Pregenerated sensors for KLF17 (Homo sapiens)
Ensembl gene IDs: ENSG00000171872Ensembl transcript IDs: ENST00000372299.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCTaGAATACTGCTATGTCCCTTCCTCTCCCTTACATCCTTGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: YLHSHTLAKATLTLT*NTAMSLPLPYILAL Trigger: TAGAGCAAGGATGTAAGGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR GCA 90 bp | CTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCTGAAATACTaGTATGTCCCTTCCTCTCCCTTACATCCTTGCTCTAATCTAATC | + |
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Preference number: 1 (lower is better) Translates to: LSHPSQSHLDSHLKY*YVPSSPLHPCSNLI Trigger: GATTAGATTAGAGCAAGGATGTAAGGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR CCA 90 bp | TTCTGTGTTACTTATAACACAAGTCAGGAACCTGGAAGTCACCCTTaGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: FCVTYNTSQEPGSHP*PHPHLTNPVNYHFP Trigger: AGGAAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCCAGGTTCCTGACTTGTGTTATAAGTAACACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR GCA 90 bp | TCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCTTACATCCTTaGTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: SHLKYCYVPSSPLHP*SNLISMLQPKKTLN Trigger: GTTAAGTGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCAGTTGCCACGTCCAGTaGTCTCAGCCTGGAATCCTC | + |
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Preference number: 2 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPSCHVQ*SQPGIL Trigger: GAGGATTCCAGGCTGAGAGCACTGGACGTGGCAACT...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTTCTCCTCTGAACAGTTaGCACGTCCAGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFSPLNS*HVQCSQ Trigger: CTGAGAGCACTGGACGTGGCAACTGTTCAGAGGAGA...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR TCA 90 bp | ATCGCACCATCCCCTTTACTATCAGAAGCAAGAGTGACAAGTAAATTTCTCAAGTGCAATGGTGAGATCTaGGCTCACTGCAACCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: IAPSPLLSEARVTSKFLKCNGEI*AHCNLR Trigger: GCGGAGGTTGCAGTGAGCTCAGATCTCACCATTGCA...CTTGAGAAATTTACTTGTCACTCTTGCTTCTGATAGTAAAGGGGATGGTGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACTCATAGCCAGGAAATaGCAGAGGCAGGATTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SPLHPCSNLISMLQPKKTLIARK*QRQDSK Trigger: TTTTGAATCCTGCCTCTGCCATTTCCTGGCTATGAG...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR GCA 90 bp | ATCGCACCATCCCCTTTACTATCAGAAGCAAGAGTGACAAGTAAATTTCTCAAGACGGTACCCGCCATATaGCAGGCTAATTTTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: IAPSPLLSEARVTSKFLKTVPAI*QANFCI Trigger: AATACAAAAATTAGCCTGGCATATGGCGGGTACCGT...CTTGAGAAATTTACTTGTCACTCTTGCTTCTGATAGTAAAGGGGATGGTGCGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTCTCCCTACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCCGCGCCGGGCCCAATTaGTGTACTTCTAGTAACATC | + |
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Preference number: 3 (lower is better) Translates to: TSPYLHSHTLAKATLTLTRAGPN*CTSSNI Trigger: GATGTTACTAGAAGTACACAAATTGGGCCCGGCGCG...GGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTAGGGAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR TCA 72 bp | TCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCTaGAATACTGCTATGTCCCTTCCTCTCCCTTACATC | + |
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Preference number: 3 (lower is better) Translates to: SHTLAKATLTLT*NTAMSLPLPYI Trigger: GATGTAAGGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACAGAGCAGGAGCCTGTTTaGCCCACCATTGTAGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SPLHPCSNLISMLQPKKTEQEPV*PTIVVH Trigger: GTGCACTACAATGGTGGGCAAAACAGGCTCCTGCTC...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR CCA 72 bp | ACTTATAACACAAGTCAGGAACCTGGAAGTCACCCTTaGCCTCACCCTCACCTAACAAATCCAGTTAACTAT | + |
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Preference number: 3 (lower is better) Translates to: TYNTSQEPGSHP*PHPHLTNPVNY Trigger: ATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCCAGGTTCCTGACTTGTGTTATAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| 3UTR GCA 72 bp | AAATACTGCTATGTCCCTTCCTCTCCCTTACATCCTTaGTCTAATCTAATCTCCATGTTGCAGCCAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KYCYVPSSPLHP*SNLISMLQPKK Trigger: TTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGAGGAAGGGACATAGCAGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | ACTTCTCCCTACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCGAGTTCTCGTTATCCTaGGCAGCCTGGTGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TSPYLHSHTLAKATLTLTEFSLS*AAWCAA Trigger: GGCGGCGCACCAGGCTGCCCAGGATAACGAGAACTC...GGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTAGGGAGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR TCA 90 bp | ACTTCTCCCTACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCTCATCCGGGAAGGAGTaGGAGTCGCTTGGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TSPYLHSHTLAKATLTLTSSGKE*ESLGGS Trigger: ACTGCCCCCAAGCGACTCTCACTCCTTCCCGGATGA...GGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTAGGGAGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCGGAGCAGGTCCGGGCTaGTCTGGTAGAAATGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPGAGPG*SGRNGP Trigger: AGGCCCATTTCTACCAGAGCAGCCCGGACCTGCTCC...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | ACTTCTCCCTACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCGCCTTCTTGAGAGTCTaGCTGACTGACAAGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSPYLHSHTLAKATLTLTAFLRV*LTDKRV Trigger: GACTCTCTTGTCAGTCAGCCAGACTCTCAAGAAGGC...GGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTAGGGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCCTGTGTGCTTGCGCTaGTGGCTCACGAGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFPVCLR*WLTRWE Trigger: CTCCCACCTCGTGAGCCACCAGCGCAAGCACACAGG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCTCTCCTCTGAACAGTTaGCACGTCCAGTGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPSPLNS*HVQCSQ Trigger: CTGAGAGCACTGGACGTGGCAACTGTTCAGAGGAGA...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTGCCAGGGTAAGGCACTaGAGGGTTCCCAGTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFARVRH*RVPSVG Trigger: TCCCACACTGGGAACCCTCCAGTGCCTTACCCTGGC...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCCTCCATTGTTGTTGTTaGCCTGTGGGTCTGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPLHCCC*PVGLRV Trigger: GACCCTCAGACCCACAGGCCAACAACAACAATGGAG...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCCACAAGTCAGGAACCTaGAAGTCACCCTTGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPHKSGT*KSPLAS Trigger: TGAGGCCAAGGGTGACTTCCAGGTTCCTGACTTGTG...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCGAGACAAGGTCACACTaGTCTCAAACTCCTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPETRSH*SQTPGL Trigger: GAGGCCAGGAGTTTGAGACCAGTGTGACCTTGTCTC...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACAGTTGGCCTGTGGGTCTaGGGGTCCCGGCCGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTVGLWV*GSRPMS Trigger: ACTCATCGGCCGGGACCCTCAGACCCACAGGCCAAC...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCGGAGGGTTCCCAGTGTaGGACATTATTGGGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPGGFPV*DIIGIP Trigger: TGGAATCCCAATAATGTCCCACACTGGGAACCCTCC...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCCTTCATTCACATTCTaGCCCGGCGCCTCAACAGAC | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFPSFTF*PGASTD Trigger: GTCTGTTGAGGCGCCGGGGCAGAATGTGAATGAAGG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCTCTCACCTGAAATACTaGTATGTCCCTTCCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPSHLKY*YVPSSP Trigger: GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGA...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCAGTGTGGGACATTATTaGGATTCCAGTGGAAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPSVGHY*DSSGSR Trigger: TCGGCTTCCACTGGAATCCCAATAATGTCCCACACT...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACAGTGTGCTTGCGCTGGTaGCTCACGAGGTGGGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTVCLRW*LTRWER Trigger: ACGCTCCCACCTCGTGAGCCACCAGCGCAAGCACAC...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCCTGGAAGTCACCCTTaGCCTCACCCTCACCTAACA | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFPGSHP*PHPHLT Trigger: TGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCCAGG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | ATCGCACCATCCCCTTTACTATCAGAAGCAAGAGTGACAAGTAAATTTCTCAAGGGCATCCCAAGGTCATaGGCATCTTGCGGGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: IAPSPLLSEARVTSKFLKGIPRS*ASCGGN Trigger: GTTGCCCCCGCAAGATGCCCATGACCTTGGGATGCC...CTTGAGAAATTTACTTGTCACTCTTGCTTCTGATAGTAAAGGGGATGGTGCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTGCAGGAGGACTGTCCTaGTCTCCATTGTTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFAGGLS*SPLLLL Trigger: CAACAACAACAATGGAGAGCAGGACAGTCCTCCTGC...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACTTCTCTACTGTCTGTaGAGCAGGTCCGGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTLLYCL*SRSGLL Trigger: GAGCAGCCCGGACCTGCTCCACAGACAGTAGAGAAG...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCTATATGGTCGATATCTaGTGTGTACCCGCATATGTC | + |
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Preference number: 4 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPYMVDI*CVPAYV Trigger: GACATATGCGGGTACACACCAGATATCGACCATATA...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACATGCAATGGTGAGATCTaGGCTCACTGCAACCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTCNGEI*AHCNLR Trigger: GCGGAGGTTGCAGTGAGCTCAGATCTCACCATTGCA...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACATGTTCCATCTCAGCCTaGGGTCGGCCGTACATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTCSISA*GRPYMK Trigger: CTTCATGTACGGCCGACCGCAGGCTGAGATGGAACA...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACAGGGCCTGGCTACCCTTaGAATATTGGGCTCTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTGPGYP*NIGLSY Trigger: GTAGGAGAGCCCAATATTCCAAGGGTAGCCAGGCCC...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | ATCGCACCATCCCCTTTACTATCAGAAGCAAGAGTGACAAGTAAATTTCTCAAGTCCCACCGAAGGGCCTaGCTACCCTTGGAATATTGG | + |
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Preference number: 4 (lower is better) Translates to: IAPSPLLSEARVTSKFLKSHRRA*LPLEYW Trigger: CCAATATTCCAAGGGTAGCCAGGCCCTTCGGTGGGA...CTTGAGAAATTTACTTGTCACTCTTGCTTCTGATAGTAAAGGGGATGGTGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACAAGACTGGCAGCCCATTaGGGGGCATCCTTAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTRLAAH*GASLDS Trigger: GGAATCTAAGGATGCCCCCCAATGGGCTGCCAGTCT...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCTCATAGCCAGGAAATaGCAGAGGCAGGATTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFLIARK*QRQDSK Trigger: TTTTGAATCCTGCCTCTGCCATTTCCTGGCTATGAG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTACGGTACCCGCCATATaGCAGGCTAATTTTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFTVPAI*QANFCI Trigger: AATACAAAAATTAGCCTGGCATATGGCGGGTACCGT...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACTACCCTTGGAATATTaGGCTCTCCTACGGGCATTA | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTLPLEY*ALLRAL Trigger: TAATGCCCGTAGGAGAGCCCAATATTCCAAGGGTAG...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACCAGTTGCAAGAATATaGCCTCTCACCTGTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTPVARI*PLTCVL Trigger: AAGCACACAGGTGAGAGGCCATATTCTTGCAACTGG...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACACTGGTCTCAAACTCCTaGCCTCAAGTTATCCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SPLHPCSNLISMLQPKKTLVSNS*PQVILR Trigger: CCTTAGGATAACTTGAGGCCAGGAGTTTGAGACCAG...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | ACTTCTCCCTACCTCCACTCTCACACCCTAGCCAAAGCCACCTTGACTCTCACCGAGCAGGAGCCTGTTTaGCCCACCATTGTAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TSPYLHSHTLAKATLTLTEQEPV*PTIVVH Trigger: GTGCACTACAATGGTGGGCAAAACAGGCTCCTGCTC...GGTGAGAGTCAAGGTGGCTTTGGCTAGGGTGTGAGAGTGGAGGTAGGGAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | AGCCAAAGCCACCTTGACTCTCACCTGAAATACTGCTATGTCCCTTCCTCTCCCCGCGCCGGGCCCAATTaGTGTACTTCTAGTAACATC | + |
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Preference number: 5 (lower is better) Translates to: SQSHLDSHLKYCYVPSSPRAGPN*CTSSNI Trigger: GATGTTACTAGAAGTACACAAATTGGGCCCGGCGCG...GGGAGAGGAAGGGACATAGCAGTATTTCAGGTGAGAGTCAAGGTGGCTTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCTGTCCTGCTCTCCATaGTTGTTGTTGGCCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFLSCSP*LLLACG Trigger: CCCACAGGCCAACAACAACAATGGAGAGCAGGACAG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTCAGTGTGGGACATTATaGGGATTCCAGTGGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFQCGTL*GFQWKP Trigger: CGGCTTCCACTGGAATCCCAATAATGTCCCACACTG...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTCACCCTTGGCCTCACCCTCACCTAACAAATCCAGTTAACTATCACTTTTCCTGCTCTCCATTGTaGTTGTTGGCCTGTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSHPWPHPHLTNPVNYHFSCSPL*LLACGS Trigger: AGACCCACAGGCCAACAACAACAATGGAGAGCAGGA...AAAGTGATAGTTAACTGGATTTGTTAGGTGAGGGTGAGGCCAAGGGTGACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | ATCGCACCATCCCCTTTACTATCAGAAGCAAGAGTGACAAGTAAATTTCTCAAGGCTACCCTTGGAATATaGGGCTCTCCTACGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: IAPSPLLSEARVTSKFLKATLGI*GSPTGI Trigger: AATGCCCGTAGGAGAGCCCAATATTCCAAGGGTAGC...CTTGAGAAATTTACTTGTCACTCTTGCTTCTGATAGTAAAGGGGATGGTGCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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| CDS-3UTR CAA 90 bp | TCTCCCTTACATCCTTGCTCTAATCTAATCTCCATGTTGCAGCCAAAGAAAACATGCTCTCCATTGTTGTaGTTGGCCTGTGGGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SPLHPCSNLISMLQPKKTCSPLL*LACGSE Trigger: CTCAGACCCACAGGCCAACAACAACAATGGAGAGCA...TGTTTTCTTTGGCTGCAACATGGAGATTAGATTAGAGCAAGGATGTAAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372299.4 |
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