Pregenerated sensors for KLF2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267275Ensembl transcript IDs: ENST00000588799.1, ENST00000588945.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGACTCCAGACTTCCCATCCATCCAGGGTTCTGCAGCCCTCTCTaGGGCTGGAGCCAATCTCCCCTTCCGTCAAGGGATCCGGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GDSRLPIHPGFCSPL*GWSQSPLPSRDPGR Trigger: TCTCCCCGGATCCCTTGACGGAAGGGGAGATTGGCTCCAGCCTCAGAGAGGGCTGCAGAACCCTGGATGGATGGGAAGTCTGGAGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588799.1 |
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| CDS CCA 90 bp | GTCCCGGCTCATTTGTCAGAGCTATCGGAGCCGTCCTCGGGCTGGTaGGAGTTCAGGGCTCTGAAAGGTTTTCTGTCAAGGCTTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: VPAHLSELSEPSSGW*EFRALKGFLSRLER Trigger: CCTTTCAAGCCTTGACAGAAAACCTTTCAGAGCCCTGAACTCCCACCAGCCCGAGGACGGCTCCGATAGCTCTGACAAATGAGCCGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588799.1 ENST00000588945.1 |
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| CDS CCA 90 bp | ACAGTCCCGGCTCATTTGTCAGAGCTATCGGAGCCGTCCTCGGGCTaGTGGGAGTTCAGGGCTCTGAAAGGTTTTCTGTCAAGGCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: TVPAHLSELSEPSSG*WEFRALKGFLSRLE Trigger: TTCAAGCCTTGACAGAAAACCTTTCAGAGCCCTGAACTCCCACCAGCCCGAGGACGGCTCCGATAGCTCTGACAAATGAGCCGGGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588799.1 ENST00000588945.1 |
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| CDS CCA 72 bp | CATTTGTCAGAGCTATCGGAGCCGTCCTCGGGCTGGTaGGAGTTCAGGGCTCTGAAAGGTTTTCTGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HLSELSEPSSGW*EFRALKGFLSR Trigger: CCTTGACAGAAAACCTTTCAGAGCCCTGAACTCCCACCAGCCCGAGGACGGCTCCGATAGCTCTGACAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588799.1 ENST00000588945.1 |
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| CDS TCA 72 bp | AACCTCTCCACCCCCTCCCGTGGCCGGGTGTTTGGGTaGTGCTGGAAAAATCTTCTAAAGGCAGGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: NLSTPSRGRVFG*CWKNLLKAGRK Trigger: TTTTCTCCCTGCCTTTAGAAGATTTTTCCAGCATCACCCAAACACCCGGCCACGGGAGGGGGTGGAGAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000588945.1 |
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| CDS CCA 72 bp | AAGCACAGCCAAGTAGGGTTTCCCATCCATGAATCCTaGAGACTCCAGACTTCCCATCCATCCAGGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KHSQVGFPIHES*RLQTSHPSRVL Trigger: CAGAACCCTGGATGGATGGGAAGTCTGGAGTCTCCAGGATTCATGGATGGGAAACCCTACTTGGCTGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588799.1 |
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| CDS CCA 72 bp | AAGCACAGCCAAGTAGGGTTTCCATGTTTGTCAAGCTaGTCTCAAACTCTTGAGCTCAAGCGATCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KHSQVGFPCLSS*SQTLELKRSSC Trigger: GCAGGAGGATCGCTTGAGCTCAAGAGTTTGAGACCAGCTTGACAAACATGGAAACCCTACTTGGCTGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588945.1 |
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| CDS CAA 72 bp | GGGCATGAGTCACCGCGCCTAGCCAAGCTGGCCATTTaGGACTCAAGACCTTCACATTTATTCCTAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: GHESPRLAKLAI*DSRPSHLFLEL Trigger: CAATTCTAGGAATAAATGTGAAGGTCTTGAGTCCAAAATGGCCAGCTTGGCTAGGCGCGGTGACTCATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588945.1 |
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| CDS CAA 72 bp | GTTAGCAGGAAGCACAGCCAAGTAGGGTTTCCATGTTaGTCAAGCTGGTCTCAAACTCTTGAGCTCAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: VSRKHSQVGFPC*SSWSQTLELKR Trigger: TCGCTTGAGCTCAAGAGTTTGAGACCAGCTTGACAAACATGGAAACCCTACTTGGCTGTGCTTCCTGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588945.1 |
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