RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLF11 (Homo sapiens)

Ensembl gene IDs: ENSG00000172059

Ensembl transcript IDs: ENST00000305883.6, ENST00000401510.5, ENST00000440320.5, ENST00000448523.5, ENST00000535335.1, ENST00000540845.5

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGAGTTTCATCCA +
Preference number: 1 (lower is better)
Translates to: LANKGSGILALPAFT*ISPQLSCALVEFHP
Trigger: TGGATGAAACTCCACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 90 bp GAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTaGTCCCTGGGATCTGCCCAGTGGCTCATGTTACTCTCTGGGGTA +
Preference number: 1 (lower is better)
Translates to: EPWPRLLQTRSCSKY*SLGSAQWLMLLSGV
Trigger: TACCCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 90 bp GGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCATGTTACTCTCTGGGGTACATCCTT +
Preference number: 1 (lower is better)
Translates to: GQDYYRLDPAASTGP*DLPSGSCYSLGYIL
Trigger: AAGGATGTACCCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTaGAGCAAGTACTGGTCCCTGGGATCTGCCCAGTGGCTCATGTTA +
Preference number: 1 (lower is better)
Translates to: LLSAEPWPRLLQTRS*SKYWSLGSAQWLML
Trigger: TAACATGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR GCA 90 bp TTTCTAGTATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGA +
Preference number: 1 (lower is better)
Translates to: FLVFGKQRKRNLGTA*LHMHLAPAKLCSGG
Trigger: TCCACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAATACTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 90 bp AGGAGAAAGGACTGGGTGGTGAGGAAACATGAACTATGCACAACATaGGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTATGG +
Preference number: 1 (lower is better)
Translates to: RRKDWVVRKHELCTT*DNCAVSRRHDTHLW
Trigger: CCATAGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 90 bp GCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAACATaGACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACA +
Preference number: 1 (lower is better)
Translates to: ADFDEQEKGLGGEET*TMHNMRQLCCLTKT
Trigger: TGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 90 bp TTAGGTACAAACAAGAAACTGAATGGCTTGCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCC +
Preference number: 1 (lower is better)
Translates to: LGTNKKLNGLLSAEP*PRLLQTRSCSKYWS
Trigger: GGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTTGTACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 90 bp ATTCCATTGCCTGAACTTCCAATGTTTAACAAAAACCAGTATCAGTaGCTTCTTGAACACAGGTGGCCACATTCTCTCGGTTATCTACGT +
Preference number: 1 (lower is better)
Translates to: IPLPELPMFNKNQYQ*LLEHRWPHSLGYLR
Trigger: ACGTAGATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTTGTTAAACATTGGAAGTTCAGGCAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 90 bp AACATGTATCTCCTCTTTAGAAATATCACTGCTTGGAGAATGTTGTaGCAAGCAACCAAATACTCAAAAGACCTTATCCACCAGAATACT +
Preference number: 1 (lower is better)
Translates to: NMYLLFRNITAWRML*QATKYSKDLIHQNT
Trigger: AGTATTCTGGTGGATAAGGTCTTTTGAGTATTTGGTTGCTTGTCACAACATTCTCCAAGCAGTGATATTTCTAAAGAGGAGATACATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR GCA 90 bp TACCAAATTAGTGCAACATTCTGTATGTTCCTACATTTATTCCATTaGCTGAACTTCCAATGTTTAACAAAAACCAGTATCAGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: YQISATFCMFLHLFH*LNFQCLTKTSISGF
Trigger: GAAGCCACTGATACTGGTTTTTGTTAAACATTGGAAGTTCAGGCAATGGAATAAATGTAGGAACATACAGAATGTTGCACTAATTTGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCGGGGTACATCCTTCATaGCACACCATGGACACAGCT +
Preference number: 2 (lower is better)
Translates to: ANKGSGILALPAFTCISPGVHPS*HTMDTA
Trigger: AGCTGTGTCCATGGTGTGTCATGAAGGATGTACCCC...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCTTCATGACACACCATaGACACAGCTCACTAGTTCC +
Preference number: 2 (lower is better)
Translates to: LALPAFTCISPQLSCALVLHDTP*TQLTSS
Trigger: GGAACTAGTGAGCTGTGTCCATGGTGTGTCATGAAG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGACTGGGATCTGCCCAGTaGCTCATGTTACTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRLGSAQ*LMLLSG
Trigger: CCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAG...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCC +
Preference number: 2 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRNLGTA*LHMHLA
Trigger: GGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPASTGP*DLPSGS
Trigger: TGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGC...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGCCCCAGCTAAGCTGTaGTCTGGTGGAGTTTCATCC +
Preference number: 2 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFAPAKL*SGGVSS
Trigger: GGATGAAACTCCACCAGAGCACAGCTTAGCTGGGGC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACAT +
Preference number: 2 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRKEAES*HCLPSH
Trigger: ATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGTGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: LALPAFTCISPQLSCALVCLEFP*KRYEEA
Trigger: AGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCA...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAAAAGGAGTCAGAACTaGCAATTGACAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: ANKGSGILALPAFTCISPKRSQN*QLTKQL
Trigger: CAGCTGCTTTGTCAATTGTCAGTTCTGACTCCTTTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCCTTCATGACACACCATaGACACAGCTCACTAGTTCC +
Preference number: 2 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPLHDTP*TQLTSS
Trigger: GGAACTAGTGAGCTGTGTCCATGGTGTGTCATGAAG...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAAACAAGAAACTGAATaGCTTGCTTTCAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ANKGSGILALPAFTCISPKQETE*LAFSRA
Trigger: GGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGAACTATGCACAACATaGGACAACTGTGCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRELCTT*DNCAVS
Trigger: TGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAAACATGAGACAACTGTaGTGTCTCACGAAGACACGA +
Preference number: 2 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRNMRQL*CLTKTR
Trigger: TCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEASTGP*DLPSGS
Trigger: TGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTCTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCLPAFT*ISPQLS
Trigger: GCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAG...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCACTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFALPAFT*ISPQLS
Trigger: GCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAG...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 2 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTTTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 2 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCTTCATGACACACCATaGACACAGCTCACTAGTTCC +
Preference number: 2 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCLHDTP*TQLTSS
Trigger: GGAACTAGTGAGCTGTGTCCATGGTGTGTCATGAAG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACTGGGATCTGCCCAGTaGCTCATGTTACTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEELGSAQ*LMLLSG
Trigger: CCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWNYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGAACTATGCACAACATaGGACAACTGTGCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFELCTT*DNCAVS
Trigger: TGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGCCCCAGCTAAGCTGTaGTCTGGTGGAGTTTCATCC +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCAPAKL*SGGVSS
Trigger: GGATGAAACTCCACCAGAGCACAGCTTAGCTGGGGC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTCTGGGATCTGCCCAGTaGCTCATGTTACTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCLGSAQ*LMLLSG
Trigger: CCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAG...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACT +
Preference number: 2 (lower is better)
Translates to: IWQTKEAESWHCLPSHASLSAEP*PRLLQT
Trigger: AGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACT +
Preference number: 2 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPLSAEP*PRLLQT
Trigger: AGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAG...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTAAACAAGAAACTGAATaGCTTGCTTTCAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: IWQTKEAESWHCLPSHASKQETE*LAFSRA
Trigger: GGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWCLEFP*KRYEEA
Trigger: AGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCA...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACAT +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAKEAES*HCLPSH
Trigger: ATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACAT +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCKEAES*HCLPSH
Trigger: ATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTT...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CAA 90 bp TGCCTGAACTTCCAATGTTTAACAAAAACCAGTATCAGTGGCTTCTaGAACACAGGTGGCCACATTCTCTCGGTTATCTACGTGCTCATA +
Preference number: 2 (lower is better)
Translates to: CLNFQCLTKTSISGF*NTGGHILSVIYVLI
Trigger: TATGAGCACGTAGATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTTGTTAAACATTGGAAGTTCAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 2 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCTGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCCLEFP*KRYEEA
Trigger: AGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCA...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAGGGGTACATCCTTCATaGCACACCATGGACACAGCT +
Preference number: 2 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEGVHPS*HTMDTA
Trigger: AGCTGTGTCCATGGTGTGTCATGAAGGATGTACCCC...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGAAAGGACTGGGTGGTaGGGAAACATGAACTATGCA +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAERTGW*GNMNYA
Trigger: TGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGAAAGGACTGGGTGGTaGGGAAACATGAACTATGCA +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCERTGW*GNMNYA
Trigger: TGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR GCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 2 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACTTCTTGAACACAGGTaGCCACATTCTCTCGGTTAT +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEELLEHR*PHSLGY
Trigger: ATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCACACGACACTCACCTATaGAGTGTCCAGACTGAAAAC +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAHDTHL*SVQTEN
Trigger: GTTTTCAGTCTGGACACTCCATAGGTGAGTGTCGTG...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGTCACACACAATGAATaGCCAGGTGGAGATTTTATC +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEVTHNE*PGGDFI
Trigger: GATAAAATCTCCACCTGGTCATTCATTGTGTGTGAC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGAACTATGCACAACATaGGACAACTGTGCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCELCTT*DNCAVS
Trigger: TGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGGTGGTGAGGAAACATaGACTATGCACAACATGAGA +
Preference number: 2 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIGGEET*TMHNMR
Trigger: TCTCATGTTGTGCATAGTTCATGTTTCCTCACCACC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAAAAAACCAGTATCAGTaGCTTCTTGAACACAGGTGG +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEKNQYQ*LLEHRW
Trigger: CCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCNYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFANYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGTCACACACAATGAATaGCCAGGTGGAGATTTTATC +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCVTHNE*PGGDFI
Trigger: GATAAAATCTCCACCTGGTCATTCATTGTGTGTGAC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATCAAGTCACACACAATaGATGACCAGGTGGAGATTT +
Preference number: 2 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFASSHTQ*MTRWRF
Trigger: AAATCTCCACCTGGTCATTCATTGTGTGTGACTTGA...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTTCAAGTCACACACAATaGATGACCAGGTGGAGATTT +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCSSHTQ*MTRWRF
Trigger: AAATCTCCACCTGGTCATTCATTGTGTGTGACTTGA...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTAAACAAGAAACTGAATaGCTTGCTTTCAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCKQETE*LAFSRA
Trigger: GGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTT...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCCGAAATATTTGTTTaGATGCTGGTGATTCAGATT +
Preference number: 2 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEAEIFV*MLVIQI
Trigger: AATCTGAATCACCAGCATTCAAACAAATATTTCGGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCAGACTGAAAACCTCTaGATAACACACACATTTGTG +
Preference number: 2 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIQTENL*ITHTFV
Trigger: CACAAATGTGTGTGTTATTCAGAGGTTTTCAGTCTG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTCAGACTGAAAACCTCTaGATAACACACACATTTGTG +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCQTENL*ITHTFV
Trigger: CACAAATGTGTGTGTTATTCAGAGGTTTTCAGTCTG...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGCCGAAATATTTGTTTaGATGCTGGTGATTCAGATT +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCAEIFV*MLVIQI
Trigger: AATCTGAATCACCAGCATTCAAACAAATATTTCGGC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAAAAAGGAGTCAGAACTaGCAATTGACAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEKRSQN*QLTKQL
Trigger: CAGCTGCTTTGTCAATTGTCAGTTCTGACTCCTTTT...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGAACAGGGTCCCAAGTaGAAAAGAAAAGTTAACATA +
Preference number: 2 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCEQGPK*KRKVNI
Trigger: TATGTTAACTTTTCTTTTCCACTTGGGACCCTGTTC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGAACAGGGTCCCAAGTaGAAAAGAAAAGTTAACATA +
Preference number: 2 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCEQGPK*KRKVNI
Trigger: TATGTTAACTTTTCTTTTCCACTTGGGACCCTGTTC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR GCA 72 bp AAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: KGSGILALPAFT*ISPQLSCALVE
Trigger: CTCCACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR GCA 72 bp TTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCCCCAGCTAAGCTGTGC +
Preference number: 3 (lower is better)
Translates to: FGKQRKRNLGTA*LHMHLAPAKLC
Trigger: GCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp TATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCATGTTACTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: YYRLDPAASTGP*DLPSGSCYSLG
Trigger: CCCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp GTTTCTAGTATTTGGCAAACAAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACATGCATCTCGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: VSSIWQTKEAES*HCLPSHASRPS
Trigger: GCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAATACTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 72 bp GACTGGGTGGTGAGGAAACATGAACTATGCACAACATaGGACAACTGTGCTGTCTCACGAAGACACGACACT +
Preference number: 3 (lower is better)
Translates to: DWVVRKHELCTT*DNCAVSRRHDT
Trigger: AGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTCATGTTTCCTCACCACCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp CTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTaGTTCTCAGAAGAGTTTTCAGACAGGAACTGTTTC +
Preference number: 3 (lower is better)
Translates to: LRAPCRIHTQGL*FSEEFSDRNCF
Trigger: GAAACAGTTCCTGTCTGAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp AACAAGAAACTGAATGGCTTGCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACTAGATCCTGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: NKKLNGLLSAEP*PRLLQTRSCSK
Trigger: CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp TGTTACTCTCTGGGGTACATCCTTCATGACACACCATaGACACAGCTCACTAGTTCCAGTCAACCAAAATTT +
Preference number: 3 (lower is better)
Translates to: CYSLGYILHDTP*TQLTSSSQPKF
Trigger: AAATTTTGGTTGACTGGAACTAGTGAGCTGTGTCCATGGTGTGTCATGAAGGATGTACCCCAGAGAGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CCA 72 bp AACAAAAACCAGTATCAGTGGCTTCTTGAACACAGGTaGCCACATTCTCTCGGTTATCTACGTGCTCATACA +
Preference number: 3 (lower is better)
Translates to: NKNQYQWLLEHR*PHSLGYLRAHT
Trigger: TGTATGAGCACGTAGATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CAA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTAAGAAACTGAATGGCTaGCTTTCAGCAGAGCCATGG +
Preference number: 3 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIKKLNG*LSAEPW
Trigger: CCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTT...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CAA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTAAGAAACTGAATGGCTaGCTTTCAGCAGAGCCATGG +
Preference number: 3 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCKKLNG*LSAEPW
Trigger: CCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTT...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CAA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAAAGAAACTGAATGGCTaGCTTTCAGCAGAGCCATGG +
Preference number: 3 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAKKLNG*LSAEPW
Trigger: CCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CAA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAAGTATCAGTGGCTTCTaGAACACAGGTGGCCACATT +
Preference number: 3 (lower is better)
Translates to: IKSHTMNDQVEILSDYKESISGF*NTGGHI
Trigger: AATGTGGCCACCTGTGTTCAAGAAGCCACTGATACT...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR-3UTR CAA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCCTACATTTATTCCATaGCCTGAACTTCCAATGTTT +
Preference number: 3 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIPTFIP*PELPMF
Trigger: AAACATTGGAAGTTCAGGCAATGGAATAAATGTAGG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 72 bp CTCCTCTTTAGAAATATCACTGCTTGGAGAATGTTGTaGCAAGCAACCAAATACTCAAAAGACCTTATCCAC +
Preference number: 3 (lower is better)
Translates to: LLFRNITAWRML*QATKYSKDLIH
Trigger: GTGGATAAGGTCTTTTGAGTATTTGGTTGCTTGTCACAACATTCTCCAAGCAGTGATATTTCTAAAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR TCA 72 bp TTCTTTGGTGACAGGAATGATTGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCTGACGGCAAAATTTAT +
Preference number: 3 (lower is better)
Translates to: FFGDRNDCLEFP*KRYEEADGKIY
Trigger: ATAAATTTTGCCGTCAGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCAATCATTCCTGTCACCAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCCCCCAACGCTCGCGTaGCGCGTTCCCGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVPPTLA*RVPASK
Trigger: CTTGGAGGCGGGAACGCGGCACGCGAGCGTTGGGGG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGTGGCATGCTCACCAGTaGGCTCCCCGGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVWHAHQ*APRALC
Trigger: GCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCA...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCCAGGCCACCCTGCCTaGTGGCCTTTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVPGHPA*WPLSVS
Trigger: GCTCACTGACAAAGGCCAGCAGGCAGGGTGGCCTGG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGGCCACCCTGCCTGCTaGCCTTTGTCAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVGHPAC*PLSVSS
Trigger: GCTGCTCACTGACAAAGGCCAGCAGGCAGGGTGGCC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGGTGGTCACTGCGCATaGAACGTCGGTCACACACCG +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVGGHCA*NVGHTP
Trigger: CGGTGTGTGACCGACGTTTCATGCGCAGTGACCACC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGCCGCAGCGAAGCCCTaGACGCCCCACCTCCCGCAT +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRAAAKP*TPHLPH
Trigger: ATGCGGGAGGTGGGGCGTGCAGGGCTTCGCTGCGGC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCAGCTTGCCAACCTCTaGCTGCCAGCCTGGGATCTT +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVQLANL*LPAWDL
Trigger: AAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVLPAFT*ISPQLS
Trigger: GCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCCGCCTCCAAGGCAGTaGGGCGCTCCCGCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKPPPRQ*GAPASR
Trigger: ACGGGAGGCGGGAGCGCCGCACTGCCTTGGAGGCGG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCTCGCCCGGCCCACAGTaGCCGCACACCACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCSPGPQ*PHTTRP
Trigger: GGGCCTCGTGGTGTGCGGGCACTGTGGGCCGGGCGA...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGTTCTTGGTCGTCATGTaGCGCCGGGCATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVFLVVM*RRACFV
Trigger: GACGAAGCATGCCCGGCGCCACATGACGACCAAGAA...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCTTTCAGGCAGAGGCTaGCATGCTCACCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVLSGRG*HAHQWA
Trigger: AGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCGCTGGCCTTTGTCAGTaGGCAGCAGGCCACCAGACT +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPAGLCQ*AAGHQT
Trigger: AGTCTGGTGGCCTGCTGCTCACTGACAAAGGCCAGC...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAACATCACAGCTCCCTaGGGCACAGCAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPNITAP*GTAGPT
Trigger: CGTGGGACCTGCTGTGCCTCAGGGAGCTGTGATGTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAAGCCATGACATTGGCTaGACAGGGGGCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRSHDIG*TGGRRR
Trigger: CCTCCGCCTGCCCCCTGTGCAGCCAATGTCATGGCT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCCCGCCTCCAAGCGTTaGCCCGCCTCCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCPASKR*PASKAV
Trigger: CACTGCCTTGGAGGCGGGGCAACGCTTGGAGGCGGG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGACCCCGCTCAGAGCTCTaGCCACTACGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRPRSEL*PLRQRT
Trigger: AGTCCTCTGCCGTAGTGGCCAGAGCTCTGAGCGGGG...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCGGCCACCCTGCCTGCTaGCCTTTGTCAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPGHPAC*PLSVSS
Trigger: GCTGCTCACTGACAAAGGCCAGCAGGCAGGGTGGCC...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTGGCATGCTCACCAGTaGGCTCCCCGGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWWHAHQ*APRALC
Trigger: GCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCA...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCTATTCCCGGCAGCCATaGCATTGGCTGCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPYSRQP*HWLHRG
Trigger: CCCCCTGTGCAGCCAATGTCATGGCTGCCGGGAATA...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCGCGTCGTCTGGGCCTaGGAAGTCCGGCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFRVVWA*EVRRVH
Trigger: ATGCACACGCCGGACTTCGCAGGCCCAGACGACGCG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGCTCCCCGGGCTCTCTaGAGAGGCGATTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRAPRAL*RGDSVQ
Trigger: CTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTAGGCAGAGGCTGGCATaGTCACCAGTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASRQRLA*SPVGSP
Trigger: CGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAGGTGTCCTTGTCGATaGCTCCACGAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPRCPCR*LHEIRA
Trigger: AGCCCTGATCTCGTGGAGCCATCGACAAGGACACCT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCAGCCTGGGATCTTCTTaGTCGTCATGTGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPSLGSS*SSCGAG
Trigger: CCCGGCGCCACATGACGACCAAGAAGATCCCAGGCT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACCGGCGTGTGCATCGTaGAGGCCGGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEPACAS*RPAGSN
Trigger: GTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS-3UTR GCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGTGAGGTGTGTGTCCTaGAAAGTTTCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVVRCVS*KVSKCP
Trigger: GGGACACTTTGAAACTTTGCAGGACACACACCTCAC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCAGCCATGACATTGGCTaGACAGGGGGCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFSHDIG*TGGRRR
Trigger: CCTCCGCCTGCCCCCTGTGCAGCCAATGTCATGGCT...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGCTCCCCGGGCTCTCTaGAGAGGCGATTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWAPRAL*RGDSVQ
Trigger: CTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCACTACGGCAGAGGACTaGAGAACATCCGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPTTAED*RTSVAV
Trigger: TACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRASTGP*DLPSGS
Trigger: TGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAACATCACAGCTCCCTaGGGCACAGCAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPNITAP*GTAGPT
Trigger: CGTGGGACCTGCTGTGCCTCAGGGAGCTGTGATGTT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCAACATCACAGCTCCCTaGGGCACAGCAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFNITAP*GTAGPT
Trigger: CGTGGGACCTGCTGTGCCTCAGGGAGCTGTGATGTT...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTGGTGGTCACTGCGCATaGAACGTCGGTCACACACCG +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPGGHCA*NVGHTP
Trigger: CGGTGTGTGACCGACGTTTCATGCGCAGTGACCACC...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGGTGGTCACTGCGCATaGAACGTCGGTCACACACCG +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKGGHCA*NVGHTP
Trigger: CGGTGTGTGACCGACGTTTCATGCGCAGTGACCACC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGGTGGTGAGGAAACATaGACTATGCACAACATGAGA +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVGGEET*TMHNMR
Trigger: TCTCATGTTGTGCATAGTTCATGTTTCCTCACCACC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGCGAAGTCCGGCGTGTaGATCGTGCAGGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIAKSGV*IVQAGR
Trigger: CCGGCCGGCCTGCACGATGCACACGCCGGACTTCGC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGATTGCCAACCTCTGCCTaGCAGCCTGGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRLPTSA*QPGIFL
Trigger: CAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAA...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCTTGCCAACCTCTGCCTaGCAGCCTGGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPLPTSA*QPGIFL
Trigger: CAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAA...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGCCCCAGCTAAGCTGTaGTCTGGTGGAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRAPAKL*SGGVSS
Trigger: GGATGAAACTCCACCAGAGCACAGCTTAGCTGGGGC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTTGCGCGCGCGTCGTCTaGGCCTGCGAAGTCCGGCGT +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCCARVV*ACEVRR
Trigger: ACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCA...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGTGGCTGTACATGCTTTaGAATCTGTTACTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVWLYML*NLLLGE
Trigger: CTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCA...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAGAAAGCCGGCAATCTaGAGTCTGGATGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPRKPAI*SLDGGK
Trigger: TTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCAGAGGTGATGAACACTaGAGCAGGGGCAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPRGDEH*SRGKGQ
Trigger: TTGCCCCTTGCCCCTGCTCCAGTGTTCATCACCTCT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCCTGGGATCTGCCCAGTaGCTCATGTTACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPLGSAQ*LMLLSG
Trigger: CCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAG...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACT +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVLSAEP*PRLLQT
Trigger: AGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPKEAES*HCLPSH
Trigger: ATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGAGGTGGAAGGGGGATaGTTTACACAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVEVEGG*FTQSIS
Trigger: GGAAATACTTTGTGTAAACCATCCCCCTTCCACCTC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCTATGCACAGTGGTGGTaGCATCCCCAGAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPYAQWW*HPQSQR
Trigger: TCTCTGACTCTGGGGATGTCACCACCACTGTGCATA...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGATATGCACAGTGGTGGTaGCATCCCCAGAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRYAQWW*HPQSQR
Trigger: TCTCTGACTCTGGGGATGTCACCACCACTGTGCATA...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAACGAGATCAGGGCTCTaGGGAGGAGTTATGCACAGA +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRTRSGL*GGVMHR
Trigger: TCTGTGCATAACTCCTCCTCAGAGCCCTGATCTCGT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCTTGTGCAAGCAGGGCTaGCAGGACACCAAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPLCKQG*QDTKLV
Trigger: CACTAACTTGGTGTCCTGTCAGCCCTGCTTGCACAA...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGATGGAGTGTCCAGACTaGAAACCTCTGAATAACACA +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVMECPD*KPLNNT
Trigger: TGTGTTATTCAGAGGTTTTCAGTCTGGACACTCCAT...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCACTCACATATGTCCATaGTGTCAACCGGCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCTHICP*CQPARP
Trigger: CGGCCGCGCCGGTTGACATCATGGACATATGTGAGT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540845.5
CDS-3UTR GCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCCCCTGTGTGAGTTCTaGGGTGGCGTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFPLCEF*GGVTAH
Trigger: ATGAGCTGTCACGCCACCGCAGAACTCACACAGGGG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCCCCTGTGTGAGTTCTaGGGTGGCGTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASPLCEF*GGVTAH
Trigger: ATGAGCTGTCACGCCACCGCAGAACTCACACAGGGG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCAGCTTGCCAACCTCTaGCTGCCAGCCTGGGATCTT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCQLANL*LPAWDL
Trigger: AAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAAGGCAGAGGCTGGCATaGTCACCAGTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEERQRLA*SPVGSP
Trigger: CGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASLPAFT*ISPQLS
Trigger: GCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGACAGCTGAGGGCTCCATaGCGAATCCATACACAAGGT +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRQLRAP*RIHTQG
Trigger: ACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTG...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCTTTCAGGCAGAGGCTaGCATGCTCACCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFLSGRG*HAHQWA
Trigger: AGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGACCTTTCTGGGATCTTTaGCCCCAGGAGCTCATACAA +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRPFWDL*PQELIQ
Trigger: TTGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGG...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCAGTCAGAGACAGGCGTaGGGGGTCTTATCCGCAACA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFSQRQA*GVLSAT
Trigger: TGTTGCGGATAAGACCCCTCACGCCTGTCTCTGACT...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCTTTGGTGAGCAAGTCTaGACTGCACCAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFFGEQV*TAPGHP
Trigger: AGGGTGGCCTGGTGCAGTTCAGACTTGCTCACCAAA...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCTTTGGTGAGCAAGTCTaGACTGCACCAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCFGEQV*TAPGHP
Trigger: AGGGTGGCCTGGTGCAGTTCAGACTTGCTCACCAAA...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTTTTGGTGAGCAAGTCTaGACTGCACCAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASFGEQV*TAPGHP
Trigger: AGGGTGGCCTGGTGCAGTTCAGACTTGCTCACCAAA...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCGTATCAGTGGCTTCTTaGACACAGGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPVSVAS*TQVATF
Trigger: GAATGTGGCCACCTGTGTTCAAGAAGCCACTGATAC...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCAGACTGAAAACCTCTaGATAACACACACATTTGTG +
Preference number: 4 (lower is better)
Translates to: LALPAFTCISPQLSCALVQTENL*ITHTFV
Trigger: CACAAATGTGTGTGTTATTCAGAGGTTTTCAGTCTG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCDLSLS*RFLSRM
Trigger: CATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTC...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKDLSLS*RFLSRM
Trigger: CATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGTGGCTGCATCCATATaGACAGTGGTGGTGACATCC +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWVAASI*TVVVTS
Trigger: GGATGTCACCACCACTGTGCATATGGATGCAGCCAC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTAGGCAGAGGCTGGCATaGTCACCAGTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIRQRLA*SPVGSP
Trigger: CGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCT...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTGCCCCAGCTAAGCTGTaGTCTGGTGGAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASAPAKL*SGGVSS
Trigger: GGATGAAACTCCACCAGAGCACAGCTTAGCTGGGGC...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCC +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWNLGTA*LHMHLA
Trigger: GGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAACATGAGACAACTGTaGTGTCTCACGAAGACACGA +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPNMRQL*CLTKTR
Trigger: TCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGCAGCTGAGGGCTCCATaGCGAATCCATACACAAGGT +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWQLRAP*RIHTQG
Trigger: ACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTG...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACCCCGCTCAGAGCTCTaGCCACTACGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEPRSEL*PLRQRT
Trigger: AGTCCTCTGCCGTAGTGGCCAGAGCTCTGAGCGGGG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCGGCAATCTGGAGTCTaGATGGTGGGAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFRQSGV*MVGKQA
Trigger: TGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCCAGAAATCAGAGGGGTaGTTTTCCTGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPQKSEG*FSWAGH
Trigger: ATGACCTGCCCAGGAAAACCACCCCTCTGATTTCTG...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGTCACAGGGATCATCTaGCAAAGGACAGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFVTGII*QRTGGA
Trigger: TGCTCCCCCTGTCCTTTGCCAGATGATCCCTGTGAC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGAGGTGATGAACACTaGAGCAGGGGCAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCRGDEH*SRGKGQ
Trigger: TTGCCCCTTGCCCCTGCTCCAGTGTTCATCACCTCT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGGTCTTCCGGCAACCTaGGAAGCTGCATACATAGTT +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRGLPAT*EAAYIV
Trigger: AACTATGTATGCAGCTTCCCAGGTTGCCGGAAGACC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCTCTGCCTGCCAGCCTaGGATCTTCTTGGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASLCLPA*DLLGRH
Trigger: ATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTCTCTGCCTGCCAGCCTaGGATCTTCTTGGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPLCLPA*DLLGRH
Trigger: ATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAG...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCTCTGCCTGCCAGCCTaGGATCTTCTTGGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKLCLPA*DLLGRH
Trigger: ATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTTGGCATGCTCACCAGTaGGCTCCCCGGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCWHAHQ*APRALC
Trigger: GCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCA...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCTGGGATCTGCCCAGTaGCTCATGTTACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASLGSAQ*LMLLSG
Trigger: CCCAGAGAGTAACATGAGCCACTGGGCAGATCCCAG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTACTCACATATGTCCATaGTGTCAACTGCGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASTHICP*CQLRAR
Trigger: ACGCGCGCGCAGTTGACATCATGGACATATGTGAGT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCACGAGATCAGGGCTCTaGGGAGGAGTTATGCACAGA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFTRSGL*GGVMHR
Trigger: TCTGTGCATAACTCCTCCTCAGAGCCCTGATCTCGT...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTTTGTGCAAGCAGGGCTaGCAGGACACCAAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASLCKQG*QDTKLV
Trigger: CACTAACTTGGTGTCCTGTCAGCCCTGCTTGCACAA...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCTGGCCTTTGTCAGTaGGCAGCAGGCCACCAGACT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEAGLCQ*AAGHQT
Trigger: AGTCTGGTGGCCTGCTGCTCACTGACAAAGGCCAGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPNYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCGGGGTACATCCTTCATaGCACACCATGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCGVHPS*HTMDTA
Trigger: AGCTGTGTCCATGGTGTGTCATGAAGGATGTACCCC...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCGTCACACACAATGAATaGCCAGGTGGAGATTTTATC +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPVTHNE*PGGDFI
Trigger: GATAAAATCTCCACCTGGTCATTCATTGTGTGTGAC...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCGAAAGGACTGGGTGGTaGGGAAACATGAACTATGCA +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPERTGW*GNMNYA
Trigger: TGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTC...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCGTGGCTGCATCCATATaGACAGTGGTGGTGACATCC +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCVAASI*TVVVTS
Trigger: GGATGTCACCACCACTGTGCATATGGATGCAGCCAC...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTCCAGGCCACCCTGCCTaGTGGCCTTTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCPGHPA*WPLSVS
Trigger: GCTCACTGACAAAGGCCAGCAGGCAGGGTGGCCTGG...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCCAGGCCACCCTGCCTaGTGGCCTTTGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIPGHPA*WPLSVS
Trigger: GCTCACTGACAAAGGCCAGCAGGCAGGGTGGCCTGG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCC +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCNLGTA*LHMHLA
Trigger: GGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGAATCTTGGCACTGCCTaGCTTCACATGCATCTCGCC +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKNLGTA*LHMHLA
Trigger: GGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATT...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGACTACGGCAGAGGACTaGAGAACATCCGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKTTAED*RTSVAV
Trigger: TACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGT...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCCCCGCTCAGAGCTCTaGCCACTACGGCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIPRSEL*PLRQRT
Trigger: AGTCCTCTGCCGTAGTGGCCAGAGCTCTGAGCGGGG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAATCTGGAGTCTGGATaGTGGGAAAGCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPNLESG*WESRQQ
Trigger: CTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAATCTGGAGTCTGGATaGTGGGAAAGCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCNLESG*WESRQQ
Trigger: CTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTAATCTGGAGTCTGGATaGTGGGAAAGCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASNLESG*WESRQQ
Trigger: CTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGGTCTTCCGGCAACCTaGGAAGCTGCATACATAGTT +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWGLPAT*EAAYIV
Trigger: AACTATGTATGCAGCTTCCCAGGTTGCCGGAAGACC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGAAGGAAGCGGAATCTTaGCACTGCCTGCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWKEAES*HCLPSH
Trigger: ATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCACAGACAAATGGAGGTaGAAGGGGGATGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPTDKWR*KGDGLH
Trigger: GTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATATTCCCGGCAGCCATaGCATTGGCTGCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAYSRQP*HWLHRG
Trigger: CCCCCTGTGCAGCCAATGTCATGGCTGCCGGGAATA...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTTATTCCCGGCAGCCATaGCATTGGCTGCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIYSRQP*HWLHRG
Trigger: CCCCCTGTGCAGCCAATGTCATGGCTGCCGGGAATA...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGTATCAGTGGCTTCTTaGACACAGGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKVSVAS*TQVATF
Trigger: GAATGTGGCCACCTGTGTTCAAGAAGCCACTGATAC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGCTTCCATGTCTGTCTaGTCCAAGATGCTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWASMSV*SKMLQV
Trigger: TACTTGCAGCATCTTGGAGCAGACAGACATGGAAGC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGCTCTTCTCCTTCTCTaGTGTCAGAAAGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKALLLL*CQKAGN
Trigger: ATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACAGCTTGCCAACCTCTaGCTGCCAGCCTGGGATCTT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEQLANL*LPAWDL
Trigger: AAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGCTCCCCGGGCTCTCTaGAGAGGCGATTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAAPRAL*RGDSVQ
Trigger: CTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTTGGTAGTTCAGGTGTaGCTGCATCCATATGCACAG +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWLVVQV*LHPYAQ
Trigger: CTGTGCATATGGATGCAGCCACACCTGAACTACCAA...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCACTGGAGTCTGGATGGTaGGAAAGCAGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFALESGW*ESRQQG
Trigger: GCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAG...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCTGGAGTCTGGATGGTaGGAAAGCAGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIILESGW*ESRQQG
Trigger: GCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAGAAAGCCGGCAATCTaGAGTCTGGATGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPRKPAI*SLDGGK
Trigger: TTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGAGAAAGCCGGCAATCTaGAGTCTGGATGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKRKPAI*SLDGGK
Trigger: TTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCT...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCAGAAATCAGAGGGGTaGTTTTCCTGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASQKSEG*FSWAGH
Trigger: ATGACCTGCCCAGGAAAACCACCCCTCTGATTTCTG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGGTCTTCCGGCAACCTaGGAAGCTGCATACATAGTT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFGLPAT*EAAYIV
Trigger: AACTATGTATGCAGCTTCCCAGGTTGCCGGAAGACC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTAGCCTGGGATCTTCTTaGTCGTCATGTGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIISLGSS*SSCGAG
Trigger: CCCGGCGCCACATGACGACCAAGAAGATCCCAGGCT...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACTTTCAGGCAGAGGCTaGCATGCTCACCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEELSGRG*HAHQWA
Trigger: AGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCCTTCTTGAACACAGGTaGCCACATTCTCTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPLLEHR*PHSLGY
Trigger: ATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAG...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
3UTR CAA 72 bp CAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTaGTGGTTCTCAGAAGAGTTTTCAGACAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QLRAPCRIHTQG*WFSEEFSDRNC
Trigger: ACAGTTCCTGTCTGAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPNYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 4 (lower is better)
Translates to: ANKGSGILALPAFTCISPLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCTCAAGTCACACACAATaGATGACCAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPSSHTQ*MTRWRF
Trigger: AAATCTCCACCTGGTCATTCATTGTGTGTGACTTGA...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGAACTATGCACAACATaGGACAACTGTGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWELCTT*DNCAVS
Trigger: TGAGACAGCACAGTTGTCTCATGTTGTGCATAGTTC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGAAAGGACTGGGTGGTaGGGAAACATGAACTATGCA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFERTGW*GNMNYA
Trigger: TGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAAGCCATGACATTGGCTaGACAGGGGGCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKESHDIG*TGGRRR
Trigger: CCTCCGCCTGCCCCCTGTGCAGCCAATGTCATGGCT...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAATTGCCAACCTCTGCCTaGCAGCCTGGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEELPTSA*QPGIFL
Trigger: CAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAA...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCAAGATCAAGCAAAACTaGCCAGGCAATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPKIKQN*PGNKVH
Trigger: GTGCACTTTATTGCCTGGGCAGTTTTGCTTGATCTT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAAGGTGTCCTTGTCGATaGCTCCACGAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEERCPCR*LHEIRA
Trigger: AGCCCTGATCTCGTGGAGCCATCGACAAGGACACCT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATTCTTGGTCGTCATGTaGCGCCGGGCATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAFLVVM*RRACFV
Trigger: GACGAAGCATGCCCGGCGCCACATGACGACCAAGAA...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAASTGP*DLPSGS
Trigger: TGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCAAAAACCAGTATCAGTaGCTTCTTGAACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPKNQYQ*LLEHRW
Trigger: CCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCACGACACTCACCTATaGAGTGTCCAGACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASHDTHL*SVQTEN
Trigger: GTTTTCAGTCTGGACACTCCATAGGTGAGTGTCGTG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCTTTCAACAGACAAATaGAGGTGGAAGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCLSTDK*RWKGDG
Trigger: ACCATCCCCCTTCCACCTCCATTTGTCTGTTGAAAG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAACGAGATCAGGGCTCTaGGGAGGAGTTATGCACAGA +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEETRSGL*GGVMHR
Trigger: TCTGTGCATAACTCCTCCTCAGAGCCCTGATCTCGT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCAAGTCACACACAATaGATGACCAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWSSHTQ*MTRWRF
Trigger: AAATCTCCACCTGGTCATTCATTGTGTGTGACTTGA...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGGTGGTGAGGAAACATaGACTATGCACAACATGAGA +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKGGEET*TMHNMR
Trigger: TCTCATGTTGTGCATAGTTCATGTTTCCTCACCACC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGGTGGTGAGGAAACATaGACTATGCACAACATGAGA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFGGEET*TMHNMR
Trigger: TCTCATGTTGTGCATAGTTCATGTTTCCTCACCACC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGATCCGTGGCTGTACATaGTTTGGAATCTGTTACTTG +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWIRGCT*FGICYL
Trigger: CAAGTAACAGATTCCAAAGCATGTACAGCCACGGAT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACAGCTGAGGGCTCCATaGCGAATCCATACACAAGGT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEQLRAP*RIHTQG
Trigger: ACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAAGGTGTCCTTGTCGATaGCTCCACGAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFARCPCR*LHEIRA
Trigger: AGCCCTGATCTCGTGGAGCCATCGACAAGGACACCT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCTGGCTGTACATGCTTTaGAATCTGTTACTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCWLYML*NLLLGE
Trigger: CTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCA...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCACTGGAGAACATCCGTaGCTGTACATGCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCTGEHP*LYMLWN
Trigger: ATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTACTGGAGAACATCCGTaGCTGTACATGCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASTGEHP*LYMLWN
Trigger: ATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACTGGAGTCTGGATGGTaGGAAAGCAGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKELESGW*ESRQQG
Trigger: GCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTCGGCAATCTGGAGTCTaGATGGTGGGAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCRQSGV*MVGKQA
Trigger: TGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCG...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCGGCAATCTGGAGTCTaGATGGTGGGAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIRQSGV*MVGKQA
Trigger: TGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGTCACAGGGATCATCTaGCAAAGGACAGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCVTGII*QRTGGA
Trigger: TGCTCCCCCTGTCCTTTGCCAGATGATCCCTGTGAC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGTCACAGGGATCATCTaGCAAAGGACAGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAVTGII*QRTGGA
Trigger: TGCTCCCCCTGTCCTTTGCCAGATGATCCCTGTGAC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAAGAGGTGATGAACACTaGAGCAGGGGCAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFARGDEH*SRGKGQ
Trigger: TTGCCCCTTGCCCCTGCTCCAGTGTTCATCACCTCT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKLSAEP*PRLLQT
Trigger: AGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCTTTCAGCAGAGCCATaGCCAAGACTATTACAGACT +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCLSAEP*PRLLQT
Trigger: AGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGAAACAAGAAACTGAATaGCTTGCTTTCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWKQETE*LAFSRA
Trigger: GGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCTTCTTGAACACAGGTaGCCACATTCTCTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFLLEHR*PHSLGY
Trigger: ATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCTTCTTGAACACAGGTaGCCACATTCTCTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKLLEHR*PHSLGY
Trigger: ATAACCGAGAGAATGTGGCCACCTGTGTTCAAGAAG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGAAAAACCAGTATCAGTaGCTTCTTGAACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWKNQYQ*LLEHRW
Trigger: CCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTT...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGAGGTGGAAGGGGGATaGTTTACACAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKEVEGG*FTQSIS
Trigger: GGAAATACTTTGTGTAAACCATCCCCCTTCCACCTC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACCTTTCTGGGATCTTTaGCCCCAGGAGCTCATACAA +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEPFWDL*PQELIQ
Trigger: TTGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTTATGCACAGTGGTGGTaGCATCCCCAGAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCYAQWW*HPQSQR
Trigger: TCTCTGACTCTGGGGATGTCACCACCACTGTGCATA...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTTTGTGCAAGCAGGGCTaGCAGGACACCAAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIILCKQG*QDTKLV
Trigger: CACTAACTTGGTGTCCTGTCAGCCCTGCTTGCACAA...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAACTACAAAAGATACTaGACAGGGTCCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCNYKRY*TGSQVE
Trigger: TTCCACTTGGGACCCTGTTCAGTATCTTTTGTAGTT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGATGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRCLEFP*KRYEEA
Trigger: AGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCA...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGGGGTACATCCTTCATaGCACACCATGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCGVHPS*HTMDTA
Trigger: AGCTGTGTCCATGGTGTGTCATGAAGGATGTACCCC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAAAAGGAGTCAGAACTaGCAATTGACAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCKRSQN*QLTKQL
Trigger: CAGCTGCTTTGTCAATTGTCAGTTCTGACTCCTTTT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTAAAAGGAGTCAGAACTaGCAATTGACAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASKRSQN*QLTKQL
Trigger: CAGCTGCTTTGTCAATTGTCAGTTCTGACTCCTTTT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAAAAGGAGTCAGAACTaGCAATTGACAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPKRSQN*QLTKQL
Trigger: CAGCTGCTTTGTCAATTGTCAGTTCTGACTCCTTTT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTTCAAGTCACACACAATaGATGACCAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: IWQTKEAESWHCLPSHASSSHTQ*MTRWRF
Trigger: AAATCTCCACCTGGTCATTCATTGTGTGTGACTTGA...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTGCTTGGAGAATGTTGTaGCAAGCAACCAAATACTCA +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPAWRML*QATKYS
Trigger: TGAGTATTTGGTTGCTTGTCACAACATTCTCCAAGC...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGTGGCTGCATCCATATaGACAGTGGTGGTGACATCC +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCVAASI*TVVVTS
Trigger: GGATGTCACCACCACTGTGCATATGGATGCAGCCAC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCATCCGTGGCTGTACATaGTTTGGAATCTGTTACTTG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCIRGCT*FGICYL
Trigger: CAAGTAACAGATTCCAAAGCATGTACAGCCACGGAT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCTCTTCTCCTTCTCTaGTGTCAGAAAGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEALLLL*CQKAGN
Trigger: ATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACCCCTGTGTGAGTTCTaGGGTGGCGTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEPLCEF*GGVTAH
Trigger: ATGAGCTGTCACGCCACCGCAGAACTCACACAGGGG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACTGCCTGCCTTCACATaGATCTCGCCCCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKELPAFT*ISPQLS
Trigger: GCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGCGGAATCTTGGCACTaGCTGCCTTCACATGCATCT +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCAESWH*LPSHAS
Trigger: AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAAGATCAAGCAAAACTaGCCAGGCAATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPKIKQN*PGNKVH
Trigger: GTGCACTTTATTGCCTGGGCAGTTTTGCTTGATCTT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTACTACGGCAGAGGACTaGAGAACATCCGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIITTAED*RTSVAV
Trigger: TACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGT...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACAGAAATCAGAGGGGTaGTTTTCCTGGGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEQKSEG*FSWAGH
Trigger: ATGACCTGCCCAGGAAAACCACCCCTCTGATTTCTG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAATTCTTGGTCGTCATGTaGCGCCGGGCATGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEFLVVM*RRACFV
Trigger: GACGAAGCATGCCCGGCGCCACATGACGACCAAGAA...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGAACAGGGTCCCAAGTaGAAAAGAAAAGTTAACATA +
Preference number: 4 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRREQGPK*KRKVNI
Trigger: TATGTTAACTTTTCTTTTCCACTTGGGACCCTGTTC...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAGCAAGTACTGGTCCCTaGGATCTGCCCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEASTGP*DLPSGS
Trigger: TGAGCCACTGGGCAGATCCCAGGGACCAGTACTTGC...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTAAACAAGAAACTGAATaGCTTGCTTTCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPKQETE*LAFSRA
Trigger: GGCTCTGCTGAAAGCAAGCCATTCAGTTTCTTGTTT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAAAAACCAGTATCAGTaGCTTCTTGAACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCKNQYQ*LLEHRW
Trigger: CCACCTGTGTTCAAGAAGCCACTGATACTGGTTTTT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGTATCAGTGGCTTCTTaGACACAGGTGGCCACATTC +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCVSVAS*TQVATF
Trigger: GAATGTGGCCACCTGTGTTCAAGAAGCCACTGATAC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCTTCCATGTCTGTCTaGTCCAAGATGCTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEASMSV*SKMLQV
Trigger: TACTTGCAGCATCTTGGAGCAGACAGACATGGAAGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGCTCTTCTCCTTCTCTaGTGTCAGAAAGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIALLLL*CQKAGN
Trigger: ATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGGCAACCTGGGAAGCTaGATACATAGTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCGNLGS*IHSSSF
Trigger: GAAGGAGGAACTATGTATGCAGCTTCCCAGGTTGCC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGGCAACCTGGGAAGCTaGATACATAGTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAGNLGS*IHSSSF
Trigger: GAAGGAGGAACTATGTATGCAGCTTCCCAGGTTGCC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGGCAACCTGGGAAGCTaGATACATAGTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIGNLGS*IHSSSF
Trigger: GAAGGAGGAACTATGTATGCAGCTTCCCAGGTTGCC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAATTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAACAGACAAATGGAGGTaGAAGGGGGATGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEETDKWR*KGDGLH
Trigger: GTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAACTTTCAACAGACAAATaGAGGTGGAAGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEELSTDK*RWKGDG
Trigger: ACCATCCCCCTTCCACCTCCATTTGTCTGTTGAAAG...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGCATACACAAGGTTTGTaGTTCTCAGAAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWHTQGL*FSEEFS
Trigger: TGAAAACTCTTCTGAGAACCACAAACCTTGTGTATG...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGGCCGAAATATTTGTTTaGATGCTGGTGATTCAGATT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKAEIFV*MLVIQI
Trigger: AATCTGAATCACCAGCATTCAAACAAATATTTCGGC...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCTAGCTAGAAATTGGTaGTTTGAGCACCAACAATAT +
Preference number: 4 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKLARNW*FEHQQY
Trigger: ATATTGTTGGTGCTCAAATCACCAATTTCTAGCTAG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGAAAGGACTGGGTGGTaGGGAAACATGAACTATGCA +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIERTGW*GNMNYA
Trigger: TGCATAGTTCATGTTTCCTCACCACCCAGTCCTTTC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAACTCACATATGTCCATaGTGTCAACCACACGGGCGG +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKETHICP*CQPHGR
Trigger: CCGCCCGTGTGGTTGACATCATGGACATATGTGAGT...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS-3UTR GCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGTGAGGTGTGTGTCCTaGAAAGTTTCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAVRCVS*KVSKCP
Trigger: GGGACACTTTGAAACTTTGCAGGACACACACCTCAC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGTGAGGTGTGTGTCCTaGAAAGTTTCAAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCVRCVS*KVSKCP
Trigger: GGGACACTTTGAAACTTTGCAGGACACACACCTCAC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTTTGGTAGTTCAGGTGTaGCTGCATCCATATGCACAG +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIILVVQV*LHPYAQ
Trigger: CTGTGCATATGGATGCAGCCACACCTGAACTACCAA...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTTTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTTTTTGGGTGAGGCAGTaGGAGAGGAATCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCFWVRQ*ERNPSV
Trigger: AACTGATGGATTCCTCTCCCACTGCCTCACCCAAAA...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGAACAGGGTCCCAAGTaGAAAAGAAAAGTTAACATA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFEQGPK*KRKVNI
Trigger: TATGTTAACTTTTCTTTTCCACTTGGGACCCTGTTC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCACGACACTCACCTATaGAGTGTCCAGACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIHDTHL*SVQTEN
Trigger: GTTTTCAGTCTGGACACTCCATAGGTGAGTGTCGTG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAACAGACAAATGGAGGTaGAAGGGGGATGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFATDKWR*KGDGLH
Trigger: GTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTCTTTCAACAGACAAATaGAGGTGGAAGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCLSTDK*RWKGDG
Trigger: ACCATCCCCCTTCCACCTCCATTTGTCTGTTGAAAG...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCATACACAAGGTTTGTaGTTCTCAGAAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFHTQGL*FSEEFS
Trigger: TGAAAACTCTTCTGAGAACCACAAACCTTGTGTATG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACCTTTCTGGGATCTTTaGCCCCAGGAGCTCATACAA +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEPFWDL*PQELIQ
Trigger: TTGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGCTTGGAGAATGTTGTaGCAAGCAACCAAATACTCA +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEAWRML*QATKYS
Trigger: TGAGTATTTGGTTGCTTGTCACAACATTCTCCAAGC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAATCCGTGGCTGTACATaGTTTGGAATCTGTTACTTG +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEIRGCT*FGICYL
Trigger: CAAGTAACAGATTCCAAAGCATGTACAGCCACGGAT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAAAGATCAAGCAAAACTaGCCAGGCAATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEKIKQN*PGNKVH
Trigger: GTGCACTTTATTGCCTGGGCAGTTTTGCTTGATCTT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCAGAGTCGATAAAGAATaGAAGTCTTTTGGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFRVDKE*KSFGSS
Trigger: TGAACTACCAAAAGACTTCCATTCTTTATCGACTCT...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTTGGCTGTACATGCTTTaGAATCTGTTACTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCWLYML*NLLLGE
Trigger: CTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCA...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAACTGGAGAACATCCGTaGCTGTACATGCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFATGEHP*LYMLWN
Trigger: ATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGT...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGAGGTGGAAGGGGGATaGTTTACACAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCEVEGG*FTQSIS
Trigger: GGAAATACTTTGTGTAAACCATCCCCCTTCCACCTC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATTCATAATTCTTTGGTaGGCAAGTCTGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAFIILW*ASLNCT
Trigger: GGTGCAGTTCAGACTTGCTCACCAAAGAATTATGAA...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTTTCATAATTCTTTGGTaGGCAAGTCTGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIFIILW*ASLNCT
Trigger: GGTGCAGTTCAGACTTGCTCACCAAAGAATTATGAA...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGTCACACACAATGAATaGCCAGGTGGAGATTTTATC +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIVTHNE*PGGDFI
Trigger: GATAAAATCTCCACCTGGTCATTCATTGTGTGTGAC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTATGGAGTGTCCAGACTaGAAACCTCTGAATAACACA +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCMECPD*KPLNNT
Trigger: TGTGTTATTCAGAGGTTTTCAGTCTGGACACTCCAT...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTGCTTGGAGAATGTTGTaGCAAGCAACCAAATACTCA +
Preference number: 4 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCAWRML*QATKYS
Trigger: TGAGTATTTGGTTGCTTGTCACAACATTCTCCAAGC...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACTTCATGACACACCATaGACACAGCTCACTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKELHDTP*TQLTSS
Trigger: GGAACTAGTGAGCTGTGTCCATGGTGTGTCATGAAG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCACAGACTGAAAACCTCTaGATAACACACACATTTGTG +
Preference number: 4 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAQTENL*ITHTFV
Trigger: CACAAATGTGTGTGTTATTCAGAGGTTTTCAGTCTG...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR GCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAAACATGAGACAACTGTaGTGTCTCACGAAGACACGA +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKENMRQL*CLTKTR
Trigger: TCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTT...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGAACAGGGTCCCAAGTaGAAAAGAAAAGTTAACATA +
Preference number: 4 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEEQGPK*KRKVNI
Trigger: TATGTTAACTTTTCTTTTCCACTTGGGACCCTGTTC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGCCGAAATATTTGTTTaGATGCTGGTGATTCAGATT +
Preference number: 4 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCAEIFV*MLVIQI
Trigger: AATCTGAATCACCAGCATTCAAACAAATATTTCGGC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCATACACAAGGTTTGTaGTTCTCAGAAGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIHTQGL*FSEEFS
Trigger: TGAAAACTCTTCTGAGAACCACAAACCTTGTGTATG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CCA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTAGAGTCGATAAAGAATaGAAGTCTTTTGGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIRVDKE*KSFGSS
Trigger: TGAACTACCAAAAGACTTCCATTCTTTATCGACTCT...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAAGCCGAAATATTTGTTTaGATGCTGGTGATTCAGATT +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEAEIFV*MLVIQI
Trigger: AATCTGAATCACCAGCATTCAAACAAATATTTCGGC...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR TCA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAATGCCTAGAATTTCCTTaGAAACGTTATGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IKSHTMNDQVEILSDYKECLEFP*KRYEEA
Trigger: AGCTTCTTCATAACGTTTTCAAGGAAATTCTAGGCA...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp GGCTCGCCCGGCCCACAGTGCCCGCACACCACGAGGCCCGCGCTCTaGCCACGTCCACGGCTACCTCCCCGAAGCCCCCAGGTCGCGACG +
Preference number: 5 (lower is better)
Translates to: GSPGPQCPHTTRPAL*PRPRLPPRSPQVAT
Trigger: CGTCGCGACCTGGGGGCTTCGGGGAGGTAGCCGTGGACGTGGGCAGAGCGCGGGCCTCGTGGTGTGCGGGCACTGTGGGCCGGGCGAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440320.5
ENST00000535335.1
CDS GCA 90 bp CTGCGCGCGCGTCGTCTGGGCCTGCGAAGTCCGGCGTGTGCATCGTaGAGGCCGGCCGGGAGCAACAAAGCGGCCGCGGGGCGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LRARRLGLRSPACAS*RPAGSNKAAAGREL
Trigger: GAGCTCACGCCCCGCGGCCGCTTTGTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 90 bp ATGTCAACTGCGCGCGCGTCGTCTGGGCCTGCGAAGTCCGGCGTGTaGATCGTGCAGGCCGGCCGGGAGCAACAAAGCGGCCGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: MSTARASSGPAKSGV*IVQAGREQQSGRGA
Trigger: CGCCCCGCGGCCGCTTTGTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCAGTTGACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 90 bp CTCACATATGTCCATGATGTCAACTGCGCGCGCGTCGTCTGGGCCTaGGAAGTCCGGCGTGTGCATCGTGCAGGCCGGCCGGGAGCAACA +
Preference number: 5 (lower is better)
Translates to: LTYVHDVNCARVVWA*EVRRVHRAGRPGAT
Trigger: TGTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCAGTTGACATCATGGACATATGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 90 bp TCAGGCAGAGGCTGGCATGCTCACCAGTGGGCTCCCCGGGCTCTCTaGAGAGGCGATTCTGTTCAGCTTGCCAACCTCTGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SGRGWHAHQWAPRAL*RGDSVQLANLCLPA
Trigger: GGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp GGGCTCTCTGCAGAGGCGATTCTGTTCAGCTTGCCAACCTCTGCCTaGCAGCCTGGGATCTTCTTGGTCGTCATGTGGCGCCGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GLSAEAILFSLPTSA*QPGIFLVVMWRRAC
Trigger: GCATGCCCGGCGCCACATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp CCAGTGGGCTCCCCGGGCTCTCTGCAGAGGCGATTCTGTTCAGCTTaGCAACCTCTGCCTGCCAGCCTGGGATCTTCTTGGTCGTCATGT +
Preference number: 5 (lower is better)
Translates to: PVGSPGSLQRRFCSA*QPLPASLGSSWSSC
Trigger: ACATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp TCCTGCATCCGGTCATTTTTGCAGACAGCGGGAGTCAGAGCTTATTaGCCTGAGTGTCCCGCTGACGCCCCTCCTCTGGCGTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SCIRSFLQTAGVRAY*PECPADAPPLASLG
Trigger: GCCCAGAGACGCCAGAGGAGGGGCGTCAGCGGGACACTCAGGCCAATAAGCTCTGACTCCCGCTGTCTGCAAAAATGACCGGATGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS-3UTR CAA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGCAGCCTGGGATCTTCTaGGTCGTCATGTGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LALPAFTCISPQLSCALVQPGIF*VVMWRR
Trigger: CCGGCGCCACATGACGACCAAGAAGATCCCAGGCTG...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS TCA 90 bp AAGTCTGAACTGCACCAGGCCACCCTGCCTGCTGGCCTTTGTCAGTaGGCAGCAGGCCACCAGACTTGTGCAAGCAGGGCTGACAGGACA +
Preference number: 5 (lower is better)
Translates to: KSELHQATLPAGLCQ*AAGHQTCASRADRT
Trigger: TGTCCTGTCAGCCCTGCTTGCACAAGTCTGGTGGCCTGCTGCTCACTGACAAAGGCCAGCAGGCAGGGTGGCCTGGTGCAGTTCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp CTCCTTCTCTGCTGTCAGAAAGCCGGCAATCTGGAGTCTGGATGGTaGGAAAGCAGGCAGCAGGGCTCTCCCCAGTGTGTCGGATCACGC +
Preference number: 5 (lower is better)
Translates to: LLLCCQKAGNLESGW*ESRQQGSPQCVGSR
Trigger: GCGTGATCCGACACACTGGGGAGAGCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp GATGTCCTAATGGACCTTTCAGGCAGAGGCTGGCATGCTCACCAGTaGGCTCCCCGGGCTCTCTGCAGAGGCGATTCTGTTCAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: DVLMDLSGRGWHAHQ*APRALCRGDSVQLA
Trigger: GGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAGGTCCATTAGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp CTCTCCGCGCCCCCGCTCAGAGCTCTGGCCACTACGGCAGAGGACTaGAGAACATCCGTGGCTGTACATGCTTTGGAATCTGTTACTTGG +
Preference number: 5 (lower is better)
Translates to: LSAPPLRALATTAED*RTSVAVHALESVTW
Trigger: CCAAGTAACAGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGTGGCCAGAGCTCTGAGCGGGGGCGCGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305883.6
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp TGCTCTTCTCCTTCTCTGCTGTCAGAAAGCCGGCAATCTGGAGTCTaGATGGTGGGAAAGCAGGCAGCAGGGCTCTCCCCAGTGTGTCGG +
Preference number: 5 (lower is better)
Translates to: CSSPSLLSESRQSGV*MVGKQAAGLSPVCR
Trigger: CCGACACACTGGGGAGAGCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGGCAAGGGGCAACAACTaGGTATTCCCGGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LALPAFTCISPQLSCALVARGNN*VFPAAM
Trigger: CATGGCTGCCGGGAATACCAAGTTGTTGCCCCTTGC...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp CAGAAGCTGCTCTTCTCCTTCTCTGCTGTCAGAAAGCCGGCAATCTaGAGTCTGGATGGTGGGAAAGCAGGCAGCAGGGCTCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: QKLLFSFSAVRKPAI*SLDGGKAGSRALPS
Trigger: ACTGGGGAGAGCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGCAGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCGCCTCCAAGCGTaGCCCCGCCTCCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWSRLQA*PRLQGS
Trigger: ACTGCCTTGGAGGCGGGGCAACGCTTGGAGGCGGGA...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535335.1
CDS CCA 90 bp AAAAATCCCATGAGTGATGTCCTAATGGACCTTTCAGGCAGAGGCTaGCATGCTCACCAGTGGGCTCCCCGGGCTCTCTGCAGAGGCGAT +
Preference number: 5 (lower is better)
Translates to: KNPMSDVLMDLSGRG*HAHQWAPRALCRGD
Trigger: ATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAGGTCCATTAGGACATCACTCATGGGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAATCACGCTAGTCCCCTaGGCCCTGCAGGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRITLVP*ALQGEL
Trigger: CAGCTCTCCCTGCAGGGCCAAGGGGACTAGCGTGAT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGACCTGCCTGCTGGCCTTaGTCAGTGAGCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRPACWP*SVSSRP
Trigger: TGGCCTGCTGCTCACTGACAAAGGCCAGCAGGCAGG...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGATCCCACGAACACAGGTaGAGGCGCTGGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRSHEHR*RRWSSL
Trigger: CAGGCTGCTCCAGCGCCTCAACCTGTGTTCGTGGGA...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCCGGCAGCCATGACATaGGCTGCACAGGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFPAAMT*AAQGAG
Trigger: GCCTGCCCCCTGTGCAGCCAATGTCATGGCTGCCGG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCCCATCCCAGCTGCAGTaGAAAGGCTTCTCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: ANKGSGILALPAFTCISPPSQLQ*KGFSPV
Trigger: CACAGGGGAGAAGCCTTTCAACTGCAGCTGGGATGG...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS TCA 90 bp AATGCGTCCTTGACCGGAGAGGTCGGAAAGCTGGCCGGTTCTAGGTaGCATTCCTGCATCCGGTCATTTTTGCAGACAGCGGGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: NASLTGEVGKLAGSR*HSCIRSFLQTAGVR
Trigger: TCTGACTCCCGCTGTCTGCAAAAATGACCGGATGCAGGAATGTCACCTAGAACCGGCCAGCTTTCCGACCTCTCCGGTCAAGGACGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS GCA 90 bp GAAAGCTGGCCGGTTCTAGGTGACATTCCTGCATCCGGTCATTTTTaGAGACAGCGGGAGTCAGAGCTTATTGGCCTGAGTGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ESWPVLGDIPASGHF*RQRESELIGLSVPL
Trigger: CAGCGGGACACTCAGGCCAATAAGCTCTGACTCCCGCTGTCTGCAAAAATGACCGGATGCAGGAATGTCACCTAGAACCGGCCAGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS-3UTR CAA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGATCACGCTAGTCCCCTaGGCCCTGCAGGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKITLVP*ALQGEL
Trigger: CAGCTCTCCCTGCAGGGCCAAGGGGACTAGCGTGAT...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCCCTGCCTGCTGGCCTTaGTCAGTGAGCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFPACWP*SVSSRP
Trigger: TGGCCTGCTGCTCACTGACAAAGGCCAGCAGGCAGG...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCTCCCACGAACACAGGTaGAGGCGCTGGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFSHEHR*RRWSSL
Trigger: CAGGCTGCTCCAGCGCCTCAACCTGTGTTCGTGGGA...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTTCCCACGAACACAGGTaGAGGCGCTGGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASSHEHR*RRWSSL
Trigger: CAGGCTGCTCCAGCGCCTCAACCTGTGTTCGTGGGA...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCAGCCTGGGATCTTCTaGGTCGTCATGTGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCQPGIF*VVMWRR
Trigger: CCGGCGCCACATGACGACCAAGAAGATCCCAGGCTG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp CAGGAGCTCATACAAACAAGAGCCTCGACAGCTTCCATGTCTGTCTaGTCCAAGATGCTGCAAGTAGACCTTTCGCTGTCATGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: QELIQTRASTASMSV*SKMLQVDLSLSCRF
Trigger: GAAGCGGCATGACAGCGAAAGGTCTACTTGCAGCATCTTGGAGCAGACAGACATGGAAGCTGTCGAGGCTCTTGTTTGTATGAGCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp CCTGCAAAGTTTCAAAGTGTCCCAGAAGCTGCTCTTCTCCTTCTCTaGTGTCAGAAAGCCGGCAATCTGGAGTCTGGATGGTGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PAKFQSVPEAALLLL*CQKAGNLESGWWES
Trigger: GCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGCAGCTTCTGGGACACTTTGAAACTTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp TCCGTGAGGTGTGTGTCCTGCAAAGTTTCAAAGTGTCCCAGAAGCTaGTCTTCTCCTTCTCTGCTGTCAGAAAGCCGGCAATCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SVRCVSCKVSKCPRS*SSPSLLSESRQSGV
Trigger: GACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGGAGAAGAGCAGCTTCTGGGACACTTTGAAACTTTGCAGGACACACACCTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp GACTGGAGAACATCCGTGGCTGTACATGCTTTGGAATCTGTTACTTaGGGAGAAACAGGTGTCCTTGTCGATGGCTCCACGAGATCAGGG +
Preference number: 5 (lower is better)
Translates to: DWRTSVAVHALESVT*GETGVLVDGSTRSG
Trigger: CCCTGATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CCA 90 bp CCACTACGGCAGAGGACTGGAGAACATCCGTGGCTGTACATGCTTTaGAATCTGTTACTTGGGGAGAAACAGGTGTCCTTGTCGATGGCT +
Preference number: 5 (lower is better)
Translates to: PLRQRTGEHPWLYML*NLLLGEKQVSLSMA
Trigger: AGCCATCGACAAGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305883.6
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTCCGGCAGCCATGACATaGGCTGCACAGGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIPAAMT*AAQGAG
Trigger: GCCTGCCCCCTGTGCAGCCAATGTCATGGCTGCCGG...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCACCGGCAGCCATGACATaGGCTGCACAGGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAPAAMT*AAQGAG
Trigger: GCCTGCCCCCTGTGCAGCCAATGTCATGGCTGCCGG...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTCCATCCCAGCTGCAGTaGAAAGGCTTCTCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPPSQLQ*KGFSPV
Trigger: CACAGGGGAGAAGCCTTTCAACTGCAGCTGGGATGG...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGCGATTCTGTTCAGCTaGCCAACCTCTGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFAILFS*PTSACQ
Trigger: CTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAGTATCAGTGGCTTCTaGAACACAGGTGGCCACATT +
Preference number: 5 (lower is better)
Translates to: ANKGSGILALPAFTCISPSISGF*NTGGHI
Trigger: AATGTGGCCACCTGTGTTCAAGAAGCCACTGATACT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TTGGCACTGCCTGCCTTCACATGCATCTCGCCCCAGCTAAGCTGTGCTCTGGTGATGTGTATGCTGATTTaGATGAGCAGGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LALPAFTCISPQLSCALVMCMLI*MSRRKD
Trigger: GTCCTTTCTCCTGCTCATCAAAATCAGCATACACAT...CACCAGAGCACAGCTTAGCTGGGGCGAGATGCATGTGAAGGCAGGCAGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp AAAGAATGGAAGTCTTTTGGTAGTTCAGGTGTGGCTGCATCCATATaGACAGTGGTGGTGACATCCCCAGAGTCAGAGACAGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KEWKSFGSSGVAASI*TVVVTSPESETGVR
Trigger: CCTCACGCCTGTCTCTGACTCTGGGGATGTCACCACCACTGTGCATATGGATGCAGCCACACCTGAACTACCAAAAGACTTCCATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAACCTTTCTGGGATCTTaGACCCCAGGAGCTCATACA +
Preference number: 5 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRTFLGS*TPGAHT
Trigger: TGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGGT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCAAGAATGGAAGTCTTTaGGTAGTTCAGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ANKGSGILALPAFTCISPKNGSL*VVQVWL
Trigger: CAGCCACACCTGAACTACCAAAAGACTTCCATTCTT...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAATCACGCTAGTCCCCTaGGCCCTGCAGGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEITLVP*ALQGEL
Trigger: CAGCTCTCCCTGCAGGGCCAAGGGGACTAGCGTGAT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp ATGTCTGTCTGCTCCAAGATGCTGCAAGTAGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATGGACTCACATATGTCCATGATGTCA +
Preference number: 5 (lower is better)
Translates to: MSVCSKMLQVDLSLS*RFLSRMDSHMSMMS
Trigger: TGACATCATGGACATATGTGAGTCCATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCTACTTGCAGCATCTTGGAGCAGACAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAGTTTTCGAGAAACAGGTGTCCTaGTCGATGGCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: EGSMPNPYTRFVVLRRVFEKQVS*SMAPRD
Trigger: ATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTC...GAAAACTCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTGAGAAACAGGTGTCCTaGTCGATGGCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASEKQVS*SMAPRD
Trigger: ATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTC...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCGAGAAACAGGTGTCCTaGTCGATGGCTCCACGAGAT +
Preference number: 5 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCEKQVS*SMAPRD
Trigger: ATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTC...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTCCTGCCTGCTGGCCTTaGTCAGTGAGCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCPACWP*SVSSRP
Trigger: TGGCCTGCTGCTCACTGACAAAGGCCAGCAGGCAGG...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 90 bp GACACCAAGTTAGTGCTGAGTAAACTGTCCGTGAGGTGTGTGTCCTaGAAAGTTTCAAAGTGTCCCAGAAGCTGCTCTTCTCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: DTKLVLSKLSVRCVS*KVSKCPRSCSSPSL
Trigger: CAGAGAAGGAGAAGAGCAGCTTCTGGGACACTTTGAAACTTTGCAGGACACACACCTCACGGACAGTTTACTCAGCACTAACTTGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTACCTTTCTGGGATCTTaGACCCCAGGAGCTCATACA +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASTFLGS*TPGAHT
Trigger: TGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGGT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGGTGGCTGTACATGCTTaGGAATCTGTTACTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWVAVHA*ESVTWG
Trigger: TCCCCAAGTAACAGATTCCAAAGCATGTACAGCCAC...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCCTGAGGGACACAGTTTaGGCTAGAGGTGATGAACAC +
Preference number: 5 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCLRDTV*ARGDEH
Trigger: GTGTTCATCACCTCTAGCCAAAACTGTGTCCCTCAG...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTGTGGCTGTACATGCTTaGGAATCTGTTACTTGGGGA +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASVAVHA*ESVTWG
Trigger: TCCCCAAGTAACAGATTCCAAAGCATGTACAGCCAC...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCGCCCCATTTTCATAATTCTTaGGTGAGCAAGTCTGAACTG +
Preference number: 5 (lower is better)
Translates to: ANKGSGILALPAFTCISPHFHNS*VSKSEL
Trigger: CAGTTCAGACTTGCTCACCAAAGAATTATGAAAATG...GGGCGAGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTGCAAGGGGCAACAACTaGGTATTCCCGGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCARGNN*VFPAAM
Trigger: CATGGCTGCCGGGAATACCAAGTTGTTGCCCCTTGC...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp GACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCATGTCATAATTGCGATTCTGTTCAGCTaGCCAACCTCTGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DLIHQNTGRTHITLHVIIAILFS*PTSACQ
Trigger: CTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGC...AATTATGACATGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATACTCAAAAGACCTTATCCACCAGAATACTGGCAGGACTCACATTACTTTGCAGCGATTCTGTTCAGCTaGCCAACCTCTGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ILKRPYPPEYWQDSHYFAAILFS*PTSACQ
Trigger: CTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGC...TGCAAAGTAATGTGAGTCCTGCCAGTATTCTGGTGGATAAGGTCTTTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AATGGCTTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAAGAAACTGAATGGCTaGCTTTCAGCAGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: NGLLSAEPWPRLLQTRSCKKLNG*LSAEPW
Trigger: CCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTT...GCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAAGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTAGTATCAGTGGCTTCTaGAACACAGGTGGCCACATT +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASSISGF*NTGGHI
Trigger: AATGTGGCCACCTGTGTTCAAGAAGCCACTGATACT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CCAGCTGAGGGCTCCATGCCGAATCCATACACAAGGTTTGTGGTTCTCAGAAGAATGTGTATGCTGATTTaGATGAGCAGGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: PAEGSMPNPYTRFVVLRRMCMLI*MSRRKD
Trigger: GTCCTTTCTCCTGCTCATCAAAATCAGCATACACAT...TCTTCTGAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGAAGAATGGAAGTCTTTaGGTAGTTCAGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKKNGSL*VVQVWL
Trigger: CAGCCACACCTGAACTACCAAAAGACTTCCATTCTT...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp CAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGTCCCTGGGATCTGCCCATCCATACACAAGGTTaGTGGTTCTCAGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: QDYYRLDPAASTGPWDLPIHTQG*WFSEEF
Trigger: AAACTCTTCTGAGAACCACAAACCTTGTGTATGGAT...GGGCAGATCCCAGGGACCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTACCTTTCTGGGATCTTaGACCCCAGGAGCTCATACA +
Preference number: 5 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCTFLGS*TPGAHT
Trigger: TGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGGT...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAGTGGCTGTACATGCTTaGGAATCTGTTACTTGGGGA +
Preference number: 5 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEVAVHA*ESVTWG
Trigger: TCCCCAAGTAACAGATTCCAAAGCATGTACAGCCAC...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGTACTGGCATTTTCATAATTCTTaGGTGAGCAAGTCTGAACTG +
Preference number: 5 (lower is better)
Translates to: SAEPWPRLLQTRSCSKYWHFHNS*VSKSEL
Trigger: CAGTTCAGACTTGCTCACCAAAGAATTATGAAAATG...CCAGTACTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAAGTATCAGTGGCTTCTaGAACACAGGTGGCCACATT +
Preference number: 5 (lower is better)
Translates to: KNVYADFDEQEKGLGGEESISGF*NTGGHI
Trigger: AATGTGGCCACCTGTGTTCAAGAAGCCACTGATACT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTATCCATACACAAGGTTaGTGGTTCTCAGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPIHTQG*WFSEEF
Trigger: AAACTCTTCTGAGAACCACAAACCTTGTGTATGGAT...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTATCCATACACAAGGTTaGTGGTTCTCAGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASIHTQG*WFSEEF
Trigger: AAACTCTTCTGAGAACCACAAACCTTGTGTATGGAT...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATTTGGCAAACAAAGGAAGCGGAATCTTGGCACTGCCTGCCTTCACATGCATCTCATTTTCATAATTCTTaGGTGAGCAAGTCTGAACTG +
Preference number: 5 (lower is better)
Translates to: IWQTKEAESWHCLPSHASHFHNS*VSKSEL
Trigger: CAGTTCAGACTTGCTCACCAAAGAATTATGAAAATG...AGATGCATGTGAAGGCAGGCAGTGCCAAGATTCCGCTTCCTTTGTTTGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTAAGAAACTGAATGGCTaGCTTTCAGCAGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCKKLNG*LSAEPW
Trigger: CCATGGCTCTGCTGAAAGCAAGCCATTCAGTTTCTT...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ACTATGCACAACATGAGACAACTGTGCTGTCTCACGAAGACACGACACTCACCTCCTACATTTATTCCATaGCCTGAACTTCCAATGTTT +
Preference number: 5 (lower is better)
Translates to: TMHNMRQLCCLTKTRHSPPTFIP*PELPMF
Trigger: AAACATTGGAAGTTCAGGCAATGGAATAAATGTAGG...AGGTGAGTGTCGTGTCTTCGTGAGACAGCACAGTTGTCTCATGTTGTGCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp TTGCTTTCAGCAGAGCCATGGCCAAGACTATTACAGACTAGATCCTGCAGCAAGCCTACATTTATTCCATaGCCTGAACTTCCAATGTTT +
Preference number: 5 (lower is better)
Translates to: LLSAEPWPRLLQTRSCSKPTFIP*PELPMF
Trigger: AAACATTGGAAGTTCAGGCAATGGAATAAATGTAGG...CTTGCTGCAGGATCTAGTCTGTAATAGTCTTGGCCATGGCTCTGCTGAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AACAGACAAATGGAGGTGGAAGGGGGATGGTTTACACAAAGTATTTCCAAATGTTTTGGAATCTGTTACTaGGGGAGAAACAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: NRQMEVEGGWFTQSISKCFGICY*GRNRCP
Trigger: AGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAA...ACATTTGGAAATACTTTGTGTAAACCATCCCCCTTCCACCTCCATTTGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTTTTGGAATCTGTTACTaGGGGAGAAACAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCFGICY*GRNRCP
Trigger: AGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAA...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAACTGAGGGACACAGTTTaGGCTAGAGGTGATGAACAC +
Preference number: 5 (lower is better)
Translates to: IKSHTMNDQVEILSDYKELRDTV*ARGDEH
Trigger: GTGTTCATCACCTCTAGCCAAAACTGTGTCCCTCAG...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAAATGTGTATGCTGATTTTGATGAGCAGGAGAAAGGACTGGGTGGTGAGGAAATGTGTATGCTGATTTaGATGAGCAGGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: KNVYADFDEQEKGLGGEEMCMLI*MSRRKD
Trigger: GTCCTTTCTCCTGCTCATCAAAATCAGCATACACAT...TTCCTCACCACCCAGTCCTTTCTCCTGCTCATCAAAATCAGCATACACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp ATCAAGTCACACACAATGAATGACCAGGTGGAGATTTTATCAGACTACAAAGAATTTGGAATCTGTTACTaGGGGAGAAACAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: IKSHTMNDQVEILSDYKEFGICY*GRNRCP
Trigger: AGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAA...TTCTTTGTAGTCTGATAAAATCTCCACCTGGTCATTCATTGTGTGTGACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS-3UTR CAA 90 bp AAAGGCAGTTGGGTAGTATTACTGCCATTTAGCGTAACTTGCATTTCCTTGTGTCCTACATTTATTCCATaGCCTGAACTTCCAATGTTT +
Preference number: 5 (lower is better)
Translates to: KGSWVVLLPFSVTCISLCPTFIP*PELPMF
Trigger: AAACATTGGAAGTTCAGGCAATGGAATAAATGTAGG...ACACAAGGAAATGCAAGTTACGCTAAATGGCAGTAATACTACCCAACTGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp CCCAGGTCGCGACGCTTAGGGCCCCCAACGCTCGCGTaGCGCGTTCCCGCCTCCAAGCGTTGCCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PRSRRLGPPTLA*RVPASKRCPAS
Trigger: GGAGGCGGGGCAACGCTTGGAGGCGGGAACGCGGCACGCGAGCGTTGGGGGCCCTAAGCGTCGCGACCTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440320.5
ENST00000535335.1
CDS GCA 72 bp CGTCGTCTGGGCCTGCGAAGTCCGGCGTGTGCATCGTaGAGGCCGGCCGGGAGCAACAAAGCGGCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: RRLGLRSPACAS*RPAGSNKAAAG
Trigger: CCCCGCGGCCGCTTTGTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 72 bp GCGCGCGCGTCGTCTGGGCCTGCGAAGTCCGGCGTGTaGATCGTGCAGGCCGGCCGGGAGCAACAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: ARASSGPAKSGV*IVQAGREQQSG
Trigger: GCCGCTTTGTTGCTCCCGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 72 bp GTCCATGATGTCAACTGCGCGCGCGTCGTCTGGGCCTaGGAAGTCCGGCGTGTGCATCGTGCAGGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: VHDVNCARVVWA*EVRRVHRAGRP
Trigger: CGGCCGGCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCAGTTGACATCATGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 72 bp TCCATGATGTCAACCGGCGCGGCCGCAGCGAAGCCCTaGACGCCCCACCTCCCGCATTTACAGGCGCGCGAG +
Preference number: 6 (lower is better)
Translates to: SMMSTGAAAAKP*TPHLPHLQARE
Trigger: CTCGCGCGCCTGTAAATGCGGGAGGTGGGGCGTGCAGGGCTTCGCTGCGGCCGCGCCGGTTGACATCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448523.5
ENST00000540845.5
CDS TCA 72 bp GGGCAAGGGGCAACAACTTGGTATTCCCGGCAGCCATaGCATTGGCTGCACAGGGGGCAGGCGGAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GQGATTWYSRQP*HWLHRGQAEGG
Trigger: CCCTCCCTCCGCCTGCCCCCTGTGCAGCCAATGTCATGGCTGCCGGGAATACCAAGTTGTTGCCCCTTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp CAACAACTTGGTATTCCCGGCAGCCATGACATTGGCTaGACAGGGGGCAGGCGGAGGGAGGGCTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: QQLGIPGSHDIG*TGGRRREGSLG
Trigger: CCCCAGGGAGCCCTCCCTCCGCCTGCCCCCTGTGCAGCCAATGTCATGGCTGCCGGGAATACCAAGTTGTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp GGCTGGCATGCTCACCAGTGGGCTCCCCGGGCTCTCTaGAGAGGCGATTCTGTTCAGCTTGCCAACCTCTGC +
Preference number: 6 (lower is better)
Translates to: GWHAHQWAPRAL*RGDSVQLANLC
Trigger: GCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp ACATATGTCCATGATGTCAACTGCGCGCGCGTCGTCTaGGCCTGCGAAGTCCGGCGTGTGCATCGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: TYVHDVNCARVV*ACEVRRVHRAG
Trigger: GCCTGCACGATGCACACGCCGGACTTCGCAGGCCCAGACGACGCGCGCGCAGTTGACATCATGGACATATGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305883.6
CDS GCA 72 bp TCCCCGGGCTCTCTGCAGAGGCGATTCTGTTCAGCTTaGCAACCTCTGCCTGCCAGCCTGGGATCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SPGSLQRRFCSA*QPLPASLGSSW
Trigger: CCAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAGAGCCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp ATGGACCTTTCAGGCAGAGGCTGGCATGCTCACCAGTaGGCTCCCCGGGCTCTCTGCAGAGGCGATTCTGTT +
Preference number: 6 (lower is better)
Translates to: MDLSGRGWHAHQ*APRALCRGDSV
Trigger: AACAGAATCGCCTCTGCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAGGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp CGGTCATTTTTGCAGACAGCGGGAGTCAGAGCTTATTaGCCTGAGTGTCCCGCTGACGCCCCTCCTCTGGCG +
Preference number: 6 (lower is better)
Translates to: RSFLQTAGVRAY*PECPADAPPLA
Trigger: CGCCAGAGGAGGGGCGTCAGCGGGACACTCAGGCCAATAAGCTCTGACTCCCGCTGTCTGCAAAAATGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS GCA 72 bp GCAGAGGCGATTCTGTTCAGCTTGCCAACCTCTGCCTaGCAGCCTGGGATCTTCTTGGTCGTCATGTGGCGC +
Preference number: 6 (lower is better)
Translates to: AEAILFSLPTSA*QPGIFLVVMWR
Trigger: GCGCCACATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp TGCTGTCAGAAAGCCGGCAATCTGGAGTCTGGATGGTaGGAAAGCAGGCAGCAGGGCTCTCCCCAGTGTGTC +
Preference number: 6 (lower is better)
Translates to: CCQKAGNLESGW*ESRQQGSPQCV
Trigger: GACACACTGGGGAGAGCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp CCTTCTCTGCTGTCAGAAAGCCGGCAATCTGGAGTCTaGATGGTGGGAAAGCAGGCAGCAGGGCTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: PSLLSESRQSGV*MVGKQAAGLSP
Trigger: TGGGGAGAGCCCTGCTGCCTGCTTTCCCACCATCCAGACTCCAGATTGCCGGCTTTCTGACAGCAGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp ATGAGTGATGTCCTAATGGACCTTTCAGGCAGAGGCTaGCATGCTCACCAGTGGGCTCCCCGGGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: MSDVLMDLSGRG*HAHQWAPRALC
Trigger: GCAGAGAGCCCGGGGAGCCCACTGGTGAGCATGCCAGCCTCTGCCTGAAAGGTCCATTAGGACATCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp CCCCCGCTCAGAGCTCTGGCCACTACGGCAGAGGACTaGAGAACATCCGTGGCTGTACATGCTTTGGAATCT +
Preference number: 6 (lower is better)
Translates to: PPLRALATTAED*RTSVAVHALES
Trigger: AGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGTGGCCAGAGCTCTGAGCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000305883.6
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp CTCTGCAGAGGCGATTCTGTTCAGCTTGCCAACCTCTaGCTGCCAGCCTGGGATCTTCTTGGTCGTCATGTG +
Preference number: 6 (lower is better)
Translates to: LCRGDSVQLANL*LPAWDLLGRHV
Trigger: CACATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAGGTTGGCAAGCTGAACAGAATCGCCTCTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS TCA 72 bp GTGAGCAGCAGGCCACCAGACTTGTGCAAGCAGGGCTaGCAGGACACCAAGTTAGTGCTGAGTAAACTGTCC +
Preference number: 6 (lower is better)
Translates to: VSSRPPDLCKQG*QDTKLVLSKLS
Trigger: GGACAGTTTACTCAGCACTAACTTGGTGTCCTGTCAGCCCTGCTTGCACAAGTCTGGTGGCCTGCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS TCA 72 bp TTGACCGGAGAGGTCGGAAAGCTGGCCGGTTCTAGGTaGCATTCCTGCATCCGGTCATTTTTGCAGACAGCG +
Preference number: 6 (lower is better)
Translates to: LTGEVGKLAGSR*HSCIRSFLQTA
Trigger: CGCTGTCTGCAAAAATGACCGGATGCAGGAATGTCACCTAGAACCGGCCAGCTTTCCGACCTCTCCGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS TCA 72 bp CTGTCATTCTCCCTTCGTCTCTTAGGAATGCGTCCTTaGCCGGAGAGGTCGGAAAGCTGGCCGGTTCTAGGT +
Preference number: 6 (lower is better)
Translates to: LSFSLRLLGMRP*PERSESWPVLG
Trigger: ACCTAGAACCGGCCAGCTTTCCGACCTCTCCGGTCAAGGACGCATTCCTAAGAGACGAAGGGAGAATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS CAA 72 bp TCTGTCATTCTCCCTTCGTCTCTTAGGAATGCGTCCTaGACCGGAGAGGTCGGAAAGCTGGCCGGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: SVILPSSLRNAS*TGEVGKLAGSR
Trigger: CCTAGAACCGGCCAGCTTTCCGACCTCTCCGGTCAAGGACGCATTCCTAAGAGACGAAGGGAGAATGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS CCA 72 bp CTCTGGCCACTACGGCAGAGGACTGGAGAACATCCGTaGCTGTACATGCTTTGGAATCTGTTACTTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LWPLRQRTGEHP*LYMLWNLLLGE
Trigger: CTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTCCTCTGCCGTAGTGGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305883.6
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CAA 90 bp AGGCGTGAGGGGTCTTATCCGCAACAGGTCACCTTTCTGGGATCTTaGACCCCAGGAGCTCATACAAACAAGAGCCTCGACAGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: RREGSYPQQVTFLGS*TPGAHTNKSLDSFH
Trigger: ATGGAAGCTGTCGAGGCTCTTGTTTGTATGAGCTCCTGGGGTCAAAGATCCCAGAAAGGTGACCTGTTGCGGATAAGACCCCTCACGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS TCA 72 bp GGTGTCCTTGTCGATGGCTCCACGAGATCAGGGCTCTaGGGAGGAGTTATGCACAGAGTCGATAAAGAATGG +
Preference number: 6 (lower is better)
Translates to: GVLVDGSTRSGL*GGVMHRVDKEW
Trigger: CCATTCTTTATCGACTCTGTGCATAACTCCTCCTCAGAGCCCTGATCTCGTGGAGCCATCGACAAGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp TGCTCCAAGATGCTGCAAGTAGACCTTTCGCTGTCATaGCGCTTCCTCTCCAGGATGGACTCACATATGTCC +
Preference number: 6 (lower is better)
Translates to: CSKMLQVDLSLS*RFLSRMDSHMS
Trigger: GGACATATGTGAGTCCATCCTGGAGAGGAAGCGGCATGACAGCGAAAGGTCTACTTGCAGCATCTTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp CCGGTTCTAGGTGACATTCCTGCATCCGGTCATTTTTaGAGACAGCGGGAGTCAGAGCTTATTGGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PVLGDIPASGHF*RQRESELIGLS
Trigger: ACTCAGGCCAATAAGCTCTGACTCCCGCTGTCTGCAAAAATGACCGGATGCAGGAATGTCACCTAGAACCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401510.5
CDS CCA 72 bp GGTAACATGCTACTTTGTCCAGTCACAGGGATCATCTaGCAAAGGACAGGGGGAGCAGGGACAGAGACAGAA +
Preference number: 6 (lower is better)
Translates to: GNMLLCPVTGII*QRTGGAGTETE
Trigger: TTCTGTCTCTGTCCCTGCTCCCCCTGTCCTTTGCCAGATGATCCCTGTGACTGGACAAAGTAGCATGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CAA 72 bp CTTTGGAATCTGTTACTTGGGGAGAAACAGGTGTCCTaGTCGATGGCTCCACGAGATCAGGGCTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LWNLLLGEKQVS*SMAPRDQGSEE
Trigger: CTCCTCAGAGCCCTGATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CAA 90 bp GGACTGGAGAACATCCGTGGCTGTACATGCTTTGGAATCTGTTACTaGGGGAGAAACAGGTGTCCTTGTCGATGGCTCCACGAGATCAGG +
Preference number: 6 (lower is better)
Translates to: GLENIRGCTCFGICY*GRNRCPCRWLHEIR
Trigger: CCTGATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTCCCCAAGTAACAGATTCCAAAGCATGTACAGCCACGGATGTTCTCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS TCA 72 bp GGTTTTCCTGGGCAGGTCATTTTCATAATTCTTTGGTaGGCAAGTCTGAACTGCACCAGGCCACCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: GFPGQVIFIILW*ASLNCTRPPCL
Trigger: CAGGCAGGGTGGCCTGGTGCAGTTCAGACTTGCTCACCAAAGAATTATGAAAATGACCTGCCCAGGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp ATCTGTTACTTGGGGAGAAACAGGTGTCCTTGTCGATaGCTCCACGAGATCAGGGCTCTGAGGAGGAGTTAT +
Preference number: 6 (lower is better)
Translates to: ICYLGRNRCPCR*LHEIRALRRSY
Trigger: ATAACTCCTCCTCAGAGCCCTGATCTCGTGGAGCCATCGACAAGGACACCTGTTTCTCCCCAAGTAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CAA 72 bp GGGTGGTTTTCCTGGGCAGGTCATTTTCATAATTCTTaGGTGAGCAAGTCTGAACTGCACCAGGCCACCCTG +
Preference number: 6 (lower is better)
Translates to: GWFSWAGHFHNS*VSKSELHQATL
Trigger: CAGGGTGGCCTGGTGCAGTTCAGACTTGCTCACCAAAGAATTATGAAAATGACCTGCCCAGGAAAACCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp AAGTCTTTTGGTAGTTCAGGTGTGGCTGCATCCATATaGACAGTGGTGGTGACATCCCCAGAGTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: KSFGSSGVAASI*TVVVTSPESET
Trigger: TGTCTCTGACTCTGGGGATGTCACCACCACTGTGCATATGGATGCAGCCACACCTGAACTACCAAAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp ATACAAACAAGAGCCTCGACAGCTTCCATGTCTGTCTaGTCCAAGATGCTGCAAGTAGACCTTTCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: IQTRASTASMSV*SKMLQVDLSLS
Trigger: TGACAGCGAAAGGTCTACTTGCAGCATCTTGGAGCAGACAGACATGGAAGCTGTCGAGGCTCTTGTTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5
CDS CCA 72 bp AAGGTGGGAACTTTTGAAGTAGGTCTTCCGGCAACCTaGGAAGCTGCATACATAGTTCCTCCTTCGGGAAAA +
Preference number: 6 (lower is better)
Translates to: KVGTFEVGLPAT*EAAYIVPPSGK
Trigger: TTTTCCCGAAGGAGGAACTATGTATGCAGCTTCCCAGGTTGCCGGAAGACCTACTTCAAAAGTTCCCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS GCA 72 bp TTAGTGCTGAGTAAACTGTCCGTGAGGTGTGTGTCCTaGAAAGTTTCAAAGTGTCCCAGAAGCTGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LVLSKLSVRCVS*KVSKCPRSCSS
Trigger: AGAAGAGCAGCTTCTGGGACACTTTGAAACTTTGCAGGACACACACCTCACGGACAGTTTACTCAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305883.6
ENST00000535335.1
ENST00000540845.5
CDS CAA 72 bp GAGTTATGCACAGAGTCGATAAAGAATGGAAGTCTTTaGGTAGTTCAGGTGTGGCTGCATCCATATGCACAG +
Preference number: 6 (lower is better)
Translates to: ELCTESIKNGSL*VVQVWLHPYAQ
Trigger: CTGTGCATATGGATGCAGCCACACCTGAACTACCAAAAGACTTCCATTCTTTATCGACTCTGTGCATAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305883.6
ENST00000401510.5
ENST00000440320.5
ENST00000448523.5
ENST00000535335.1
ENST00000540845.5