RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLF10 (Homo sapiens)

Ensembl gene IDs: ENSG00000155090

Ensembl transcript IDs: ENST00000285407.11, ENST00000395884.3

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTaGGGCCACAGACTTGCAGTGGAAGCATTTTTACATCACCACTGG +
Preference number: 1 (lower is better)
Translates to: GLRARLWGFCFKPTL*GHRLAVEAFLHHHW
Trigger: CCAGTGGTGATGTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR TCA 90 bp CATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATATTCTTaGAACCAGTGCTTTAGAAGAATCACATTGAAAAGTTGGTCTCAA +
Preference number: 1 (lower is better)
Translates to: HVCTVMFISFQPPYS*NQCFRRITLKSWSQ
Trigger: TTGAGACCAACTTTTCAATGTGATTCTTCTAAAGCACTGGTTTCAAGAATATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR TCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAAACCTGCCTTTCTGTaGCCTGCCTGTGGCCGAAGC +
Preference number: 2 (lower is better)
Translates to: PILWALLAIYSRSIPNIHKPAFL*PACGRS
Trigger: GCTTCGGCCACAGGCAGGTCACAGAAAGGCAGGTTT...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACTTCGTGCCAGGCTGTaGGGCTTCTGCTTTAAGCCC +
Preference number: 2 (lower is better)
Translates to: HFTSPCLYRNVYFLPASILRARL*GFCFKP
Trigger: GGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATATTTAAGCCCACGTTGTaGGGCCACAGACTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIFKPTL*GHRLAV
Trigger: CACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAA...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR TCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACTGTGCTACCTGTGTTaGCCTCATCTGAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: LILHLHVCTVMFISFQPPLCYLC*PHLKPS
Trigger: TGAAGGTTTCAGATGAGGTCAACACAGGTAGCACAG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACTGTGCTACCTGTGTTaGCCTCATCTGAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: HFTSPCLYRNVYFLPASILCYLC*PHLKPS
Trigger: TGAAGGTTTCAGATGAGGTCAACACAGGTAGCACAG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR GCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGTGGGGCCACAGACTTaGAGTGGAAGCATTTTTACA +
Preference number: 2 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAVGPQT*SGSIFT
Trigger: TGTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCAC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTTTTTACATCACCACTaGCTCCCGCTGAGACCAAAG +
Preference number: 2 (lower is better)
Translates to: PILWALLAIYSRSIPNIHFLHHH*LPLRPK
Trigger: CTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACGCCACAGACTTGCAGTaGAAGCATTTTTACATCACC +
Preference number: 2 (lower is better)
Translates to: PILWALLAIYSRSIPNIHATDLQ*KHFYIT
Trigger: GGTGATGTAAAAATGCTTCCACTGCAAGTCTGTGGC...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATCTACATCCACGATGTTaGCTGGAAAGACTAGGAATA +
Preference number: 2 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNLHPRC*LERLGI
Trigger: TATTCCTAGTCTTTCCAGTCAACATCGTGGATGTAG...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR CCA 72 bp GCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTaGGGCCACAGACTTGCAGTGGAAGCATTTTTACAT +
Preference number: 3 (lower is better)
Translates to: ARLWGFCFKPTL*GHRLAVEAFLH
Trigger: ATGTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CAA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATGCTTTAAGCCCACGTaGTGGGGCCACAGACTTGCA +
Preference number: 3 (lower is better)
Translates to: LILHLHVCTVMFISFQPPCFKPT*WGHRLA
Trigger: TGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR CCA 72 bp CACAGACTTGCAGTGGAAGCATTTTTACATCACCACTaGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTT +
Preference number: 3 (lower is better)
Translates to: HRLAVEAFLHHH*LPLRPKLVLTL
Trigger: AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACTGCAAGTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTGCTTTAAGCCCACGTaGTGGGGCCACAGACTTGCA +
Preference number: 3 (lower is better)
Translates to: PILWALLAIYSRSIPNIHCFKPT*WGHRLA
Trigger: TGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR GCA 72 bp CTTTCTCATCTCTCTTATGTGATAAGAAATGAAACCTaGCTTTCTGTGACCTGCCTGTGGCCGAAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LSHLSYVIRNET*LSVTCLWPKPF
Trigger: AAAGGGCTTCGGCCACAGGCAGGTCACAGAAAGGCAGGTTTCATTTCTTATCACATAAGAGAGATGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
3UTR-3UTR CAA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATGTGGGGCCACAGACTaGCAGTGGAAGCATTTTTAC +
Preference number: 3 (lower is better)
Translates to: LILHLHVCTVMFISFQPPCGATD*QWKHFY
Trigger: GTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTCTTTCCCCTACTTCCTaGGCTTGCGGGCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCLSPTS*ACGPPP
Trigger: GGGCGGGGGCCCGCAAGCTCAGGAAGTAGGGGAAAG...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTCAGGCGGGGCCTTCGTaGCAGGCTGTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCQAGPS*QAVGLL
Trigger: CAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTG...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTAGGCTGCTGGCTGCTTaGCCACAGACGGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCRLLAA*PQTGAR
Trigger: CCGTGCGCCCGTCTGTGGCCAAGCAGCCAGCAGCCT...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCAAACGGCTGGTaGCTGGCTGGGAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGANGW*LAGRSA
Trigger: AGCACTCCTCCCAGCCAGCCACCAGCCGTTTGCCCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGGGGAGATCCTAGCTaGCGGAGACCGACGGATGGG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGGDPS*RRPTDG
Trigger: CCCATCCGTCGGTCTCCGCCAGCTAGGATCTCCCCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTAGGGGGCGAGGCATGTaGACAAAGCGTGATCAGCGG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCRGRGM*TKRDQR
Trigger: CCGCTGATCACGCTTTGTTCACATGCCTCGCCCCCT...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTCAGGGAAAGAGAGCGTaGGCTGGGAAGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCQGKRA*AGKDRK
Trigger: CTTCCTGTCCTTCCCAGCTCACGCTCTCTTTCCCTG...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGAGGCTTTGAACTCTaGACAACGGGCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGGFEL*TTGWGT
Trigger: GGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGATGACCGGCATAGGTaGCACTCCCCCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCDDRHR*HSPCRY
Trigger: GTATCTGCAGGGGGAGTGCCACCTATGCCGGTCATC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGGGTACCACAAACATaGCAGCGCCTTTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGVPQT*QRLWGL
Trigger: AAGTCCCCAAAGGCGCTGTCATGTTTGTGGTACCCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGAAGGGGAACCATCTaGCAGATGACCGGCATAGGT +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGRGTI*QMTGIG
Trigger: ACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGGGGCAAACGGCTGGTaGCTGGCTGGGAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHGANGW*LAGRSA
Trigger: AGCACTCCTCCCAGCCAGCCACCAGCCGTTTGCCCC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGGTTCGCCTGTGTCTaGACAGTTCATCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGFACV*TVHQNG
Trigger: CCCGTTCTGATGAACTGTCCAGACACAGGCGAACCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGCAGATGACCGTCTCTaGGGAAGGCACAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCADDRL*GRHRKV
Trigger: GACTTTTCTGTGCCTTCCTCAGAGACGGTCATCTGC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGCTGGCTGCTTTCATTaGGCAGGTCTGGTGGTTACA +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCAGCFH*AGLVVT
Trigger: TGTAACCACCAGACCTGCCCAATGAAAGCAGCCAGC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTAGTTTGGTAGCTTCTTaGCTGATAGATGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCSLVAS*LIDGAG
Trigger: CCCGGCGCCATCTATCAGCCAAGAAGCTACCAAACT...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCACCACCGGAGGCTTTaGACTCTGCACAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHHHRRL*TLHNGL
Trigger: CAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGGGTGGCTACAGATGTaGCTCCTTATCCTTGATGAA +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCGWLQM*LLILDE
Trigger: TTCATCAAGGATAAGGAGTCACATCTGTAGCCACCC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATAAACCTGCCTTTCTGTaGCCTGCCTGTGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHKPAFL*PACGRS
Trigger: GCTTCGGCCACAGGCAGGTCACAGAAAGGCAGGTTT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTCTGTGCTACCTGTGTTaGCCTCATCTGAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCLCYLC*PHLKPS
Trigger: TGAAGGTTTCAGATGAGGTCAACACAGGTAGCACAG...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCATGTGAACAAAGCGTaGTCAGCGGCTGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHHVNKA*SAAAPG
Trigger: TCCCGGAGCAGCCGCTGATCACGCTTTGTTCACATG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATAGGTGGCACTCCCCCTaGAGATACTGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHRWHSP*RYCRWR
Trigger: TCTCCACCTGCAGTATCTGCAGGGGGAGTGCCACCT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCTTCGTGCCAGGCTGTaGGGCTTCTGCTTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHLRARL*GFCFKP
Trigger: GGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTTTTGGGGGCAGATACTaGGCTCTTTTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCFGGRY*ALFFLF
Trigger: AAAGAGGAAGAAAAGAGCCCAGTATCTGCCCCCAAA...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATTTCTTGGCTGATAGATaGCGCCGGGCATGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHFLADR*RRACLV
Trigger: GACCAAGCATGCCCGGCGCCATCTATCAGCCAAGAA...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGTTGAGGATGCTGGCTaGTTTCATTGGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHVEDAG*FHWAGL
Trigger: CAGACCTGCCCAATGAAAGCAGCCAGCATCCTCAAC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTCAGGCGGGGCCTTCGTaGCAGGCTGTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLQAGPS*QAVGLL
Trigger: CAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTG...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCTCTGCACAACGGGCTaGGGTACCACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHLCTTG*GTTNMT
Trigger: TGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTATAAAGTGCAGCACTTaGTTTCTCATCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCIKCST*FLINIC
Trigger: GCAGATGTTGATGAGAAAGCAAGTGCTGCACTTTAT...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATTTTGGATCTGTTTGGTaGCACAGCGGCACATGGTAT +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHFGSVW*HSGTWY
Trigger: ATACCATGTGCCGCTGTGTCACCAAACAGATCCAAA...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTGACACAGGGGCTGGCTaGGACCTGCAGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLDTGAG*DLQMTV
Trigger: GACGGTCATCTGCAGGTCTCAGCCAGCCCCTGTGTC...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCACCACCGGAGGCTTTaGACTCTGCACAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLHHRRL*TLHNGL
Trigger: CAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTG...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATAATCAATCTGAGGAGTaGCTTTTGCTGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHNQSEE*LLLLKG
Trigger: CCCCTTCAGCAGCAAAAGTCACTCCTCAGATTGATT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTAGAAAAGTCATAAAGTaGAGCACTTGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCRKVIK*STCFLI
Trigger: GATGAGAAAGCAAGTGCTGCACTTTATGACTTTTCT...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTTGGCTGCTAGGCTGCTaGCTGCTTGGCCACAGACGG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLWLLGC*LLGHRR
Trigger: CCGTCTGTGGCCAAGCAGCCAGCAGCCTAGCAGCCA...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285407.11
3UTR CAA 72 bp GCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTaGCAGTGGAAGCATTTTTACATCACCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ASALSPRCGATD*QWKHFYITTGS
Trigger: GGAGCCAGTGGTGATGTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTTGGAGTCAAACAAAATaGTGGGATTGTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: PGGAFVPGCGASALSPRCWSQTK*WDCMKI
Trigger: GATTTTCATACAATCCCAGCATTTTGTTTGACTCCA...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCGGTCTGTCACTGTGTaGGAGCAGGGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLRSVTV*EQGLEV
Trigger: TACCTCCAACCCCTGCTCCCACACAGTGACAGACCG...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCTGAGACCTGCAGATaGCCGTCTCTGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSAETCR*PSLRKA
Trigger: TGCCTTCCTCAGAGACGGTCATCTGCAGGTCTCAGC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTAAACCTGCCTTTCTGTaGCCTGCCTGTGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLKPAFL*PACGRS
Trigger: GCTTCGGCCACAGGCAGGTCACAGAAAGGCAGGTTT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCTACATCCACGATGTTaGCTGGAAAGACTAGGAATA +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHLHPRC*LERLGI
Trigger: TATTCCTAGTCTTTCCAGTCAACATCGTGGATGTAG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTAGGTGGCACTCCCCCTaGAGATACTGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLRWHSP*RYCRWR
Trigger: TCTCCACCTGCAGTATCTGCAGGGGGAGTGCCACCT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCTGGCTGGGAGGAGTaGTGGGAACGACTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSAGWEE*WERLLS
Trigger: TGACAACAGTCGTTCCCAGCACTCCTCCCAGCCAGC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGAGGCTTTGAACTCTaGACAACGGGCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSGGFEL*TTGWGT
Trigger: GGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGAGGCTGTGGGGCTTCTaGTTTAAGCCCACGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLRLWGF*FKPTLW
Trigger: CCACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCT...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTTCCTCCGCAGTCTGCTaGAGAGAGGCACCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLSSAVC*REAPKL
Trigger: CAACTTCGGTGCCTCTCTCCAGCAGACTGCGGAGGA...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCAATGGGAGAGAGTCTaGTGCCATTCGGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLQWERV*CHSGSP
Trigger: TGGTGAGCCCGAATGGCACCAGACTCTCTCCCATTG...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTTCTTCTCACCCGTGTaGGTTCGCCTGTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLFFSPV*VRLCLD
Trigger: GTCCAGACACAGGCGAACCCACACGGGTGAGAAGAA...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTCTTCGTGCCAGGCTGTaGGGCTTCTGCTTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSLRARL*GFCFKP
Trigger: GGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAG...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTCACGGGTGAGTCACTaGGAACATTCCTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSSRVSH*EHSSPL
Trigger: GAGCGGCGAGGAATGTTCCCAGTGACTCACCCGTGA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGGGTACCACAAACATaGCAGCGCCTTTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSGVPQT*QRLWGL
Trigger: AAGTCCCCAAAGGCGCTGTCATGTTTGTGGTACCCC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTAATGGTCACTCCTCATaGACCGCCGGTCACACATGG +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSNGHSS*TAGHTW
Trigger: CCATGTGTGACCGGCGGTTCATGAGGAGTGACCATT...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTAATGGTCACTCCTCATaGACCGCCGGTCACACATGG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLNGHSS*TAGHTW
Trigger: CCATGTGTGACCGGCGGTTCATGAGGAGTGACCATT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATATAAAGTGCAGCACTTaGTTTCTCATCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHIKCST*FLINIC
Trigger: GCAGATGTTGATGAGAAAGCAAGTGCTGCACTTTAT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGAAGGGGAACCATCTaGCAGATGACCGGCATAGGT +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSGRGTI*QMTGIG
Trigger: ACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCCGGCTGGTGGCTGGCTaGGAGGAGTGCTGGGAACGA +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPARLVAG*EECWER
Trigger: TCGTTCCCAGCACTCCTCCCAGCCAGCCACCAGCCG...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTGTGCGTCCTCGTGTaGGCCTTCAGATGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSVCVLV*AFRWEL
Trigger: AAGTTCCCATCTGAAGGCCCACACGAGGACGCACAC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGGGGAGGAAAGGGAGTaGGGCGCGAGGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAGEERE*GARQER
Trigger: CCTTTCCTGCCTCGCGCCCCACTCCCTTTCCTCCCC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTATCACACTTGTTGCCTaGGCTTTGGGGAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLITLVA*ALGSLG
Trigger: CCCCAAACTCCCCAAAGCTCAGGCAACAAGTGTGAT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACGACACAGGGGCTGGCTaGGACCTGCAGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHDTGAG*DLQMTV
Trigger: GACGGTCATCTGCAGGTCTCAGCCAGCCCCTGTGTC...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTGGAGAGACCAACACTaGCTTCTGTTGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSWRDQH*LLLWGH
Trigger: GTGTCCCCACAACAGAAGTCAGTGTTGGTCTCTCCA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAGAGGCGCAGGAAACGTaGACTGGGAATTGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIEAQET*TGNCRA
Trigger: GGCGCGGCAATTCCCAGTTCACGTTTCCTGCGCCTC...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATACGAGCCATTGCTCTTaGAATATCGCTAACAATATA +
Preference number: 4 (lower is better)
Translates to: GASALSPRCGATDLQWKHTSHCS*NIANNI
Trigger: TATATTGTTAGCGATATTTCAAGAGCAATGGCTCGT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTTGAGCATGGTTGGCTaGTTGGCCGCCGGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHLSMVG*LAAGGK
Trigger: CTTGCCGCCGGCGGCCAAGCAGCCAACCATGCTCAA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR GCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTTGAGGATGCTGGCTaGTTTCATTGGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSVEDAG*FHWAGL
Trigger: CAGACCTGCCCAATGAAAGCAGCCAGCATCCTCAAC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAGCGTGATCAGCGGCTaGTCCGGGAGGCGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHSVISG*SGRRRK
Trigger: TTTCCTGCGCCTCCCGGAGCAGCCGCTGATCACGCT...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAGAAGTTGAGCATGGTTaGCTGCTTGGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIEVEHG*LLGRRR
Trigger: CCGCCGGCGGCCAAGCAGCCAACCATGCTCAACTTC...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGATTGGGCAGGTCTGGTaGTTACATAGCTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLIGQVW*LHSWAS
Trigger: TGATGCCCAGCTATGTAACCACCAGACCTGCCCAAT...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTACCGCCGGTCACACATaGGGCACGCAAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLTAGHT*GTQISS
Trigger: AGAAGAAATTTGCGTGCCCCATGTGTGACCGGCGGT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTTTTAAGCCCACGTTGTaGGGCCACAGACTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLFKPTL*GHRLAV
Trigger: CACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAA...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAGCTGGCTGGGAGGAGTaGTGGGAACGACTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPAGWEE*WERLLS
Trigger: TGACAACAGTCGTTCCCAGCACTCCTCCCAGCCAGC...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTGGGAGAGAGTCTGGTaGCATTCGGGCTCACCACCG +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHWERVW*HSGSPP
Trigger: CGGTGGTGAGCCCGAATGGCACCAGACTCTCTCCCA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTGGGAGAGAGTCTGGTaGCATTCGGGCTCACCACCG +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAWERVW*HSGSPP
Trigger: CGGTGGTGAGCCCGAATGGCACCAGACTCTCTCCCA...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTATTGGGCAGGTCTGGTaGTTACATAGCTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSIGQVW*LHSWAS
Trigger: TGATGCCCAGCTATGTAACCACCAGACCTGCCCAAT...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAGATGACCGGCATAGGTaGCACTCCCCCTGCAGATAC +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPDDRHR*HSPCRY
Trigger: GTATCTGCAGGGGGAGTGCCACCTATGCCGGTCATC...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATCGGCTGGTGGCTGGCTaGGAGGAGTGCTGGGAACGA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNRLVAG*EECWER
Trigger: TCGTTCCCAGCACTCCTCCCAGCCAGCCACCAGCCG...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACGGTCTGTCACTGTGTaGGAGCAGGGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPRSVTV*EQGLEV
Trigger: TACCTCCAACCCCTGCTCCCACACAGTGACAGACCG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTTTTTACATCACCACTaGCTCCCGCTGAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLFLHHH*LPLRPK
Trigger: CTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAA...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGAGAGGCACCGAAGTTaGGCATGGTTGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAERHRS*AWLAAW
Trigger: CCAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAGCTGAGACCTGCAGATaGCCGTCTCTGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIAETCR*PSLRKA
Trigger: TGCCTTCCTCAGAGACGGTCATCTGCAGGTCTCAGC...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTGGGTGGCTACAGATGTaGCTCCTTATCCTTGATGAA +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLGWLQM*LLILDE
Trigger: TTCATCAAGGATAAGGAGTCACATCTGTAGCCACCC...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACTTTCCTCCGCAGTCTaGTGGAGAGAGGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASILSSAV*WREAPK
Trigger: CTTCGGTGCCTCTCTCCAGCAGACTGCGGAGGAAAG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR GCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACGAATCACACTTGTTaGCTGAGCTTTGGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLTNHTC*LSFGEF
Trigger: AAACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGT...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAAGGCTGTGGGGCTTCTaGTTTAAGCCCACGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPRLWGF*FKPTLW
Trigger: CCACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCT...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAGCAGGAAACGTGAACTaGGAATTGCCGCGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIAGNVN*ELPRRH
Trigger: GTGACGGCGCGGCAATTCCCAGTTCACGTTTCCTGC...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGCGGAGACCGACGGATaGGGCCGCCCTAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNAETDG*GRPNLN
Trigger: ATTGAGGTTAGGGCGGCCCCATCCGTCGGTCTCCGC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTTATGTAAGCTGCAATaGACAGCGCGCGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSLCKLQ*TARVCV
Trigger: TACACACACGCGCGCTGTCCATTGCAGCTTACATAA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGCAGATTCTCTTCCTCTaGCAAATCAGATACTGGTGT +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLQILFL*QIRYWC
Trigger: ACACCAGTATCTGATTTGTCAGAGGAAGAGAATCTG...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAAATGAGGCTCACGGGTaGGTCACTGGGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPNEAHG*VTGNIP
Trigger: AGGAATGTTCCCAGTGACTCACCCGTGAGCCTCATT...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTTGCTCACTTCCATCTaGCAGTTTGGTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSLLTSI*QFGSFL
Trigger: CAAGAAGCTACCAAACTGGCAGATGGAAGTGAGCAA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACGCCTTTATGTAAGCTaGAATGGACAGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPRLYVS*NGQRAC
Trigger: ACACGCGCGCTGTCCATTGCAGCTTACATAAAGGCG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACGGCTGGGAGGAGTGCTaGGAACGACTGTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHGWEEC*ERLLSQ
Trigger: TTGTGACAACAGTCGTTCCCAGCACTCCTCCCAGCC...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACTCTGCACAACGGGCTaGGGTACCACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPLCTTG*GTTNMT
Trigger: TGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACCAATGGGAGAGAGTCTaGTGCCATTCGGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHQWERV*CHSGSP
Trigger: TGGTGAGCCCGAATGGCACCAGACTCTCTCCCATTG...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAACCGCCGGTCACACATaGGGCACGCAAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPTAGHT*GTQISS
Trigger: AGAAGAAATTTGCGTGCCCCATGTGTGACCGGCGGT...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAATCACACTTGTTGCCTaGGCTTTGGGGAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIITLVA*ALGSLG
Trigger: CCCCAAACTCCCCAAAGCTCAGGCAACAAGTGTGAT...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACGCAGATGACCGTCTCTaGGGAAGGCACAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHADDRL*GRHRKV
Trigger: GACTTTTCTGTGCCTTCCTCAGAGACGGTCATCTGC...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTGGAGAGACCAACACTaGCTTCTGTTGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHWRDQH*LLLWGH
Trigger: GTGTCCCCACAACAGAAGTCAGTGTTGGTCTCTCCA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTCAGCCTCCATATTCTTaGAACCAGTGCTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLQPPYS*NQCFRR
Trigger: TCTTCTAAAGCACTGGTTTCAAGAATATGGAGGCTG...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTATAAGAAATGAAACCTaGCTTTCTGTGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLIRNET*LSVTCL
Trigger: CAGGCAGGTCACAGAAAGGCAGGTTTCATTTCTTAT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGCTGGCTGCTTTCATTaGGCAGGTCTGGTGGTTACA +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAAGCFH*AGLVVT
Trigger: TGTAACCACCAGACCTGCCCAATGAAAGCAGCCAGC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTGTGTGGGCCTTCAGATaGGAACTTTTAAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLVWAFR*ELLKYV
Trigger: GACATACTTTAAAAGTTCCCATCTGAAGGCCCACAC...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAGTTTGGTAGCTTCTTaGCTGATAGATGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHSLVAS*LIDGAG
Trigger: CCCGGCGCCATCTATCAGCCAAGAAGCTACCAAACT...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATATGGGCATCAGCTGTATaGCGAATCACACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIWASAV*RITLVA
Trigger: GGCAACAAGTGTGATTCGTCATACAGCTGATGCCCA...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATTTGGATCTGTTTGGTaGCACAGCGGCACATGGTAT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPFGSVW*HSGTWY
Trigger: ATACCATGTGCCGCTGTGTCACCAAACAGATCCAAA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTTCATTGGGCAGGTCTaGTGGTTACATAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHFIGQV*WLHSWA
Trigger: TGCCCAGCTATGTAACCACCAGACCTGCCCAATGAA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGCCTCAACATTTAGGTaGGTTCTTCTTCTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLASTFR*VLLLKE
Trigger: TTCTTTTAGAAGAAGAACCCACCTAAATGTTGAGGC...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGGCTGGGAGGAGTGCTaGGAACGACTGTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNGWEEC*ERLLSQ
Trigger: TTGTGACAACAGTCGTTCCCAGCACTCCTCCCAGCC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGTGTGCGTCCTCGTGTaGGCCTTCAGATGGGAACTT +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNVCVLV*AFRWEL
Trigger: AAGTTCCCATCTGAAGGCCCACACGAGGACGCACAC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGGGTTCGCCTGTGTCTaGACAGTTCATCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNGFACV*TVHQNG
Trigger: CCCGTTCTGATGAACTGTCCAGACACAGGCGAACCC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTTCTTCTCACCCGTGTaGGTTCGCCTGTGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNFFSPV*VRLCLD
Trigger: GTCCAGACACAGGCGAACCCACACGGGTGAGAAGAA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTTCTTGGCTGATAGATaGCGCCGGGCATGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNFLADR*RRACLV
Trigger: GACCAAGCATGCCCGGCGCCATCTATCAGCCAAGAA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAAAGAGAGCGTGAGCTaGGAAGGACAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHKESVS*EGQEGK
Trigger: TTTCCCTTCCTGTCCTTCCCAGCTCACGCTCTCTTT...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR TCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCCCAACTGCAGCTCATTaGCATAAGTGCTTCTACAGC +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAPTAAH*HKCFYS
Trigger: GCTGTAGAAGCACTTATGTCAATGAGCTGCAGTTGG...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACCAACTGCAGCTCATTaGCATAAGTGCTTCTACAGC +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIPTAAH*HKCFYS
Trigger: GCTGTAGAAGCACTTATGTCAATGAGCTGCAGTTGG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATGGTGCCATCAGATTTaGCACTTGAGAGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPWCHQI*HLRGFK
Trigger: TTTGAACCCTCTCAAGTGTCAAATCTGATGGCACCA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTGGAGTCAAACAAAATaGTGGGATTGTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLWSQTK*WDCMKI
Trigger: GATTTTCATACAATCCCAGCATTTTGTTTGACTCCA...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATTGCTCACTTCCATCTaGCAGTTTGGTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPLLTSI*QFGSFL
Trigger: CAAGAAGCTACCAAACTGGCAGATGGAAGTGAGCAA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATTTGGGGGCAGATACTaGGCTCTTTTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPFGGRY*ALFFLF
Trigger: AAAGAGGAAGAAAAGAGCCCAGTATCTGCCCCCAAA...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTTTTTACATCACCACTaGCTCCCGCTGAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAFLHHH*LPLRPK
Trigger: CTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAA...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAGCCACAGACTTGCAGTaGAAGCATTTTTACATCACC +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPATDLQ*KHFYIT
Trigger: GGTGATGTAAAAATGCTTCCACTGCAAGTCTGTGGC...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAAATGCTGGGATTGTATaGAAATCAGGTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASINAGIV*KSGVPG
Trigger: TCCGGGAACACCTGATTTTCATACAATCCCAGCATT...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTGGGCATCAGCTGTATaGCGAATCACACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNWASAV*RITLVA
Trigger: GGCAACAAGTGTGATTCGTCATACAGCTGATGCCCA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACTTGATGAATCAATCTaGGGAGTGACTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPLDESI*GVTFAA
Trigger: AGCAGCAAAAGTCACTCCTCAGATTGATTCATCAAG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAATAAGAAATGAAACCTaGCTTTCTGTGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPIRNET*LSVTCL
Trigger: CAGGCAGGTCACAGAAAGGCAGGTTTCATTTCTTAT...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTAGTCAAACAAAATGCTaGGATTGTATGAAAATCAGG +
Preference number: 4 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLSQTKC*DCMKIR
Trigger: CCTGATTTTCATACAATCCCAGCATTTTGTTTGACT...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTTCATTGGGCAGGTCTaGTGGTTACATAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNFIGQV*WLHSWA
Trigger: TGCCCAGCTATGTAACCACCAGACCTGCCCAATGAA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGCCACAGACTTGCAGTaGAAGCATTTTTACATCACC +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAATDLQ*KHFYIT
Trigger: GGTGATGTAAAAATGCTTCCACTGCAAGTCTGTGGC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCCAGATTCTCTTCCTCTaGCAAATCAGATACTGGTGT +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPAQILFL*QIRYWC
Trigger: ACACCAGTATCTGATTTGTCAGAGGAAGAGAATCTG...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCAATTGTTCTGATAGTTaGGGATGCTGGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPANCSDS*GCWLLS
Trigger: TGAAAGCAGCCAGCATCCTCAACTATCAGAACAATT...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAATCAATCTGAGGAGTaGCTTTTGCTGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNNQSEE*LLLLKG
Trigger: CCCCTTCAGCAGCAAAAGTCACTCCTCAGATTGATT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATCTGTGCTACCTGTGTTaGCCTCATCTGAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNLCYLC*PHLKPS
Trigger: TGAAGGTTTCAGATGAGGTCAACACAGGTAGCACAG...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACAGCCTCCATATTCTTaGAACCAGTGCTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIQPPYS*NQCFRR
Trigger: TCTTCTAAAGCACTGGTTTCAAGAATATGGAGGCTG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACCTACATCCACGATGTTaGCTGGAAAGACTAGGAATA +
Preference number: 4 (lower is better)
Translates to: PILWALLAIYSRSIPNIHLHPRC*LERLGI
Trigger: TATTCCTAGTCTTTCCAGTCAACATCGTGGATGTAG...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAATGATGCCTTCGTGTTaGAATCCTAAGAAAACGAGC +
Preference number: 4 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIMMPSC*NPKKTS
Trigger: GCTCGTTTTCTTAGGATTTCAACACGAAGGCATCAT...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR GCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGTGGGGCCACAGACTTaGAGTGGAAGCATTTTTACA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNVGPQT*SGSIFT
Trigger: TGTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCAC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAATGCTGGGATTGTATaGAAATCAGGTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNNAGIV*KSGVPG
Trigger: TCCGGGAACACCTGATTTTCATACAATCCCAGCATT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR TCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTGGTGCCATCAGATTTaGCACTTGAGAGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNWCHQI*HLRGFK
Trigger: TTTGAACCCTCTCAAGTGTCAAATCTGATGGCACCA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR GCA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCAAGAAAAGTCATAAAGTaGAGCACTTGCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LILHLHVCTVMFISFQPPRKVIK*STCFLI
Trigger: GATGAGAAAGCAAGTGCTGCACTTTATGACTTTTCT...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCAGGATTCCAATTCTTTaGGCCCTCTTAGCAATATAC +
Preference number: 4 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPARIPIL*ALLAIY
Trigger: GTATATTGCTAAGAGGGCCCAAAGAATTGGAATCCT...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CCA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAGGATTCCAATTCTTTaGGCCCTCTTAGCAATATAC +
Preference number: 4 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNRIPIL*ALLAIY
Trigger: GTATATTGCTAAGAGGGCCCAAAGAATTGGAATCCT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 90 bp GAGACCGACGGATGGGGCCGCCCTAACCTCAATGAGGCTCACGGGTaGGTCACTGGGAACATTCCTCGCCGCTCGCACGTCCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: ETDGWGRPNLNEAHG*VTGNIPRRSHVPAP
Trigger: GGGCGCGGGGACGTGCGAGCGGCGAGGAATGTTCCCAGTGACTCACCCGTGAGCCTCATTGAGGTTAGGGCGGCCCCATCCGTCGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS GCA 90 bp GGGCGAGGAGGGGGCGAGGCATGTGAACAAAGCGTGATCAGCGGCTaGTCCGGGAGGCGCAGGAAACGTGAACTGGGAATTGCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: GRGGGEACEQSVISG*SGRRRKRELGIAAP
Trigger: CGGCGCGGCAATTCCCAGTTCACGTTTCCTGCGCCTCCCGGAGCAGCCGCTGATCACGCTTTGTTCACATGCCTCGCCCCCTCCTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS CCA 90 bp TTCCTCCGCAGTCTGCTGGAGAGAGGCACCGAAGTTGAGCATGGTTaGCTGCTTGGCCGCCGGCGGCAAGCTGACTGGCTGCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FLRSLLERGTEVEHG*LLGRRRQADWLLGC
Trigger: GCAGCCTAGCAGCCAGTCAGCTTGCCGCCGGCGGCCAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTCTCCAGCAGACTGCGGAGGAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CAA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTGTGTGGGAGCAGGGGTaGGAGGTAGAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: PGGAFVPGCGASALSPRCVWEQG*EVEQCH
Trigger: ATGACATTGCTCTACCTCCAACCCCTGCTCCCACAC...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS GCA 90 bp GAGAGTCTGGTGCCATTCGGGCTCACCACCGGAGGCTTTGAACTCTaGACAACGGGCTGGGGTACCACAAACATGACAGCGCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ESLVPFGLTTGGFEL*TTGWGTTNMTAPLG
Trigger: CCCCAAAGGCGCTGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 90 bp CCATTCGGGCTCACCACCGGAGGCTTTGAACTCTGCACAACGGGCTaGGGTACCACAAACATGACAGCGCCTTTGGGGACTTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: PFGLTTGGFELCTTG*GTTNMTAPLGTCVP
Trigger: GGGCACACAAGTCCCCAAAGGCGCTGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTTGCTGGGAACGACTGTaGTCACAACAGGGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: PGGAFVPGCGASALSPRCCWERL*SQQGCW
Trigger: CCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCA...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 90 bp AATGGGAGAGAGTCTGGTGCCATTCGGGCTCACCACCGGAGGCTTTaGACTCTGCACAACGGGCTGGGGTACCACAAACATGACAGCGCC +
Preference number: 5 (lower is better)
Translates to: NGRESGAIRAHHRRL*TLHNGLGYHKHDSA
Trigger: GGCGCTGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTCTCTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTCACATTTGGATCTGTTaGGTGACACAGCGGCACATG +
Preference number: 5 (lower is better)
Translates to: PGGAFVPGCGASALSPRCHIWIC*VTQRHM
Trigger: CATGTGCCGCTGTGTCACCAAACAGATCCAAATGTG...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTTATGACGAATCACACTaGTTGCCTGAGCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: PGGAFVPGCGASALSPRCYDESH*LPELWG
Trigger: TCCCCAAAGCTCAGGCAACAAGTGTGATTCGTCATA...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAGGCGGGGCCTTCGTGCCAGGCTGTGGGGCTTCTGCTTTAAGCCCACGTTGTTCTGTGCTACCTGTGTaGACCTCATCTGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: PGGAFVPGCGASALSPRCSVLPV*TSSETF
Trigger: GAAGGTTTCAGATGAGGTCAACACAGGTAGCACAGA...ACAACGTGGGCTTAAAGCAGAAGCCCCACAGCCTGGCACGAAGGCCCCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 90 bp ACGACTGTTGTCACAACAGGGTTGTTGGCAGGAAGGGGAACCATCTaGCAGATGACCGGCATAGGTGGCACTCCCCCTGCAGATACTGCA +
Preference number: 5 (lower is better)
Translates to: TTVVTTGLLAGRGTI*QMTGIGGTPPADTA
Trigger: TGCAGTATCTGCAGGGGGAGTGCCACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAACAGTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 90 bp AACCGCCGGTCACACATGGGGCACGCAAATTTCTTCTCACCCGTGTaGGTTCGCCTGTGTCTGGACAGTTCATCAGAACGGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: NRRSHMGHANFFSPV*VRLCLDSSSERANL
Trigger: GAGGTTTGCCCGTTCTGATGAACTGTCCAGACACAGGCGAACCCACACGGGTGAGAAGAAATTTGCGTGCCCCATGTGTGACCGGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATAGAGAGGCACCGAAGTaGAGCATGGTTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHREAPK*SMVGCL
Trigger: CAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTCT...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGTCACAACAGGGTTGTaGGCAGGAAGGGGAACCATC +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHVTTGL*AGRGTI
Trigger: GATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGAC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACCCTACTTCCTGAGCTaGCGGGCCCCCGCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: LILHLHVCTVMFISFQPPPYFLS*RAPARA
Trigger: GGCGCGGGCGGGGGCCCGCAAGCTCAGGAAGTAGGG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATCACATTTGGATCTGTTaGGTGACACAGCGGCACATG +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHHIWIC*VTQRHM
Trigger: CATGTGCCGCTGTGTCACCAAACAGATCCAAATGTG...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS GCA 90 bp GGGGTTGGAGGTAGAGCAATGTCATTTAGCTTGCTCACTTCCATCTaGCAGTTTGGTAGCTTCTTGGCTGATAGATGGCGCCGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GVGGRAMSFSLLTSI*QFGSFLADRWRRAC
Trigger: GCATGCCCGGCGCCATCTATCAGCCAAGAAGCTACCAAACTGGCAGATGGAAGTGAGCAAGCTAAATGACATTGCTCTACCTCCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGCAATGTCATTTAGCTaGCTCACTTCCATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHAMSFS*LTSICQ
Trigger: CTGGCAGATGGAAGTGAGCAAGCTAAATGACATTGC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGTATCTGAGAGTGACTaGAAGTGTACAGTAGATGGC +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHVSESD*KCTVDG
Trigger: GCCATCTACTGTACACTTCAAGTCACTCTCAGATAC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTGCTGGCTGCTTTCATaGGGCAGGTCTGGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLCWLLS*GRSGGY
Trigger: GTAACCACCAGACCTGCCCAATGAAAGCAGCCAGCA...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATGTGTTTCTCTCACATTaGGATCTGTTTGGTGACACA +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHVFLSH*DLFGDT
Trigger: TGTGTCACCAAACAGATCCAAATGTGAGAGAAACAC...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GGGGCTTCTGCTTTAAGCCCACGTTGTGGGGCCACAGACTTGCAGTGGAAGCATTGTGACTCCTTATCCTaGATGAATCAATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GASALSPRCGATDLQWKHCDSLS*MNQSEE
Trigger: CTCCTCAGATTGATTCATCAAGGATAAGGAGTCACA...ATGCTTCCACTGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTTGTCACAACAGGGTaGTTGGCAGGAAGGGGAACC +
Preference number: 5 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSVVTTG*LAGRGT
Trigger: GGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAAC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGACTCTTGTTGTCACAACAGGGTaGTTGGCAGGAAGGGGAACC +
Preference number: 5 (lower is better)
Translates to: AFLHHHWLPLRPKLVLTLVVTTG*LAGRGT
Trigger: GGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAAC...AAGAGTCAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTAGCGCCTTTGGGGACTaGTGTGCCCATGAACACAAC +
Preference number: 5 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSSAFGD*CAHEHN
Trigger: GTTGTGTTCATGGGCACACAAGTCCCCAAAGGCGCT...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGTGTGGGAGCAGGGGTaGGAGGTAGAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSVWEQG*EVEQCH
Trigger: ATGACATTGCTCTACCTCCAACCCCTGCTCCCACAC...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTGCTTTAAGCCCACGTaGTGGGGCCACAGACTTGCA +
Preference number: 5 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSCFKPT*WGHRLA
Trigger: TGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAGCATGGTTGGCTGCTaGGCCGCCGGCGGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNSMVGC*AAGGKL
Trigger: CAGCTTGCCGCCGGCGGCCAAGCAGCCAACCATGCT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS-3UTR CAA 90 bp AGTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTTGTGGGGCCACAGACTaGCAGTGGAAGCATTTTTAC +
Preference number: 5 (lower is better)
Translates to: SGSIFTSPLAPAETKVSSCGATD*QWKHFY
Trigger: GTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACA...AGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATATCACCACCGGAGGCTTaGAACTCTGCACAACGGGCT +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASISPPEA*NSAQRA
Trigger: AGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGA...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACAGTTTGGTAGCTTCTaGGCTGATAGATGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LILHLHVCTVMFISFQPPQFGSF*ADRWRR
Trigger: CCGGCGCCATCTATCAGCCAAGAAGCTACCAAACTG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAAACGTGAACTGGGAATaGCCGCGCCGTCACCTTTCC +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASINVNWE*PRRHLS
Trigger: GGAAAGGTGACGGCGCGGCAATTCCCAGTTCACGTT...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTGCTGGCTGCTTTCATaGGGCAGGTCTGGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: PILWALLAIYSRSIPNIHCWLLS*GRSGGY
Trigger: GTAACCACCAGACCTGCCCAATGAAAGCAGCCAGCA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGTGTTTCTCTCACATTaGGATCTGTTTGGTGACACA +
Preference number: 5 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLVFLSH*DLFGDT
Trigger: TGTGTCACCAAACAGATCCAAATGTGAGAGAAACAC...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACAGTTTGGTAGCTTCTaGGCTGATAGATGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIQFGSF*ADRWRR
Trigger: CCGGCGCCATCTATCAGCCAAGAAGCTACCAAACTG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp GTGGAAGCATTTTTACATCACCACTGGCTCCCGCTGAGACCAAAGTTAGTTCTGGAGGATTCCAATTCTTaGGGCCCTCTTAGCAATATA +
Preference number: 5 (lower is better)
Translates to: VEAFLHHHWLPLRPKLVLEDSNS*GPLSNI
Trigger: TATATTGCTAAGAGGGCCCAAAGAATTGGAATCCTC...CAGAACTAACTTTGGTCTCAGCGGGAGCCAGTGGTGATGTAAAAATGCTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 90 bp ATCAACATCTGCCACTGTGTTTCTCTCACATTTGGATCTGTTTGGTaGCACAGCGGCACATGGTATGTTCTTTCTTGCAGCCTCAACATT +
Preference number: 5 (lower is better)
Translates to: INICHCVSLTFGSVW*HSGTWYVLSCSLNI
Trigger: AATGTTGAGGCTGCAAGAAAGAACATACCATGTGCCGCTGTGTCACCAAACAGATCCAAATGTGAGAGAAACACAGTGGCAGATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTCACCACCGGAGGCTTaGAACTCTGCACAACGGGCT +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNSPPEA*NSAQRA
Trigger: AGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACGACGAATCACACTTGTaGCCTGAGCTTTGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: PILWALLAIYSRSIPNIHDESHL*PELWGV
Trigger: AACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGTC...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CAAACTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCGACGAATCACACTTGTaGCCTGAGCTTTGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: QTHFTSPCLYRNVYFLPADESHL*PELWGV
Trigger: AACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGTC...GGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGTCACAACAGGGTTGTaGGCAGGAAGGGGAACCATC +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNVTTGL*AGRGTI
Trigger: GATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGAC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAGCGCCTTTGGGGACTaGTGTGCCCATGAACACAAC +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNSAFGD*CAHEHN
Trigger: GTTGTGTTCATGGGCACACAAGTCCCCAAAGGCGCT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATAACATGACAGCGCCTTaGGGGACTTGTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNNMTAP*GTCVPM
Trigger: CATGGGCACACAAGTCCCCAAAGGCGCTGTCATGTT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CTCATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCACTTCCATCTGCCAGTTaGGTAGCTTCTTGGCTGATA +
Preference number: 5 (lower is better)
Translates to: LILHLHVCTVMFISFQPPLPSAS*VASWLI
Trigger: TATCAGCCAAGAAGCTACCAAACTGGCAGATGGAAG...TGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATATGTGGGGCCACAGACTaGCAGTGGAAGCATTTTTAC +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASICGATD*QWKHFY
Trigger: GTAAAAATGCTTCCACTGCAAGTCTGTGGCCCCACA...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTGCTTTAAGCCCACGTaGTGGGGCCACAGACTTGCA +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNCFKPT*WGHRLA
Trigger: TGCAAGTCTGTGGCCCCACAACGTGGGCTTAAAGCA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATACTGGTGCCATCAGATTaGACACTTGAGAGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASILVPSD*TLERVQ
Trigger: TTGAACCCTCTCAAGTGTCAAATCTGATGGCACCAG...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTGCTGGGAACGACTGTaGTCACAACAGGGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNCWERL*SQQGCW
Trigger: CCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACCTTCCATCTGCCAGTTaGGTAGCTTCTTGGCTGATA +
Preference number: 5 (lower is better)
Translates to: PILWALLAIYSRSIPNIHLPSAS*VASWLI
Trigger: TATCAGCCAAGAAGCTACCAAACTGGCAGATGGAAG...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACACTGTCCAGACTCGTTaGGTCAAAGTAGAGATTGTG +
Preference number: 5 (lower is better)
Translates to: PILWALLAIYSRSIPNIHTVQTR*VKVEIV
Trigger: CACAATCTCTACTTTGACCAAACGAGTCTGGACAGT...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATCTGGTGCCATCAGATTaGACACTTGAGAGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNLVPSD*TLERVQ
Trigger: TTGAACCCTCTCAAGTGTCAAATCTGATGGCACCAG...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTATGACGAATCACACTaGTTGCCTGAGCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNYDESH*LPELWG
Trigger: TCCCCAAAGCTCAGGCAACAAGTGTGATTCGTCATA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CCAATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACTGTGACTCCTTATCCTaGATGAATCAATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: PILWALLAIYSRSIPNIHCDSLS*MNQSEE
Trigger: CTCCTCAGATTGATTCATCAAGGATAAGGAGTCACA...GTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATGCAATGTCATTTAGCTaGCTCACTTCCATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNAMSFS*LTSICQ
Trigger: CTGGCAGATGGAAGTGAGCAAGCTAAATGACATTGC...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATTCTGTGCTACCTGTGTaGACCTCATCTGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNSVLPV*TSSETF
Trigger: GAAGGTTTCAGATGAGGTCAACACAGGTAGCACAGA...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp CATTTTACATCTCCATGTCTGTACCGTAATGTTTATTTCCTTCCAGCCTCCATAGAGGATTCCAATTCTTaGGGCCCTCTTAGCAATATA +
Preference number: 5 (lower is better)
Translates to: HFTSPCLYRNVYFLPASIEDSNS*GPLSNI
Trigger: TATATTGCTAAGAGGGCCCAAAGAATTGGAATCCTC...TATGGAGGCTGGAAGGAAATAAACATTACGGTACAGACATGGAGATGTAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS-3UTR CAA 90 bp ATTCTTTGGGCCCTCTTAGCAATATACAGTCGTTCAATTCCAAATATTCACAATACTACATCCACGATGTaGACTGGAAAGACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: ILWALLAIYSRSIPNIHNTTSTM*TGKTRN
Trigger: ATTCCTAGTCTTTCCAGTCAACATCGTGGATGTAGT...ATTGTGAATATTTGGAATTGAACGACTGTATATTGCTAAGAGGGCCCAAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 72 bp GGATGGGGCCGCCCTAACCTCAATGAGGCTCACGGGTaGGTCACTGGGAACATTCCTCGCCGCTCGCACGTC +
Preference number: 6 (lower is better)
Translates to: GWGRPNLNEAHG*VTGNIPRRSHV
Trigger: GACGTGCGAGCGGCGAGGAATGTTCCCAGTGACTCACCCGTGAGCCTCATTGAGGTTAGGGCGGCCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS CCA 72 bp AGTCTGCTGGAGAGAGGCACCGAAGTTGAGCATGGTTaGCTGCTTGGCCGCCGGCGGCAAGCTGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: SLLERGTEVEHG*LLGRRRQADWL
Trigger: CAGCCAGTCAGCTTGCCGCCGGCGGCCAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTCTCCAGCAGACT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS GCA 72 bp GGGGGCGAGGCATGTGAACAAAGCGTGATCAGCGGCTaGTCCGGGAGGCGCAGGAAACGTGAACTGGGAATT +
Preference number: 6 (lower is better)
Translates to: GGEACEQSVISG*SGRRRKRELGI
Trigger: AATTCCCAGTTCACGTTTCCTGCGCCTCCCGGAGCAGCCGCTGATCACGCTTTGTTCACATGCCTCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395884.3
CDS CCA 72 bp GGGAAAACCCAGGAGCAGGGGCAATGGGAGAGAGTCTaGTGCCATTCGGGCTCACCACCGGAGGCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: GKTQEQGQWERV*CHSGSPPEALN
Trigger: GTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTCTCTCCCATTGCCCCTGCTCCTGGGTTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 90 bp ATTTCCATTCTTTCCTCCGCAGTCTGCTGGAGAGAGGCACCGAAGTaGAGCATGGTTGGCTGCTTGGCCGCCGGCGGCAAGCTGACTGGC +
Preference number: 6 (lower is better)
Translates to: ISILSSAVCWREAPK*SMVGCLAAGGKLTG
Trigger: GCCAGTCAGCTTGCCGCCGGCGGCCAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTCTCCAGCAGACTGCGGAGGAAAGAATGGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS CAA 90 bp GGCAAACGGCTGGTGGCTGGCTGGGAGGAGTGCTGGGAACGACTGTaGTCACAACAGGGTTGTTGGCAGGAAGGGGAACCATCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: GKRLVAGWEECWERL*SQQGCWQEGEPSGR
Trigger: TCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCACTCCTCCCAGCCAGCCACCAGCCGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS GCA 72 bp GTGCCATTCGGGCTCACCACCGGAGGCTTTGAACTCTaGACAACGGGCTGGGGTACCACAAACATGACAGCG +
Preference number: 6 (lower is better)
Translates to: VPFGLTTGGFEL*TTGWGTTNMTA
Trigger: CGCTGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 72 bp AGGAAGGGGAACCATCTGGCAGATGACCGGCATAGGTaGCACTCCCCCTGCAGATACTGCAGGTGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: RKGNHLADDRHR*HSPCRYCRWRD
Trigger: GTCTCTCCACCTGCAGTATCTGCAGGGGGAGTGCCACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 72 bp GTCACAACAGGGTTGTTGGCAGGAAGGGGAACCATCTaGCAGATGACCGGCATAGGTGGCACTCCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: VTTGLLAGRGTI*QMTGIGGTPPA
Trigger: TGCAGGGGGAGTGCCACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 90 bp TGGCTGGGAGGAGTGCTGGGAACGACTGTTGTCACAACAGGGTTGTaGGCAGGAAGGGGAACCATCTGGCAGATGACCGGCATAGGTGGC +
Preference number: 6 (lower is better)
Translates to: WLGGVLGTTVVTTGL*AGRGTIWQMTGIGG
Trigger: GCCACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCACTCCTCCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 90 bp GGCTGGCTGGGAGGAGTGCTGGGAACGACTGTTGTCACAACAGGGTaGTTGGCAGGAAGGGGAACCATCTGGCAGATGACCGGCATAGGT +
Preference number: 6 (lower is better)
Translates to: GWLGGVLGTTVVTTG*LAGRGTIWQMTGIG
Trigger: ACCTATGCCGGTCATCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCACTCCTCCCAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 72 bp GAGTCTGGTGCCATTCGGGCTCACCACCGGAGGCTTTaGACTCTGCACAACGGGCTGGGGTACCACAAACAT +
Preference number: 6 (lower is better)
Translates to: ESGAIRAHHRRL*TLHNGLGYHKH
Trigger: ATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS GCA 72 bp AAAACCCAGGAGCAGGGGCAATGGGAGAGAGTCTGGTaGCATTCGGGCTCACCACCGGAGGCTTTGAACTCT +
Preference number: 6 (lower is better)
Translates to: KTQEQGQWERVW*HSGSPPEALNS
Trigger: AGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTCTCTCCCATTGCCCCTGCTCCTGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 72 bp CTCACCACCGGAGGCTTTGAACTCTGCACAACGGGCTaGGGTACCACAAACATGACAGCGCCTTTGGGGACT +
Preference number: 6 (lower is better)
Translates to: LTTGGFELCTTG*GTTNMTAPLGT
Trigger: AGTCCCCAAAGGCGCTGTCATGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp GGAGTGCTGGGAACGACTGTTGTCACAACAGGGTTGTaGGCAGGAAGGGGAACCATCTGGCAGATGACCGGC +
Preference number: 6 (lower is better)
Translates to: GVLGTTVVTTGL*AGRGTIWQMTG
Trigger: GCCGGTCATCTGCCAGATGGTTCCCCTTCCTGCCAACAACCCTGTTGTGACAACAGTCGTTCCCAGCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp AGAGTCTGGTGCCATTCGGGCTCACCACCGGAGGCTTaGAACTCTGCACAACGGGCTGGGGTACCACAAACA +
Preference number: 6 (lower is better)
Translates to: RVWCHSGSPPEA*NSAQRAGVPQT
Trigger: TGTTTGTGGTACCCCAGCCCGTTGTGCAGAGTTCAAAGCCTCCGGTGGTGAGCCCGAATGGCACCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp ATAGCTGGGCATCAGCTGTATGACGAATCACACTTGTaGCCTGAGCTTTGGGGAGTTTGGGGGCAGATACTG +
Preference number: 6 (lower is better)
Translates to: IAGHQLYDESHL*PELWGVWGQIL
Trigger: CAGTATCTGCCCCCAAACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGTCATACAGCTGATGCCCAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CCA 72 bp CAGCTGTATGACGAATCACACTTGTTGCCTGAGCTTTaGGGAGTTTGGGGGCAGATACTGGGCTCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QLYDESHLLPEL*GVWGQILGSFL
Trigger: AAGAAAAGAGCCCAGTATCTGCCCCCAAACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGTCATACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp TACATAGCTGGGCATCAGCTGTATGACGAATCACACTaGTTGCCTGAGCTTTGGGGAGTTTGGGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: YIAGHQLYDESH*LPELWGVWGQI
Trigger: TATCTGCCCCCAAACTCCCCAAAGCTCAGGCAACAAGTGTGATTCGTCATACAGCTGATGCCCAGCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp CAATGTCATTTAGCTTGCTCACTTCCATCTGCCAGTTaGGTAGCTTCTTGGCTGATAGATGGCGCCGGGCAT +
Preference number: 6 (lower is better)
Translates to: QCHLACSLPSAS*VASWLIDGAGH
Trigger: ATGCCCGGCGCCATCTATCAGCCAAGAAGCTACCAAACTGGCAGATGGAAGTGAGCAAGCTAAATGACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp TTCACTTTCCGGTCTGTCACTGTGTGGGAGCAGGGGTaGGAGGTAGAGCAATGTCATTTAGCTTGCTCACTT +
Preference number: 6 (lower is better)
Translates to: FTFRSVTVWEQG*EVEQCHLACSL
Trigger: AAGTGAGCAAGCTAAATGACATTGCTCTACCTCCAACCCCTGCTCCCACACAGTGACAGACCGGAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS GCA 72 bp GGTAGAGCAATGTCATTTAGCTTGCTCACTTCCATCTaGCAGTTTGGTAGCTTCTTGGCTGATAGATGGCGC +
Preference number: 6 (lower is better)
Translates to: GRAMSFSLLTSI*QFGSFLADRWR
Trigger: GCGCCATCTATCAGCCAAGAAGCTACCAAACTGGCAGATGGAAGTGAGCAAGCTAAATGACATTGCTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS TCA 72 bp TGCCACTGTGTTTCTCTCACATTTGGATCTGTTTGGTaGCACAGCGGCACATGGTATGTTCTTTCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: CHCVSLTFGSVW*HSGTWYVLSCS
Trigger: GCTGCAAGAAAGAACATACCATGTGCCGCTGTGTCACCAAACAGATCCAAATGTGAGAGAAACACAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 90 bp TCTCATCAACATCTGCCACTGTGTTTCTCTCACATTTGGATCTGTTaGGTGACACAGCGGCACATGGTATGTTCTTTCTTGCAGCCTCAA +
Preference number: 6 (lower is better)
Translates to: SHQHLPLCFSHIWIC*VTQRHMVCSFLQPQ
Trigger: TTGAGGCTGCAAGAAAGAACATACCATGTGCCGCTGTGTCACCAAACAGATCCAAATGTGAGAGAAACACAGTGGCAGATGTTGATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp CATCTGCCACTGTGTTTCTCTCACATTTGGATCTGTTaGGTGACACAGCGGCACATGGTATGTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: HLPLCFSHIWIC*VTQRHMVCSFL
Trigger: CAAGAAAGAACATACCATGTGCCGCTGTGTCACCAAACAGATCCAAATGTGAGAGAAACACAGTGGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp TTCTCATCAACATCTGCCACTGTGTTTCTCTCACATTaGGATCTGTTTGGTGACACAGCGGCACATGGTATG +
Preference number: 6 (lower is better)
Translates to: FSSTSATVFLSH*DLFGDTAAHGM
Trigger: CATACCATGTGCCGCTGTGTCACCAAACAGATCCAAATGTGAGAGAAACACAGTGGCAGATGTTGATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp CTGAGGAAGGCACAGAAAAGTCATAAAGTGCAGCACTaGCTTTCTCATCAACATCTGCCACTGTGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: LRKAQKSHKVQH*LSHQHLPLCFS
Trigger: AGAGAAACACAGTGGCAGATGTTGATGAGAAAGCAAGTGCTGCACTTTATGACTTTTCTGTGCCTTCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285407.11
ENST00000395884.3
CDS CAA 72 bp TCTCTGCAGTTTTGTTCCAGGAATACATACTCTCTTTaGGCCTTTCAGAAATCATTTCCATTCTTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: SLQFCSRNTYSL*AFQKSFPFFPP
Trigger: CGGAGGAAAGAATGGAAATGATTTCTGAAAGGCCAAAAGAGAGTATGTATTCCTGGAACAAAACTGCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285407.11
CDS CAA 72 bp TCTCTGCAGTTTTGTTCCAGGAATACATACTCTCTTTaGGCCTTTCAGAAATCATTTCCATTCTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SLQFCSRNTYSL*AFQKSFPFFPP
Trigger: TGGAGGAAAGAATGGAAATGATTTCTGAAAGGCCAAAAGAGAGTATGTATTCCTGGAACAAAACTGCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395884.3