCATGGTTCTACAAAGCTaGGTATGCACAGAGACTGAAGCTCTGGGAATGCTG +
Preference number: 3 (lower is better)
Translates to: IGIWLCSMVLQS*VCTETEALGML
Trigger: CAGCATTCCCAGAGCTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGCAAAGCCATATACCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 72 bp TGCCACAGCAAATGCATCAATTCCATGAGATGCCCATaGGGCTATTCACTGAACTCAGGCTCAAAGCTGATC +
Preference number: 3 (lower is better)
Translates to: CHSKCINSMRCP*GYSLNSGSKLI
Trigger: GATCAGCTTTGAGCCTGAGTTCAGTGAATAGCCTCATGGGCATCTCATGGAATTGATGCATTTGCTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp GCATGGATAACCCCATCGGTATATGGCTTTGCAGCATaGTTCTACAAAGCTGAGTATGCACAGAGACTGAAG +
Preference number: 3 (lower is better)
Translates to: AWITPSVYGFAA*FYKAEYAQRLK
Trigger: CTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGCAAAGCCATATACCGATGGGGTTATCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp TTATTCAAGTTGGAGGAAAATGATGCAGGAGGACAATaGAAGGGACCCTGTGGAGGTAATCGTTGCCTTCGT +
Preference number: 3 (lower is better)
Translates to: LFKLEENDAGGQ*KGPCGGNRCLR
Trigger: ACGAAGGCAACGATTACCTCCACAGGGTCCCTTCCATTGTCCTCCTGCATCATTTTCCTCCAACTTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR GCA 72 bp TTAGGTGCACAGTCCCTACAACTTTTATTAACACAGTaGCATCAAAGCAAGCTCCCCACACAATTCACAGGC +
Preference number: 3 (lower is better)
Translates to: LGAQSLQLLLTQ*HQSKLPTQFTG
Trigger: GCCTGTGAATTGTGTGGGGAGCTTGCTTTGATGGCACTGTGTTAATAAAAGTTGTAGGGACTGTGCACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR GCA 72 bp TCCACACCACATCACACGTGTGAAATCTTGTGCTTCTaGTCCAGGTTCCAAGATGCACACTACTATGCAAAT +
Preference number: 3 (lower is better)
Translates to: STPHHTCEILCF*SRFQDAHYYAN
Trigger: ATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCCACAGCACCCTTCCCTaGAACTGCTACACATCACCC +
Preference number: 3 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSHSTLP*NCYTSP
Trigger: GGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTG...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCCAGTTAAAGTTGTGTaGGATCCTGAGTTGCGGCTG +
Preference number: 3 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTPVKVV*DPELRL
Trigger: CAGCCGCAACTCAGGATCCAACACAACTTTAACTGG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 72 bp GTTAAAGTTGTGTTGGATCCTGAGTTGCGGCTGGGATaGATCTTCAGGATTTCATTCTTCTCTCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: VKVVLDPELRLG*IFRISFFSLLL
Trigger: GAGGAGAAGAGAGAAGAATGAAATCCTGAAGATTCATCCCAGCCGCAACTCAGGATCCAACACAACTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp GATCAAACAATGTATTCCTCCCAGTTAAAGTTGTGTTaGATCCTGAGTTGCGGCTGGGATGAATCTTCAGGA +
Preference number: 3 (lower is better)
Translates to: DQTMYSSQLKLC*ILSCGWDESSG
Trigger: TCCTGAAGATTCATCCCAGCCGCAACTCAGGATCCAACACAACTTTAACTGGGAGGAATACATTGTTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp CATATTAAGGACATTGTAGGAATGGAGATAGTTGCATaGATAACCCCATCGGTATATGGCTTTGCAGCATGG +
Preference number: 3 (lower is better)
Translates to: HIKDIVGMEIVA*ITPSVYGFAAW
Trigger: CCATGCTGCAAAGCCATATACCGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCGCTCTGGGTTGCTTTaGTTCAGAGTTAAAACGGAT +
Preference number: 3 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTRSGLL*FRVKTD
Trigger: ATCCGTTTTAACTCTGAACAAAAGCAACCCAGAGCG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CCA 72 bp TGTCATAACGTTGTCAGTGTAACAGCATATTGTTTTTaGAGAGATTCTCCCATCTTGACCAGTGGTACTGGA +
Preference number: 3 (lower is better)
Translates to: CHNVVSVTAYCF*RDSPILTSGTG
Trigger: TCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTACACTGACAACGTTATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCCATCGGTATATGGCTTaGCAGCATGGTTCTACAAAG +
Preference number: 3 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSHRYMA*QHGSTK
Trigger: CTTTGTAGAACCATGCTGCAAAGCCATATACCGATG...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCGGTAATGAAAGCGTATaGACCAGCATGGGAATAGAG +
Preference number: 3 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSGNESV*TSMGIE
Trigger: CTCTATTCCCATGCTGGTCAATACGCTTTCATTACC...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp CAACTACCACATTATACCATGTTAGACCTACAAGAAACCACCATTCAGGTGCTTCAGTGTAACAGCATATaGTTTTTGGAGAGATTCTCC +
Preference number: 3 (lower is better)
Translates to: QLPHYTMLDLQETTIQVLQCNSI*FLERFS
Trigger: GGAGAATCTCTCCAAAAACAATATGCTGTTACACTG...AAGCACCTGAATGGTGGTTTCTTGTAGGTCTAACATGGTATAATGTGGTAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR-3UTR CAA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTATCTGTAAGAAGGGTTaGCTTAGCATCCCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: KHVQGHLILYLRSSTITAICKKG*LSIPRK
Trigger: TTTTCTGGGGATGCTAAGCAAACCCTTCTTACAGAT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 72 bp ATATATAGTTCCCCTGTAATTCTGTTCCAAGGCTCTTaGAACTTCTGTGTATTTAGCATCTCCCTAGTTGAA +
Preference number: 3 (lower is better)
Translates to: IYSSPVILFQGS*NFCVFSISLVE
Trigger: TTCAACTAGGGAGATGCTAAATACACAGAAGTTTCAAGAGCCTTGGAACAGAATTACAGGGGAACTATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCAGTCTAAGATCCAGGTaGACAAGATTTGTGAAGAAT +
Preference number: 3 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSSLRSR*TRFVKN
Trigger: ATTCTTCACAAATCTTGTCAACCTGGATCTTAGACT...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR TCA 72 bp TTATGTTCACAGTTTGACATGACAAAATGTCATTACTaGATTCCCATTGGACTACAGAGTAGAAACAGAGAA +
Preference number: 3 (lower is better)
Translates to: LCSQFDMTKCHY*IPIGLQSRNRE
Trigger: TTCTCTGTTTCTACTCTGTAGTCCAATGGGAATTCAGTAATGACATTTTGTCATGTCAAACTGTGAACATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp CTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATGCTGGGTACTTTGCGAGGCGCGGTaGAGGGCGCCGCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: LVLLLQVPRCTLLCKCWVLCEAR*RAPPTR
Trigger: TCTCGTCGGCGGCGCCCTGCACCGCGCCTCGCAAAG...TACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATGGCACGCCGAAGGGCTaGACGCCTGGAGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDGTPKG*TPGEGG
Trigger: ACCCCCTTCTCCAGGCGTGCAGCCCTTCGGCGTGCC...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp CTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCAAGGCCCAGCCGAAGGGGGTaGACTCCGCTTGTTCACCGT +
Preference number: 4 (lower is better)
Translates to: LLSNYKPSLQCNHWWRSRPSRRG*TPLVHR
Trigger: ACGGTGAACAAGCGGAGTTCACCCCCTTCGGCTGGG...CCTTGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp GTTATCTACAGCAGGATCCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTGGGCTCCGTATTCCATaGCGCGAGAGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VIYSRIPQMRLLKLCVATGLRIP*RERAAA
Trigger: GGCAGCTGCCCTCTCGCGGCATGGAATACGGAGCCC...AGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGGATCCTGCTGTAGATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATCCATCACTGGTGGCATaGACAGCGGCACGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDPSLVA*TAARRR
Trigger: CCTTCGGCGTGCCGCTGTCCATGCCACCAGTGATGG...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp AGAAACCACCATTCAGGTGCTTGGATGCTGACCAACACTGCACAGCCTTCCTACCTTGACCAGTGGTACTaGACCAGTGGCGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RNHHSGAWMLTNTAQPSYLDQWY*TSGGHR
Trigger: TCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAG...GTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp GCTGACCAACACTGCACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATTCTGGTGTTTGGCTTTaGGAGGCGCGGTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ADQHCTAFLLDSNSTGYYSGVWL*EARCRA
Trigger: CGCCCTGCACCGCGCCTCGCAAAGCCAAACACCAGA...ATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTCCCAGCCGAAGGGGGTaGACTCCGCTTGTTCACCGT +
Preference number: 4 (lower is better)
Translates to: TETEALGMLHTANKMLKPPSRRG*TPLVHR
Trigger: ACGGTGAACAAGCGGAGTTCACCCCCTTCGGCTGGG...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp GGACAATGGAAGGGACCCTGTGGAGGTAATCGTTGCCTTCGTACTAGGAAGCTGGATGCTGACCAACACTaGACAGCCTTCCTACTGGAT +
Preference number: 4 (lower is better)
Translates to: GQWKGPCGGNRCLRTRKLDADQH*TAFLLD
Trigger: ATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATC...CAGCTTCCTAGTACGAAGGCAACGATTACCTCCACAGGGTCCCTTCCATTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp CCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTACCACATTATACCATGTGGGTGCTCTGGTGTTTaGCTTTGCGAGGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTNEVTEAVCGNYHIIPCGCSGV*LCEARC
Trigger: GCACCGCGCCTCGCAAAGCCAAACACCAGAGCACCC...ACATGGTATAATGTGGTAGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp ACCAGTGGTACTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGTCATCCAGTGTAATCACTGGTaGAGGTCAAGGTTATCTACA +
Preference number: 4 (lower is better)
Translates to: TSGTGPVAATDHKPFLVIQCNHW*RSRLST
Trigger: TGTAGATAACCTTGACCTCCACCAGTGATTACACTG...GATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp GCAGCATGGTTCTACAAAGCTGAGTATGCACAGAGACTGAAGCTCTGGGAATGCACAGCACCCTTCCCTTaGACTGCTACACATCACCCA +
Preference number: 4 (lower is better)
Translates to: AAWFYKAEYAQRLKLWECTAPFP*TATHHP
Trigger: TGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGT...GCATTCCCAGAGCTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTCTTTGCGAGGCGCGGTaGAGGGCGCCGCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: KHVQGHLILYLRSSTITALCEAR*RAPPTR
Trigger: TCTCGTCGGCGGCGCCCTGCACCGCGCCTCGCAAAG...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp TGCACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATACACTCTGTAAGCCATCACTGGTGGCATaGACAGCGGCACGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: CTAFLLDSNSTGYYTLCKPSLVA*TAARRR
Trigger: CCTTCGGCGTGCCGCTGTCCATGCCACCAGTGATGG...CTTACAGAGTGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTGGGCTCCGTATTCCATaGCGCGAGAGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLGLRIP*RERAAA
Trigger: GGCAGCTGCCCTCTCGCGGCATGGAATACGGAGCCC...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp GATTCTCCCATCTTGACCAGTGGTACTGGACCAGTGGCGGCCACAGATCACAAGAGATGCACACTACTATaGAAATGCTGGGTAGACCTA +
Preference number: 4 (lower is better)
Translates to: DSPILTSGTGPVAATDHKRCTLL*KCWVDL
Trigger: TAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCT...CTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp ACCAGTGGTACTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGTCATCACAGCATATTGTTTTTaGAGAGATTCTCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: TSGTGPVAATDHKPFLVITAYCF*RDSPIL
Trigger: CAAGATGGGAGAATCTCTCCAAAAACAATATGCTGT...GATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CAA 72 bp TCCTGGTCATCCACACCACATCACACGTGTGAAATCTaGTGCTTCTGCTCCAGGTTCCAAGATGCACACTAC +
Preference number: 4 (lower is better)
Translates to: SWSSTPHHTCEI*CFCSRFQDAHY
Trigger: GTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACACGTGTGATGTGGTGTGGATGACCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp GGTAATCGTTGCCTTCGTACTAGGAAGCTGGCTGCTGAATCCAATGCTGAAGCAAGACCTTCTGGGGTCTaGAAGAACTTCTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GNRCLRTRKLAAESNAEARPSGV*KNFSGN
Trigger: ATTGCCTGAGAAGTTCTTTCAGACCCCAGAAGGTCT...TGCTTCAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAAGGCAACGATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATAGTTGTGTTGGATCCTaGGTTGCGGCTGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDSCVGS*VAAGMN
Trigger: ATTCATCCCAGCCGCAACTCAGGATCCAACACAACT...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTGGTTCACAGGGCGGATaGGTGGGACCTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTGSQGG*VGPLSL
Trigger: GAGGCTAAGAGGTCCCACTCATCCGCCCTGTGAACC...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCGACCTCCATATGAGCTaGAGGCACAAAGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSDLHMS*RHKGGQ
Trigger: TTGCCCTCCTTTGTGCCTGCAGCTCATATGGAGGTC...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp CAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATACACTCTGTAAGGACTGTGGTACTGGACCAGTaGCGGCCACAGATCACAAGC +
Preference number: 4 (lower is better)
Translates to: QPSYWIAILQDTIHSVRTVVLDQ*RPQITS
Trigger: GCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCAC...AGTCCTTACAGAGTGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp CAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATACACTCTGTAAGGACTTCCCATCTTGACCAGTaGTACTGGACCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: QPSYWIAILQDTIHSVRTSHLDQ*YWTSGG
Trigger: GCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGA...AGTCCTTACAGAGTGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp TGTGAAATCTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATGGCAGAGAGCAGAGGTaGGATCCTTGTTGGACCCGA +
Preference number: 4 (lower is better)
Translates to: CEILCFCSRFQDAHYYANGREQR*DPCWTR
Trigger: TCGGGTCCAACAAGGATCCCACCTCTGCTCTCTGCC...ATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAGATTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
3UTR CAA 72 bp GTAACAGCATATTGTTTTTGGAGAGATTCTCCCATCTaGACCAGTGGTACTGGACCAGTGGCGGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: VTAYCFWRDSPI*TSGTGPVAATD
Trigger: ATCTGTGGCCGCCACTGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATGAGTTGCGGCTGGGATaGATCTTCAGGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDELRLG*IFRISF
Trigger: GAATGAAATCCTGAAGATTCATCCCAGCCGCAACTC...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCTCTGGTGTTTGGCTTTaGGAGGCGCGGTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FCVFSISLVEYSYAANTFSGVWL*EARCRA
Trigger: CGCCCTGCACCGCGCCTCGCAAAGCCAAACACCAGA...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTCAGAACGGGAGAAGCTaGGGTCACAGTCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLQNGRS*GHSPGT
Trigger: AGTGCCCGGACTGTGACCGCAGCTTCTCCCGTTCTG...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp CTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATGCTGGGTATGTGGAGGTAATCGTTaGCTTCGTACTAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVLLLQVPRCTLLCKCWVCGGNR*LRTRKL
Trigger: CAGCTTCCTAGTACGAAGGCAACGATTACCTCCACA...TACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCGGGTGCTCTGGTGTTTaGCTTTGCGAGGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: FCVFSISLVEYSYAANTFGCSGV*LCEARC
Trigger: GCACCGCGCCTCGCAAAGCCAAACACCAGAGCACCC...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp GCTGACCAACACTGCACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATCACCATTCAGGTGCTTaGATGCTGACCAACACTGCA +
Preference number: 4 (lower is better)
Translates to: ADQHCTAFLLDSNSTGYYHHSGA*MLTNTA
Trigger: TGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTG...ATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp AGGTGCTTGGATGCTGACCAACACTGCACAGCCTTCCTACTGGATAGCAATTCTGGCAGCAAGATTAAGTaGCTAGTCCAAGATCATACA +
Preference number: 4 (lower is better)
Translates to: RCLDADQHCTAFLLDSNSGSKIK*LVQDHT
Trigger: TGTATGATCTTGGACTAGTCACTTAATCTTGCTGCC...AGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCTGTTGGATCCTGAGTTaGGGCTGGGATGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSCWILS*GWDESS
Trigger: TGAAGATTCATCCCAGCCGCAACTCAGGATCCAACA...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp GTTATCTACAGCAGGATCCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTAAACCACCATTCAGGTaGTTGGATGCTGACCAACAC +
Preference number: 4 (lower is better)
Translates to: VIYSRIPQMRLLKLCVATKPPFR*LDADQH
Trigger: GTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTT...AGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGGATCCTGCTGTAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCCTCATCTCCCATTGGTaGCAAAGACCTCCATATGAG +
Preference number: 4 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSLISHW*QRPPYE
Trigger: CTCATATGGAGGTCTTTGCCACCAATGGGAGATGAG...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp CATCTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCATTCGTACTAGGAAGCTaGCTGCTGAATCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: HLLSNYKPSLQCNHWWRSFVLGS*LLNPML
Trigger: CAGCATTGGATTCAGCAGCCAGCTTCCTAGTACGAA...TGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGAGTGGGGAGTCACGCTaGGGCAGGACACAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQSGESR*GRTQRQ
Trigger: TTGCCTCTGTGTCCTGCCTCAGCGTGACTCCCCACT...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGATGTTGAAACCTCACTaGCAACCCCTAGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSMLKPH*QPLAQE
Trigger: CTCCTGGGCTAGGGGTTGTCAGTGAGGTTTCAACAT...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp AGAAACCACCATTCAGGTGCTTGGATGCTGACCAACACTGCACAGCCTTCCTACCATGAAAACTTTACATaGTCCACAGAACACCAAGTT +
Preference number: 4 (lower is better)
Translates to: RNHHSGAWMLTNTAQPSYHENFT*STEHQV
Trigger: AACTTGGTGTTCTGTGGATCATGTAAAGTTTTCATG...GTAGGAAGGCTGTGCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp GCAGCATGGTTCTACAAAGCTGAGTATGCACAGAGACTGAAGCTCTGGGAATGCTATGGCTTTGCAGCATaGTTCTACAAAGCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: AAWFYKAEYAQRLKLWECYGFAA*FYKAEY
Trigger: ATACTCAGCTTTGTAGAACCATGCTGCAAAGCCATA...GCATTCCCAGAGCTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CAA 72 bp TCCTGTTGGCTGTTTTCAGAAAACCAGGGACATAGCTaGAGGGCTGAGTTAATTCCGGTAGTTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SCWLFSENQGHS*RAELIPVVHLP
Trigger: TGGAAGATGAACTACCGGAATTAACTCAGCCCTCAAGCTATGTCCCTGGTTTTCTGAAAACAGCCAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CAA 72 bp TCATACATATGGCAGAGAGCAGAGGTGGGATCCTTGTaGGACCCGAAAACCATCTTCTTAGCAACTACAAAC +
Preference number: 4 (lower is better)
Translates to: SYIWQRAEVGSL*DPKTIFLATTN
Trigger: GTTTGTAGTTGCTAAGAAGATGGTTTTCGGGTCCAACAAGGATCCCACCTCTGCTCTCTGCCATATGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTATCCTCCGCTTCCTTTaGGTATCCGGGGATTCCACA +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLILRFL*VSGDST
Trigger: TGTGGAATCCCCGGATACTCAAAGGAAGCGGAGGAT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTCAGCTAACAAAATGTTaGAACCTCACTGACAACCCC +
Preference number: 4 (lower is better)
Translates to: TETEALGMLHTANKMLKPQLTKC*NLTDNP
Trigger: GGGGTTGTCAGTGAGGTTTCAACATTTTGTTAGCTG...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTAGTATGCACAGAGACTaGAGCTCTGGGAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTSMHRD*SSGNAA
Trigger: TGCAGCATTCCCAGAGCTTCAGTCTCTGTGCATACT...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATTGTCATGAATACAAATaGCAGCCAATTTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDCHEYK*QPIWHL
Trigger: AAGGTGCCAAATTGGCTGTCATTTGTATTCATGACA...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp CTGAAGCTGTGTGTGGCAACTACCACATTATACCATGTTAGACCTACAAGAAACACCACATCACACGTGTaGAATCTTGTGCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LKLCVATTTLYHVRPTRNTTSHV*NLVLLL
Trigger: GAGCAGAAGCACAAGATTTCACACGTGTGATGTGGT...GTTTCTTGTAGGTCTAACATGGTATAATGTGGTAGTTGCCACACACAGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCCTTTTATTAACACAGTaGCATCAAAGCAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSLLLTQ*HQSKLP
Trigger: GGGGAGCTTGCTTTGATGGCACTGTGTTAATAAAAG...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp CAACTACCACATTATACCATGTTAGACCTACAAGAAACCACCATTCAGGTGCTTATCACAAGCCGTTCCTaGTCATCCACACCACATCAC +
Preference number: 4 (lower is better)
Translates to: QLPHYTMLDLQETTIQVLITSRS*SSTPHH
Trigger: GTGATGTGGTGTGGATGACCAGGAACGGCTTGTGAT...AAGCACCTGAATGGTGGTTTCTTGTAGGTCTAACATGGTATAATGTGGTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp TGCACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATACACTCTGTAAGAGGTGGGATCCTTGTTaGACCCGAAAACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CTAFLLDSNSTGYYTLCKRWDPC*TRKPSS
Trigger: AGAAGATGGTTTTCGGGTCCAACAAGGATCCCACCT...CTTACAGAGTGTATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp GTAACAGCATATTGTTTTTGGAGAGATTCTCCCATCTTGACCAGTGGTACTGGACCAAGATCATACATATaGCAGAGAGCAGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VTAYCFWRDSPILTSGTGPRSYI*QRAEVG
Trigger: TCCCACCTCTGCTCTCTGCCATATGTATGATCTTGG...TCCAGTACCACTGGTCAAGATGGGAGAATCTCTCCAAAAACAATATGCTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR GCA 90 bp GCAGCATGGTTCTACAAAGCTGAGTATGCACAGAGACTGAAGCTCTGGGAATGCGTCTTTGCAAGGTCTTaGTTCAAATCTTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: AAWFYKAEYAQRLKLWECVFARS*FKSFEQ
Trigger: TTGTTCAAAAGATTTGAAGCAAGACCTTGCAAAGAC...GCATTCCCAGAGCTTCAGTCTCTGTGCATACTCAGCTTTGTAGAACCATGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTATGGCCGCTCTGGGTTaGTTTTGTTCAGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TETEALGMLHTANKMLKPMAALG*FCSELK
Trigger: TTTTAACTCTGAACAAAAGCAACCCAGAGCGGCCAT...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCCTAGATCGAAAGTTTaGGCTCATCTCCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTPRSKV*AHLPLV
Trigger: CACCAATGGGAGATGAGCCCAAACTTTCGATCTAGG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGCATGGGAATAGAGAATaGCCGCTCTGGGTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSHGNRE*PLWVAF
Trigger: AAAAGCAACCCAGAGCGGCCATTCTCTATTCCCATG...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTAGACCTTCTGGGGTCTaGAAGAACTTCTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLRPSGV*KNFSGN
Trigger: ATTGCCTGAGAAGTTCTTTCAGACCCCAGAAGGTCT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCAGTGATCACTGCATATaGAGTAATCACATGATCACA +
Preference number: 4 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSSDHCI*SNHMIT
Trigger: TGTGATCATGTGATTACTTCATATGCAGTGATCACT...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCGACGGAAGAGGTGACTaGACTAGCTTGAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSDGRGD*TSLKSG
Trigger: GCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTC...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATAATGTTAAGAGTCTTTaGAAGGTCTTGCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: AMKTQHPSLELLHITHLDNVKSL*KVLLQI
Trigger: GATTTGAAGCAAGACCTTGCAAAGACTCTTAACATT...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTACATTTCTTTACAGCTaGTTCACAGGGCGGATGAGT +
Preference number: 4 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTTFLYS*FTGRMS
Trigger: ACTCATCCGCCCTGTGAACCAGCTGTAAAGAAATGT...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTAGAGAATGGCCGCTCTaGGTTGCTTTTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLREWPL*VAFVQS
Trigger: ACTCTGAACAAAAGCAACCCAGAGCGGCCATTCTCT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp ATGAGGTTACTGAAGCTGTGTGTGGCAACTACCACATTATACCATGTTAGACCTCTTCAGTGTAATCACTaGTGGAGGTCAAGGTTATCT +
Preference number: 4 (lower is better)
Translates to: MRLLKLCVATTTLYHVRPLQCNH*WRSRLS
Trigger: AGATAACCTTGACCTCCACCAGTGATTACACTGAAG...AGGTCTAACATGGTATAATGTGGTAGTTGCCACACACAGCTTCAGTAACCTCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGCCTTGCGTTCCATCTTaGTTCTTGTGTGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSPCVPS*FLCVVK
Trigger: TTTCACAACACACAAGAATCAAGATGGAACGCAAGG...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGGATCCCAGATCAATCTaGTCCTTTCTCGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQDPRSI*SFLALS
Trigger: GGAAAGGGCGAGAAAGGATCAGATTGATCTGGGATC...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTACAAAATGTCATTACTaGATTCCCATTGGACTACAG +
Preference number: 4 (lower is better)
Translates to: TETEALGMLHTANKMLKPTKCHY*IPIGLQ
Trigger: CTGTAGTCCAATGGGAATTCAGTAATGACATTTTGT...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGCTTCTAGCTAACCGGTaGAAGGGGCCACACTTGTTT +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQLLANR*KGPHLF
Trigger: AAACAAGTGTGGCCCCTTGCACCGGTTAGCTAGAAG...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp GTTATCTACAGCAGGATCCCACAAATGAGGTTACTGAAGCTGTGTGTGGCAACTACACTACTATGCAAATaGTGGGTAGACCTAAATATA +
Preference number: 4 (lower is better)
Translates to: VIYSRIPQMRLLKLCVATTLLCK*WVDLNI
Trigger: TATATTTAGGTCTACCCAGCATTTGCATAGTAGTGT...AGTTGCCACACACAGCTTCAGTAACCTCATTTGTGGGATCCTGCTGTAGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CCA 90 bp GCTGACCAACACTGCACAGCCTTCCTACTGGATAGCAATTCTACAGGATACTATCTACTATGCAAATGCTaGGTAGACCTAAATATACTT +
Preference number: 4 (lower is better)
Translates to: ADQHCTAFLLDSNSTGYYLLCKC*VDLNIL
Trigger: AAGTATATTTAGGTCTACCCAGCATTTGCATAGTAG...ATAGTATCCTGTAGAATTGCTATCCAGTAGGAAGGCTGTGCAGTGTTGGTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR TCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTAGAACTCGATTCAGATaGAGTCTAAGATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLRTRFR*SLRSRL
Trigger: CAACCTGGATCTTAGACTTCATCTGAATCGAGTTCT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGACTCAGGCTCAAAGCTaGTCCCAGATCAATCTGATC +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQTQAQS*SQINLI
Trigger: GATCAGATTGATCTGGGATCAGCTTTGAGCCTGAGT...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGTCCATGAGATGCCCATaGGGCTATTCACTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQSMRCP*GYSLNS
Trigger: TGAGTTCAGTGAATAGCCTCATGGGCATCTCATGGA...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTAATGCATCAATTCCATaGGATGCCCATGAGGCTATT +
Preference number: 4 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLNASIP*DAHEAI
Trigger: AATAGCCTCATGGGCATCTCATGGAATTGATGCATT...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGTTGTCTGCAGTTTTATaGTTTCAGCCTAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSLSAVL*FQPRRL
Trigger: AAGTCTCCTAGGCTGAAATCATAAAACTGCAGACAA...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTATCCTGAGTTGCGGCTaGGATGAATCTTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: KHVQGHLILYLRSSTITAILSCG*DESSGF
Trigger: AAATCCTGAAGATTCATCCCAGCCGCAACTCAGGAT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
3UTR CAA 72 bp AAAAATGATCAAACAATGTATTCCTCCCAGTTAAAGTaGTGTTGGATCCTGAGTTGCGGCTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: KNDQTMYSSQLK*CWILSCGWDES
Trigger: AGATTCATCCCAGCCGCAACTCAGGATCCAACACAACTTTAACTGGGAGGAATACATTGTTTGATCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGGTGACTGCACTAGCTTaGAATCTGGCTGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQVTALA*NLAVLL
Trigger: TAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCAC...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTAAGCTCTGGGAATGCTaGACACAGCTAACAAAATGT +
Preference number: 4 (lower is better)
Translates to: KHVQGHLILYLRSSTITAKLWEC*TQLTKC
Trigger: ACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTTTGCTCTGTAAGTTTTaGTCTAGTGATCACTGCATA +
Preference number: 4 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTLLCKF*SSDHCI
Trigger: TATGCAGTGATCACTAGAGCAAAACTTACAGAGCAA...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGTTTTGCTGGATTGTCTaGAGTTTTATGATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSFCWIV*SFMISA
Trigger: GGCTGAAATCATAAAACTGCAGACAATCCAGCAAAA...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGCTGTTCCAAGGCTCTTaGAACTTCTGTGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQLFQGS*NFCVFS
Trigger: GCTAAATACACAGAAGTTTCAAGAGCCTTGGAACAG...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTGGAACACACATAAACTaGTTACCTCGGTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: KHVQGHLILYLRSSTITAGTHIN*LPRSKQ
Trigger: TTGTTTTGACCGAGGTAACCAGTTTATGTGTGTTCC...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCGATTCTTGTGTGTTGTaGAAGAACCATCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FCVFSISLVEYSYAANTFDSCVL*KNHLKK
Trigger: TTTCTTGAGATGGTTCTTTCACAACACACAAGAATC...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR TCA 90 bp TTCTGTGTATTTAGCATCTCCCTAGTTGAATATAGCTATGCTGCTAACACATTCGCAGAAAGATTATTTTaGCCCTCTAACACTAAGTAC +
Preference number: 4 (lower is better)
Translates to: FCVFSISLVEYSYAANTFAERLF*PSNTKY
Trigger: GTACTTAGTGTTAGAGGGTCAAAATAATCTTTCTGC...GAATGTGTTAGCAGCATAGCTATATTCAACTAGGGAGATGCTAAATACACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGTCTGTAAGAAGGGTTTaGTTAGCATCCCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQSVRRV*LASPEK
Trigger: TTTTTCTGGGGATGCTAAGCAAACCCTTCTTACAGA...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CCA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCCACTTCTCTATGGATTaGAACACACATAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSHFSMD*NTHKLV
Trigger: AACCAGTTTATGTGTGTTCCAATCCATAGAGAAGTG...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR GCA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGGAGTTTGTAGATTTTTaGTGGATTGTCTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQEFVDF*WIVCSF
Trigger: AAAACTGCAGACAATCCAGCAAAAATCTACAAACTC...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp TGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGTCATCCACACCACATCAGGGTGCTCTGGTGTTaGGCTTTGCGAGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: WTSGGHRSQAVPGHPHHIRVLWC*ALRGAV
Trigger: CACCGCGCCTCGCAAAGCCAAACACCAGAGCACCCT...GATGTGGTGTGGATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp GTGGTACTGGACCAGTGGCGGCCACAGATCACAAGCCGTTCCTGGTCATCCACACACACGTGTGAAATCTaGTGCTTCTGCTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: VVLDQWRPQITSRSWSSTHTCEI*CFCSRF
Trigger: GAACCTGGAGCAGAAGCACAAGATTTCACACGTGTG...TGTGGATGACCAGGAACGGCTTGTGATCTGTGGCCGCCACTGGTCCAGTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp CATCTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCACTCTGGTGTTTGGCTTaGCGAGGCGCGGTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: HLLSNYKPSLQCNHWWRSLWCLA*RGAVQG
Trigger: GCCCTGCACCGCGCCTCGCAAAGCCAAACACCAGAG...TGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTAGGGTGCTCTGGTGTTaGGCTTTGCGAGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: TETEALGMLHTANKMLKPRVLWC*ALRGAV
Trigger: CACCGCGCCTCGCAAAGCCAAACACCAGAGCACCCT...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCCTAGCCCAGGAGGAATaGCCTCTTCTGCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSLAQEE*PLLLPL
Trigger: CAGGGGGAGCAGAAGAGGCAATTCCTCCTGGGCTAG...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCAAGGTTATCTCCACCATTCAGGTGCTaGGATGCTGACCAACACTGC +
Preference number: 5 (lower is better)
Translates to: SNYKPSLQCNHWWRSRLSPPFRC*DADQHC
Trigger: GCAGTGTTGGTCAGCATCCAAGCACCTGAATGGTGG...AGATAACCTTGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTCTCTGGTGTTTGGCTTaGCGAGGCGCGGTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: KHVQGHLILYLRSSTITALWCLA*RGAVQG
Trigger: GCCCTGCACCGCGCCTCGCAAAGCCAAACACCAGAG...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp GCTATGAAAACACAGCACCCTTCCCTTGAACTGCTACACATCACCCACCTAGATCCAGTTAAAGTTGTGTaGGATCCTGAGTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: AMKTQHPSLELLHITHLDPVKVV*DPELRL
Trigger: CAGCCGCAACTCAGGATCCAACACAACTTTAACTGG...ATCTAGGTGGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTGTTTTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp CTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCAAGGAGAGATTCTCCCATCTaGACCAGTGGTACTGGACCA +
Preference number: 5 (lower is better)
Translates to: LLSNYKPSLQCNHWWRSRRDSPI*TSGTGP
Trigger: TGGTCCAGTACCACTGGTCAAGATGGGAGAATCTCT...CCTTGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCTGCTGCAAGTTCTTTTaGGAAGCAGGCAGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSCCKFF*EAGRGS
Trigger: TGAACCCCTGCCTGCTTCCAAAAAGAACTTGCAGCA...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS CCA 90 bp GTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATGCTaGGTAGACCTAAATATACTTACTCTTGCAACAATGCTTGCGGGG +
Preference number: 5 (lower is better)
Translates to: VLLLQVPRCTLLCKC*VDLNILTLATMLAG
Trigger: CCCCGCAAGCATTGTTGCAAGAGTAAGTATATTTAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCACAGCACCCTTCCCTaGAACTGCTACACATCACCC +
Preference number: 5 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTHSTLP*NCYTSP
Trigger: GGGTGATGTGTAGCAGTTCAAGGGAAGGGTGCTGTG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTAACCAGGGACATAGCTaGAGGGCTGAGTTAATTCCG +
Preference number: 5 (lower is better)
Translates to: TETEALGMLHTANKMLKPNQGHS*RAELIP
Trigger: CGGAATTAACTCAGCCCTCAAGCTATGTCCCTGGTT...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTTGGGCTCATCTCCCATaGGTGGCAAAGACCTCCATA +
Preference number: 5 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTWAHLP*VAKTSI
Trigger: TATGGAGGTCTTTGCCACCAATGGGAGATGAGCCCA...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS GCA 90 bp CTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATaGTGGGTAGACCTAAATATACTTACTCTTGCAACAATGCTTGCG +
Preference number: 5 (lower is better)
Translates to: LVLLLQVPRCTLLCK*WVDLNILTLATMLA
Trigger: CGCAAGCATTGTTGCAAGAGTAAGTATATTTAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCTCTTCTCCTCCATTCTaGATGAAGGGGAATTTGGTT +
Preference number: 5 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSSSPPF*MKGNLV
Trigger: AACCAAATTCCCCTTCATCAAGAATGGAGGAGAAGA...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCTCCTTGCGTTCCATCTaGATTCTTGTGTGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSSLRSI*ILVCCE
Trigger: TTCACAACACACAAGAATCAAGATGGAACGCAAGGA...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTCGCTCTGGGTTGCTTTaGTTCAGAGTTAAAACGGAT +
Preference number: 5 (lower is better)
Translates to: TETEALGMLHTANKMLKPRSGLL*FRVKTD
Trigger: ATCCGTTTTAACTCTGAACAAAAGCAACCCAGAGCG...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp CTTGTGCTTCTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATGCTGGGTACAGTGTAACAGCATATaGTTTTTGGAGAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: LVLLLQVPRCTLLCKCWVQCNSI*FLERFS
Trigger: GGAGAATCTCTCCAAAAACAATATGCTGTTACACTG...TACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAGAAGCACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTTGCAAGGGGCCACACTaGTTTTCACTGTCAAGCATA +
Preference number: 5 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTCKGPH*FSLSSI
Trigger: TATGCTTGACAGTGAAAACAAGTGTGGCCCCTTGCA...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ACAGAGACTGAAGCTCTGGGAATGCTGCACACAGCTAACAAAATGTTGAAACCTTACTTTAATGCGTTATaGTTCTGTTCCTCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: TETEALGMLHTANKMLKPYFNAL*FCSSFP
Trigger: GGGGAACGAGGAACAGAACAATAACGCATTAAAGTA...AGGTTTCAACATTTTGTTAGCTGTGTGCAGCATTCCCAGAGCTTCAGTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCATCGGTATATGGCTTaGCAGCATGGTTCTACAAAG +
Preference number: 5 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTHRYMA*QHGSTK
Trigger: CTTTGTAGAACCATGCTGCAAAGCCATATACCGATG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp TTAGCAATTGTTAACCTTGACCAAGAAGAGAATAAAGACAGCTCGGAGCAACTTTCCTCCCAGTTAAAGTaGTGTTGGATCCTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: LAIVNLDQEENKDSSEQLSSQLK*CWILSC
Trigger: GCAACTCAGGATCCAACACAACTTTAACTGGGAGGA...AAGTTGCTCCGAGCTGTCTTTATTCTCTTCTTGGTCAAGGTTAACAATTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAGAATGACGGAAGAGGTGACTGCACTAGCTTGAAATCTGGCTGTACTTCTAGCATTACTGAATTCCCATaGGACTACAGAGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: KNDGRGDCTSLKSGCTSSITEFP*DYRVET
Trigger: TGTTTCTACTCTGTAGTCCAATGGGAATTCAGTAAT...GCTAGAAGTACAGCCAGATTTCAAGCTAGTGCAGTCACCTCTTCCGTCATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp CATCTTCTTAGCAACTACAAACCCAGCCTTCAGTGTAATCACTGGTGGAGGTCAAACAGCATATTGTTTTaGGAGAGATTCTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: HLLSNYKPSLQCNHWWRSNSILF*ERFSHL
Trigger: AAGATGGGAGAATCTCTCCAAAAACAATATGCTGTT...TGACCTCCACCAGTGATTACACTGAAGGCTGGGTTTGTAGTTGCTAAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS-3UTR CAA 90 bp TCTCATATTAAGGACATTGTAGGAATGGAGATAGTTGCATGGATAACCCCATCGATCTGTAAGAAGGGTTaGCTTAGCATCCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SHIKDIVGMEIVAWITPSICKKG*LSIPRK
Trigger: TTTTCTGGGGATGCTAAGCAAACCCTTCTTACAGAT...CGATGGGGTTATCCATGCAACTATCTCCATTCCTACAATGTCCTTAATATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp ATAAAGACAGCTCGGAGCAACTTCATGTATGACAGCAATTCCTTCAAGACAACTCAAGGGCATCTAATCTaGTATTTGAGGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: IKTARSNFMYDSNSFKTTQGHLI*YLRSST
Trigger: TGTGGAAGACCTCAAATACAAGATTAGATGCCCTTG...AGTTGTCTTGAAGGAATTGCTGTCATACATGAAGTTGCTCCGAGCTGTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCAATGGCCGCTCTGGGTaGCTTTTGTTCAGAGTTAAA +
Preference number: 5 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSNGRSG*LLFRVK
Trigger: TTTAACTCTGAACAAAAGCAACCCAGAGCGGCCATT...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCCTAGGAGACTTCCTGTaGGCTGTTTTCAGAAAACCA +
Preference number: 5 (lower is better)
Translates to: KTCSRASNLVFEVFHNNSLGDFL*AVFRKP
Trigger: TGGTTTTCTGAAAACAGCCAACAGGAAGTCTCCTAG...GCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp TTTGGTTATATGCACCCACATTTAACTACTGTTGCTCACTTTCTTCAAATTCAGGCAAGGGTTCTTACATaGCTCTGTAAGTTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: FGYMHPHLTTVAHFLQIQARVLT*LCKFCS
Trigger: AGAGCAAAACTTACAGAGCAATGTAAGAACCCTTGC...CTGAATTTGAAGAAAGTGAGCAACAGTAGTTAAATGTGGGTGCATATAACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS-3UTR CAA 90 bp AAACATGTTCAAGGGCATCTAATCTTGTATTTGAGGTCTTCCACAATAACAGCTAGTCTAAGATCCAGGTaGACAAGATTTGTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: KHVQGHLILYLRSSTITASLRSR*TRFVKN
Trigger: ATTCTTCACAAATCTTGTCAACCTGGATCTTAGACT...AGCTGTTATTGTGGAAGACCTCAAATACAAGATTAGATGCCCTTGAACATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261438.10
CDS GCA 72 bp CTGCTCCAGGTTCCAAGATGCACACTACTATGCAAATaGTGGGTAGACCTAAATATACTTACTCTTGCAACA +
Preference number: 6 (lower is better)
Translates to: LLQVPRCTLLCK*WVDLNILTLAT
Trigger: TGTTGCAAGAGTAAGTATATTTAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1
CDS CCA 72 bp CTCCAGGTTCCAAGATGCACACTACTATGCAAATGCTaGGTAGACCTAAATATACTTACTCTTGCAACAATG +
Preference number: 6 (lower is better)
Translates to: LQVPRCTLLCKC*VDLNILTLATM
Trigger: CATTGTTGCAAGAGTAAGTATATTTAGGTCTACCCAGCATTTGCATAGTAGTGTGCATCTTGGAACCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514033.1