RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLF13 (Homo sapiens)

Ensembl gene IDs: ENSG00000169926

Ensembl transcript IDs: ENST00000307145.4, ENST00000500533.3, ENST00000558225.1, ENST00000558921.1, ENST00000560473.1, ENST00000616962.1, ENST00000621843.1

Found 686 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGACACGGAGAAGCGGAGTCCTGGCAGGTGTGACCCCGGCCCCTaGCTCGGAGGTCGGACGGTGCAGTGCTACGCTCAGCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: WDTEKRSPGRCDPGP*LGGRTVQCYAQPGL
Trigger: CAGCCCTGGCTGAGCGTAGCACTGCACCGTCCGACCTCCGAGGCAGGGGCCGGGGTCACACCTGCCAGGACTCCGCTTCTCCGTGTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp CTCTGCTCCTCCTCTCCTGCCAGGAGAAGGCCGGTGATGGGGCACTaGAGCAGCCCCACCAGCTGGGTGTGGCCTGGAGCCTCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: LCSSSPARRRPVMGH*SSPTSWVWPGASRQ
Trigger: CTGCCTGGAGGCTCCAGGCCACACCCAGCTGGTGGGGCTGCTCCAGTGCCCCATCACCGGCCTTCTCCTGGCAGGAGAGGAGGAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CTGGGCAGATCACAAGGACGTCTGACCCCTCCCTGGAGAGCACTTTaGCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCTGCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: LGRSQGRLTPPWRAL*QPPRDGPLPLPALG
Trigger: CCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGATCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TCAGGAGGGTCTGGCCAGGAGTACCCAGGAGGATTTCTCTCCTGGTaGCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGC +
Preference number: 1 (lower is better)
Translates to: SGGSGQEYPGGFLSW*PTPISQSRPGPKDR
Trigger: GCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCCTGGGTACTCCTGGCCAGACCCTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp TTCCGTGACACCCTGGGCAGATCACAAGGACGTCTGACCCCTCCCTaGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCTCTC +
Preference number: 1 (lower is better)
Translates to: FRDTLGRSQGRLTPP*RALCQPPRDGPLPL
Trigger: GAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGATCTGCCCAGGGTGTCACGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp GGCCTGGGTCCTGGGTTTGTGCTGCACCCCATAGCATGGCAGGGCTaGGTAGAAGCAGGATGGCCACAACCAAGGCACGCTAGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: GLGPGFVLHPIAWQG*VEAGWPQPRHARPR
Trigger: CCTGGGCCTAGCGTGCCTTGGTTGTGGCCATCCTGCTTCTACTCAGCCCTGCCATGCTATGGGGTGCAGCACAAACCCAGGACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp GAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCTaGCTTGGGGAACGGTGGACGGTGAGTGCACCAAAGGACTTTGGA +
Preference number: 1 (lower is better)
Translates to: ESTLPASQGRATPSP*LGERWTVSAPKDFG
Trigger: TCCAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CAAGGACTGGGATCGCCAGTGCCTCAGATGTTTGTACCCGGAGGCTaGACCATGGCGAATCCTGCACCTGCCTCGGTGTGGGGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: QGLGSPVPQMFVPGG*TMANPAPASVWGLG
Trigger: TCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp AATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCAGTaGAGGCAGCGTTCCAAGGCCCACCACCCTCTTCCACAGGAGTCC +
Preference number: 1 (lower is better)
Translates to: NGGCFRRVRLVCPPQ*RQRSKAHHPLPQES
Trigger: GGACTCCTGTGGAAGAGGGTGGTGGGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CATCAGAGGCCCAGGTATAGTAGTGACAGGGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGGAGTCCTGGCAGGTGTGACCCCGGC +
Preference number: 1 (lower is better)
Translates to: HQRPRYSSDRVLHAF*WDTEKRSPGRCDPG
Trigger: GCCGGGGTCACACCTGCCAGGACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTACTATACCTGGGCCTCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp GGTCCCGAGGGAGTGCCGGGACCCTGTGCAGTCCATCTTAGCACCTaGTTCTGGCAAGAAAGAGGCTGGTCTTCTGGACACACCGGGTGG +
Preference number: 1 (lower is better)
Translates to: GPEGVPGPCAVHLST*FWQERGWSSGHTGW
Trigger: CCACCCGGTGTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGACTGCACAGGGTCCCGGCACTCCCTCGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp CCAGACCCAATGCAAGCAGGGAGGTCAGAGAGCCCCAACACAGCATaGCAGCCAGAGGGACCAGCTCCGCATCCAACCAGAGTGGAGGTG +
Preference number: 1 (lower is better)
Translates to: PDPMQAGRSESPNTA*QPEGPAPHPTRVEV
Trigger: CACCTCCACTCTGGTTGGATGCGGAGCTGGTCCCTCTGGCTGCCATGCTGTGTTGGGGCTCTCTGACCTCCCTGCTTGCATTGGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GATTCAGGAGGGTCTGGCCAGGAGTACCCAGGAGGATTTCTCTCCTaGTGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGAC +
Preference number: 1 (lower is better)
Translates to: DSGGSGQEYPGGFLS*CPTPISQSRPGPKD
Trigger: GTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCCTGGGTACTCCTGGCCAGACCCTCCTGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp GATCACATCTTCCTGTTGGGTGGCACCCCTGCCCAGCTGAGATCCTaGATGGGTCCCGAGGGAGTGCCGGGACCCTGTGCAGTCCATCTT +
Preference number: 1 (lower is better)
Translates to: DHIFLLGGTPAQLRS*MGPEGVPGPCAVHL
Trigger: AAGATGGACTGCACAGGGTCCCGGCACTCCCTCGGGACCCATTCAGGATCTCAGCTGGGCAGGGGTGCCACCCAACAGGAAGATGTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp AGGTGGAGTGCTCCTCCAGCCAGGGACAGCTTTAAGGCATCCCTCTaGAGGGGCCTGTCTCAGAATCAGCTGCGTTGCAAGCCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: RWSAPPARDSFKASL*RGLSQNQLRCKPSQ
Trigger: CTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAAGCTGTCCCTGGCTGGAGGAGCACTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GTACCCGGAGGCTGCACCATGGCGAATCCTGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCAGGGTTAGGAGTGAGGCGATCTTGC +
Preference number: 1 (lower is better)
Translates to: VPGGCTMANPAPASV*GLGIKSGLGVRRSC
Trigger: GCAAGATCGCCTCACTCCTAACCCTGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GAGGGAGTGCCGGGACCCTGTGCAGTCCATCTTAGCACCTGCTTCTaGCAAGAAAGAGGCTGGTCTTCTGGACACACCGGGTGGGGAGAC +
Preference number: 1 (lower is better)
Translates to: EGVPGPCAVHLSTCF*QERGWSSGHTGWGD
Trigger: GTCTCCCCACCCGGTGTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGACTGCACAGGGTCCCGGCACTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TGCTTAGGAATCTGCCCTGGAGGCACAAACGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGGCTGGCCAGCCAGCCAGACGCTGAG +
Preference number: 1 (lower is better)
Translates to: CLGICPGGTNVSEHI*SQQTHRLASQPDAE
Trigger: CTCAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCTCCAGGGCAGATTCCTAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp GTTGGGGGCTGGGCAGGAAGAGGTCAGGCCAGCTGCTTAGGAATCTaGCCTGGAGGCACAAACGTCAGTGAGCACATCTGCTCCCAACAG +
Preference number: 1 (lower is better)
Translates to: VGGWAGRGQASCLGI*PGGTNVSEHICSQQ
Trigger: CTGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCTCCAGGGCAGATTCCTAAGCAGCTGGCCTGACCTCTTCCTGCCCAGCCCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TTTAAGGCATCCCTCTGCAGGGGCCTGTCTCAGAATCAGCTGCGTTaGAAGCCCAGCCAGGCTCGTTGGGCAGAGGCCAGAGACTGGGTT +
Preference number: 1 (lower is better)
Translates to: FKASLCRGLSQNQLR*KPSQARWAEARDWV
Trigger: AACCCAGTCTCTGGCCTCTGCCCAACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp ACAGCTTTAAGGCATCCCTCTGCAGGGGCCTGTCTCAGAATCAGCTaGGTTGCAAGCCCAGCCAGGCTCGTTGGGCAGAGGCCAGAGACT +
Preference number: 1 (lower is better)
Translates to: TALRHPSAGACLRIS*VASPARLVGQRPET
Trigger: AGTCTCTGGCCTCTGCCCAACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp GTGTGGGGCCTGGGAATAAAGTCAGGGTTAGGAGTGAGGCGATCTTaGACTCGAGTGTCGTGGGTGGGGGTGCAGCAGGATGCAGGTAGG +
Preference number: 1 (lower is better)
Translates to: VWGLGIKSGLGVRRS*TRVSWVGVQQDAGR
Trigger: CCTACCTGCATCCTGCTGCACCCCCACCCACGACACTCGAGTGCAAGATCGCCTCACTCCTAACCCTGACTTTATTCCCAGGCCCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GTGCTCACGCGCGCACACACCCACACGCACGCACACACTCTGTCCTaGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAG +
Preference number: 1 (lower is better)
Translates to: VLTRAHTHTHAHTLS*ALVFTGLNSQEEGK
Trigger: CTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGTGGGTGTGTGCGCGCGTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp CACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCTGCCTTaGGGAACGGTGGACGGTGAGTGCACCAAAGGACTTTGGAATAAA +
Preference number: 1 (lower is better)
Translates to: HFASLPGTGHSLSLP*GTVDGECTKGLWNK
Trigger: TTTATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CCAGAATTCCCCATCAGAGGCCCAGGTATAGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACACGGAGAAGCGGAGTCCTGGCAGGT +
Preference number: 1 (lower is better)
Translates to: PEFPIRGPGIVVTGS*MPSAGTRRSGVLAG
Trigger: ACCTGCCAGGACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTACTATACCTGGGCCTCTGATGGGGAATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp AGTGGTAAGAAGCGGGCACCTGACGGCATACTGTGCCTGAGCAGCTaGTGTGGACAGAGCGTACCTGTCCACTCTGGAGCCAGCCAAAAC +
Preference number: 1 (lower is better)
Translates to: SGKKRAPDGILCLSS*CGQSVPVHSGASQN
Trigger: GTTTTGGCTGGCTCCAGAGTGGACAGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGGTGCCCGCTTCTTACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CAGCTGACACACAGTGGTAAGAAGCGGGCACCTGACGGCATACTGTaGCTGAGCAGCTGCTGTGGACAGAGCGTACCTGTCCACTCTGGA +
Preference number: 1 (lower is better)
Translates to: QLTHSGKKRAPDGIL*LSSCCGQSVPVHSG
Trigger: TCCAGAGTGGACAGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGGTGCCCGCTTCTTACCACTGTGTGTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp AGTGCCTCAGATGTTTGTACCCGGAGGCTGCACCATGGCGAATCCTaGACCTGCCTCGGTGTGGGGCCTGGGAATAAAGTCAGGGTTAGG +
Preference number: 1 (lower is better)
Translates to: SASDVCTRRLHHGES*TCLGVGPGNKVRVR
Trigger: CCTAACCCTGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TGGTCTGAGCTGTGTTCAGGGTGCTGCAAGGACTGGGATCGCCAGTaGCTCAGATGTTTGTACCCGGAGGCTGCACCATGGCGAATCCTG +
Preference number: 1 (lower is better)
Translates to: WSELCSGCCKDWDRQ*LRCLYPEAAPWRIL
Trigger: CAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTCAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GCCTCCCAGGGACGGGCCACTCCCTCTCCCTGCCTTGGGGAACGGTaGACGGTGAGTGCACCAAAGGACTTTGGAATAAAATTCCTGAAC +
Preference number: 1 (lower is better)
Translates to: ASQGRATPSPCLGER*TVSAPKDFGIKFLN
Trigger: GTTCAGGAATTTTATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp ATCACCCCTCACTGGTCTGAGCTGTGTTCAGGGTGCTGCAAGGACTaGGATCGCCAGTGCCTCAGATGTTTGTACCCGGAGGCTGCACCA +
Preference number: 1 (lower is better)
Translates to: ITPHWSELCSGCCKD*DRQCLRCLYPEAAP
Trigger: TGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTCAGACCAGTGAGGGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATaGACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCCATGAC +
Preference number: 1 (lower is better)
Translates to: LLLQNGLCEAWCAAT*TAAHTDPLMRRPHD
Trigger: GTCATGGGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp ATGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTaGCCGCCTCAGTGGAGGCAGCGTTCCAAGGCCCACCACCCTCTT +
Preference number: 1 (lower is better)
Translates to: MFEENGGCFRRVRLV*PPQWRQRSKAHHPL
Trigger: AAGAGGGTGGTGGGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TCAGATGTTTGTACCCGGAGGCTGCACCATGGCGAATCCTGCACCTaGCTCGGTGTGGGGCCTGGGAATAAAGTCAGGGTTAGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: SDVCTRRLHHGESCT*LGVGPGNKVRVRSE
Trigger: CTCACTCCTAACCCTGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp CTCAACTCTCAGGAGGAAGGGAAGGTGATACCTGGGCCACAAGCCTaGGTCAACACTCCAGCCATCTGCAGAGGAGTTTGCTGGACCACG +
Preference number: 1 (lower is better)
Translates to: LNSQEEGKVIPGPQA*VNTPAICRGVCWTT
Trigger: CGTGGTCCAGCAAACTCCTCTGCAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTGAGAGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp GGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCTGGGTCAACACTCCAGCCATCTGCA +
Preference number: 1 (lower is better)
Translates to: GPLYLQASTLRRKGR*YLGHKPGSTLQPSA
Trigger: TGCAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CATGTTCCCATCCAGGACATCTCTGCCCATTCCTATGCAGCATCCTaGAGGACAGGACCCCAGGGCTCTTTAAGGAAAGGGCTGTGTCCG +
Preference number: 1 (lower is better)
Translates to: HVPIQDISAHSYAAS*RTGPQGSLRKGLCP
Trigger: CGGACACAGCCCTTTCCTTAAAGAGCCCTGGGGTCCTGTCCTGCAGGATGCTGCATAGGAATGGGCAGAGATGTCCTGGATGGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp CCCTGTGCAGTCCATCTTAGCACCTGCTTCTGGCAAGAAAGAGGCTaGTCTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTC +
Preference number: 1 (lower is better)
Translates to: PCAVHLSTCFWQERG*SSGHTGWGDRTLEV
Trigger: GACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGACTGCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp GTCCAAGTCACAATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTaGAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCC +
Preference number: 1 (lower is better)
Translates to: VQVTMFRSLATEWSL*SMVRCHMHSRSHRP
Trigger: GGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTGTGACTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp CAATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGG +
Preference number: 1 (lower is better)
Translates to: QCSGLLLQNGLCEAW*AATCTAAHTDPLMR
Trigger: CCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TGTCAAGGTCCCTACCAAATATTCCACTCTCTCTCCCAGACCCAATaGAAGCAGGGAGGTCAGAGAGCCCCAACACAGCATGGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: CQGPYQIFHSLSQTQ*KQGGQRAPTQHGSQ
Trigger: CTGGCTGCCATGCTGTGTTGGGGCTCTCTGACCTCCCTGCTTGCATTGGGTCTGGGAGAGAGAGTGGAATATTTGGTAGGGACCTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp TGGGTTTCTCCCTGCCCTTCAAGCGAGATGAGTTTAAGCCGCAGATaGTTCAGGAGGGTCTGGCCAGGAGTACCCAGGAGGATTTCTCTC +
Preference number: 1 (lower is better)
Translates to: WVSPCPSSEMSLSRR*FRRVWPGVPRRISL
Trigger: GAGAGAAATCCTCCTGGGTACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAAGGGCAGGGAGAAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 90 bp TTGCCCGCAACTTTCTATCTGGCATTCCCTGCGGAGGAAATAGAATaGGCGCTCTCCGACAGCATTTCCTGTAACATCCGCGCCACTCCT +
Preference number: 1 (lower is better)
Translates to: LPATFYLAFPAEEIE*ALSDSISCNIRATP
Trigger: AGGAGTGGCGCGGATGTTACAGGAAATGCTGTCGGAGAGCGCGCATTCTATTTCCTCCGCAGGGAATGCCAGATAGAAAGTTGCGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp TCACAATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATaGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATG +
Preference number: 1 (lower is better)
Translates to: SQCSGLLLQNGLCEA*CAATCTAAHTDPLM
Trigger: CATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp TGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAACACTCCAGCCATCTGCAGAGGAGT +
Preference number: 1 (lower is better)
Translates to: CIYRPQLSGGREGDT*ATSLGQHSSHLQRS
Trigger: ACTCCTCTGCAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp GCAGGAAGGGGTGTCCTCACTGACCTCGTGAAACGTGTCCATCCCTaGGAAAGGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGT +
Preference number: 1 (lower is better)
Translates to: AGRGVLTDLVKRVHP*ERGFNNAESQLCGC
Trigger: ACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGACACCCCTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp ATGTACAGAGTAAGGCGGCAGGAAGGGGTGTCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAGAAAGGGGGTTCAACAACGCTGAAT +
Preference number: 1 (lower is better)
Translates to: MYRVRRQEGVSSLTS*NVSIPEKGGSTTLN
Trigger: ATTCAGCGTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGACACCCCTTCCTGCCGCCTTACTCTGTACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GAGTCCAGGGGAAACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTaGGGACATGGTGGGTCTGAGAAAAGTGTTGCCCGCAACTTTCTA +
Preference number: 1 (lower is better)
Translates to: ESRGNGEAGGLLSLS*GHGGSEKSVARNFL
Trigger: TAGAAAGTTGCGGGCAACACTTTTCTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCCCCTGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp CACACGAAAACAACTTTGGGAGGGACCTCACTTTGGAACTGGGCATaGAGATCTTTGCACCACAAGCACCCAGGGCTCTCTTCTGTCAAG +
Preference number: 1 (lower is better)
Translates to: HTKTTLGGTSLWNWA*RSLHHKHPGLSSVK
Trigger: CTTGACAGAAGAGAGCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp GCTCAGGCGTGTATCAGTAGTAAGGTGGACTATGCATCCAAGTTCTaGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGC +
Preference number: 1 (lower is better)
Translates to: AQACISSKVDYASKF*YKGLRNVSQTSLQS
Trigger: GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCATAGTCCACCTTACTACTGATACACGCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 90 bp CCTCGTGAAACGTGTCCATCCCTGAGAAAGGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTGGTGGGT +
Preference number: 1 (lower is better)
Translates to: PRETCPSLRKGVQQR*ISTLWVYLLCNLVG
Trigger: ACCCACCAAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTTCACGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 90 bp ATGTATTCAGAGTGTGGCTTTCTCTGCCTCACACGAAAACAACTTTaGGAGGGACCTCACTTTGGAACTGGGCATGAAGATCTTTGCACC +
Preference number: 1 (lower is better)
Translates to: MYSECGFLCLTRKQL*EGPHFGTGHEDLCT
Trigger: GGTGCAAAGATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTGAGGCAGAGAAAGCCACACTCTGAATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGGACCACGGCTTGACTaGCCCCCGCCCAGGGCTCGA +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPGPRLD*PPPRAR
Trigger: TCGAGCCCTGGGCGGGGGTCAGTCAAGCCGTGGTCC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCAGGAGAAGGCCGGTaGTGGGGCACTGGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPGEGR*WGTGAA
Trigger: GGCTGCTCCAGTGCCCCATCACCGGCCTTCTCCTGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCAGGGTGCAGAGGGCTaGAGGCCCCCTCCACTATCC +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLQGAEG*RPPPLS
Trigger: GGATAGTGGAGGGGGCCTTCAGCCCTCTGCACCCTG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp CCTGGGCAGATCACAAGGACGTCTGACCCCTCCCTGGAGAGCACTTaGCCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PGQITRTSDPSLEST*PASQGRATPSPCLG
Trigger: CCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGATCTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCAGACTGGCTGGCCTaGTCTGTCCCCAGCGTGTTC +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPDWLA*SVPSVF
Trigger: GAACACGCTGGGGACAGAGCAGGCCAGCCAGTCTGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAAACAGACCCACAGGCTaGCCAGCCAGCCAGACGCTG +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPNRPTG*PASQTL
Trigger: CAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGGACTCACGAGGGGGTaGGAGCGGCTGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPGLTRG*ERLLMA
Trigger: AGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAAGTGACCATCAGCTGTaGGCAGTGGCTAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPSDHQL*AVARPG
Trigger: CCCAGGCCTAGCCACTGCCCACAGCTGATGGTCACT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGATGAGGAGGCCCCATaGCCTGCCCACTGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLDEEAP*PAHCFQ
Trigger: TTGGAAACAGTGGGCAGGTCATGGGGCCTCCTCATC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCT +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPRRKGR*YLGHKP
Trigger: AGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAACGGCATACTGTGCCTaGGCAGCTGCTGTGGACAGA +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPTAYCA*AAAVDR
Trigger: TCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCACGGCATACTGTGCCTaGGCAGCTGCTGTGGACAGA +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLTAYCA*AAAVDR
Trigger: TCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGT...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACTGTGCCTGAGCAGCTaGTGTGGACAGAGCGTACCT +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPLCLSS*CGQSVP
Trigger: AGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp TGGGCCACAAGCCTGGGTCAACACTCCAGCCATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACTGACCCCCGCCCAGGGCTCGAATCC +
Preference number: 2 (lower is better)
Translates to: WATSLGQHSSHLQRS*LDHGLTDPRPGLES
Trigger: GGATTCGAGCCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCTCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLSSLTS*NVSIPE
Trigger: CTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGA...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAAAGGGGTGTCCTCACTaGCCTCGTGAAACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPKGCPH*PRETCP
Trigger: TGGACACGTTTCACGAGGTCAGTGAGGACACCCCTT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCATCGGCCAATCCCAGCTaGCACACAGTGGTAAGAAGC +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPSANPS*HTVVRS
Trigger: GCTTCTTACCACTGTGTGTCAGCTGGGATTGGCCGA...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGG +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPVSEHI*SQQTHR
Trigger: CCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGAC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCTGTCTCAGAATCAGCTaGGTTGCAAGCCCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLCLRIS*VASPAR
Trigger: CCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACA...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPVVTGS*MPSAGT
Trigger: TGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTAC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAA +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLREGDT*ATSLGQ
Trigger: TTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCT...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCAGGCACAAACGTCAGTaGGCACATCTGCTCCCAACA +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLRHKRQ*AHLLPT
Trigger: TGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCT...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGAAAATCTCCTTCCGTaGCACCCTGGGCAGATCACA +
Preference number: 2 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPENLLP*HPGQIT
Trigger: TGTGATCTGCCCAGGGTGTCACGGAAGGAGATTTTC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGCACACACTCTGTCCTaGGCCCTTGTATTTACAGGC +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLAHTLS*ALVFTG
Trigger: GCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp TGTTCAGGGTGCTGCAAGGACTGGGATCGCCAGTGCCTCAGATGTTaGTACCCGGAGGCTGCACCATGGCGAATCCTGCACCTGCCTCGG +
Preference number: 2 (lower is better)
Translates to: CSGCCKDWDRQCLRC*YPEAAPWRILHLPR
Trigger: CCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCCTGAAGGCGGGGTGTaGGGCAGGCAGGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLPEGGV*GRQGAE
Trigger: CTCTGCACCCTGCCTGCCTCACACCCCGCCTTCAGG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCTTTAAGGCATCCCTCTaGAGGGGCCTGTCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLFKASL*RGLSQN
Trigger: ATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAA...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCACGGTGGACGGTGAGTaGACCAAAGGACTTTGGAAT +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLTVDGE*TKGLWN
Trigger: ATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGT...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCAGCCAGCCAGACGCTaGGCTCCACCAGACTGGCTG +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLQPARR*APPDWL
Trigger: CAGCCAGTCTGGTGGAGCTCAGCGTCTGGCTGGCTG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCAGGGTGCAGAGGGCTaGAGGCCCCCTCCACTATCC +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLQGAEG*RPPPLS
Trigger: GGATAGTGGAGGGGGCCTTCAGCCCTCTGCACCCTG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGTAGGAGAGGGCTCCTaGAGGCGGGGTGTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLVGEGS*RRGVRQ
Trigger: CTGCCTCACACCCCGCCTTCAGGAGCCCTCTCCTAC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGTCGGAGGTCGGACGGTaGAGTGCTACGCTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQSEVGR*SATLSQ
Trigger: CTGGCTGAGCGTAGCACTGCACCGTCCGACCTCCGA...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCATGTGACCCCGGCCCCTaGCTCGGAGGTCGGACGGTG +
Preference number: 2 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPCDPGP*LGGRTV
Trigger: CACCGTCCGACCTCCGAGGCAGGGGCCGGGGTCACA...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAAGGGTCCGCCTTGTGTaGCCGCCTCAGTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIRVRLV*PPQWRQ
Trigger: CTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCT...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGAACAGACCCACAGGCTaGCCAGCCAGCCAGACGCTG +
Preference number: 2 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQNRPTG*PASQTL
Trigger: CAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTT...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCATCCCTCTCCCTGCCTTaGGGAACGGTGGACGGTGAG +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEASLSLP*GTVDGE
Trigger: CTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGA...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp TCTGCATGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTaGTGTGCCCGCCTCAGTGGAGGCAGCGTTCCAAGGCCCACCACC +
Preference number: 2 (lower is better)
Translates to: SACLKKMEAVSGGSA*CARLSGGSVPRPTT
Trigger: GGTGGTGGGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACATGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCACTCGGAACTGGATGTaGCACCAGGAATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLTRNWM*HQEFLT
Trigger: TGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGT...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACTGCTCCTCCTCTCCTaGCAGGAGAAGGCCGGTGAT +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEALLLLS*QEKAGD
Trigger: ATCACCGGCCTTCTCCTGGCAGGAGAGGAGGAGCAG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCTCCACCAGACTGGCTaGCCTGCTCTGTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTLHQTG*PALSPA
Trigger: CGCTGGGGACAGAGCAGGCCAGCCAGTCTGGTGGAG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGGGCAAACTCGGAACTaGATGTGCCACCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPGQTRN*MCHQEF
Trigger: AAATTCCTGGTGGCACATCCAGTTCCGAGTTTGCCC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAATCCCCAAGGTGGAGTaGTCCTCCAGCCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIIPKVE*SSSQGQ
Trigger: CTGTCCCTGGCTGGAGGAGCACTCCACCTTGGGGAT...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCAGGGCTGGCATCTCTaGTTCCAGTGCTCCCTAGCG +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLQGWHL*FQCSLA
Trigger: CGCTAGGGAGCACTGGAAGCAGAGATGCCAGCCCTG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEVLHAF*WDTEKR
Trigger: CCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGAC...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACTGCTCCTCCTCTCCTaGCAGGAGAAGGCCGGTGAT +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQILLLLS*QEKAGD
Trigger: ATCACCGGCCTTCTCCTGGCAGGAGAGGAGGAGCAG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTGGGTCCCGAGGGAGTaGCGGGACCCTGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSWVPRE*RDPVQS
Trigger: GGACTGCACAGGGTCCCGGCACTCCCTCGGGACCCA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGGACTCACGAGGGGGTaGGAGCGGCTGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSGLTRG*ERLLMA
Trigger: AGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCCACTATCCCCAAGGTaGAGTGCTCCTCCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLPLSPR*SAPPAR
Trigger: CCTGGCTGGAGGAGCACTCCACCTTGGGGATAGTGG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAACGCTCAGCCAGGGCTaGCATCTCTGCTTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQITLSQG*HLCFQC
Trigger: GCACTGGAAGCAGAGATGCCAGCCCTGGCTGAGCGT...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCAGCTGGGTGTGGCCTaGAGCCTCCAGGCAGGACAA +
Preference number: 2 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTQLGVA*SLQAGQ
Trigger: TTGTCCTGCCTGGAGGCTCCAGGCCACACCCAGCTG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACCGGTGATGGGGCACTaGAGCAGCCCCACCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEPVMGH*SSPTSW
Trigger: CCAGCTGGTGGGGCTGCTCCAGTGCCCCATCACCGG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCCGGTGATGGGGCACTaGAGCAGCCCCACCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSPVMGH*SSPTSW
Trigger: CCAGCTGGTGGGGCTGCTCCAGTGCCCCATCACCGG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCA +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAAPASV*GLGIKS
Trigger: TGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGC...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACAGCCAGCCAGACGCTaGGCTCCACCAGACTGGCTG +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEQPARR*APPDWL
Trigger: CAGCCAGTCTGGTGGAGCTCAGCGTCTGGCTGGCTG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACCTGAAGGCGGGGTGTaGGGCAGGCAGGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSPEGGV*GRQGAE
Trigger: CTCTGCACCCTGCCTGCCTCACACCCCGCCTTCAGG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCT +
Preference number: 2 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLRRKGR*YLGHKP
Trigger: AGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCT...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGGTCGGACGGTGCAGTaGTACGCTCAGCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSGRTVQ*YAQPGL
Trigger: CAGCCCTGGCTGAGCGTAGCACTGCACCGTCCGACC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCATCGGAGGTCGGACGGTaGAGTGCTACGCTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPSEVGR*SATLSQ
Trigger: CTGGCTGAGCGTAGCACTGCACCGTCCGACCTCCGA...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAVVTGS*MPSAGT
Trigger: TGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTAC...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCC +
Preference number: 2 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLLCEAW*AATCTA
Trigger: GGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCC +
Preference number: 2 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSELCEAW*AATCTA
Trigger: GGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCTGCATGCCTTCTGCTaGGACACGGAGAAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLLHAFC*DTEKRS
Trigger: ACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCTGCCTTGGGGAACGGTaGACGGTGAGTGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLCLGER*TVSAPK
Trigger: CTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCA...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGAAGGGGTGTCCTCACTaGCCTCGTGAAACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEKGCPH*PRETCP
Trigger: TGGACACGTTTCACGAGGTCAGTGAGGACACCCCTT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGTAGGAGAGGGCTCCTaGAGGCGGGGTGTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSVGEGS*RRGVRQ
Trigger: CTGCCTCACACCCCGCCTTCAGGAGCCCTCTCCTAC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCAGCCAGCCAAAACAGTaGCCATCAGCTGTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLSQPKQ*PSAVGS
Trigger: ACTGCCCACAGCTGATGGTCACTGTTTTGGCTGGCT...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCCAGACTGGCTGGCCTaGTCTGTCCCCAGCGTGTTC +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSPDWLA*SVPSVF
Trigger: GAACACGCTGGGGACAGAGCAGGCCAGCCAGTCTGG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGG +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLVSEHI*SQQTHR
Trigger: CCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGAC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAATCCCCAAGGTGGAGTaGTCCTCCAGCCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPIPKVE*SSSQGQ
Trigger: CTGTCCCTGGCTGGAGGAGCACTCCACCTTGGGGAT...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACAGGGCTGGCATCTCTaGTTCCAGTGCTCCCTAGCG +
Preference number: 2 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPQGWHL*FQCSLA
Trigger: CGCTAGGGAGCACTGGAAGCAGAGATGCCAGCCCTG...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSVLHAF*WDTEKR
Trigger: CCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGAC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAGCGGAGGAAATAGAATaGGCGCTCTCCGACAGCATT +
Preference number: 2 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAAEEIE*ALSDSI
Trigger: AATGCTGTCGGAGAGCGCGCATTCTATTTCCTCCGC...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGCCACTCCCTCTCCCTaGCTTGGGGAACGGTGGACG +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSATPSP*LGERWT
Trigger: CGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAGACCCCTGTGAACCGTaGCTGAGATTCATGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEADPCEP*LRFMGF
Trigger: GAAACCCATGAATCTCAGGCACGGTTCACAGGGGTC...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGTCTCTGTGAAGCATaGTGCGCTGCCACATGCACA +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGLCEA*CAATCT
Trigger: TGTGCATGTGGCAGCGCACCATGCTTCACAGAGACC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGCTAGGCCTGGGTCCTaGGTTTGTGCTGCACCCCAT +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSARPGS*VCAAPH
Trigger: ATGGGGTGCAGCACAAACCCAGGACCCAGGCCTAGC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTAGTGACCATCAGCTGTaGGCAGTGGCTAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSSDHQL*AVARPG
Trigger: CCCAGGCCTAGCCACTGCCCACAGCTGATGGTCACT...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp TCCGCGCCACTCCTGAAAAGGTCCAAGTCACAATGTTCCGGTCTCTaGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGC +
Preference number: 2 (lower is better)
Translates to: SAPLLKRSKSQCSGL*LQNGLCEAWCAATC
Trigger: GCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTGTGACTTGGACCTTTTCAGGAGTGGCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGATGAGGAGGCCCCATaGCCTGCCCACTGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPDEEAP*PAHCFQ
Trigger: TTGGAAACAGTGGGCAGGTCATGGGGCCTCCTCATC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCATCCGCGCCACTCCTaGAAAGGTCCAAGTCACAAT +
Preference number: 2 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEHPRHS*KGPSHN
Trigger: ATTGTGACTTGGACCTTTTCAGGAGTGGCGCGGATG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCAGAATCAGCTGCGTTaGAAGCCCAGCCAGGCTCGT +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSQNQLR*KPSQAR
Trigger: ACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATGTGACCCCGGCCCCTaGCTCGGAGGTCGGACGGTG +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKCDPGP*LGGRTV
Trigger: CACCGTCCGACCTCCGAGGCAGGGGCCGGGGTCACA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGAGGCCCCATGACCTaGCCACTGTTTCCAACAAAA +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGGPMT*PLFPTK
Trigger: TTTTGTTGGAAACAGTGGGCAGGTCATGGGGCCTCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACCGCAACTTTCTATCTaGCATTCCCTGCGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAPQLSI*HSLRRK
Trigger: TTTCCTCCGCAGGGAATGCCAGATAGAAAGTTGCGG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGGAAACGGAGAGGCTaGAGGTTTGCTAAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGKRRG*RFAKSE
Trigger: CTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACCTGGGCCACAAGCCTaGGTCAACACTCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEPGPQA*VNTPAI
Trigger: GATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATCCCTCTCCCTGCCTTaGGGAACGGTGGACGGTGAG +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSSLSLP*GTVDGE
Trigger: CTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCGTCTGACCCCTCCCTaGAGAGCACTTTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSRLTPP*RALCQP
Trigger: AGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCCTTCCGTGACACCCTaGGCAGATCACAAGGACGTC +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSPSVTP*ADHKDV
Trigger: GACGTCCTTGTGATCTGCCCAGGGTGTCACGGAAGG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACTCGAGTGTCGTGGGTaGGGGTGCAGCAGGATGCAG +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSLECRG*GCSRMQ
Trigger: CTGCATCCTGCTGCACCCCCACCCACGACACTCGAG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTACAGAATGGTCTCTGTaGAGCATGGTGCGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSTEWSL*SMVRCH
Trigger: GTGGCAGCGCACCATGCTTCACAGAGACCATTCTGT...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACTTTGGAACTGGGCATaGAGATCTTTGCACCACAAG +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEALWNWA*RSLHHK
Trigger: CTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGGGAACGGTGGACGGTaGGTGCACCAAAGGACTTTG +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSGNGGR*VHQRTL
Trigger: CAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAGAACCACTTTGGGAATaGAGACACGCTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAEPLWE*RHALMP
Trigger: TGGCATAAGAGCGTGTCTTCATTCCCAAAGTGGTTC...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCTTTAAGGCATCCCTCTaGAGGGGCCTGTCTCAGAAT +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLFKASL*RGLSQN
Trigger: ATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAA...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGCAGCCCCACCAGCTaGGTGTGGCCTGGAGCCTCC +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKSSPTS*VWPGAS
Trigger: GGAGGCTCCAGGCCACACCCAGCTGGTGGGGCTGCT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCA +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSAPASV*GLGIKS
Trigger: TGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 90 bp GCTTTCTCTGCCTCACACGAAAACAACTTTGGGAGGGACCTCACTTaGGAACTGGGCATGAAGATCTTTGCACCACAAGCACCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AFSASHENNFGRDLT*ELGMKIFAPQAPRA
Trigger: AGCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTGAGGCAGAGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGTCGGACGGTGCAGTaGTACGCTCAGCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGRTVQ*YAQPGL
Trigger: CAGCCCTGGCTGAGCGTAGCACTGCACCGTCCGACC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGGGCATGAAGATCTTTaGACCACAAGCACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSGHEDL*TTSTQG
Trigger: GCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTTTGTACCCGGAGGCTaGACCATGGCGAATCCTGCA +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSFVPGG*TMANPA
Trigger: TGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGACTGGGATCGCCAGTaGCTCAGATGTTTGTACCCG +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSDWDRQ*LRCLYP
Trigger: CGGGTACAAACATCTGAGGCACTGGCGATCCCAGTC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGGTCTCTGTGAAGCATaGTGCGCTGCCACATGCACA +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSGLCEA*CAATCT
Trigger: TGTGCATGTGGCAGCGCACCATGCTTCACAGAGACC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCCGCAACTTTCTATCTaGCATTCCCTGCGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTPQLSI*HSLRRK
Trigger: TTTCCTCCGCAGGGAATGCCAGATAGAAAGTTGCGG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAAATGTATTCAGAGTGTaGCTTTCTCTGCCTCACACG +
Preference number: 2 (lower is better)
Translates to: LLDTPGGETEHLRSSPEANVFRV*LSLPHT
Trigger: CGTGTGAGGCAGAGAAAGCCACACTCTGAATACATT...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGAGGATTTCTCTCCTaGTGCCCTACCCCCATTTCC +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGGFLS*CPTPIS
Trigger: GGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAAGGCACAAACGTCAGTaGGCACATCTGCTCCCAACA +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTERHKRQ*AHLLPT
Trigger: TGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCT...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAATAGCATGGCAGGGCTaGGTAGAAGCAGGATGGCCA +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSIAWQG*VEAGWP
Trigger: TGGCCATCCTGCTTCTACTCAGCCCTGCCATGCTAT...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCAGTTTAAGCCGCAGATaGTTCAGGAGGGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSSLSRR*FRRVWP
Trigger: TGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACT...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCCAGGGCCGTTCCTTTaGATCAAAATAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: CLKKMEAVSGGSALCARLPGPFL*IKIGTH
Trigger: ATGAGTACCTATTTTGATGCAAAGGAACGGCCCTGG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATTTGTACCCGGAGGCTaGACCATGGCGAATCCTGCA +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSFVPGG*TMANPA
Trigger: TGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTTTGCTAAGTCTGAGTTaGGGACATGGTGGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSLLSLS*GHGGSE
Trigger: CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAA...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAA +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSREGDT*ATSLGQ
Trigger: TTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCT...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGVQQR*ISTLWV
Trigger: CACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACAACCAGAGTGGAGGTaGCCCTCTCCCTGCCAGTTC +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKQPEWR*PSPCQF
Trigger: GAACTGGCAGGGAGAGGGTCACCTCCACTCTGGTTG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCTTTGGAACTGGGCATaGAGATCTTTGCACCACAAG +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSLWNWA*RSLHHK
Trigger: CTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCAATGTTCCGGTCTCTTaGTACAGAATGGTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTNVPVS*YRMVSV
Trigger: CACAGAGACCATTCTGTAGCAAGAGACCGGAACATT...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATCATGGGTTTCTCCCTaGCCTTCAAGCGAGATGAGT +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESWVSP*PSSEMS
Trigger: ACTCATCTCGCTTGAAGGGCAGGGAGAAACCCATGA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAACGCTCAGCCAGGGCTaGCATCTCTGCTTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKTLSQG*HLCFQC
Trigger: GCACTGGAAGCAGAGATGCCAGCCCTGGCTGAGCGT...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCAGAATCAGCTGCGTTaGAAGCCCAGCCAGGCTCGT +
Preference number: 2 (lower is better)
Translates to: NSELDVPPGISNIFLEDQQNQLR*KPSQAR
Trigger: ACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACTGCATGCCTTCTGCTaGGACACGGAGAAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKLHAFC*DTEKRS
Trigger: ACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGGGCAAACTCGGAACTaGATGTGCCACCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSGQTRN*MCHQEF
Trigger: AAATTCCTGGTGGCACATCCAGTTCCGAGTTTGCCC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGTATCAGTAGTAAGGTaGACTATGCATCCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIVSVVR*TMHPSS
Trigger: AGAACTTGGATGCATAGTCCACCTTACTACTGATAC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGTCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAG +
Preference number: 2 (lower is better)
Translates to: NSELDVPPGISNIFLEDQSSLTS*NVSIPE
Trigger: CTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGA...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTTGGGTGTATCTATTGTaGAATTTGGTGGGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSWVYLL*NLVGGV
Trigger: AACACCACCCACCAAATTGCACAATAGATACACCCA...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCACACGAAAACAACTTTaGGAGGGACCTCACTTTGGA +
Preference number: 2 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSTRKQL*EGPHFG
Trigger: TCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGT...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACACTTCATGATGAAATaGAAACCTGCCCTTGAGGAC +
Preference number: 2 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEHFMMK*KPALED
Trigger: GTCCTCAAGGGCAGGTTTCCATTTCATCATGAAGTG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGAGGCCCCATGACCTaGCCACTGTTTCCAACAAAA +
Preference number: 2 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGGPMT*PLFPTK
Trigger: TTTTGTTGGAAACAGTGGGCAGGTCATGGGGCCTCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKGVQQR*ISTLWV
Trigger: CACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGAAACGTGTCCATCCCTaGGAAAGGGGGTTCAACAAC +
Preference number: 2 (lower is better)
Translates to: NSELDVPPGISNIFLEDQKRVHP*ERGFNN
Trigger: GTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTT...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGAGTGTGGCTTTCTCTaGCTCACACGAAAACAACTT +
Preference number: 2 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKECGFL*LTRKQL
Trigger: AAGTTGTTTTCGTGTGAGGCAGAGAAAGCCACACTC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCATTGCTGGACCACGGCTaGACTGACCCCCGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPLLDHG*TDPRPG
Trigger: CCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAA...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp CCAACAGACCCACAGGCTGGCCAGCCAGCCAGACGCTaGGCTCCACCAGACTGGCTGGCCTGCTCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: PTDPQAGQPARR*APPDWLACSVP
Trigger: GGGGACAGAGCAGGCCAGCCAGTCTGGTGGAGCTCAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp CTTCCAGTGCTCCCTAGCGCCGTAGGAGAGGGCTCCTaGAGGCGGGGTGTGAGGCAGGCAGGGTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: LPVLPSAVGEGS*RRGVRQAGCRG
Trigger: CCCTCTGCACCCTGCCTGCCTCACACCCCGCCTTCAGGAGCCCTCTCCTACGGCGCTAGGGAGCACTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp TTGCCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCTaGCTTGGGGAACGGTGGACGGTGAGTGCACCAAAG +
Preference number: 3 (lower is better)
Translates to: LPASQGRATPSP*LGERWTVSAPK
Trigger: CTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp CCAGCCATCTGCAGAGGAGTTTGCTGGACCACGGCTTaGCTGACCCCCGCCCAGGGCTCGAATCCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: PAICRGVCWTTA*LTPAQGSNPSP
Trigger: TGGGCTGGGATTCGAGCCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp TCACAAGGACGTCTGACCCCTCCCTGGAGAGCACTTTaGCAGCCTCCCAGGGACGGGCCACTCCCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: SQGRLTPPWRAL*QPPRDGPLPLP
Trigger: AGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp AGCCTCCCAGGGACGGGCCACTCCCTCTCCCTGCCTTaGGGAACGGTGGACGGTGAGTGCACCAAAGGACTT +
Preference number: 3 (lower is better)
Translates to: SLPGTGHSLSLP*GTVDGECTKGL
Trigger: AAGTCCTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCCCTGGGAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp ACCCTGGGCAGATCACAAGGACGTCTGACCCCTCCCTaGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCA +
Preference number: 3 (lower is better)
Translates to: TLGRSQGRLTPP*RALCQPPRDGP
Trigger: TGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGATCTGCCCAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GGGTCTGGCCAGGAGTACCCAGGAGGATTTCTCTCCTaGTGCCCTACCCCCATTTCCCAGTCCAGGCCGGGG +
Preference number: 3 (lower is better)
Translates to: GSGQEYPGGFLS*CPTPISQSRPG
Trigger: CCCCGGCCTGGACTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCCTGGGTACTCCTGGCCAGACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp TCCCTCTGCAGGGGCCTGTCTCAGAATCAGCTGCGTTaGAAGCCCAGCCAGGCTCGTTGGGCAGAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: SLCRGLSQNQLR*KPSQARWAEAR
Trigger: TCTGGCCTCTGCCCAACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp AGGCATCCCTCTGCAGGGGCCTGTCTCAGAATCAGCTaGGTTGCAAGCCCAGCCAGGCTCGTTGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RHPSAGACLRIS*VASPARLVGQR
Trigger: CCTCTGCCCAACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp TCTGGCCAGGAGTACCCAGGAGGATTTCTCTCCTGGTaGCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCT +
Preference number: 3 (lower is better)
Translates to: SGQEYPGGFLSW*PTPISQSRPGP
Trigger: AGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCCTGGGTACTCCTGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp TGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCAGTaGAGGCAGCGTTCCAAGGCCCACCACCCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: CFRRVRLVCPPQ*RQRSKAHHPLP
Trigger: TGGAAGAGGGTGGTGGGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp CAGTGCCTCAGATGTTTGTACCCGGAGGCTGCACCATaGCGAATCCTGCACCTGCCTCGGTGTGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QCLRCLYPEAAP*RILHLPRCGAW
Trigger: CCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGGAGAGGCTGGAGGTTaGCTAAGTCTGAGTTGGGGA +
Preference number: 3 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPGEAGG*LSLSWG
Trigger: TCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp AAGCGGGCACCTGACGGCATACTGTGCCTGAGCAGCTaGTGTGGACAGAGCGTACCTGTCCACTCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: KRAPDGILCLSS*CGQSVPVHSGA
Trigger: GGCTCCAGAGTGGACAGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGGTGCCCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTaGCCGCCTCAGTGGAGGCAGCGTTCCAAGGCCCAC +
Preference number: 3 (lower is better)
Translates to: ENGGCFRRVRLV*PPQWRQRSKAH
Trigger: GTGGGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCCAGGGCCGTTCCTTaGCATCAAAATAGGTACTCA +
Preference number: 3 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPRAVP*HQNRYS
Trigger: TGAGTACCTATTTTGATGCAAAGGAACGGCCCTGGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp ATCTGCCCTGGAGGCACAAACGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGGCTGGCCAGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: ICPGGTNVSEHI*SQQTHRLASQP
Trigger: TGGCTGGCTGGCCAGCCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCTCCAGGGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp TGTACCCGGAGGCTGCACCATGGCGAATCCTGCACCTaGCTCGGTGTGGGGCCTGGGAATAAAGTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: CTRRLHHGESCT*LGVGPGNKVRV
Trigger: AACCCTGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GGCTGCACCATGGCGAATCCTGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCAGGGTTAGGAGTGAGG +
Preference number: 3 (lower is better)
Translates to: GCTMANPAPASV*GLGIKSGLGVR
Trigger: CCTCACTCCTAACCCTGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp GTGGTAAGAAGCGGGCACCTGACGGCATACTGTGCCTaGGCAGCTGCTGTGGACAGAGCGTACCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: VVRSGHLTAYCA*AAAVDRAYLST
Trigger: AGTGGACAGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGGTGCCCGCTTCTTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp TGCCCATCCCCACCTCTGAATCACCCCTCACTGGTCTaGGCTGTGTTCAGGGTGCTGCAAGGACTGGGATCG +
Preference number: 3 (lower is better)
Translates to: CPSPPLNHPSLV*AVFRVLQGLGS
Trigger: CGATCCCAGTCCTTGCAGCACCCTGAACACAGCTCAGACCAGTGAGGGGTGATTCAGAGGTGGGGATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp GTCTTCTGGACACACCGGGTGGGGAGACAGAACACTTaGGGTCAAGTCCTGAGGCAGAGTGGCCAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: VFWTHRVGRQNT*GQVLRQSGQPS
Trigger: AGAGGGCTGGCCACTCTGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GCTCCTCCAGCCAGGGACAGCTTTAAGGCATCCCTCTaGAGGGGCCTGTCTCAGAATCAGCTGCGTTGCAAG +
Preference number: 3 (lower is better)
Translates to: APPARDSFKASL*RGLSQNQLRCK
Trigger: CTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAAGCTGTCCCTGGCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CCCAGGTATAGTAGTGACAGGGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGGAGTCCTGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: PRYSSDRVLHAF*WDTEKRSPGRC
Trigger: ACACCTGCCAGGACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTACTATACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CCCATCAGAGGCCCAGGTATAGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACACGGAGAAGCGGAGTC +
Preference number: 3 (lower is better)
Translates to: PIRGPGIVVTGS*MPSAGTRRSGV
Trigger: GACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTACTATACCTGGGCCTCTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CACAGTGGTAAGAAGCGGGCACCTGACGGCATACTGTaGCTGAGCAGCTGCTGTGGACAGAGCGTACCTGTC +
Preference number: 3 (lower is better)
Translates to: HSGKKRAPDGIL*LSSCCGQSVPV
Trigger: GACAGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGGTGCCCGCTTCTTACCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GATGTTTGTACCCGGAGGCTGCACCATGGCGAATCCTaGACCTGCCTCGGTGTGGGGCCTGGGAATAAAGTC +
Preference number: 3 (lower is better)
Translates to: DVCTRRLHHGES*TCLGVGPGNKV
Trigger: GACTTTATTCCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CTGTGTTCAGGGTGCTGCAAGGACTGGGATCGCCAGTaGCTCAGATGTTTGTACCCGGAGGCTGCACCATGG +
Preference number: 3 (lower is better)
Translates to: LCSGCCKDWDRQ*LRCLYPEAAPW
Trigger: CCATGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp CGCGCACACACCCACACGCACGCACACACTCTGTCCTaGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RAHTHTHAHTLS*ALVFTGLNSQE
Trigger: CTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGTGGGTGTGTGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp CCGGGACCCTGTGCAGTCCATCTTAGCACCTGCTTCTaGCAAGAAAGAGGCTGGTCTTCTGGACACACCGGG +
Preference number: 3 (lower is better)
Translates to: PGPCAVHLSTCF*QERGWSSGHTG
Trigger: CCCGGTGTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGACTGCACAGGGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCTTGTGGGTGTATCTATaGTGCAATTTGGTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLLWVYL*CNLVGG
Trigger: ACCACCCACCAAATTGCACAATAGATACACCCACAA...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATATCAGAATCAGCTGCGTaGCAAGCCCAGCCAGGCTCG +
Preference number: 3 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQISESAA*QAQPGS
Trigger: CGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGA...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp CCCTGCCCTTCAAGCGAGATGAGTTTAAGCCGCAGATaGTTCAGGAGGGTCTGGCCAGGAGTACCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: PCPSSEMSLSRR*FRRVWPGVPRR
Trigger: CCTCCTGGGTACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAAGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GGAGTGCCGGGACCCTGTGCAGTCCATCTTAGCACCTaGTTCTGGCAAGAAAGAGGCTGGTCTTCTGGACAC +
Preference number: 3 (lower is better)
Translates to: GVPGPCAVHLST*FWQERGWSSGH
Trigger: GTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGACTGCACAGGGTCCCGGCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp CAGGAGGAAGGGAAGGTGATACCTGGGCCACAAGCCTaGGTCAACACTCCAGCCATCTGCAGAGGAGTTTGC +
Preference number: 3 (lower is better)
Translates to: QEEGKVIPGPQA*VNTPAICRGVC
Trigger: GCAAACTCCTCTGCAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp AGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAACACTCCAGCCATCTG +
Preference number: 3 (lower is better)
Translates to: RPQLSGGREGDT*ATSLGQHSSHL
Trigger: CAGATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GGACGGGCCACTCCCTCTCCCTGCCTTGGGGAACGGTaGACGGTGAGTGCACCAAAGGACTTTGGAATAAAA +
Preference number: 3 (lower is better)
Translates to: GRATPSPCLGER*TVSAPKDFGIK
Trigger: TTTTATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGCCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp CACTGGTCTGAGCTGTGTTCAGGGTGCTGCAAGGACTaGGATCGCCAGTGCCTCAGATGTTTGTACCCGGAG +
Preference number: 3 (lower is better)
Translates to: HWSELCSGCCKD*DRQCLRCLYPE
Trigger: CTCCGGGTACAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTCAGACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp GTAAGGCGGCAGGAAGGGGTGTCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAGAAAGGGGGTTCAACA +
Preference number: 3 (lower is better)
Translates to: VRRQEGVSSLTS*NVSIPEKGGST
Trigger: TGTTGAACCCCCTTTCTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGACACCCCTTCCTGCCGCCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCCGCTCACACAGACCCT +
Preference number: 3 (lower is better)
Translates to: GLLLQNGLCEAW*AATCTAAHTDP
Trigger: AGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CTGGGAATAAAGTCAGGGTTAGGAGTGAGGCGATCTTaGACTCGAGTGTCGTGGGTGGGGGTGCAGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LGIKSGLGVRRS*TRVSWVGVQQD
Trigger: ATCCTGCTGCACCCCCACCCACGACACTCGAGTGCAAGATCGCCTCACTCCTAACCCTGACTTTATTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp ATCACCCCTCACTGGTCTGAGCTGTGTTCAGGGTGCTaGAAGGACTGGGATCGCCAGTGCCTCAGATGTTTG +
Preference number: 3 (lower is better)
Translates to: ITPHWSELCSGC*KDWDRQCLRCL
Trigger: CAAACATCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTCAGACCAGTGAGGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp TCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATaGTGCGCTGCCACATGCACAGCCGCTCACACAGAC +
Preference number: 3 (lower is better)
Translates to: SGLLLQNGLCEA*CAATCTAAHTD
Trigger: GTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GCCACACTATTGCTCAGATCACATCTTCCTGTTGGGTaGCACCCCTGCCCAGCTGAGATCCTGAATGGGTCC +
Preference number: 3 (lower is better)
Translates to: ATLLLRSHLPVG*HPCPAEILNGS
Trigger: GGACCCATTCAGGATCTCAGCTGGGCAGGGGTGCCACCCAACAGGAAGATGTGATCTGAGCAATAGTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACTCTGTCCTGGGCCCTaGTATTTACAGGCCTCAACT +
Preference number: 3 (lower is better)
Translates to: LLDTPGGETEHLRSSPEALCPGP*YLQAST
Trigger: AGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GGAAACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTaGGGACATGGTGGGTCTGAGAAAAGTGTTGCCCGC +
Preference number: 3 (lower is better)
Translates to: GNGEAGGLLSLS*GHGGSEKSVAR
Trigger: GCGGGCAACACTTTTCTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GTCCATCTTAGCACCTGCTTCTGGCAAGAAAGAGGCTaGTCTTCTGGACACACCGGGTGGGGAGACAGAACA +
Preference number: 3 (lower is better)
Translates to: VHLSTCFWQERG*SSGHTGWGDRT
Trigger: TGTTCTGTCTCCCCACCCGGTGTGTCCAGAAGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACT +
Preference number: 3 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTHLQRS*LDHGLT
Trigger: AGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACACACGAAAACAACTTaGGGAGGGACCTCACTTTGG +
Preference number: 3 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAHTKTT*GGTSLW
Trigger: CCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp ACAATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTaGAGCATGGTGCGCTGCCACATGCACAGCCGCTCA +
Preference number: 3 (lower is better)
Translates to: TMFRSLATEWSL*SMVRCHMHSRS
Trigger: TGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp TATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCTGGGTCAACACTCCAG +
Preference number: 3 (lower is better)
Translates to: YLQASTLRRKGR*YLGHKPGSTLQ
Trigger: CTGGAGTGTTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CCCTACCAAATATTCCACTCTCTCTCCCAGACCCAATaGAAGCAGGGAGGTCAGAGAGCCCCAACACAGCAT +
Preference number: 3 (lower is better)
Translates to: PYQIFHSLSQTQ*KQGGQRAPTQH
Trigger: ATGCTGTGTTGGGGCTCTCTGACCTCCCTGCTTGCATTGGGTCTGGGAGAGAGAGTGGAATATTTGGTAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp GAGGGACCTCACTTTGGAACTGGGCATGAAGATCTTTaGACCACAAGCACCCAGGGCTCTCTTCTGTCAAGG +
Preference number: 3 (lower is better)
Translates to: EGPHFGTGHEDL*TTSTQGSLLSR
Trigger: CCTTGACAGAAGAGAGCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACAATGTTCCGGTCTCTaGCTACAGAATGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAQCSGL*LQNGLC
Trigger: ACAGAGACCATTCTGTAGCAAGAGACCGGAACATTG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGGAGGGACCTCACTTaGGAACTGGGCATGAAGATC +
Preference number: 3 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGRDLT*ELGMKI
Trigger: GATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACT +
Preference number: 3 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSHLQRS*LDHGLT
Trigger: AGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp GGTGTCCTCACTGACCTCGTGAAACGTGTCCATCCCTaGGAAAGGGGGTTCAACAACGCTGAATCTCAACTT +
Preference number: 3 (lower is better)
Translates to: GVLTDLVKRVHP*ERGFNNAESQL
Trigger: AAGTTGAGATTCAGCGTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp ACTTTCTATCTGGCATTCCCTGCGGAGGAAATAGAATaGGCGCTCTCCGACAGCATTTCCTGTAACATCCGC +
Preference number: 3 (lower is better)
Translates to: TFYLAFPAEEIE*ALSDSISCNIR
Trigger: GCGGATGTTACAGGAAATGCTGTCGGAGAGCGCGCATTCTATTTCCTCCGCAGGGAATGCCAGATAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATCAGAATCAGCTGCGTaGCAAGCCCAGCCAGGCTCG +
Preference number: 3 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKSESAA*QAQPGS
Trigger: CGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp CCGCACCCTGCCATTAAACGAGAACCACTTTGGGAATaGAGACACGCTCTTATGCCAAAAATAGCCAACGCC +
Preference number: 3 (lower is better)
Translates to: PHPAIKREPLWE*RHALMPKIANA
Trigger: GGCGTTGGCTATTTTTGGCATAAGAGCGTGTCTTCATTCCCAAAGTGGTTCTCGTTTAATGGCAGGGTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp GAGTGTGGCTTTCTCTGCCTCACACGAAAACAACTTTaGGAGGGACCTCACTTTGGAACTGGGCATGAAGAT +
Preference number: 3 (lower is better)
Translates to: ECGFLCLTRKQL*EGPHFGTGHED
Trigger: ATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTGAGGCAGAGAAAGCCACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTTGTGGGTGTATCTATaGTGCAATTTGGTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSLWVYL*CNLVGG
Trigger: ACCACCCACCAAATTGCACAATAGATACACCCACAA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGAGAGGCTGGAGGTTaGCTAAGTCTGAGTTGGGGA +
Preference number: 3 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGEAGG*LSLSWG
Trigger: TCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR-3UTR CAA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACCCAGGGCCGTTCCTTaGCATCAAAATAGGTACTCA +
Preference number: 3 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKPRAVP*HQNRYS
Trigger: TGAGTACCTATTTTGATGCAAAGGAACGGCCCTGGG...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp ACGTGTCCATCCCTGAGAAAGGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTGTATCTATTGTGCAAT +
Preference number: 3 (lower is better)
Translates to: TCPSLRKGVQQR*ISTLWVYLLCN
Trigger: ATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCCTTTCTCAGGGATGGACACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR GCA 72 bp CTGAGACATAAAATGTATTCAGAGTGTGGCTTTCTCTaGCTCACACGAAAACAACTTTGGGAGGGACCTCAC +
Preference number: 3 (lower is better)
Translates to: LRHKMYSECGFL*LTRKQLWEGPH
Trigger: GTGAGGTCCCTCCCAAAGTTGTTTTCGTGTGAGGCAGAGAAAGCCACACTCTGAATACATTTTATGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CCA 72 bp TGTATCAGTAGTAAGGTGGACTATGCATCCAAGTTCTaGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGC +
Preference number: 3 (lower is better)
Translates to: CISSKVDYASKF*YKGLRNVSQTS
Trigger: GCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCATAGTCCACCTTACTACTGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR TCA 72 bp GCAAGCATGGCCATAAACCACAAAAATGGAAGACCCTaGAATAGACGCAGTCTGGGAAAACATTCTGCATGT +
Preference number: 3 (lower is better)
Translates to: ASMAINHKNGRP*NRRSLGKHSAC
Trigger: ACATGCAGAATGTTTTCCCAGACTGCGTCTATTTCAGGGTCTTCCATTTTTGTGGTTTATGGCCATGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACCGGGCACCGAAGAGTaGGCGCATGGGGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPPGTEE*AHGARG
Trigger: CCCGCGCGCCCCATGCGCTCACTCTTCGGTGCCCGG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCCGGACCCTTTGTCTaGGGCCGGGCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGAGPFV*GRARRS
Trigger: GGAGCGGCGAGCCCGGCCTCAGACAAAGGGTCCGGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCCCCGCCGCGCCGCTaGAGCATTCCCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPPPRR*SIPGWK
Trigger: CTTCCACCCGGGAATGCTGCAGCGGCGCGGCGGGGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGAGCGGCTGTAGTCGCTaGGGGAGCCGGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGSGCSR*GSRSAS
Trigger: GCTCGCGGACCGGCTCCCTCAGCGACTACAGCCGCT...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCACATAGGCGGCGGCTaGCATGCTGCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGHIGGG*HAAGWG
Trigger: GCCCCAGCCCGCAGCATGGCAGCCGCCGCCTATGTG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCGGGCGCCGGCGCTTaGTGGTTGAGGTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGAGAGA*WLRSAR
Trigger: CCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCGCGCGGCTCGACATaGACACGAGGCACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPRGST*TRGTRR
Trigger: CCGCCGAGTGCCTCGTGTCCATGTCGAGCCGCGCGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGGGAGCGGCTGCTCATaGCTGTGGCGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGGSGCS*LWRAQG
Trigger: GCCCTGAGCCCGCCACAGCCATGAGCAGCCGCTCCC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCGGCGCTTGCTGGTTaGGGTCCGCTAGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPALAG*GPLGSA
Trigger: CGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCTGAAGGCGGGGTGTaGGGCAGGCAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPEGGV*GRQGAE
Trigger: CTCTGCACCCTGCCTGCCTCACACCCCGCCTTCAGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGGACCACGGCTTGACTaGCCCCCGCCCAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLGPRLD*PPPRAR
Trigger: TCGAGCCCTGGGCGGGGGTCAGTCAAGCCGTGGTCC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGCGGGCGCCGGCGCTTaGTGGTTGAGGTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPAGAGA*WLRSAR
Trigger: CCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCATGTGACCCCGGCCCCTaGCTCGGAGGTCGGACGGTG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPCDPGP*LGGRTV
Trigger: CACCGTCCGACCTCCGAGGCAGGGGCCGGGGTCACA...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGTGGGTCCCGAGGGAGTaGCGGGACCCTGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGWVPRE*RDPVQS
Trigger: GGACTGCACAGGGTCCCGGCACTCCCTCGGGACCCA...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACGAAGAGTGAGCGCATaGGGCGCGCGGGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPRRVSA*GARATG
Trigger: CCCAGTCGCCCGCGCGCCCCATGCGCTCACTCTTCG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACCGCGCGGCTCGACATaGACACGAGGCACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPPRGST*TRGTRR
Trigger: CCGCCGAGTGCCTCGTGTCCATGTCGAGCCGCGCGG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGGGTGGAAGTTGGCGTaGCGGCGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGGWKLA*RRACLV
Trigger: GACCAAGCACGCGCGCCGCCACGCCAACTTCCACCC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCTGAAGGCGGGGTGTaGGGCAGGCAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPEGGV*GRQGAE
Trigger: CTCTGCACCCTGCCTGCCTCACACCCCGCCTTCAGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCATGGGGCCGGCGGCGGTaGTCTTGCTGCGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPWGRRR*SCCESS
Trigger: TGACGACTCGCAGCAAGAGCACCGCCGCCGGCCCCA...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGGCGCCGGCGCTTGCTaGTTGAGGTCCGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGGAGAC*LRSARI
Trigger: GATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGTGCAGCATTCCCGGGTaGAAGTTGGCGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGCSIPG*KLAWRR
Trigger: GCGCCGCCACGCCAACTTCCACCCGGGAATGCTGCA...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGGACTCACGAGGGGGTaGGAGCGGCTGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGGLTRG*ERLLMA
Trigger: AGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCAGCCAGCCAGACGCTaGGCTCCACCAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLQPARR*APPDWL
Trigger: CAGCCAGTCTGGTGGAGCTCAGCGTCTGGCTGGCTG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCACTTGTGCTTCCTCTaGGGGGACTCGAGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGHLCFL*GDSRSA
Trigger: CGCCGACCTCGAGTCCCCGCAGAGGAAGCACAAGTG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGTGCAGTCCTGCCAGCTaGAGGCGAAGGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGCSPAS*RRRASH
Trigger: GTGAGAGGCCCTTCGCCTGCAGCTGGCAGGACTGCA...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCAGACTGGCTGGCCTaGTCTGTCCCCAGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPDWLA*SVPSVF
Trigger: GAACACGCTGGGGACAGAGCAGGCCAGCCAGTCTGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGCCACTCCCTCTCCCTaGCTTGGGGAACGGTGGACG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLATPSP*LGERWT
Trigger: CGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCCTGGAGAGCACTTTaGCAGCCTCCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPWRAL*QPPRDG
Trigger: CCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGGCGCCGGCGCTTGCTaGTTGAGGTCCGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLGAGAC*LRSARI
Trigger: GATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCGCAGATGGGGCAGCTaGACTTCTTCTCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGRRWGS*TSSRPC
Trigger: ACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGCG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCCCAGGAGAAGGCCGGTaGTGGGGCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPPGEGR*WGTGAA
Trigger: GGCTGCTCCAGTGCCCCATCACCGGCCTTCTCCTGG...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCCACTATCCCCAAGGTaGAGTGCTCCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGPLSPR*SAPPAR
Trigger: CCTGGCTGGAGGAGCACTCCACCTTGGGGATAGTGG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCGGAGGCTGCACCATaGCGAATCCTGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPEAAP*RILHLP
Trigger: AGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCATCTTCCTGTTGGGTaGCACCCCTGCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGHLPVG*HPCPAE
Trigger: CTCAGCTGGGCAGGGGTGCCACCCAACAGGAAGATG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACGCAGATGGGGCAGCTaGACTTCTTCTCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPRRWGS*TSSRPC
Trigger: ACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGCG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGTTCTTGTTGCAGTCCTaGCAGCTGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGFLLQS*QLQAKG
Trigger: GCCCTTCGCCTGCAGCTGGCAGGACTGCAACAAGAA...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCGCGAACTTCTTGTTaGAGTCCTGCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGARTSC*SPASCR
Trigger: CCTGCAGCTGGCAGGACTGCAACAAGAAGTTCGCGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCATGGTGCGCTGCCACATaGACAGCCGCTCACACAGAC +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPWCAAT*TAAHTD
Trigger: GTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGTTGGGTGGCACCCCTaGCCAGCTGAGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGVGWHP*PAEILN
Trigger: ATTCAGGATCTCAGCTGGGCAGGGGTGCCACCCAAC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACCACTATCCCCAAGGTaGAGTGCTCCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPPLSPR*SAPPAR
Trigger: CCTGGCTGGAGGAGCACTCCACCTTGGGGATAGTGG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCTGCATGCCTTCTGCTaGGACACGGAGAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGLHAFC*DTEKRS
Trigger: ACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGAPASV*GLGIKS
Trigger: TGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp TCCAGCCATCTGCAGAGGAGTTTGCTGGACCACGGCTaGACTGACCCCCGCCCAGGGCTCGAATCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSHLQRSLLDHG*TDPRPGLESQP
Trigger: GGGCTGGGATTCGAGCCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATGGCTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp ATCACAAGGACGTCTGACCCCTCCCTGGAGAGCACTTaGCCAGCCTCCCAGGGACGGGCCACTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ITRTSDPSLEST*PASQGRATPSP
Trigger: GGGAGAGGGAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACGTCCTTGTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGGGAACGGTGGACGGTaGGTGCACCAAAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPGNGGR*VHQRTL
Trigger: CAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCCTGACGGCATACTGTaGCTGAGCAGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLPDGIL*LSSCCG
Trigger: TCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCAACAGACCCACAGGCTaGCCAGCCAGCCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPNRPTG*PASQTL
Trigger: CAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTT...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp ATCCCTCTGCAGGGGCCTGTCTCAGAATCAGCTGCGTaGCAAGCCCAGCCAGGCTCGTTGGGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IPLQGPVSESAA*QAQPGSLGRGQ
Trigger: CTGGCCTCTGCCCAACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACAGGCCCCTGCAGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp AGCCTGGGTCAACACTCCAGCCATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACTGACCCCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLGQHSSHLQRS*LDHGLTDPRPG
Trigger: CCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATGGCTGGAGTGTTGACCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGAGCGGCTGTAGTCGCTaGGGGAGCCGGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQSGCSR*GSRSAS
Trigger: GCTCGCGGACCGGCTCCCTCAGCGACTACAGCCGCT...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAACAGAATGGTCTCTGTaGAGCATGGTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPTEWSL*SMVRCH
Trigger: GTGGCAGCGCACCATGCTTCACAGAGACCATTCTGT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCATCCGCGCCACTCCTaGAAAGGTCCAAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGHPRHS*KGPSHN
Trigger: ATTGTGACTTGGACCTTTTCAGGAGTGGCGCGGATG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCGGCGGCGGTGCTCTTaGTGCGAGTCGTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQRRRCS*CESSAA
Trigger: CGCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCCCCCGCCGCGCCGCTaGAGCATTCCCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEPPPRR*SIPGWK
Trigger: CTTCCACCCGGGAATGCTGCAGCGGCGCGGCGGGGG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCATCCCCAAGGTGGAGTaGTCCTCCAGCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPIPKVE*SSSQGQ
Trigger: CTGTCCCTGGCTGGAGGAGCACTCCACCTTGGGGAT...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGACCCCTGTGAACCGTaGCTGAGATTCATGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGDPCEP*LRFMGF
Trigger: GAAACCCATGAATCTCAGGCACGGTTCACAGGGGTC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCTCTGCCCATTCCTATaGAGCATCCTGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLLCPFL*SILQDR
Trigger: CCTGTCCTGCAGGATGCTGCATAGGAATGGGCAGAG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGGTCTCTGTGAAGCATaGTGCGCTGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLGLCEA*CAATCT
Trigger: TGTGCATGTGGCAGCGCACCATGCTTCACAGAGACC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPREGDT*ATSLGQ
Trigger: TTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGATGAGGAGGCCCCATaGCCTGCCCACTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPDEEAP*PAHCFQ
Trigger: TTGGAAACAGTGGGCAGGTCATGGGGCCTCCTCATC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACATCCGCGCCACTCCTaGAAAGGTCCAAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPHPRHS*KGPSHN
Trigger: ATTGTGACTTGGACCTTTTCAGGAGTGGCGCGGATG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCGGCGGCGGTGCTCTTaGTGCGAGTCGTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSERRRCS*CESSAA
Trigger: CGCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGTGTGACCCCGGCCCCTaGCTCGGAGGTCGGACGGTG +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSECDPGP*LGGRTV
Trigger: CACCGTCCGACCTCCGAGGCAGGGGCCGGGGTCACA...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGACGGTGGACGGTGAGTaGACCAAAGGACTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGTVDGE*TKGLWN
Trigger: ATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGT...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGGGCGAATCCTGCACCTaGCTCGGTGTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQGESCT*LGVGPG
Trigger: CCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCC...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGTTGCTAAGTCTGAGTTaGGGACATGGTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGLLSLS*GHGGSE
Trigger: CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAA...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCCGGTGATGGGGCACTaGAGCAGCCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQPVMGH*SSPTSW
Trigger: CCAGCTGGTGGGGCTGCTCCAGTGCCCCATCACCGG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGACATCTCTGCCCCTATaGACCACGAGAACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGTSLPL*TTRTEV
Trigger: GACTTCAGTTCTCGTGGTCCATAGGGGCAGAGATGT...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGCCGGACCCTTTGTCTaGGGCCGGGCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPAGPFV*GRARRS
Trigger: GGAGCGGCGAGCCCGGCCTCAGACAAAGGGTCCGGC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGCCGGACCCTTTGTCTaGGGCCGGGCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSAGPFV*GRARRS
Trigger: GGAGCGGCGAGCCCGGCCTCAGACAAAGGGTCCGGC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLGVQQR*ISTLWV
Trigger: CACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCAAGGGGTGTCCTCACTaGCCTCGTGAAACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPKGCPH*PRETCP
Trigger: TGGACACGTTTCACGAGGTCAGTGAGGACACCCCTT...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGCTTTGGAACTGGGCATaGAGATCTTTGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGLWNWA*RSLHHK
Trigger: CTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAG...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGGGAGACAGAACACTTaGGGTCAAGTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPGRQNT*GQVLRQ
Trigger: CTGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACAAGGGCTCCTCTGCTaGGTGCATGGCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAQGLLC*VHGLAG
Trigger: GCCTGCCAGGCCATGCACTCAGCAGAGGAGCCCTTG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACAAGGGCTCCTCTGCTaGGTGCATGGCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAQGLLC*VHGLAG
Trigger: GCCTGCCAGGCCATGCACTCAGCAGAGGAGCCCTTG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAACGGTGGACGGTGAGTaGACCAAAGGACTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPTVDGE*TKGLWN
Trigger: ATTCCAAAGTCCTTTGGTGCACTCACCGTCCACCGT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGAGGGTCCGCCTTGTGTaGCCGCCTCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQRVRLV*PPQWRQ
Trigger: CTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCT...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACATCCAGGACATCTCTaGCCATTCCTATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPHPGHL*PFLCSI
Trigger: GATGCTGCATAGGAATGGGCAGAGATGTCCTGGATG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGTCCATCTTAGCACCTaGTTCTGGCAAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPVHLST*FWQERG
Trigger: GCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGAC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGGTGGAAGTTGGCGTaGCGGCGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGWKLA*RRACLV
Trigger: GACCAAGCACGCGCGCCGCCACGCCAACTTCCACCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGTGCAGCATTCCCGGGTaGAAGTTGGCGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQCSIPG*KLAWRR
Trigger: GCGCCGCCACGCCAACTTCCACCCGGGAATGCTGCA...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCACTCCACCAGACTGGCTaGCCTGCTCTGTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEALHQTG*PALSPA
Trigger: CGCTGGGGACAGAGCAGGCCAGCCAGTCTGGTGGAG...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCTCCACCAGACTGGCTaGCCTGCTCTGTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQLHQTG*PALSPA
Trigger: CGCTGGGGACAGAGCAGGCCAGCCAGTCTGGTGGAG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCAGCAGCCCCACCAGCTaGGTGTGGCCTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLSSPTS*VWPGAS
Trigger: GGAGGCTCCAGGCCACACCCAGCTGGTGGGGCTGCT...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCCGGTGATGGGGCACTaGAGCAGCCCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLPVMGH*SSPTSW
Trigger: CCAGCTGGTGGGGCTGCTCCAGTGCCCCATCACCGG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCAGCCAGCCAGACGCTaGGCTCCACCAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEQPARR*APPDWL
Trigger: CAGCCAGTCTGGTGGAGCTCAGCGTCTGGCTGGCTG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCAGGCACAAACGTCAGTaGGCACATCTGCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPRHKRQ*AHLLPT
Trigger: TGTTGGGAGCAGATGTGCTCACTGACGTTTGTGCCT...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACAGGGTGCAGAGGGCTaGAGGCCCCCTCCACTATCC +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIQGAEG*RPPPLS
Trigger: GGATAGTGGAGGGGGCCTTCAGCCCTCTGCACCCTG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACGGCGGTGCTCTTGCTaGGAGTCGTCAGCCGCGCAT +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIRRCSC*ESSAAH
Trigger: ATGCGCGGCTGACGACTCGCAGCAAGAGCACCGCCG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCGGCGGTGCTCTTGCTaGGAGTCGTCAGCCGCGCAT +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLRRCSC*ESSAAH
Trigger: ATGCGCGGCTGACGACTCGCAGCAAGAGCACCGCCG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGCGGGCGCCGGCGCTTaGTGGTTGAGGTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSAGAGA*WLRSAR
Trigger: CCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGCGGAGGAAATAGAATaGGCGCTCTCCGACAGCATT +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPAEEIE*ALSDSI
Trigger: AATGCTGTCGGAGAGCGCGCATTCTATTTCCTCCGC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCATGTCGTGGGTGGGGGTaGAGCAGGATGCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEACRGWG*SRMQVG
Trigger: CCCTACCTGCATCCTGCTGCACCCCCACCCACGACA...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGTGTGCCCGCCTCAGTaGAGGCAGCGTTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLVCPPQ*RQRSKA
Trigger: GGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACAC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGTAGGAGAGGGCTCCTaGAGGCGGGGTGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTVGEGS*RRGVRQ
Trigger: CTGCCTCACACCCCGCCTTCAGGAGCCCTCTCCTAC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAATGGACCACGAGAACTaGAGTCCCAAAATAAGGGTT +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPMDHEN*SPKIRV
Trigger: AACCCTTATTTTGGGACTTCAGTTCTCGTGGTCCAT...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCACCCCTCACTGGTCTaGGCTGTGTTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQHPSLV*AVFRVL
Trigger: CAGCACCCTGAACACAGCTCAGACCAGTGAGGGGTG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCGAGTGTGGCTTTCTCTaGCTCACACGAAAACAACTT +
Preference number: 4 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLECGFL*LTRKQL
Trigger: AAGTTGTTTTCGTGTGAGGCAGAGAAAGCCACACTC...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGCCACTCCCTCTCCCTaGCTTGGGGAACGGTGGACG +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTATPSP*LGERWT
Trigger: CGTCCACCGTTCCCCAAGGCAGGGAGAGGGAGTGGC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGGCGAATCCTGCACCTaGCTCGGTGTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPGESCT*LGVGPG
Trigger: CCCAGGCCCCACACCGAGGCAGGTGCAGGATTCGCC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGGACTCACGAGGGGGTaGGAGCGGCTGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTGLTRG*ERLLMA
Trigger: AGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAAACAGACCCACAGGCTaGCCAGCCAGCCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQINRPTG*PASQTL
Trigger: CAGCGTCTGGCTGGCTGGCCAGCCTGTGGGTCTGTT...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACCTGGGCCACAAGCCTaGGTCAACACTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAPGPQA*VNTPAI
Trigger: GATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACGTCTGACCCCTCCCTaGAGAGCACTTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWARLTPP*RALCQP
Trigger: AGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACACTTCATGATGAAATaGAAACCTGCCCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPHFMMK*KPALED
Trigger: GTCCTCAAGGGCAGGTTTCCATTTCATCATGAAGTG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAGAGCCACATGGGAGGTaGCCTCTTGCTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAEPHGR*PLAPLR
Trigger: CCTGAGAGGAGCAAGAGGCCACCTCCCATGTGGCTC...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACACCCCTCACTGGTCTaGGCTGTGTTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIHPSLV*AVFRVL
Trigger: CAGCACCCTGAACACAGCTCAGACCAGTGAGGGGTG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGCCCATCCCCACCTCTaGATCACCCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIAHPHL*ITPHWS
Trigger: AGACCAGTGAGGGGTGATTCAGAGGTGGGGATGGGC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCTTGAGGTCAAGTCCTaGGGCAGAGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLLEVKS*GRVASP
Trigger: AGGGCTGGCCACTCTGCCTCAGGACTTGACCTCAAG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACACATAGGCGGCGGCTaGCATGCTGCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSHIGGG*HAAGWG
Trigger: GCCCCAGCCCGCAGCATGGCAGCCGCCGCCTATGTG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCATCCCCAAGGTGGAGTaGTCCTCCAGCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLIPKVE*SSSQGQ
Trigger: CTGTCCCTGGCTGGAGGAGCACTCCACCTTGGGGAT...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGGTCGGACGGTGCAGTaGTACGCTCAGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPGRTVQ*YAQPGL
Trigger: CAGCCCTGGCTGAGCGTAGCACTGCACCGTCCGACC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLVLHAF*WDTEKR
Trigger: CCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGAC...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCTGGTGCGCTGCCACATaGACAGCCGCTCACACAGAC +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLWCAAT*TAAHTD
Trigger: GTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACTGTGTTCAGGGTGCTaGAAGGACTGGGATCGCCAG +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWALCSGC*KDWDRQ
Trigger: CTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCTTCGCCGCGCATTGTaGCAGGCGGGACAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSLRRAL*QAGQLP
Trigger: CGGCAGCTGTCCCGCCTGCCACAATGCGCGGCGAAG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307145.4
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGGTGGAAGTTGGCGTaGCGGCGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGWKLA*RRACLV
Trigger: GACCAAGCACGCGCGCCGCCACGCCAACTTCCACCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGACGCTCAGCCAGGGCTaGCATCTCTGCTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSETLSQG*HLCFQC
Trigger: GCACTGGAAGCAGAGATGCCAGCCCTGGCTGAGCGT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCACGCTCAGCCAGGGCTaGCATCTCTGCTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLTLSQG*HLCFQC
Trigger: GCACTGGAAGCAGAGATGCCAGCCCTGGCTGAGCGT...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACTGCATGCCTTCTGCTaGGACACGGAGAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWALHAFC*DTEKRS
Trigger: ACTCCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAAGCAGCCCCACCAGCTaGGTGTGGCCTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESSPTS*VWPGAS
Trigger: GGAGGCTCCAGGCCACACCCAGCTGGTGGGGCTGCT...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCGTCTGACCCCTCCCTaGAGAGCACTTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLRLTPP*RALCQP
Trigger: AGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATATGCACTCGAGTGTCGTaGGTGGGGGTGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQICTRVS*VGVQQD
Trigger: ATCCTGCTGCACCCCCACCCACGACACTCGAGTGCA...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGGGGTGCTGCAAGGACTaGGATCGCCAGTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEGCCKD*DRQCLR
Trigger: TCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCC...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGGAGCCACATGGGAGGTaGCCTCTTGCTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEEPHGR*PLAPLR
Trigger: CCTGAGAGGAGCAAGAGGCCACCTCCCATGTGGCTC...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp GAGGAGGAGTCCAGGGGAAACGGAGAGGCTGGAGGTTaGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: EEESRGNGEAGG*LSLSWGHGGSE
Trigger: CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCCCCTGGACTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp TTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTaGTGTGCCCGCCTCAGTGGAGGCAGCGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LKKMEAVSGGSA*CARLSGGSVPR
Trigger: CCTTGGAACGCTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp CCTGGGAATAAAGTCAGGGTTAGGAGTGAGGCGATCTaGCACTCGAGTGTCGTGGGTGGGGGTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGNKVRVRSEAI*HSSVVGGGAAG
Trigger: TCCTGCTGCACCCCCACCCACGACACTCGAGTGCAAGATCGCCTCACTCCTAACCCTGACTTTATTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCCGGGCACCGAAGAGTaGGCGCATGGGGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQPGTEE*AHGARG
Trigger: CCCGCGCGCCCCATGCGCTCACTCTTCGGTGCCCGG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAAGCCAGCCAAAACAGTaGCCATCAGCTGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEASQPKQ*PSAVGS
Trigger: ACTGCCCACAGCTGATGGTCACTGTTTTGGCTGGCT...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGGAACGGTGGACGGTaGGTGCACCAAAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGNGGR*VHQRTL
Trigger: CAAAGTCCTTTGGTGCACTCACCGTCCACCGTTCCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCCTGTGAACCGTGCCTaGGATTCATGGGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQPVNRA*DSWVSP
Trigger: GGGAGAAACCCATGAATCTCAGGCACGGTTCACAGG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCATGCAGTCCTGCCAGCTaGAGGCGAAGGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPCSPAS*RRRASH
Trigger: GTGAGAGGCCCTTCGCCTGCAGCTGGCAGGACTGCA...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATATTCTTGTTGCAGTCCTaGCAGCTGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIFLLQS*QLQAKG
Trigger: GCCCTTCGCCTGCAGCTGGCAGGACTGCAACAAGAA...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCAGGGCTGGCATCTCTaGTTCCAGTGCTCCCTAGCG +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTQGWHL*FQCSLA
Trigger: CGCTAGGGAGCACTGGAAGCAGAGATGCCAGCCCTG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCTGTGCCTGAGCAGCTaGTGTGGACAGAGCGTACCT +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLLCLSS*CGQSVP
Trigger: AGGTACGCTCTGTCCACAGCAGCTGCTCAGGCACAG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACTCTGCCCATTCCTATaGAGCATCCTGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWALCPFL*SILQDR
Trigger: CCTGTCCTGCAGGATGCTGCATAGGAATGGGCAGAG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCTGTGTTCAGGGTGCTaGAAGGACTGGGATCGCCAG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLLCSGC*KDWDRQ
Trigger: CTGGCGATCCCAGTCCTTGCAGCACCCTGAACACAG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGGTTGGGTGGCACCCCTaGCCAGCTGAGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEVGWHP*PAEILN
Trigger: ATTCAGGATCTCAGCTGGGCAGGGGTGCCACCCAAC...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACAAATAAGCACGCACTaGGACCTGTCCACGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIQISTH*DLSTGP
Trigger: AGGGCCCGTGGACAGGTCGCAGTGCGTGCTTATTTG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGGCGCCGGCGCTTGCTaGTTGAGGTCCGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSGAGAC*LRSARI
Trigger: GATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATGCAGCATTCCCGGGTaGAAGTTGGCGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTECSIPG*KLAWRR
Trigger: GCGCCGCCACGCCAACTTCCACCCGGGAATGCTGCA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGCTAGGCCTGGGTCCTaGGTTTGTGCTGCACCCCAT +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTARPGS*VCAAPH
Trigger: ATGGGGTGCAGCACAAACCCAGGACCCAGGCCTAGC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCCTTCCGTGACACCCTaGGCAGATCACAAGGACGTC +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLPSVTP*ADHKDV
Trigger: GACGTCCTTGTGATCTGCCCAGGGTGTCACGGAAGG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGCACCTGCCTCGGTGTaGGGCCTGGGAATAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLAPASV*GLGIKS
Trigger: TGACTTTATTCCCAGGCCCCACACCGAGGCAGGTGC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCAGGAAAGATGAAACGTaGCCTTCGGAATTATGGTGG +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPRKDET*PSELWW
Trigger: CCACCATAATTCCGAAGGCCACGTTTCATCTTTCCT...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCGCAGATGGGGCAGCTaGACTTCTTCTCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSRRWGS*TSSRPC
Trigger: ACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGCG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGACAGAATGGTCTCTGTaGAGCATGGTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSETEWSL*SMVRCH
Trigger: GTGGCAGCGCACCATGCTTCACAGAGACCATTCTGT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGATAGCATGGCAGGGCTaGGTAGAAGCAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEIAWQG*VEAGWP
Trigger: TGGCCATCCTGCTTCTACTCAGCCCTGCCATGCTAT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATATCGGCCAATCCCAGCTaGCACACAGTGGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQISANPS*HTVVRS
Trigger: GCTTCTTACCACTGTGTGTCAGCTGGGATTGGCCGA...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCCTGTGAACCGTGCCTaGGATTCATGGGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEPVNRA*DSWVSP
Trigger: GGGAGAAACCCATGAATCTCAGGCACGGTTCACAGG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCTTACTGGTTGTGATGTaGCCAACACATTACACCCTT +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPLLVVM*PTHYTL
Trigger: AAGGGTGTAATGTGTTGGTCACATCACAACCAGTAA...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACCCCCGCCGCGCCGCTaGAGCATTCCCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKPPPRR*SIPGWK
Trigger: CTTCCACCCGGGAATGCTGCAGCGGCGCGGCGGGGG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACCAGACTGGCTGGCCTaGTCTGTCCCCAGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEPDWLA*SVPSVF
Trigger: GAACACGCTGGGGACAGAGCAGGCCAGCCAGTCTGG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATATGTCTCAGAATCAGCTaGGTTGCAAGCCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQICLRIS*VASPAR
Trigger: CCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACA...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATCGGAGGTCGGACGGTaGAGTGCTACGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESEVGR*SATLSQ
Trigger: CTGGCTGAGCGTAGCACTGCACCGTCCGACCTCCGA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIVVTGS*MPSAGT
Trigger: TGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTAC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCCTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTLCEAW*AATCTA
Trigger: GGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAG...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACTGCTCCTCCTCTCCTaGCAGGAGAAGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPLLLLS*QEKAGD
Trigger: ATCACCGGCCTTCTCCTGGCAGGAGAGGAGGAGCAG...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCTGCTCCTCCTCTCCTaGCAGGAGAAGGCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSLLLLS*QEKAGD
Trigger: ATCACCGGCCTTCTCCTGGCAGGAGAGGAGGAGCAG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGGCATGAAGATCTTTaGACCACAAGCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGHEDL*TTSTQG
Trigger: GCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACAGCTGGGTGTGGCCTaGAGCCTCCAGGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEQLGVA*SLQAGQ
Trigger: TTGTCCTGCCTGGAGGCTCCAGGCCACACCCAGCTG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACCTGGGCCACAAGCCTaGGTCAACACTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPPGPQA*VNTPAI
Trigger: GATGGCTGGAGTGTTGACCCAGGCTTGTGGCCCAGG...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCAGGGAAGGTGATACCTaGGCCACAAGCCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLREGDT*ATSLGQ
Trigger: TTGACCCAGGCTTGTGGCCCAGGTATCACCTTCCCT...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAGCACACACTCTGTCCTaGGCCCTTGTATTTACAGGC +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAAHTLS*ALVFTG
Trigger: GCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGC...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAGCACACACTCTGTCCTaGGCCCTTGTATTTACAGGC +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAAHTLS*ALVFTG
Trigger: GCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGC...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCTGCCTTGGGGAACGGTaGACGGTGAGTGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTCLGER*TVSAPK
Trigger: CTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCA...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATCCCTCTCCCTGCCTTaGGGAACGGTGGACGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESLSLP*GTVDGE
Trigger: CTCACCGTCCACCGTTCCCCAAGGCAGGGAGAGGGA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCTCGAGTGTCGTGGGTaGGGGTGCAGCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSLECRG*GCSRMQ
Trigger: CTGCATCCTGCTGCACCCCCACCCACGACACTCGAG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCCGGAGGCTGCACCATaGCGAATCCTGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSPEAAP*RILHLP
Trigger: AGGCAGGTGCAGGATTCGCCATGGTGCAGCCTCCGG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGGGTGCTGCAAGGACTaGGATCGCCAGTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPGCCKD*DRQCLR
Trigger: TCTGAGGCACTGGCGATCCCAGTCCTTGCAGCACCC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCTATGCATCCAAGTTCTaGTACAAAGGTCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPYASKF*YKGLRN
Trigger: ATTCCGGAGACCTTTGTACCAGAACTTGGATGCATA...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGCGGCTGTAGTCGCTaGGGGAGCCGGTCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKSGCSR*GSRSAS
Trigger: GCTCGCGGACCGGCTCCCTCAGCGACTACAGCCGCT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGAGTTTAAGCCGCAGATaGTTCAGGAGGGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSESLSRR*FRRVWP
Trigger: TGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGGGAGACAGAACACTTaGGGTCAAGTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTGRQNT*GQVLRQ
Trigger: CTGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGCCCAGCTGAGATCCTaGATGGGTCCCGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSAQLRS*MGPEGV
Trigger: CACTCCCTCGGGACCCATTCAGGATCTCAGCTGGGC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTCACATAGGCGGCGGCTaGCATGCTGCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFHIGGG*HAAGWG
Trigger: GCCCCAGCCCGCAGCATGGCAGCCGCCGCCTATGTG...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACACTTGTGCTTCCTCTaGGGGGACTCGAGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSHLCFL*GDSRSA
Trigger: CGCCGACCTCGAGTCCCCGCAGAGGAAGCACAAGTG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACAGAATCAGCTGCGTTaGAAGCCCAGCCAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPQNQLR*KPSQAR
Trigger: ACGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTG...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCCAGGGCTGGCATCTCTaGTTCCAGTGCTCCCTAGCG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSQGWHL*FQCSLA
Trigger: CGCTAGGGAGCACTGGAAGCAGAGATGCCAGCCCTG...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACATCCAGGACATCTCTaGCCATTCCTATGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAHPGHL*PFLCSI
Trigger: GATGCTGCATAGGAATGGGCAGAGATGTCCTGGATG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATGTCGTGGGTGGGGGTaGAGCAGGATGCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSCRGWG*SRMQVG
Trigger: CCCTACCTGCATCCTGCTGCACCCCCACCCACGACA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGGAGTGAGGCGATCTTaGACTCGAGTGTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPGVRRS*TRVSWV
Trigger: CACCCACGACACTCGAGTGCAAGATCGCCTCACTCC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGAGCTGTGTTCAGGGTaGTGCAAGGACTGGGATCGC +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSELCSG*CKDWDR
Trigger: GCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATGGGAGGTGGCCTCTTaGTCCTCTCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSWEVAS*SSQGSQ
Trigger: CTGGCTGCCCTGAGAGGAGCAAGAGGCCACCTCCCA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCGAAGAGTGAGCGCATaGGGCGCGCGGGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQRRVSA*GARATG
Trigger: CCCAGTCGCCCGCGCGCCCCATGCGCTCACTCTTCG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGGAGCGGCTGCTCATaGCTGTGGCGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGSGCS*LWRAQG
Trigger: GCCCTGAGCCCGCCACAGCCATGAGCAGCCGCTCCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCATTGCTAAGTCTGAGTTaGGGACATGGTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEALLSLS*GHGGSE
Trigger: CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAA...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCAGTGACCATCAGCTGTaGGCAGTGGCTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSSDHQL*AVARPG
Trigger: CCCAGGCCTAGCCACTGCCCACAGCTGATGGTCACT...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTTGCCTTGGGGAACGGTaGACGGTGAGTGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSCLGER*TVSAPK
Trigger: CTTTGGTGCACTCACCGTCCACCGTTCCCCAAGGCA...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCCGGCGCTTGCTGGTTaGGGTCCGCTAGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQPALAG*GPLGSA
Trigger: CGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTCCGGCGCTTGCTGGTTaGGGTCCGCTAGGATCCGCG +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFPALAG*GPLGSA
Trigger: CGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGG...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCGGGGTTCAACAACGCTaGATCTCAACTTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLGVQQR*ISTLWV
Trigger: CACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCC...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGAAACGTGTCCATCCCTaGGAAAGGGGGTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEKRVHP*ERGFNN
Trigger: GTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCATCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPSSLTS*NVSIPE
Trigger: CTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGA...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTCCAGGAGAAGGCCGGTaGTGGGGCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFPGEGR*WGTGAA
Trigger: GGCTGCTCCAGTGCCCCATCACCGGCCTTCTCCTGG...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGAAAATCTCCTTCCGTaGCACCCTGGGCAGATCACA +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTENLLP*HPGQIT
Trigger: TGTGATCTGCCCAGGGTGTCACGGAAGGAGATTTTC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGCCCATCCCCACCTCTaGATCACCCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSAHPHL*ITPHWS
Trigger: AGACCAGTGAGGGGTGATTCAGAGGTGGGGATGGGC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGGGAAAACAGGACCCTaGGGCCTTAAGAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLGKTGP*GLKKAV
Trigger: AACAGCTTTCTTAAGGCCTCAGGGTCCTGTTTTCCC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGCGGAGGAAATAGAATaGGCGCTCTCCGACAGCATT +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTAEEIE*ALSDSI
Trigger: AATGCTGTCGGAGAGCGCGCATTCTATTTCCTCCGC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGGATTTCTCTCCTGGTaGCCTACCCCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSGFLSW*PTPISQ
Trigger: CTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTTTTGTACCCGGAGGCTaGACCATGGCGAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSFVPGG*TMANPA
Trigger: TGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAA...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGACTGGGATCGCCAGTaGCTCAGATGTTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPDWDRQ*LRCLYP
Trigger: CGGGTACAAACATCTGAGGCACTGGCGATCCCAGTC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCGGGCAAACTCGGAACTaGATGTGCCACCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLGQTRN*MCHQEF
Trigger: AAATTCCTGGTGGCACATCCAGTTCCGAGTTTGCCC...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCCGCAACTTTCTATCTaGCATTCCCTGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CLKKMEAVSGGSALCARLPQLSI*HSLRRK
Trigger: TTTCCTCCGCAGGGAATGCCAGATAGAAAGTTGCGG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACCGCAACTTTCTATCTaGCATTCCCTGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIPQLSI*HSLRRK
Trigger: TTTCCTCCGCAGGGAATGCCAGATAGAAAGTTGCGG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCGATCCAGTAGGCATTTaGGGAGCTGACAACCGTTCC +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTDPVGI*GADNRS
Trigger: GGAACGGTTGTCAGCTCCCCAAATGCCTACTGGATC...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCCTTAGCACCTGCTTCTaGCAAGAAAGAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLLSTCF*QERGWS
Trigger: AGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAG...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGTTCGGCTCACACACCTaGTTTCCAAATAAGCACGCA +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQFGSHT*FPNKHA
Trigger: TGCGTGCTTATTTGGAAACCAGGTGTGTGAGCCGAA...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGCTGAGTGCATGGCCTaGCAGGCATTCGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSAECMA*QAFGSH
Trigger: GTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATCCTCACTGACCTCGTaGAACGTGTCCATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESSLTS*NVSIPE
Trigger: CTCAGGGATGGACACGTTTCACGAGGTCAGTGAGGA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCAAGGGGTGTCCTCACTaGCCTCGTGAAACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSKGCPH*PRETCP
Trigger: TGGACACGTTTCACGAGGTCAGTGAGGACACCCCTT...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAACGGCATACTGTGCCTaGGCAGCTGCTGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSTAYCA*AAAVDR
Trigger: TCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGT...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTCGGCCAATCCCAGCTaGCACACAGTGGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSSANPS*HTVVRS
Trigger: GCTTCTTACCACTGTGTGTCAGCTGGGATTGGCCGA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGAAAATCTCCTTCCGTaGCACCCTGGGCAGATCACA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSENLLP*HPGQIT
Trigger: TGTGATCTGCCCAGGGTGTCACGGAAGGAGATTTTC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTTCTGGACACACCGGGTGGGGAGACAGAACACTTGAGGTCAAGTCCTGAGGCAAAAAATGGAAGACCCTaGAATAGACGCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLDTPGGETEHLRSSPEAKNGRP*NRRSLG
Trigger: TCCCAGACTGCGTCTATTTCAGGGTCTTCCATTTTT...TGCCTCAGGACTTGACCTCAAGTGTTCTGTCTCCCCACCCGGTGTGTCCAGAAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSVSEHI*SQQTHR
Trigger: CCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGAC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTGTCTCAGAATCAGCTaGGTTGCAAGCCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSCLRIS*VASPAR
Trigger: CCTGGCTGGGCTTGCAACGCAGCTGATTCTGAGACA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGGTCGGACGGTGCAGTaGTACGCTCAGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKGRTVQ*YAQPGL
Trigger: CAGCCCTGGCTGAGCGTAGCACTGCACCGTCCGACC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGTAGTGACAGGGTCCTaGATGCCTTCTGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSVVTGS*MPSAGT
Trigger: TGTCCCAGCAGAAGGCATGCAGGACCCTGTCACTAC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGGAGGCCCCATGACCTaGCCACTGTTTCCAACAAAA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSGGPMT*PLFPTK
Trigger: TTTTGTTGGAAACAGTGGGCAGGTCATGGGGCCTCC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCCAGGGCCGTTCCTTTaGATCAAAATAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQPGPFL*IKIGTH
Trigger: ATGAGTACCTATTTTGATGCAAAGGAACGGCCCTGG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACCCTGGAGAGCACTTTaGCAGCCTCCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKPWRAL*QPPRDG
Trigger: CCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAAGGGTCCGCCTTGTGTaGCCGCCTCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKRVRLV*PPQWRQ
Trigger: CTGCCTCCACTGAGGCGGGCACACAAGGCGGACCCT...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGGAGTGAGGCGATCTTaGACTCGAGTGTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSGVRRS*TRVSWV
Trigger: CACCCACGACACTCGAGTGCAAGATCGCCTCACTCC...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGACAAGGCCACACTATTaGTCAGATCACATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQTRPHY*SDHIFL
Trigger: CAGGAAGATGTGATCTGAGCAATAGTGTGGCCTTGT...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAAATGTATTCAGAGTGTaGCTTTCTCTGCCTCACACG +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWANVFRV*LSLPHT
Trigger: CGTGTGAGGCAGAGAAAGCCACACTCTGAATACATT...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGTGTGCCCGCCTCAGTaGAGGCAGCGTTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKVCPPQ*RQRSKA
Trigger: GGCCTTGGAACGCTGCCTCCACTGAGGCGGGCACAC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGATCCAGTAGGCATTTaGGGAGCTGACAACCGTTCC +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSDPVGI*GADNRS
Trigger: GGAACGGTTGTCAGCTCCCCAAATGCCTACTGGATC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAAGCCAGCCAAAACAGTaGCCATCAGCTGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSSQPKQ*PSAVGS
Trigger: ACTGCCCACAGCTGATGGTCACTGTTTTGGCTGGCT...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTAGGCAACCTTCACTTTaGCATCTCTGCCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSRQPSL*HLCPYG
Trigger: TCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCT...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGCCCAGCTGAGATCCTaGATGGGTCCCGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKAQLRS*MGPEGV
Trigger: CACTCCCTCGGGACCCATTCAGGATCTCAGCTGGGC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTTGGGCTTTTGGCAAATaGTTCCAGAGAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSWAFGK*FQRSST
Trigger: GGTGGAGCTTCTCTGGAATCATTTGCCAAAAGCCCA...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCACTTGTGCTTCCTCTaGGGGGACTCGAGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQHLCFL*GDSRSA
Trigger: CGCCGACCTCGAGTCCCCGCAGAGGAAGCACAAGTG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATGCAGTCCTGCCAGCTaGAGGCGAAGGGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKCSPAS*RRRASH
Trigger: GTGAGAGGCCCTTCGCCTGCAGCTGGCAGGACTGCA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCATGGGTGTATCTATTGTaGAATTTGGTGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAWVYLL*NLVGGV
Trigger: AACACCACCCACCAAATTGCACAATAGATACACCCA...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACACCATGGCGAATCCTaGACCTGCCTCGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKHHGES*TCLGVG
Trigger: CCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCACCATGGCGAATCCTaGACCTGCCTCGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQHHGES*TCLGVG
Trigger: CCCCACACCGAGGCAGGTGCAGGATTCGCCATGGTG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGTCCATCTTAGCACCTaGTTCTGGCAAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPVHLST*FWQERG
Trigger: GCCTCTTTCTTGCCAGAAGCAGGTGCTAAGATGGAC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATGGGAGGTGGCCTCTTaGTCCTCTCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKWEVAS*SSQGSQ
Trigger: CTGGCTGCCCTGAGAGGAGCAAGAGGCCACCTCCCA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGGGCAAACTCGGAACTaGATGTGCCACCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPGQTRN*MCHQEF
Trigger: AAATTCCTGGTGGCACATCCAGTTCCGAGTTTGCCC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGGAAACGGAGAGGCTaGAGGTTTGCTAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGKRRG*RFAKSE
Trigger: CTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATACAAAACAGGTATCTCTaGCAAGATACCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIQNRYL*QDTLSP
Trigger: TGGACTCAGGGTATCTTGCCAGAGATACCTGTTTTG...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCACACGAAAACAACTTTaGGAGGGACCTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLTRKQL*EGPHFG
Trigger: TCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGT...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACACGCACGCACACACTCTGTCCTGGGCCCTTGTATTTACAGGCCTCAACTCTCTCTGCCTTGGGCTTTTaGCAAATGATTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TRTHTLCPGPLYLQASTLSALGF*QMIPEK
Trigger: CTTCTCTGGAATCATTTGCCAAAAGCCCAAGGCAGA...GAGAGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAAGGAAAGATGAAACGTaGCCTTCGGAATTATGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIRKDET*PSELWW
Trigger: CCACCATAATTCCGAAGGCCACGTTTCATCTTTCCT...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACAACCAGAGTGGAGGTaGCCCTCTCCCTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKQPEWR*PSPCQF
Trigger: GAACTGGCAGGGAGAGGGTCACCTCCACTCTGGTTG...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGAACCACTTTGGGAATaGAGACACGCTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSEPLWE*RHALMP
Trigger: TGGCATAAGAGCGTGTCTTCATTCCCAAAGTGGTTC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCTTGAGGTCAAGTCCTaGGGCAGAGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQLEVKS*GRVASP
Trigger: AGGGCTGGCCACTCTGCCTCAGGACTTGACCTCAAG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGTCCTGCATGCCTTCTaGTGGGACACGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKVLHAF*WDTEKR
Trigger: CCGCTTCTCCGTGTCCCAGCAGAAGGCATGCAGGAC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGCTAGGCCTGGGTCCTaGGTTTGTGCTGCACCCCAT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKARPGS*VCAAPH
Trigger: ATGGGGTGCAGCACAAACCCAGGACCCAGGCCTAGC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAAGTGACCATCAGCTGTaGGCAGTGGCTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKSDHQL*AVARPG
Trigger: CCCAGGCCTAGCCACTGCCCACAGCTGATGGTCACT...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTAGCCCCAACACAGCATaGCAGCCAGAGGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFSPNTA*QPEGPA
Trigger: AGCTGGTCCCTCTGGCTGCCATGCTGTGTTGGGGCT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGAGCCCCAACACAGCATaGCAGCCAGAGGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQSPNTA*QPEGPA
Trigger: AGCTGGTCCCTCTGGCTGCCATGCTGTGTTGGGGCT...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCACACGAAAACAACTTTaGGAGGGACCTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTTRKQL*EGPHFG
Trigger: TCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGT...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGGAAATAGACGCAGTCTaGGAAAACATTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQEIDAV*ENILHV
Trigger: AACATGCAGAATGTTTTCCCAGACTGCGTCTATTTC...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAATGCACTCGAGTGTCGTaGGTGGGGGTGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKCTRVS*VGVQQD
Trigger: ATCCTGCTGCACCCCCACCCACGACACTCGAGTGCA...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTCATCTTCCTGTTGGGTaGCACCCCTGCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFHLPVG*HPCPAE
Trigger: CTCAGCTGGGCAGGGGTGCCACCCAACAGGAAGATG...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGCTGAGTGCATGGCCTaGCAGGCATTCGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKAECMA*QAFGSH
Trigger: GTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp CTCCTGAAAAGGTCCAAGTCACAATGTTCCGGTCTCTaGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LLKRSKSQCSGL*LQNGLCEAWCA
Trigger: AGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATTGTGACTTGGACCTTTTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
3UTR CAA 72 bp GCCTCACACGAAAACAACTTTGGGAGGGACCTCACTTaGGAACTGGGCATGAAGATCTTTGCACCACAAGCA +
Preference number: 4 (lower is better)
Translates to: ASHENNFGRDLT*ELGMKIFAPQA
Trigger: TGCTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFRRKGR*YLGHKP
Trigger: AGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGAGGAGGAAGGGAAGGTaGTACCTGGGCCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQRRKGR*YLGHKP
Trigger: AGGCTTGTGGCCCAGGTATCACCTTCCCTTCCTCCT...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTACGGCATACTGTGCCTaGGCAGCTGCTGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFTAYCA*AAAVDR
Trigger: TCTGTCCACAGCAGCTGCTCAGGCACAGTATGCCGT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCGAACCACTTTGGGAATaGAGACACGCTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSEPLWE*RHALMP
Trigger: TGGCATAAGAGCGTGTCTTCATTCCCAAAGTGGTTC...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATTCTTGTTGCAGTCCTaGCAGCTGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKFLLQS*QLQAKG
Trigger: GCCCTTCGCCTGCAGCTGGCAGGACTGCAACAAGAA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTGCGCGAACTTCTTGTTaGAGTCCTGCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFARTSC*SPASCR
Trigger: CCTGCAGCTGGCAGGACTGCAACAAGAAGTTCGCGC...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAACTCGGAACTGGATGTaGCACCAGGAATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPTRNWM*HQEFLT
Trigger: TGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGT...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACTCTGTGAAGCATGGTaGGCTGCCACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKLCEAW*AATCTA
Trigger: GGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAG...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCCTGACGGCATACTGTaGCTGAGCAGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQPDGIL*LSSCCG
Trigger: TCCACAGCAGCTGCTCAGGCACAGTATGCCGTCAGG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTGAGCTGTGTTCAGGGTaGTGCAAGGACTGGGATCGC +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFELCSG*CKDWDR
Trigger: GCGATCCCAGTCCTTGCAGCACCCTGAACACAGCTC...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAACAAGGCCACACTATTaGTCAGATCACATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPTRPHY*SDHIFL
Trigger: CAGGAAGATGTGATCTGAGCAATAGTGTGGCCTTGT...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACAAATAAGCACGCACTaGGACCTGTCCACGGGCCCT +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKQISTH*DLSTGP
Trigger: AGGGCCCGTGGACAGGTCGCAGTGCGTGCTTATTTG...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATGGACCCTTGGATTCTaGCTTGGGCTTTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEWTLGF*LGLLAN
Trigger: ATTTGCCAAAAGCCCAAGGCAGAATCCAAGGGTCCA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCAAAACAGGTATCTCTaGCAAGATACCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSQNRYL*QDTLSP
Trigger: TGGACTCAGGGTATCTTGCCAGAGATACCTGTTTTG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACCTTCCGTGACACCCTaGGCAGATCACAAGGACGTC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKPSVTP*ADHKDV
Trigger: GACGTCCTTGTGATCTGCCCAGGGTGTCACGGAAGG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACTTAGCACCTGCTTCTaGCAAGAAAGAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSLSTCF*QERGWS
Trigger: AGACCAGCCTCTTTCTTGCCAGAAGCAGGTGCTAAG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATTCGGCTCACACACCTaGTTTCCAAATAAGCACGCA +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEFGSHT*FPNKHA
Trigger: TGCGTGCTTATTTGGAAACCAGGTGTGTGAGCCGAA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAATAGCATGGCAGGGCTaGGTAGAAGCAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKIAWQG*VEAGWP
Trigger: TGGCCATCCTGCTTCTACTCAGCCCTGCCATGCTAT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGGTCAGTGAGCACATCTaGTCCCAACAGACCCACAGG +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQVSEHI*SQQTHR
Trigger: CCTGTGGGTCTGTTGGGAGCAGATGTGCTCACTGAC...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCAATGTTCCGGTCTCTTaGTACAGAATGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSNVPVS*YRMVSV
Trigger: CACAGAGACCATTCTGTAGCAAGAGACCGGAACATT...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGGGGCATGAAGATCTTTaGACCACAAGCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQGHEDL*TTSTQG
Trigger: GCCCTGGGTGCTTGTGGTGCAAAGATCTTCATGCCC...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGATTTCTCTCCTGGTaGCCTACCCCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGFLSW*PTPISQ
Trigger: CTGGGAAATGGGGGTAGGGCACCAGGAGAGAAATCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATTTGTACCCGGAGGCTaGACCATGGCGAATCCTGCA +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKFVPGG*TMANPA
Trigger: TGCAGGATTCGCCATGGTGCAGCCTCCGGGTACAAA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGACTGGGATCGCCAGTaGCTCAGATGTTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKDWDRQ*LRCLYP
Trigger: CGGGTACAAACATCTGAGGCACTGGCGATCCCAGTC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTATGACAATGCATAGTTaGTCAGTAGTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSMTMHS*SVVPPF
Trigger: GAAAGGAGGCACTACTGAGCAACTATGCATTGTCAT...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGAGGATTTCTCTCCTaGTGCCCTACCCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGGFLS*CPTPIS
Trigger: GGAAATGGGGGTAGGGCACCAGGAGAGAAATCCTCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp TCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAGAGCTCTGCCTTGGGCTTTTaGCAAATGATTCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SKFWYKGLRNVSQTSLQSSALGF*QMIPEK
Trigger: CTTCTCTGGAATCATTTGCCAAAAGCCCAAGGCAGA...GCTCTGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTAGTTTAAGCCGCAGATaGTTCAGGAGGGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFSLSRR*FRRVWP
Trigger: TGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp CTGGGCCCTTGTATTTACAGGCCTCAACTCTCAGGAGGAAGGGAAGGTGATACCTCACTATTATTTCTATaGGTCCTATGGGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LGPCIYRPQLSGGREGDTSLLFL*VLWVPQ
Trigger: TTGAGGAACCCATAGGACTCATAGAAATAATAGTGA...GGTATCACCTTCCCTTCCTCCTGAGAGTTGAGGCCTGTAAATACAAGGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGGAGGCCCCATGACCTaGCCACTGTTTCCAACAAAA +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKGGPMT*PLFPTK
Trigger: TTTTGTTGGAAACAGTGGGCAGGTCATGGGGCCTCC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCAAATGTTCCGGTCTCTTaGTACAGAATGGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSNVPVS*YRMVSV
Trigger: CACAGAGACCATTCTGTAGCAAGAGACCGGAACATT...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTGACCCCTGTGAACCGTaGCTGAGATTCATGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFDPCEP*LRFMGF
Trigger: GAAACCCATGAATCTCAGGCACGGTTCACAGGGGTC...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAGGGAAACGGAGAGGCTaGAGGTTTGCTAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKGKRRG*RFAKSE
Trigger: CTCAGACTTAGCAAACCTCCAGCCTCTCCGTTTCCC...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCAGTATCAGTAGTAAGGTaGACTATGCATCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPVSVVR*TMHPSS
Trigger: AGAACTTGGATGCATAGTCCACCTTACTACTGATAC...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAAACGTGTCCATCCCTaGGAAAGGGGGTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKKRVHP*ERGFNN
Trigger: GTTGTTGAACCCCCTTTCTCAGGGATGGACACGTTT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTAGGCAACCTTCACTTTaGCATCTCTGCCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFRQPSL*HLCPYG
Trigger: TCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGGGAAAACAGGACCCTaGGGCCTTAAGAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKGKTGP*GLKKAV
Trigger: AACAGCTTTCTTAAGGCCTCAGGGTCCTGTTTTCCC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTTGGGCTTTTGGCAAATaGTTCCAGAGAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFWAFGK*FQRSST
Trigger: GGTGGAGCTTCTCTGGAATCATTTGCCAAAAGCCCA...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACAGAAAAGAAAAACATaGGCTCCATGGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEQKRKT*APWKWS
Trigger: AGACCATTTCCATGGAGCTCATGTTTTTCTTTTCTG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTTTTAAGGCATCCCTCTaGAGGGGCCTGTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFFKASL*RGLSQN
Trigger: ATTCTGAGACAGGCCCCTGCAGAGGGATGCCTTAAA...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATCATGGGTTTCTCCCTaGCCTTCAAGCGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKSWVSP*PSSEMS
Trigger: ACTCATCTCGCTTGAAGGGCAGGGAGAAACCCATGA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACATCTCTGCCCCTATaGACCACGAGAACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKTSLPL*TTRTEV
Trigger: GACTTCAGTTCTCGTGGTCCATAGGGGCAGAGATGT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACTTTGGAACTGGGCATaGAGATCTTTGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKLWNWA*RSLHHK
Trigger: CTTGTGGTGCAAAGATCTTCATGCCCAGTTCCAAAG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAATCACTATTATTTCTATaGGTCCTATGGGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TQATFTLTSLPLWTTRTESLLFL*VLWVPQ
Trigger: TTGAGGAACCCATAGGACTCATAGAAATAATAGTGA...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGTGGACCCTTGGATTCTaGCTTGGGCTTTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQWTLGF*LGLLAN
Trigger: ATTTGCCAAAAGCCCAAGGCAGAATCCAAGGGTCCA...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTATGGACCACGAGAACTaGAGTCCCAAAATAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFMDHEN*SPKIRV
Trigger: AACCCTTATTTTGGGACTTCAGTTCTCGTGGTCCAT...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAACTCGGAACTGGATGTaGCACCAGGAATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKTRNWM*HQEFLT
Trigger: TGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGT...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCCAGGGCCGTTCCTTTaGATCAAAATAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: NSELDVPPGISNIFLEDQPGPFL*IKIGTH
Trigger: ATGAGTACCTATTTTGATGCAAAGGAACGGCCCTGG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAAATGTATTCAGAGTGTaGCTTTCTCTGCCTCACACG +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKNVFRV*LSLPHT
Trigger: CGTGTGAGGCAGAGAAAGCCACACTCTGAATACATT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTTTACTGGTTGTGATGTaGCCAACACATTACACCCTT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFLLVVM*PTHYTL
Trigger: AAGGGTGTAATGTGTTGGTCACATCACAACCAGTAA...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTTGGGTGTATCTATTGTaGAATTTGGTGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFWVYLL*NLVGGV
Trigger: AACACCACCCACCAAATTGCACAATAGATACACCCA...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR GCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAATGACAATGCATAGTTaGTCAGTAGTGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKMTMHS*SVVPPF
Trigger: GAAAGGAGGCACTACTGAGCAACTATGCATTGTCAT...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATATGCATCCAAGTTCTaGTACAAAGGTCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKYASKF*YKGLRN
Trigger: ATTCCGGAGACCTTTGTACCAGAACTTGGATGCATA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR TCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAACAGAAAAGAAAAACATaGGCTCCATGGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKQKRKT*APWKWS
Trigger: AGACCATTTCCATGGAGCTCATGTTTTTCTTTTCTG...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CCA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAGAAATAGACGCAGTCTaGGAAAACATTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKEIDAV*ENILHV
Trigger: AACATGCAGAATGTTTTCCCAGACTGCGTCTATTTC...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp GCCGCGGCGCCCTCCCTGCGCTCCGCCGGGGCGGGCGCCGGCGCTTaGTGGTTGAGGTCCGCTAGGATCCGCGCCACCACGAAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: AAAPSLRSAGAGAGA*WLRSARIRATTKSE
Trigger: CTCGCTCTTCGTGGTGGCGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGCCCCGGCGGAGCGCAGGGAGGGCGCCGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS CCA 90 bp GCGGCGCCCTCCCTGCGCTCCGCCGGGGCGGGCGCCGGCGCTTGCTaGTTGAGGTCCGCTAGGATCCGCGCCACCACGAAGAGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: AAPSLRSAGAGAGAC*LRSARIRATTKSEA
Trigger: CGCCTCGCTCTTCGTGGTGGCGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGCCCCGGCGGAGCGCAGGGAGGGCGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS TCA 90 bp CGCCCTCCCTGCGCTCCGCCGGGGCGGGCGCCGGCGCTTGCTGGTTaGGGTCCGCTAGGATCCGCGCCACCACGAAGAGCGAGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: RPPCAPPGRAPALAG*GPLGSAPPRRARRC
Trigger: ACAGCGCCTCGCTCTTCGTGGTGGCGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGCCCCGGCGGAGCGCAGGGAGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CAA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCCCCGCCGGACCCTTaGTCTGAGGCCGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGAPPDP*SEAGLA
Trigger: GGCGAGCCCGGCCTCAGACAAAGGGTCCGGCGGGGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CAA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGCCGGCGCTTGCTGGTaGAGGTCCGCTAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGAGACW*RSARIR
Trigger: GCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CAA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGCCCCGCCGGACCCTTaGTCTGAGGCCGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPAPPDP*SEAGLA
Trigger: GGCGAGCCCGGCCTCAGACAAAGGGTCCGGCGGGGC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS CCA 90 bp GAGGCTCTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTATGGTaGGGCTGGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: EALPGCGRSPSRRVW*GWSERCCTVVERGS
Trigger: AGAGCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp TTGGAGGCTCTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTATaGTGGGGCTGGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: LEALPGCGRSPSRRV*WGWSERCCTVVERG
Trigger: GCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAGAGCCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp CTGTGGGTTCTCCTTGGAAAGGGCTCGCGCGCCCGCCTCCAGGCTTaGAGGCTCTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTAT +
Preference number: 5 (lower is better)
Translates to: LWVLLGKGSRARLQA*RLSQAAVGLRPGGY
Trigger: ATACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAGAGCCTCCAAGCCTGGAGGCGGGCGCGCGAGCCCTTTCCAAGGAGAACCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp CTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTATGGTGGGGCTaGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGCTCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: LPGCGRSPSRRVWWG*SERCCTVVERGSAL
Trigger: CAAAGCAGAGCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp CTAGAGGCCCCTGGAGCAAGAGGGGAAGCCGCTGTGGGTTCTCCTTaGAAAGGGCTCGCGCGCCCGCCTCCAGGCTTGGAGGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: LEAPGARGEAAVGSP*KGLARPPPGLEALP
Trigger: TGGGAGAGCCTCCAAGCCTGGAGGCGGGCGCGCGAGCCCTTTCCAAGGAGAACCCACAGCGGCTTCCCCTCTTGCTCCAGGGGCCTCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGGAGCGCGCGAACTTCTaGTTGCAGTCCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGERANF*LQSCQL
Trigger: CAGCTGGCAGGACTGCAACAAGAAGTTCGCGCGCTC...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000560473.1
ENST00000616962.1
ENST00000621843.1
CDS-3UTR CAA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCAGCCCCGCCGGACCCTTaGTCTGAGGCCGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAAPPDP*SEAGLA
Trigger: GGCGAGCCCGGCCTCAGACAAAGGGTCCGGCGGGGC...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCAGAGCGCGCGAACTTCTaGTTGCAGTCCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPERANF*LQSCQL
Trigger: CAGCTGGCAGGACTGCAACAAGAAGTTCGCGCGCTC...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCTCCCTGGAGAGCACTTaGCCAGCCTCCCAGGGACGG +
Preference number: 5 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPSLEST*PASQGR
Trigger: CCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGA...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp GAAAGGCCAGGGACTCACGAGGGGGTGGGAGCGGCTGCTCATGGCTGTGGCGGGAGGAGTGAGGCGATCTaGCACTCGAGTGTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: ERPGTHEGVGAAAHGCGGRSEAI*HSSVVG
Trigger: ACCCACGACACTCGAGTGCAAGATCGCCTCACTCCT...CCCGCCACAGCCATGAGCAGCCGCTCCCACCCCCTCGTGAGTCCCTGGCCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp AAAGGGGCTCTGCTTTGCAGGTGGAGCCGGCAGAACTTGCCTCCATaGTCTCCAGGCGTAGCGGACCTGGCTGGAGCCGGACAGTGCACC +
Preference number: 5 (lower is better)
Translates to: KGALLCRWSRQNLPP*SPGVADLAGAGQCT
Trigger: GGTGCACTGTCCGGCTCCAGCCAGGTCCGCTACGCCTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 90 bp GTGGGGCTGGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGCTCTaGTTTGCAGGTGGAGCCGGCAGAACTTGCCTCCATGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VGLERAVLHSRGKGL*FAGGAGRTCLHALQ
Trigger: CTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCCGGCGGCGGTGCTCTaGCTGCGAGTCGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQPAAVL*LRVVSR
Trigger: GCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCGG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp GCTGGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGCTCTGCTTTaGAGGTGGAGCCGGCAGAACTTGCCTCCATGCTCTCCAGGCGTA +
Preference number: 5 (lower is better)
Translates to: AGASGAAQSWKGALL*RWSRQNLPPCSPGV
Trigger: TACGCCTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp CGATGCCTGGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTGGTCTTaGAGCACCGAAGCGGCTGCAGCTGCGACCGCAGAGCACAGCGGG +
Preference number: 5 (lower is better)
Translates to: RCLAGKALSLLPLWS*STEAAAAATAEHSG
Trigger: CCCGCTGTGCTCTGCGGTCGCAGCTGCAGCCGCTTCGGTGCTCCAAGACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500533.3
ENST00000558225.1
CDS-3UTR CAA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCTCAGAATCAGCTGCGTaGCAAGCCCAGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPSESAA*QAQPGS
Trigger: CGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGA...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGCCCTACCCCCATTTCCCAGTCCAGGCCGGGGCCTAAGGACCGCACCCTGCCACATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACT +
Preference number: 5 (lower is better)
Translates to: CPTPISQSRPGPKDRTLPHLQRS*LDHGLT
Trigger: AGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATG...TGGCAGGGTGCGGTCCTTAGGCCCCGGCCTGGACTGGGAAATGGGGGTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp AGCTCTGTCTTTGCTTCCTCTCTGGTCTTGGAGCACCGAAGCGGCTaGAGCTGCGACCGCAGAGCACAGCGGGGGTTGAGCCTGAACGCT +
Preference number: 5 (lower is better)
Translates to: SSVFASSLVLEHRSG*SCDRRAQRGLSLNA
Trigger: AGCGTTCAGGCTCAACCCCCGCTGTGCTCTGCGGTCGCAGCTGCAGCCGCTTCGGTGCTCCAAGACCAGAGAGGAAGCAAAGACAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp AAGCAGCGATGCCTGGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTaGTCTTGGAGCACCGAAGCGGCTGCAGCTGCGACCGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: KQRCLAGKALSLLPL*SWSTEAAAAATAEH
Trigger: GTGCTCTGCGGTCGCAGCTGCAGCCGCTTCGGTGCTCCAAGACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500533.3
ENST00000558225.1
CDS-3UTR CAA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCCAGCTTCGCCGCGCATaGTGGCAGGCGGGACAGCTG +
Preference number: 5 (lower is better)
Translates to: CLKKMEAVSGGSALCARLQLRRA*WQAGQL
Trigger: CAGCTGTCCCGCCTGCCACAATGCGCGGCGAAGCTG...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307145.4
CDS-3UTR CAA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCGGGAGGGACCTCACTTaGGAACTGGGCATGAAGATC +
Preference number: 5 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPGRDLT*ELGMKI
Trigger: GATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCC...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCCACACGAAAACAACTTaGGGAGGGACCTCACTTTGG +
Preference number: 5 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLHTKTT*GGTSLW
Trigger: CCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTG...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGTCAGGAGGGTCCGCCTaGTGTGCCCGCCTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQSGGSA*CARLSG
Trigger: TCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGA...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp AGGGGTCCTCTCCCTGACAAGGACAGAGCCATCCCACAGACGAACTaGCTTAGTGCAGCTGGCGCTCCAGTCCGGGATCACTTACAACCA +
Preference number: 5 (lower is better)
Translates to: RGPLPDKDRAIPQTN*LSAAGAPVRDHLQP
Trigger: TGGTTGTAAGTGATCCCGGACTGGAGCGCCAGCTGCACTAAGGCAGTTCGTCTGTGGGATGGCTCTGTCCTTGTCAGGGAGAGGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 90 bp CTTTCAGCACAGGATCGGAAGGTCTGGGGGTGGAGACACATCCTTTaGCCGCCACAGACACTGGAGGGCGTGTCGACATTGCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: LSAQDRKVWGWRHIL*PPQTLEGVSTLPAD
Trigger: ATCTGCAGGCAATGTCGACACGCCCTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCCAGACCTTCCGATCCTGTGCTGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CCA 90 bp CTGGAGGGCGTGTCGACATTGCCTGCAGATGTCCAGGAAAGAGCTTaGACCCTAGGGGGCGGAAAACCGTGGGTCTGTGACCTTGACAAG +
Preference number: 5 (lower is better)
Translates to: LEGVSTLPADVQERA*TLGGGKPWVCDLDK
Trigger: CTTGTCAAGGTCACAGACCCACGGTTTTCCGCCCCCTAGGGTCCAAGCTCTTTCCTGGACATCTGCAGGCAATGTCGACACGCCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CCA 90 bp GGAAGGTCTGGGGGTGGAGACACATCCTTTGCCCGCCACAGACACTaGAGGGCGTGTCGACATTGCCTGCAGATGTCCAGGAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GRSGGGDTSFARHRH*RACRHCLQMSRKEL
Trigger: AAGCTCTTTCCTGGACATCTGCAGGCAATGTCGACACGCCCTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCCAGACCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS-3UTR CAA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCATCAGAATCAGCTGCGTaGCAAGCCCAGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: SVPVHSGASQNSDHQLWASESAA*QAQPGS
Trigger: CGAGCCTGGCTGGGCTTGCAACGCAGCTGATTCTGA...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGGTGCGCTGCCACATGCACAGCCGCTCACACAGACCCTCTGATGAGGAGGCCCCCCAGGGCCGTTCCTTaGCATCAAAATAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: WCAATCTAAHTDPLMRRPPRAVP*HQNRYS
Trigger: TGAGTACCTATTTTGATGCAAAGGAACGGCCCTGGG...GGGCCTCCTCATCAGAGGGTCTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp CGTCTGACCCCTCCCTGGAGAGCACTTTGCCAGCCTCCCAGGGACGGGCCACTCTTCTGCCTTGGGCTTTaGGCAAATGATTCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: RLTPPWRALCQPPRDGPLFCLGL*ANDSRE
Trigger: TTCTCTGGAATCATTTGCCAAAAGCCCAAGGCAGAA...GAGTGGCCCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGAGGGGTCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGCCGGCGCTTGCTGGTaGAGGTCCGCTAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEAGACW*RSARIR
Trigger: GCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCAGTGCCTCAGATGTTaGTACCCGGAGGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQQCLRC*YPEAAP
Trigger: TGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGTTTGAAGAAAATGGAGGCTGTTTCAGGAGGGTCCGCCTTGTGTGCCCGCCTCGATCACATCTTCCTGTaGGGTGGCACCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: CLKKMEAVSGGSALCARLDHIFL*GGTPAQ
Trigger: CTGGGCAGGGGTGCCACCCAACAGGAAGATGTGATC...GAGGCGGGCACACAAGGCGGACCCTCCTGAAACAGCCTCCATTTTCTTCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS TCA 90 bp TACTGCACACCCCATCAGACAGAATTGGTCCAGGTAGCCACACGCTaGGCTTCAAGGCCAAAGCAGCGATGCCTGGCTGGGAAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: YCTPHQTELVQVATR*ASRPKQRCLAGKAL
Trigger: CAGAGCTTTCCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGCTCAGCGTGTGGCTACCTGGACCAATTCTGTCTGATGGGGTGTGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 90 bp CCAGGGAGTTCGGAGAGGAGAGGGAAGCAAACGGGGTGTTCAGTCTaGTCTGTGGGCACCTATGCCGACCTGCTTAGTTACCACTGTACT +
Preference number: 5 (lower is better)
Translates to: PGSSERRGKQTGCSV*SVGTYADLLSYHCT
Trigger: AGTACAGTGGTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACCCCGTTTGCTTCCCTCTCCTCTCCGAACTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATTGCTGGACCACGGCTaGACTGACCCCCGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSLLDHG*TDPRPG
Trigger: CCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACATCTGCAGAGGAGTTaGCTGGACCACGGCTTGACT +
Preference number: 5 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAHLQRS*LDHGLT
Trigger: AGTCAAGCCGTGGTCCAGCAAACTCCTCTGCAGATG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGAGGAGTGAGGCGATCTaGCACTCGAGTGTCGTGGGT +
Preference number: 5 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSERSEAI*HSSVVG
Trigger: ACCCACGACACTCGAGTGCAAGATCGCCTCACTCCT...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp ATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAAACCGGCGGCGGTGCTCTaGCTGCGAGTCGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: MLPFHLSDGTALGHLKEKPAAVL*LRVVSR
Trigger: GCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCGG...TTTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp CTGCTGAGTGCATGGCCTGGCAGGCATTCGGCTCACACACCTGGTTTCCAAATAGGGAGGGACCTCACTTaGGAACTGGGCATGAAGATC +
Preference number: 5 (lower is better)
Translates to: LLSAWPGRHSAHTPGFQIGRDLT*ELGMKI
Trigger: GATCTTCATGCCCAGTTCCAAAGTGAGGTCCCTCCC...TATTTGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGCACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCATCCCTGGAGAGCACTTaGCCAGCCTCCCAGGGACGG +
Preference number: 5 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSSLEST*PASQGR
Trigger: CCGTCCCTGGGAGGCTGGCAAAGTGCTCTCCAGGGA...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGATCACATCTTCCTGTaGGGTGGCACCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSDHIFL*GGTPAQ
Trigger: CTGGGCAGGGGTGCCACCCAACAGGAAGATGTGATC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp GCACCTATGCCGACCTGCTTAGTTACCACTGTACTTGTGGTAACATaGCAGTGTGTAGGAGGGGTCCTCTCCCTGACAAGGACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: APMPTCLVTTVLVVT*QCVGGVLSLTRTEP
Trigger: TGGCTCTGTCCTTGTCAGGGAGAGGACCCCTCCTACACACTGGCATGTTACCACAAGTACAGTGGTAACTAAGCAGGTCGGCATAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp GTTCGGAGAGGAGAGGGAAGCAAACGGGGTGTTCAGTCTGCTCTGTaGGCACCTATGCCGACCTGCTTAGTTACCACTGTACTTGTGGTA +
Preference number: 5 (lower is better)
Translates to: VRRGEGSKRGVQSAL*APMPTCLVTTVLVV
Trigger: TACCACAAGTACAGTGGTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACCCCGTTTGCTTCCCTCTCCTCTCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp AGAATGGTCTCTGTGAAGCATGGTGCGCTGCCACATGCACAGCCGCTCACACAGCCCAGGGCCGTTCCTTaGCATCAAAATAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: RMVSVKHGALPHAQPLTQPRAVP*HQNRYS
Trigger: TGAGTACCTATTTTGATGCAAAGGAACGGCCCTGGG...CTGTGTGAGCGGCTGTGCATGTGGCAGCGCACCATGCTTCACAGAGACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCAGGCAACCTTCACTTaGACATCTCTGCCCCTATGG +
Preference number: 5 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEQATFT*TSLPLW
Trigger: CCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCACAATGTTCCGGTCTCTaGCTACAGAATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SVPVHSGASQNSDHQLWAQCSGL*LQNGLC
Trigger: ACAGAGACCATTCTGTAGCAAGAGACCGGAACATTG...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTGGAGAGGCTGGAGGTTaGCTAAGTCTGAGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSGEAGG*LSLSWG
Trigger: TCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCC...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTTTGCTGGACCACGGCTaGACTGACCCCCGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFLLDHG*TDPRPG
Trigger: CCCTGGGCGGGGGTCAGTCAAGCCGTGGTCCAGCAA...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 90 bp AGCAAACGGGGTGTTCAGTCTGCTCTGTGGGCACCTATGCCGACCTaGTTAGTTACCACTGTACTTGTGGTAACATGCCAGTGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: SKRGVQSALWAPMPT*LVTTVLVVTCQCVG
Trigger: TCCTACACACTGGCATGTTACCACAAGTACAGTGGTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACCCCGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 90 bp CTTCCTTGTCTTCTTTGTCACCTTCAAGGCCAAAGCAGCGATGCCTaGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTGGTCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LPCLLCHLQGQSSDA*LGKLCLCFLSGLGA
Trigger: TGCTCCAAGACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGGTGACAAAGAAGACAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558225.1
CDS-3UTR CAA 90 bp AGCGTACCTGTCCACTCTGGAGCCAGCCAAAACAGTGACCATCAGCTGTGGGCATTGTGGGTGTATCTATaGTGCAATTTGGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SVPVHSGASQNSDHQLWALWVYL*CNLVGG
Trigger: ACCACCCACCAAATTGCACAATAGATACACCCACAA...TGCCCACAGCTGATGGTCACTGTTTTGGCTGGCTCCAGAGTGGACAGGTACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGCAATGTTCCGGTCTCTaGCTACAGAATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSEQCSGL*LQNGLC
Trigger: ACAGAGACCATTCTGTAGCAAGAGACCGGAACATTG...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAAGGAGAGGCTGGAGGTTaGCTAAGTCTGAGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEGEAGG*LSLSWG
Trigger: TCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCC...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TTCAAGCGAGATGAGTTTAAGCCGCAGATGATTCAGGAGGGTCTGGCCAGGAGTCTCTGTCCTGGGCCCTaGTATTTACAGGCCTCAACT +
Preference number: 5 (lower is better)
Translates to: FKRDEFKPQMIQEGLARSLCPGP*YLQAST
Trigger: AGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAG...ACTCCTGGCCAGACCCTCCTGAATCATCTGCGGCTTAAACTCATCTCGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCATTTAAAGGAAAATCAGGAGGGTCCGCCTaGTGTGCCCGCCTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: NVTLPSIRRNSPGSFKGKSGGSA*CARLSG
Trigger: TCCACTGAGGCGGGCACACAAGGCGGACCCTCCTGA...TTTTCCTTTAAATGACCCAGGGCTGTTCCGTCTGATAGATGGAAGGGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS TCA 90 bp AATGTGGGAGGCAGGAAGTCTAGATCTGTTACAGGGGCTACACTGTaGTGGGGACTCGGGCTCCATCTATCCAGTGCTCATTATCCTTGT +
Preference number: 5 (lower is better)
Translates to: NVGGRKSRSVTGATL*WGLGLHLSSAHYPC
Trigger: ACAAGGATAATGAGCACTGGATAGATGGAGCCCGAGTCCCCATCACAGTGTAGCCCCTGTAACAGATCTAGACTTCCTGCCTCCCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp AACGGAGAGGCTGGAGGTTTGCTAAGTCTGAGTTGGGGACATGGTGGGTCTGAGTTGTGGGTGTATCTATaGTGCAATTTGGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: NGEAGGLLSLSWGHGGSELWVYL*CNLVGG
Trigger: ACCACCCACCAAATTGCACAATAGATACACCCACAA...CTCAGACCCACCATGTCCCCAACTCAGACTTAGCAAACCTCCAGCCTCTCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp TGCATCCAAGTTCTGGTACAAAGGTCTCCGGAATGTGTCTCAGACAAGCCTTCACTCTGTCCTGGGCCCTaGTATTTACAGGCCTCAACT +
Preference number: 5 (lower is better)
Translates to: CIQVLVQRSPECVSDKPSLCPGP*YLQAST
Trigger: AGTTGAGGCCTGTAAATACAAGGGCCCAGGACAGAG...TGAAGGCTTGTCTGAGACACATTCCGGAGACCTTTGTACCAGAACTTGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp ACTCAGGCAACCTTCACTTTGACATCTCTGCCCCTATGGACCACGAGAACTGAACACACGAAAACAACTTaGGGAGGGACCTCACTTTGG +
Preference number: 5 (lower is better)
Translates to: TQATFTLTSLPLWTTRTEHTKTT*GGTSLW
Trigger: CCAAAGTGAGGTCCCTCCCAAAGTTGTTTTCGTGTG...TTCAGTTCTCGTGGTCCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AACTCGGAACTGGATGTGCCACCAGGAATTTCTAACATCTTTTTAGAAGACCAGCAGTGCCTCAGATGTTaGTACCCGGAGGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: NSELDVPPGISNIFLEDQQCLRC*YPEAAP
Trigger: TGGTGCAGCCTCCGGGTACAAACATCTGAGGCACTG...CTGGTCTTCTAAAAAGATGTTAGAAATTCCTGGTGGCACATCCAGTTCCGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS-3UTR CAA 90 bp AATGTTCCGGTCTCTTGCTACAGAATGGTCTCTGTGAAGCATGGTGCGCTGCCATTCTGCCTTGGGCTTTaGGCAAATGATTCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: NVPVSCYRMVSVKHGALPFCLGL*ANDSRE
Trigger: TTCTCTGGAATCATTTGCCAAAAGCCCAAGGCAGAA...TGGCAGCGCACCATGCTTCACAGAGACCATTCTGTAGCAAGAGACCGGAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS CCA 90 bp GCCTTAGTGCAGCTGGCGCTCCAGTCCGGGATCACTTACAACCACTaGCTAACCTTTTTCATGAGAAACATAATTGGCTGTAAACTCTCT +
Preference number: 5 (lower is better)
Translates to: ALVQLALQSGITYNH*LTFFMRNIIGCKLS
Trigger: AGAGAGTTTACAGCCAATTATGTTTCTCATGAAAAAGGTTAGCCAGTGGTTGTAAGTGATCCCGGACTGGAGCGCCAGCTGCACTAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS-3UTR CAA 90 bp GGGGGTTCAACAACGCTGAATCTCAACTTTGTGGGTGTATCTATTGTGCAATTTCAGGCAACCTTCACTTaGACATCTCTGCCCCTATGG +
Preference number: 5 (lower is better)
Translates to: GGSTTLNLNFVGVSIVQFQATFT*TSLPLW
Trigger: CCATAGGGGCAGAGATGTCAAAGTGAAGGTTGCCTG...AAATTGCACAATAGATACACCCACAAAGTTGAGATTCAGCGTTGTTGAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS CCA 90 bp CAGAGTGCTGATTGGTCTGATTGGTCCATTTTACAGAGCACTAATTaGTCCATTTTACAGTGTTCTGATTGGTCCACTTTACAAAGCACT +
Preference number: 5 (lower is better)
Translates to: QSADWSDWSILQSTN*SILQCSDWSTLQST
Trigger: AGTGCTTTGTAAAGTGGACCAATCAGAACACTGTAAAATGGACCAATTAGTGCTCTGTAAAATGGACCAATCAGACCAATCAGCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 72 bp CTCGAGGTCGGCGCGACTTCGGCCCCGCCGGACCCTTaGTCTGAGGCCGGGCTCGCCGCTCCCCGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: LEVGATSAPPDP*SEAGLAAPRGP
Trigger: GGGCCCGCGGGGAGCGGCGAGCCCGGCCTCAGACAAAGGGTCCGGCGGGGCCGAAGTCGCGCCGACCTCGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307145.4
ENST00000558921.1
ENST00000616962.1
ENST00000621843.1
CDS CAA 90 bp GCGCCCTCCCTGCGCTCCGCCGGGGCGGGCGCCGGCGCTTGCTGGTaGAGGTCCGCTAGGATCCGCGCCACCACGAAGAGCGAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: APSLRSAGAGAGACW*RSARIRATTKSEAL
Trigger: CAGCGCCTCGCTCTTCGTGGTGGCGCGGATCCTAGCGGACCTCAACCAGCAAGCGCCGGCGCCCGCCCCGGCGGAGCGCAGGGAGGGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307145.4
ENST00000616962.1
ENST00000621843.1
CDS CCA 72 bp CTCGCCAAGTCGCGGCCGCAGCTTCGCCGCGCATTGTaGCAGGCGGGACAGCTGCCGTGCGCGCCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: LAKSRPQLRRAL*QAGQLPCAPRL
Trigger: GAGCCGCGGCGCGCACGGCAGCTGTCCCGCCTGCCACAATGCGCGGCGAAGCTGCGGCCGCGACTTGGCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307145.4
CDS CAA 72 bp CACCTCGCCAAGTCGCGGCCGCAGCTTCGCCGCGCATaGTGGCAGGCGGGACAGCTGCCGTGCGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: HLAKSRPQLRRA*WQAGQLPCAPR
Trigger: CCGCGGCGCGCACGGCAGCTGTCCCGCCTGCCACAATGCGCGGCGAAGCTGCGGCCGCGACTTGGCGAGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307145.4
CDS GCA 72 bp CATGCTGCGGGCTGGGGCCGGCGGCGGTGCTCTTGCTaGGAGTCGTCAGCCGCGCATCCGCACCCACGGCCT +
Preference number: 6 (lower is better)
Translates to: HAAGWGRRRCSC*ESSAAHPHPRP
Trigger: AGGCCGTGGGTGCGGATGCGCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCGGCCCCAGCCCGCAGCATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS GCA 72 bp TGCCATGCTGCGGGCTGGGGCCGGCGGCGGTGCTCTTaGTGCGAGTCGTCAGCCGCGCATCCGCACCCACGG +
Preference number: 6 (lower is better)
Translates to: CHAAGWGRRRCS*CESSAAHPHPR
Trigger: CCGTGGGTGCGGATGCGCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCGGCCCCAGCCCGCAGCATGGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS CAA 72 bp CTGCCATGCTGCGGGCTGGGGCCGGCGGCGGTGCTCTaGCTGCGAGTCGTCAGCCGCGCATCCGCACCCACG +
Preference number: 6 (lower is better)
Translates to: LPCCGLGPAAVL*LRVVSRASAPT
Trigger: CGTGGGTGCGGATGCGCGGCTGACGACTCGCAGCAAGAGCACCGCCGCCGGCCCCAGCCCGCAGCATGGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307145.4
ENST00000621843.1
CDS CCA 72 bp CTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTATaGTGGGGCTGGAGCGAGCGGTGCTGCACAGTCGTG +
Preference number: 6 (lower is better)
Translates to: LPGCGRSPSRRV*WGWSERCCTVV
Trigger: CACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 90 bp GCTGTGGGTTCTCCTTGGAAAGGGCTCGCGCGCCCGCCTCCAGGCTaGGAGGCTCTCCCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTA +
Preference number: 6 (lower is better)
Translates to: AVGSPWKGLARPPPG*EALPGCGRSPSRRV
Trigger: TACCCGCCTGGACGGAGACCGACCGCAGCCTGGGAGAGCCTCCAAGCCTGGAGGCGGGCGCGCGAGCCCTTTCCAAGGAGAACCCACAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp TGCGGTCGGTCTCCGTCCAGGCGGGTATGGTGGGGCTaGAGCGAGCGGTGCTGCACAGTCGTGGAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: CGRSPSRRVWWG*SERCCTVVERG
Trigger: GCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp CCAGGCTGCGGTCGGTCTCCGTCCAGGCGGGTATGGTaGGGCTGGAGCGAGCGGTGCTGCACAGTCGTGGAA +
Preference number: 6 (lower is better)
Translates to: PGCGRSPSRRVW*GWSERCCTVVE
Trigger: TTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATACCCGCCTGGACGGAGACCGACCGCAGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 90 bp TCTAGAGGCCCCTGGAGCAAGAGGGGAAGCCGCTGTGGGTTCTCCTaGGAAAGGGCTCGCGCGCCCGCCTCCAGGCTTGGAGGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SRGPWSKRGSRCGFS*ERARAPASRLGGSP
Trigger: GGGAGAGCCTCCAAGCCTGGAGGCGGGCGCGCGAGCCCTTTCCAAGGAGAACCCACAGCGGCTTCCCCTCTTGCTCCAGGGGCCTCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 72 bp CCCTGGAGCAAGAGGGGAAGCCGCTGTGGGTTCTCCTaGGAAAGGGCTCGCGCGCCCGCCTCCAGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: PWSKRGSRCGFS*ERARAPASRLG
Trigger: TCCAAGCCTGGAGGCGGGCGCGCGAGCCCTTTCCAAGGAGAACCCACAGCGGCTTCCCCTCTTGCTCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp CTGCTTTGCAGGTGGAGCCGGCAGAACTTGCCTCCATaGTCTCCAGGCGTAGCGGACCTGGCTGGAGCCGGA +
Preference number: 6 (lower is better)
Translates to: LLCRWSRQNLPP*SPGVADLAGAG
Trigger: TCCGGCTCCAGCCAGGTCCGCTACGCCTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp TATGGTGGGGCTGGAGCGAGCGGTGCTGCACAGTCGTaGAAAGGGGCTCTGCTTTGCAGGTGGAGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: YGGAGASGAAQS*KGALLCRWSRQ
Trigger: CTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTTCCACGACTGTGCAGCACCGCTCGCTCCAGCCCCACCATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 90 bp CAGTCGTGGAAAGGGGCTCTGCTTTGCAGGTGGAGCCGGCAGAACTaGCCTCCATGCTCTCCAGGCGTAGCGGACCTGGCTGGAGCCGGA +
Preference number: 6 (lower is better)
Translates to: QSWKGALLCRWSRQN*PPCSPGVADLAGAG
Trigger: TCCGGCTCCAGCCAGGTCCGCTACGCCTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTTCCACGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp TTTGCTTCCTCTCTGGTCTTGGAGCACCGAAGCGGCTaGAGCTGCGACCGCAGAGCACAGCGGGGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: FASSLVLEHRSG*SCDRRAQRGLS
Trigger: GCTCAACCCCCGCTGTGCTCTGCGGTCGCAGCTGCAGCCGCTTCGGTGCTCCAAGACCAGAGAGGAAGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000500533.3
ENST00000558225.1
CDS CCA 72 bp GGGGGTGGAGACACATCCTTTGCCCGCCACAGACACTaGAGGGCGTGTCGACATTGCCTGCAGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GGGDTSFARHRH*RACRHCLQMSR
Trigger: CCTGGACATCTGCAGGCAATGTCGACACGCCCTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CAA 72 bp AAAGGGGCTCTGCTTTGCAGGTGGAGCCGGCAGAACTaGCCTCCATGCTCTCCAGGCGTAGCGGACCTGGCT +
Preference number: 6 (lower is better)
Translates to: KGALLCRWSRQN*PPCSPGVADLA
Trigger: AGCCAGGTCCGCTACGCCTGGAGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp AGCGGTGCTGCACAGTCGTGGAAAGGGGCTCTGCTTTaGAGGTGGAGCCGGCAGAACTTGCCTCCATGCTCT +
Preference number: 6 (lower is better)
Translates to: SGAAQSWKGALL*RWSRQNLPPCS
Trigger: AGAGCATGGAGGCAAGTTCTGCCGGCTCCACCTGCAAAGCAGAGCCCCTTTCCACGACTGTGCAGCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp TGCCTGGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTaGTCTTGGAGCACCGAAGCGGCTGCAGCTGCGACC +
Preference number: 6 (lower is better)
Translates to: CLAGKALSLLPL*SWSTEAAAAAT
Trigger: GGTCGCAGCTGCAGCCGCTTCGGTGCTCCAAGACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500533.3
ENST00000558225.1
CDS TCA 72 bp CCCCATCAGACAGAATTGGTCCAGGTAGCCACACGCTaGGCTTCAAGGCCAAAGCAGCGATGCCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PHQTELVQVATR*ASRPKQRCLAG
Trigger: CCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGCTCAGCGTGTGGCTACCTGGACCAATTCTGTCTGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp GGGACACTTTCAGCACAGGATCGGAAGGTCTGGGGGTaGAGACACATCCTTTGCCCGCCACAGACACTGGAG +
Preference number: 6 (lower is better)
Translates to: GTLSAQDRKVWG*RHILCPPQTLE
Trigger: CTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCCAGACCTTCCGATCCTGTGCTGAAAGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CAA 72 bp ACAGGATCGGAAGGTCTGGGGGTGGAGACACATCCTTaGCCCGCCACAGACACTGGAGGGCGTGTCGACATT +
Preference number: 6 (lower is better)
Translates to: TGSEGLGVETHP*PATDTGGRVDI
Trigger: AATGTCGACACGCCCTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCCAGACCTTCCGATCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CAA 90 bp ACTTTCAGCACAGGATCGGAAGGTCTGGGGGTGGAGACACATCCTTaGCCCGCCACAGACACTGGAGGGCGTGTCGACATTGCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: TFSTGSEGLGVETHP*PATDTGGRVDIACR
Trigger: TCTGCAGGCAATGTCGACACGCCCTCCAGTGTCTGTGGCGGGCAAAGGATGTGTCTCCACCCCCAGACCTTCCGATCCTGTGCTGAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS CCA 72 bp GTGTCGACATTGCCTGCAGATGTCCAGGAAAGAGCTTaGACCCTAGGGGGCGGAAAACCGTGGGTCTGTGAC +
Preference number: 6 (lower is better)
Translates to: VSTLPADVQERA*TLGGGKPWVCD
Trigger: GTCACAGACCCACGGTTTTCCGCCCCCTAGGGTCCAAGCTCTTTCCTGGACATCTGCAGGCAATGTCGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558225.1
ENST00000558921.1
CDS TCA 72 bp AGTTCTCCAAGTCCCCGCCCCACCCAGAAGTCCAGCTaGCTTCACCACTCATTTCCAGCTGGTAGAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SSPSPRPTQKSS*LHHSFPAGRGS
Trigger: GCTACCTCTACCAGCTGGAAATGAGTGGTGAAGTCAGCTGGACTTCTGGGTGGGGCGGGGACTTGGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp TCGGAGAGGAGAGGGAAGCAAACGGGGTGTTCAGTCTaGTCTGTGGGCACCTATGCCGACCTGCTTAGTTAC +
Preference number: 6 (lower is better)
Translates to: SERRGKQTGCSV*SVGTYADLLSY
Trigger: GTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACCCCGTTTGCTTCCCTCTCCTCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp TGTGCCCCACTCTCCTTCTCACCTCTGCTTGGCTTATaGTACTTGGCCATGTCCAGGGAGTTCGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: CAPLSFSPLLGL*YLAMSREFGEE
Trigger: CTCCTCTCCGAACTCCCTGGACATGGCCAAGTAGCATAAGCCAAGCAGAGGTGAGAAGGAGAGTGGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp CCTTCTACCCTTCTCCCTGCCACATACATTCACTCCTaGACACTTACGGGGCTCCAGTGCCCTCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: PSTLLPATYIHS*TLTGLQCPLLW
Trigger: CCAAAGCAGAGGGCACTGGAGCCCCGTAAGTGTGCAGGAGTGAATGTATGTGGCAGGGAGAAGGGTAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp CCACACGCTGAGCTTCAAGGCCAAAGCAGCGATGCCTaGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: PHAELQGQSSDA*LGKLCLCFLSG
Trigger: ACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGCTCAGCGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp CAAATACACCACAACAGGGATGGGGACCCAGTGGGTTaGCTGCTGCTGACTGGAGGGTGGCCAGCTTTTATT +
Preference number: 6 (lower is better)
Translates to: QIHHNRDGDPVG*LLLTGGWPAFI
Trigger: AATAAAAGCTGGCCACCCTCCAGTCAGCAGCAGGCAACCCACTGGGTCCCCATCCCTGTTGTGGTGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp GGAGAGGGAAGCAAACGGGGTGTTCAGTCTGCTCTGTaGGCACCTATGCCGACCTGCTTAGTTACCACTGTA +
Preference number: 6 (lower is better)
Translates to: GEGSKRGVQSAL*APMPTCLVTTV
Trigger: TACAGTGGTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACCCCGTTTGCTTCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp GCCAAGAGCAAAATAACAAATACACCACAACAGGGATaGGGACCCAGTGGGTTGCCTGCTGCTGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: AKSKITNTPQQG*GPSGLPAADWR
Trigger: CCTCCAGTCAGCAGCAGGCAACCCACTGGGTCCCCATCCCTGTTGTGGTGTATTTGTTATTTTGCTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp GGTGTTCAGTCTGCTCTGTGGGCACCTATGCCGACCTaGTTAGTTACCACTGTACTTGTGGTAACATGCCAG +
Preference number: 6 (lower is better)
Translates to: GVQSALWAPMPT*LVTTVLVVTCQ
Trigger: CTGGCATGTTACCACAAGTACAGTGGTAACTAAGCAGGTCGGCATAGGTGCCCACAGAGCAGACTGAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp CTTCTTTGTCACCTTCAAGGCCAAAGCAGCGATGCCTaGCTGGGAAAGCTCTGTCTTTGCTTCCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LLCHLQGQSSDA*LGKLCLCFLSG
Trigger: ACCAGAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGGTGACAAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558225.1
CDS GCA 72 bp TTGTCTTCTTTGTCACCTTCAAGGCCAAAGCAGCGATaGCTGGCTGGGAAAGCTCTGTCTTTGCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LSSLSPSRPKQR*LAGKALSLLPL
Trigger: GAGAGGAAGCAAAGACAGAGCTTTCCCAGCCAGGCATCGCTGCTTTGGCCTTGAAGGTGACAAAGAAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558225.1
CDS CCA 72 bp CAGCTGGCGCTCCAGTCCGGGATCACTTACAACCACTaGCTAACCTTTTTCATGAGAAACATAATTGGCTGT +
Preference number: 6 (lower is better)
Translates to: QLALQSGITYNH*LTFFMRNIIGC
Trigger: ACAGCCAATTATGTTTCTCATGAAAAAGGTTAGCCAGTGGTTGTAAGTGATCCCGGACTGGAGCGCCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp TACACTGTGATGGGGACTCGGGCTCCATCTATCCAGTaGTCATTATCCTTGTGTGGCTTTAAATACCCTTGT +
Preference number: 6 (lower is better)
Translates to: YTVMGTRAPSIQ*SLSLCGFKYPC
Trigger: ACAAGGGTATTTAAAGCCACACAAGGATAATGAGCACTGGATAGATGGAGCCCGAGTCCCCATCACAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS GCA 72 bp ACATACATTCACTCCTGCACACTTACGGGGCTCCAGTaGCCTCTGCTTTGGTTTATAAACCAACACCATCAT +
Preference number: 6 (lower is better)
Translates to: TYIHSCTLTGLQ*PLLWFINQHHH
Trigger: ATGATGGTGTTGGTTTATAAACCAAAGCAGAGGGCACTGGAGCCCCGTAAGTGTGCAGGAGTGAATGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 72 bp CCACACTTCAGCCAGCAGGAAGAGAAAGAAGGAGAATaGGCTCATCCACTCATTTACAAGTTACTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PHFSQQEEKEGE*AHPLIYKLLPG
Trigger: CCCAGGAAGTAACTTGTAAATGAGTGGATGAGCCAATTCTCCTTCTTTCTCTTCCTGCTGGCTGAAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 72 bp GGGACTCGGGCTCCATCTATCCAGTGCTCATTATCCTaGTGTGGCTTTAAATACCCTTGTGTGACTTCCATT +
Preference number: 6 (lower is better)
Translates to: GTRAPSIQCSLS*CGFKYPCVTSI
Trigger: AATGGAAGTCACACAAGGGTATTTAAAGCCACACAAGGATAATGAGCACTGGATAGATGGAGCCCGAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CAA 90 bp CCATCATGTCCACACTTCAGCCAGCAGGAAGAGAAAGAAGGAGAATaGGCTCATCCACTCATTTACAAGTTACTTCCTGGGATAGAAGTA +
Preference number: 6 (lower is better)
Translates to: PSCPHFSQQEEKEGE*AHPLIYKLLPGIEV
Trigger: TACTTCTATCCCAGGAAGTAACTTGTAAATGAGTGGATGAGCCAATTCTCCTTCTTTCTCTTCCTGCTGGCTGAAGTGTGGACATGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp TGTCCTGCTGATTGGTCCATTTTACAGAGTGCTGATTaGTCTGATTGGTCCATTTTACAGAGCACTAATTGG +
Preference number: 6 (lower is better)
Translates to: CPADWSILQSAD*SDWSILQSTNW
Trigger: CCAATTAGTGCTCTGTAAAATGGACCAATCAGACCAATCAGCACTCTGTAAAATGGACCAATCAGCAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3
CDS CCA 72 bp CAGAGCACTAATTGGTCCATTTTACAGTGTTCTGATTaGTCCACTTTACAAAGCACTGATTGGTCCATTTTA +
Preference number: 6 (lower is better)
Translates to: QSTNWSILQCSD*STLQSTDWSIL
Trigger: TAAAATGGACCAATCAGTGCTTTGTAAAGTGGACCAATCAGAACACTGTAAAATGGACCAATTAGTGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500533.3