RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000137171

Ensembl transcript IDs: ENST00000259708.7, ENST00000347162.10, ENST00000394056.6, ENST00000453940.6, ENST00000458460.6, ENST00000460283.1, ENST00000463168.1, ENST00000467906.5, ENST00000468114.1, ENST00000469987.1, ENST00000470728.5, ENST00000472172.1, ENST00000472792.1, ENST00000479388.5, ENST00000479632.5, ENST00000481499.5, ENST00000481888.1, ENST00000486439.1

Found 976 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGTGTACAGAGCA +
Preference number: 1 (lower is better)
Translates to: EPVACRLIPLPQHQA*HPGLGDLARSVYRA
Trigger: TGCTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp AGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGACATCCTGGCCTGGGGGACCTTGCCC +
Preference number: 1 (lower is better)
Translates to: RISSWLSRWPAGSSR*PNTRPDILAWGTLP
Trigger: GGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp CTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTGACATC +
Preference number: 1 (lower is better)
Translates to: LTSRVLPRISSWLSR*PAGSSRCPNTRPDI
Trigger: GATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp TCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACC +
Preference number: 1 (lower is better)
Translates to: SSPWLTSRVLPRISS*LSRWPAGSSRCPNT
Trigger: GGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp CAGCAGAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGC +
Preference number: 1 (lower is better)
Translates to: QQREGVRAARARQLG*PAPNPLTEKPAAGC
Trigger: GCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR GCA 90 bp TGCCGGGCCTTCTCATGCACCAGCCCTTCCTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGG +
Preference number: 1 (lower is better)
Translates to: CRAFSCTSPSSWPPC*RHSMVWDRLCSTAW
Trigger: CCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp AGCTGCCGGGCCTTCTCATGCACCAGCCCTTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCC +
Preference number: 1 (lower is better)
Translates to: SCRAFSCTSPSSWPP*CRHSMVWDRLCSTA
Trigger: GGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp CTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGC +
Preference number: 1 (lower is better)
Translates to: LCSTAWCSLRRASSP*LTSRVLPRISSWLS
Trigger: GCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp ACCAGCCCTTCCTCATGGCCTCCCTGCTGCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCC +
Preference number: 1 (lower is better)
Translates to: TSPSSWPPCCRHSMV*DRLCSTAWCSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp AGGGCCGAGGCTCAGTCCCCTGGAGCTTCCTCACCAAGAGTTCACTaGTTCTGCGGAGCACATCCCGGATCTTGCCAAGAGAGCCACTCC +
Preference number: 1 (lower is better)
Translates to: RAEAQSPGASSPRVH*FCGAHPGSCQESHS
Trigger: GGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 90 bp GCCTCACTCAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACCAGCCCTTCCTCATGGCCTCCCTGC +
Preference number: 1 (lower is better)
Translates to: ASLSPSSMFSIERRS*RAFSCTSPSSWPPC
Trigger: GCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGTTCACTGCTTCTGCGGAGCACATCC +
Preference number: 1 (lower is better)
Translates to: AARFMLLLEGRGSVP*SFLTKSSLLLRSTS
Trigger: GGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR CCA 90 bp TGCTGCAGACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGT +
Preference number: 1 (lower is better)
Translates to: CCRHSMVWDRLCSTA*CSLRRASSPWLTSR
Trigger: ACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp GGCCCTGGCTGTGGCACTCAGGCCAGAGCACGGAAGAAACTGTTCTaGAGCCAGAGAGTCAGAGGATCTGCCCTGCCCAAAGTCCAGAAG +
Preference number: 1 (lower is better)
Translates to: GPGCGTQARARKKLF*SQRVRGSALPKVQK
Trigger: CTTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTGCTCTGGCCTGAGTGCCACAGCCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp CATGCACCAGCCCTTCCTCATGGCCTCCCTGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTA +
Preference number: 1 (lower is better)
Translates to: HAPALPHGLPAADTQ*SGTGFAARPGVHCV
Trigger: TACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp GAGGCTCAGTCCCCTGGAGCTTCCTCACCAAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCTTGCCAAGAGAGCCACTCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: EAQSPGASSPRVHCF*GAHPGSCQESHSSA
Trigger: TGCAGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 90 bp AGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGGCCTCCCTGCTGCAGACACTCAATG +
Preference number: 1 (lower is better)
Translates to: SSMFSIERRSCRAFS*TSPSSWPPCCRHSM
Trigger: CATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp CACGGAAGAAACTGTTCTGCAGCCAGAGAGTCAGAGGATCTGCCCTaGCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTTCACCA +
Preference number: 1 (lower is better)
Translates to: HGRNCSAARESEDLP*PKSRSPAFPPLLSP
Trigger: TGGTGAAAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 90 bp CAGAGCACGGAAGAAACTGTTCTGCAGCCAGAGAGTCAGAGGATCTaGCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTT +
Preference number: 1 (lower is better)
Translates to: QSTEETVLQPESQRI*PAQSPEVQRSHPFF
Trigger: AAAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 90 bp CCAAGCAGCTCTGCCACCTTCGTCTGGCTGATAGGGTCAGTGCCCTaGAAGGAAAAGGAAGGACCTGGGACTTCCTACTCCTTAACTCCT +
Preference number: 1 (lower is better)
Translates to: PSSSATFVWLIGSVP*KEKEGPGTSYSLTP
Trigger: AGGAGTTAAGGAGTAGGAAGTCCCAGGTCCTTCCTTTTCCTTCCAGGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGAGCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469987.1
3UTR TCA 90 bp CTTCCTTATACTTATTCTGGTCACGATACACCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAGGGTGGCCACGGCCTGATGTGCGCT +
Preference number: 1 (lower is better)
Translates to: LPYTYSGHDTPKQGC*AWWRHQGGHGLMCA
Trigger: AGCGCACATCAGGCCGTGGCCACCCTGATGTCGCCACCATGCTCAACATCCTTGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 90 bp TCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTaGCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCTT +
Preference number: 1 (lower is better)
Translates to: SLSLRELRIIRITGQ*LEERTSYASFLSTL
Trigger: AAGGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
3UTR-3UTR GCA 90 bp CAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCTCCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: QPCAPQDLLLAEPVACRLPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...GAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 2 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR TCA 90 bp CTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LCSTAWCSLRRASSPWLTGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...GGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR GCA 90 bp CAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCTCTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 2 (lower is better)
Translates to: QPCAPQDLLLAEPVACRLSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...GAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp CTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 2 (lower is better)
Translates to: LCSTAWCSLRRASSPWLTSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...GGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR GCA 90 bp GTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCTCTGAGGGCCATACCTaGTTTGTACCCACCTTGGGG +
Preference number: 2 (lower is better)
Translates to: VPCLRDRRAHSSRVSAASSEGHT*FVPTLG
Trigger: CCCCAAGGTGGGTACAAAGCAGGTATGGCCCTCAGA...GGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATCTGAGGGCCATACCTaGTTTGTACCCACCTTGGGG +
Preference number: 2 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQSEGHT*FVPTLG
Trigger: CCCCAAGGTGGGTACAAAGCAGGTATGGCCCTCAGA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR GCA 90 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SPSSMFSIERRSCRAFSCAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...GCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp GTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: VPCLRDRRAHSSRVSAASPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...GGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp GCAGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 2 (lower is better)
Translates to: ADLGAGLNVSCLKRGPWCVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR TCA 90 bp GACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTACCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: DTQWSGTGFAARPGVHCVPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...TACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR GCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 2 (lower is better)
Translates to: YPPWGLRASYSRGPQGAERPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CTCCCTGCTGCAGACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: LPAADTQWSGTGFAARPGRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...ACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR TCA 90 bp AGTGTGGCAGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SVAATAGWSGPKVLSRMLAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...TAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCTGCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR GCA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 2 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp ACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: TSRVLPRISSWLSRWPAGHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...GCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTGGAGCTTCCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 2 (lower is better)
Translates to: AARFMLLLEGRGSVPWSFRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...GAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 2 (lower is better)
Translates to: RRASSPWLTSRVLPRISSRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp CGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: RRASSPWLTSRVLPRISSPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 2 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 2 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR TCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR GCA 90 bp CAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGTGGCCTGGGGGACCTTaGCCGGTCTGTGTACAGAGC +
Preference number: 2 (lower is better)
Translates to: QPELNVFHRTAKLPGLLMWPGGP*PVCVQS
Trigger: GCTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCA...CATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR TCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGCAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR TCA 90 bp CCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCAGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 2 (lower is better)
Translates to: PPSNFTLSPGPSWEVLLPAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...TGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR TCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR TCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGCAGGCTGCATCTCTaGGGGCCATACCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: YPPWGLRASYSRGPQGAESRLHL*GPYLLC
Trigger: ACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR GCA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp CACCAAGAGTTCACTGCTTCTGCGGAGCACATCCCGGATCTTGCCAAGAGAGCCTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 2 (lower is better)
Translates to: HQEFTASAEHIPDLAKRASTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...GGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 2 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp GGCCTCACTCAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCTCAGAGGATCTGCCCTaGCCAAAGTCCAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: GLTQPELNVFHRTAKLPGSEDLP*PKSRSP
Trigger: TGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGA...GCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp AATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: NFTLSPGPSWEVLLPSLSPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...GGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 2 (lower is better)
Translates to: RPGGRVECQLLEERSMVLRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGTCACCAAGAGTTCACTaGTTCTGCGGAGCACATCCC +
Preference number: 2 (lower is better)
Translates to: YPPWGLRASYSRGPQGAESPRVH*FCGAHP
Trigger: GGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGA...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR GCA 90 bp GTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGGCACTGAGGCCCCGGGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 2 (lower is better)
Translates to: VECQLLEERSMVLALRPRDLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...CCGGGGCCTCAGTGCCAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp TTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCACCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: FTLSPGPSWEVLLPSLSPPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...TGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCACCAGCCCGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: LNVFHRTAKLPGLLMHQPGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...GGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR GCA 90 bp TTGACCACGGGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: LTTGQAIAGVLFLLIRKEPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...CTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
3UTR-3UTR GCA 90 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 2 (lower is better)
Translates to: SPSSMFSIERRSCRAFSCIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...GCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: PWGLRASYSRGPQGAERVAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp AGCCTCAGCATATTTGCCCTGTTTCAGGTAACAGGAAGCCAGGTTGTTCTTGGTGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 2 (lower is better)
Translates to: SLSIFALFQVTGSQVVLGARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...ACCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: QPELNVFHRTAKLPGLLMPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...CATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CCA 90 bp CTGGAGGGGTGCTGCACTAGGTTGGTTCAGATAGTTCAAGGAGGCTGCTCGCTTCCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: LEGCCTRLVQIVQGGCSLPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...AAGCGAGCAGCCTCCTTGAACTATCTGAACCAACCTAGTGCAGCACCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: QKHLHLPRISHCLQGPPGAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: LCTHLGASELATLEDHRVAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp ACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: TEASSPPSNFTLSPGPSWHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...CCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTGGAAAAGGAAGGACCTaGGACTTCCTACTCCTTAAC +
Preference number: 2 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPGKGRT*DFLLLN
Trigger: GTTAAGGAGTAGGAAGTCCCAGGTCCTTCCTTTTCC...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469987.1
3UTR-3UTR GCA 90 bp CCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCAGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 2 (lower is better)
Translates to: PPSNFTLSPGPSWEVLLPVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...TGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR TCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR TCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACC +
Preference number: 2 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREKPAAG*ISEGHT
Trigger: GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATAGCACCCTTAGTGAGTaGACTGAGGGCAGCAGATGG +
Preference number: 2 (lower is better)
Translates to: ELRIIRITGQCLEERTSYSTLSE*TEGSRW
Trigger: CCATCTGCTGCCCTCAGTCCACTCACTAAGGGTGCT...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
3UTR-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGAGCAGGCTGCATCTCTaGGGGCCATACCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESRLHL*GPYLLC
Trigger: ACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR TCA 72 bp GCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: ACRLIPLPQHQA*HPGLGDLARSV
Trigger: CACAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 72 bp TCTTGGCTGAGCCGGTGGCCTGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGACATCCTGGCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: SWLSRWPAGSSR*PNTRPDILAWG
Trigger: CCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp CGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGG +
Preference number: 3 (lower is better)
Translates to: RVLPRISSWLSR*PAGSSRCPNTR
Trigger: CCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp TGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCAGGCTCATCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: WLTSRVLPRISS*LSRWPAGSSRC
Trigger: GCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CAA 90 bp TCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCTGGCCTGGGGGACCTaGCCCGGTCTGTGTACAGAG +
Preference number: 3 (lower is better)
Translates to: SSPWLTSRVLPRISSWLSLAWGT*PGLCTE
Trigger: CTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCAG...GCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR TCA 72 bp CCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: PGVHCVGPLALG*PAVCSPGSPLG
Trigger: GCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp ACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: TAWCSLRRASSP*LTSRVLPRISS
Trigger: AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CAA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTGGAGCTTCGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 3 (lower is better)
Translates to: AARFMLLLEGRGSVPWSFVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...GAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR-3UTR CAA 90 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCCCCCAGGATCTCCTCTaGGCTGAGCCGGTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: SPSSMFSIERRSCRAFSCPQDLL*AEPVAC
Trigger: GCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGG...GCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 72 bp GTTGTCCGGCCCCAGCTGCCCCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTCCACGGCCTCATACTT +
Preference number: 3 (lower is better)
Translates to: VVRPQLPLVDGQ*SLVVAFHGLIL
Trigger: AAGTATGAGGCCGTGGAACGCTACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGCTGGGGCCGGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CAA 90 bp CCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCACCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: PPSNFTLSPGPSWEVLLPPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...TGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CAA 90 bp TCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 3 (lower is better)
Translates to: SLRRASSPWLTSRVLPRIATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...GATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: HSMVWDRLCSTA*CSLRRASSPWL
Trigger: CAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CAA 90 bp CGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: RRASSPWLTSRVLPRISSSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 72 bp GCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACCTGCTTTGTACCCACC +
Preference number: 3 (lower is better)
Translates to: APNPLTEKPAAG*ISEGHTCFVPT
Trigger: GGTGGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR GCA 72 bp AGAGTTCACTGCTTCTGCGGAGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCTGCAGGGTCCCACTGC +
Preference number: 3 (lower is better)
Translates to: RVHCFCGAHPGS*QESHSSAGSHC
Trigger: GCAGTGGGACCCTGCAGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 72 bp GCCTTCTCATGCACCAGCCCTTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTCTGGGACAGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: AFSCTSPSSWPP*CRHSMVWDRLC
Trigger: GCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp CCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGC +
Preference number: 3 (lower is better)
Translates to: PPSNFTLSPGPS*EVLLPSLSPSS
Trigger: GCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
3UTR CCA 72 bp TTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGTTCACTGCTTCTGCGG +
Preference number: 3 (lower is better)
Translates to: FMLLLEGRGSVP*SFLTKSSLLLR
Trigger: CCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
3UTR GCA 72 bp TCCCCTGGAGCTTCCTCACCAAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCTTGCCAAGAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SPGASSPRVHCF*GAHPGSCQESH
Trigger: GTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 72 bp TTCTCATGCACCAGCCCTTCCTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGGGACAGGCTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: FSCTSPSSWPPC*RHSMVWDRLCS
Trigger: GCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 72 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACCAGCCCTTCCTCATGG +
Preference number: 3 (lower is better)
Translates to: SPSSMFSIERRS*RAFSCTSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR GCA 72 bp AACTGTTCTGCAGCCAGAGAGTCAGAGGATCTGCCCTaGCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTT +
Preference number: 3 (lower is better)
Translates to: NCSAARESEDLP*PKSRSPAFPPL
Trigger: AAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR-3UTR CAA 90 bp TCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTATCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: SPPSNFTLSPGPSWEVLLSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...TAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 3 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 72 bp GAAGAAACTGTTCTGCAGCCAGAGAGTCAGAGGATCTaGCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: EETVLQPESQRI*PAQSPEVQRSH
Trigger: GTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
3UTR CCA 72 bp GATAGGGTCAGTGCCCTGGAAGGAAAAGGAAGGACCTaGGACTTCCTACTCCTTAACTCCTCAGGATGGGGC +
Preference number: 3 (lower is better)
Translates to: DRVSALEGKGRT*DFLLLNSSGWG
Trigger: GCCCCATCCTGAGGAGTTAAGGAGTAGGAAGTCCCAGGTCCTTCCTTTTCCTTCCAGGGCACTGACCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469987.1
3UTR-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR TCA 72 bp ACTTATTCTGGTCACGATACACCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAGGGTGGCCACGGCCTG +
Preference number: 3 (lower is better)
Translates to: TYSGHDTPKQGC*AWWRHQGGHGL
Trigger: CAGGCCGTGGCCACCCTGATGTCGCCACCATGCTCAACATCCTTGCTTTGGTGTATCGTGACCAGAATAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR TCA 72 bp ACTTGCCCCTTTTGCCATAGAGCACAGCCAAATTGTTaGGTGTGGCAGCCACAGCAGGATGGTCAGGTCCCA +
Preference number: 3 (lower is better)
Translates to: TCPFCHRAQPNC*VWQPQQDGQVP
Trigger: TGGGACCTGACCATCCTGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCTCTATGGCAAAAGGGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR GCA 72 bp GGATCTCTTTGTATAGTGTCTCAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGGAAGCCAGGTTGTTCT +
Preference number: 3 (lower is better)
Translates to: GSLCIVSQPQHI*PVSGNRKPGCS
Trigger: AGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTGAGACACTATACAAAGAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGCCGGAGATGGGGTCTaGGGGCATGCGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQAGDGV*GHARRE
Trigger: CTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQGLLNG*RVARNR
Trigger: GCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAACCGCGGCGCTGGAGTaGGTCTCCTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQTAALE*VSWAWK
Trigger: TTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGT...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACAGAGGCCCTGGCTGTaGCACTCAGGCCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQQRPWL*HSGQST
Trigger: CGTGCTCTGGCCTGAGTGCCACAGCCAGGGCCTCTG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS-3UTR CCA 90 bp TCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLRRASSPWLTSRVLPRIPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...GATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCGGGATAGAGGCAGGCTaGAGCCTTGGAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPCLRDRRAHSSRVSAASGIEAG*SLGVGG
Trigger: GCCTCCCACTCCAAGGCTCCAGCCTGCCTCTATCCC...GGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
3UTR CAA 72 bp TTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTaGGCTGAGCCGGTGGCCTGCAGGCTCATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LADQPCAPQDLL*AEPVACRLIPL
Trigger: CAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCTCGGGCTGTCGACCTaGCCTGGTGCCCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGLGLST*PGAQGW
Trigger: CCAACCCTGGGCACCAGGGCAGGTCGACAGCCCGAG...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAAACGCAGTAGAGGAGTaGCTCGGGCTGTCGACCTGC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQNAVEE*LGLSTC
Trigger: GCAGGTCGACAGCCCGAGGCACTCCTCTACTGCGTT...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGGCGGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GPQGTFLQGLSSLQLSLAGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...CGCCAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: SLRRASSPWLTSRVLPRISWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...GATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGGLLNG*RVARNR
Trigger: GCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISLRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQSATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQSPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAACAGAAGCCACGACTaGAGCTCCTTGGCTACCCGG +
Preference number: 4 (lower is better)
Translates to: VPCLRDRRAHSSRVSAASNRSHD*SSLATR
Trigger: CCGGGTAGCCAAGGAGCTCCAGTCGTGGCTTCTGTT...GGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGATGGGGACTTGGGAGTaGAGGGGCTGCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGPQGTFLQGLSSLQLSLMGTWE*RGCTLL
Trigger: AAGGAGGGTGCAGCCCCTCCACTCCCAAGTCCCCAT...CAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTGGAGCTTCCCTTGGATGGGGACTTaGGAGTGGAGGGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AARFMLLLEGRGSVPWSFPWMGT*EWRGCT
Trigger: GGTGCAGCCCCTCCACTCCCAAGTCCCCATCCAAGG...GAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGTGTGGATGGACGACTaGGGTCCGCAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISVWMDD*GPQLQR
Trigger: TCGCTGGAGCTGCGGACCTCAGTCGTCCATCCACAC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGGTGTGGATGGACGACTaGGGTCCGCAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWVWMDD*GPQLQR
Trigger: TCGCTGGAGCTGCGGACCTCAGTCGTCCATCCACAC...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp CCCACAGGTCTTCAAAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTGLQRRPIPVSFPKPASGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...GGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTTTGAAGACCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp TCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAACCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SHCLQGPPGRSFYHHSPQPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...TTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGCACTCCTCGGCCCAGTaGGTAGTGGAGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGPQGTFLQGLSSLQLSLHSSAQ*VVEIQV
Trigger: CACCTGAATCTCCACTACTCACTGGGCCGAGGAGTG...CAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCGCATGTCGAGCCCTGTaGGGCACCCCCTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSACRAL*GTPSCG
Trigger: ACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGC...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGCCTCACTCAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GLTQPELNVFHRTAKLPGGLLNG*RVARNR
Trigger: GCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACC...GCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAATCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PGPQGTFLQGLSSLQLSLSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...CAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCATCTGCCGGTGTGGCTaGCGCTCTTGCCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGICRCG*RSCRYC
Trigger: GCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGAT...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347162.10
ENST00000467906.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGCCTGGTGCCCAGGGTTaGGAGAGTGAGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVPGAQG*ESEMGG
Trigger: CCCGCCCATCTCACTCTCCCAACCCTGGGCACCAGG...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGGCTGTCGACCTGCCCTaGTGCCCAGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVAVDLP*CPGLGE
Trigger: CTCTCCCAACCCTGGGCACCAGGGCAGGTCGACAGC...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: RRASSPWLTSRVLPRISSLCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISRASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGRASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVRPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCATGGGCCTGGAAGTCTaGGATAGAGGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSMGLEV*DRGRLE
Trigger: CTCCAGCCTGCCTCTATCCCAGACTTCCAGGCCCAT...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCGCCAGCTCATGGGCCTaGAAGTCTGGGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSASSWA*KSGIEA
Trigger: TGCCTCTATCCCAGACTTCCAGGCCCATGAGCTGGC...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGGGCAGCCGGATCGGTaGAGCCCAGGAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGGQPDR*SPGNGE
Trigger: CTCTCCATTTCCTGGGCTCCACCGATCCGGCTGCCC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGAGGCACCCCCTCCTGTaGTGGCCACTCCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPGGRVECQLLEERSMVLRHPLL*WPLLGP
Trigger: TGGGCCGAGGAGTGGCCACCACAGGAGGGGGTGCCT...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCGACCCCGAGGTCACTaGGTCAGTCGGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVRPRGH*VSRWRR
Trigger: CCTGCGCCACCGACTGACTCAGTGACCTCGGGGTCG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS-3UTR TCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp TTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCACCAGCCCTTCCTCACCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FSIERRSCRAFSCTSPSSPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...TGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSLEFHTVSRALLGGPSTGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...GGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp ACCAGGCCTGACATCCTGGCCTGGGGGACCTTGCCCGGTCTGTGTACAGAGCAGGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: TRPDILAWGTLPGLCTEQAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...CTGCTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAAGGGCATCGTTCGCCCGGCACATTaGCCAGCAGATCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SHSRMVRSQGALPDAKGIVRPAH*PADPGQ
Trigger: CTGCCCTGGATCTGCTGGTCAATGTGCCGGGCGAAC...GATGCCCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TCAGAGGATCTGCCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTCTCGGGCTGTCGACCTaGCCTGGTGCCCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SEDLPCPKSRSPAFPPLLLGLST*PGAQGW
Trigger: CCAACCCTGGGCACCAGGGCAGGTCGACAGCCCGAG...AAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAELRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCACAGGTCTTCAAAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTGLQRRPIPVSFPKPASPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...GGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTTTGAAGACCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGGCGCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTC +
Preference number: 4 (lower is better)
Translates to: GPQGTFLQGLSSLQLSLALVDGQ*SLVVAF
Trigger: GAACGCTACTACCAGCGAGCACTGGCCATCTACGAG...CGCCAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR GCA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGTGGCCTGGGGGACCTTaGCCGGTCTGCAATCTGCCG +
Preference number: 4 (lower is better)
Translates to: RPGGRVECQLLEERSMVLWPGGP*PVCNLP
Trigger: CGGCAGATTGCAGACCGGGCAAGGTCCCCCAGGCCA...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGGCCTGGGGGACCTTaGCCGGTCTGTGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVWPGGP*PVCVQS
Trigger: GCTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCA...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS-3UTR GCA 90 bp GGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGGCGGGAGCAGGCCTGCTCTaGTCGCTCATTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: GPQGTFLQGLSSLQLSLAGAGLL*SLIHGF
Trigger: AAAGCCATGAATGAGCGAGCAGAGCAGGCCTGCTCC...CGCCAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCGGCCGGGAAGAAGGCTaGTTCCATTCGGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTGREEG*FHSGCR
Trigger: CCGGCAGCCCGAATGGAAGCAGCCTTCTTCCCGGCC...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCGCCAGCCTCCCTCATTaGAGGCCTAGGGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LCSTAWCSLRRASSPWLTASLPH*RPRELL
Trigger: CAGTAGCTCCCTAGGCCTGCAATGAGGGAGGCTGGC...GGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CCCACAGGTCTTCAAAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTGLQRRPIPVSFPKPASPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...GGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTTTGAAGACCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAARASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GGCCTCACTCAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GLTQPELNVFHRTAKLPGRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...GCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAACCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: TSLEFHTVSRALLGGPSTVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...GGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCTTCATGTTGCTGCTaGAGGGCCGAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGASCCC*RAEAQS
Trigger: GGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGCAGAGGCCCTGGCTGTaGCACTCAGGCCAGAGCACG +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRQRPWL*HSGQST
Trigger: CGTGCTCTGGCCTGAGTGCCACAGCCAGGGCCTCTG...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVGLLNG*RVARNR
Trigger: GCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCACCCTCATGGTGCCGGCTCATCCACAGACCCAAACTCCTGTACATGGGCACGCGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PPSWCRLIHRPKLLYMGTRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...CGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGAGCCGGCACCATGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: DRLCSTAWCSLRRASSPWIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...CCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTTCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CACCAAGAGTTCACTGCTTCTGCGGAGCACATCCCGGATCTTGCCAAGAGAGCCCTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HQEFTASAEHIPDLAKRALRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...GGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGKPAAG*ISEGHT
Trigger: GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTT...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGGCACTGAGGCCCCGGATCTGCCGGTGTGGCTaGCGCTCTTGCCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: VECQLLEERSMVLALRPRICRCG*RSCRYC
Trigger: GCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGAT...CCGGGGCCTCAGTGCCAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGGCCCGGTCTGCAATCTaGCGGTGTGGCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QKHLHLPRISHCLQGPPGARSAI*RCGCRS
Trigger: AGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC...CCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRAPART*RPNDPE
Trigger: CTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGC...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCACCAGCCCTTCCTCAGCTGTCGACCTGCCCTaGTGCCCAGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSIERRSCRAFSCTSPSSAVDLP*CPGLGE
Trigger: CTCTCCCAACCCTGGGCACCAGGGCAGGTCGACAGC...TGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCTGGGTCTCCTGGGCCTaGAAACGCAGTAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LCSTAWCSLRRASSPWLTWVSWA*KRSRGV
Trigger: CACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCA...GGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGACCGCGGCGCTGGAGTaGGTCTCCTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QPELNVFHRTAKLPGLLMTAALE*VSWAWK
Trigger: TTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGT...CATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGAAGGAACCGCGGCGCTaGAGTGGGTCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVKEPRR*SGSPGP
Trigger: AGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTT...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTGCCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTTCACCACTTAAGGAACCGCGGCGCTaGAGTGGGTCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPCPKSRSPAFPPLLSPLKEPRR*SGSPGP
Trigger: AGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTT...AAGTGGTGAAAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSPPSNFTLSPGPSWEVLPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...AAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTGGAGGGGTGCTGCACTAGGTTGGTTCAGATAGTTCAAGGAGGCTGCTCGCTTCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LEGCCTRLVQIVQGGCSLPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...AAGCGAGCAGCCTCCTTGAACTATCTGAACCAACCTAGTGCAGCACCCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCRASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAERASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISLCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCTCCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPCAPQDLLLAEPVACRLHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...GAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: VSGTAGHIPPGSQQPPAFRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...GAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCGTTGGCGGGCCGTGGTaGAGAAGCAGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISHCLQGPPGRSFYHHSPVGGPW*RSRWAG
Trigger: TCCTGCCCACCTGCTTCTCCACCACGGCCCGCCAAC...GGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGCTGTTGGCGGGCCGTaGTGGAGAAGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEAVGGP*WRSRWA
Trigger: TGCCCACCTGCTTCTCCACCACGGCCCGCCAACAGC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGGAGCTGCCCGCGGATTaGCTCTCACGGCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RPGGRVECQLLEERSMVLELPAD*LSRRSG
Trigger: ACCTGAACGCCGTGAGAGCCAATCCGCGGGCAGCTC...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGAATGGGAGGTCTGCTaGACGGCTGCCGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVEWEVC*TAAGSQ
Trigger: TTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCGAATGGGAGGTCTGCTaGACGGCTGCCGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SPSSMFSIERRSCRAFSCEWEVC*TAAGSQ
Trigger: TTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTC...GCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTGCCCCTTTAAATCCATaGTGGCTGCCGCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAAAPLNP*WLPLEA
Trigger: TGCCTCGAGCGGCAGCCATCATGGATTTAAAGGGGC...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp TCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTAGGTGGGCACATCCCCTaGGCTCCAGATTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPPSNFTLSPGPSWEVLLGGHIP*APDSGP
Trigger: AGGCCCAGAATCTGGAGCTCAGGGGATGTGCCCACC...TAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCGGGCTGTCGACCTaGCCTGGTGCCCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHLGLST*PGAQGW
Trigger: CCAACCCTGGGCACCAGGGCAGGTCGACAGCCCGAG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCATGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: FTLSPGPSWEVLLPSLSPCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...TGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGLRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAAGGGCATCCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHSRMVRSQGALPDAKGIHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...GATGCCCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: SLRRASSPWLTSRVLPRIQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...GATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp TCACTGCGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SLRRASSPWLTSRVLPRIIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...GATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTC +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISLVDGQ*SLVVAF
Trigger: GAACGCTACTACCAGCGAGCACTGGCCATCTACGAG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTC +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGLVDGQ*SLVVAF
Trigger: GAACGCTACTACCAGCGAGCACTGGCCATCTACGAG...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPCLRDRRAHSSRVSAASIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...GGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTGGCCTGGGGGACCTTaGCCGGTCTGCAATCTGCCG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPWPGGP*PVCNLP
Trigger: CGGCAGATTGCAGACCGGGCAAGGTCCCCCAGGCCA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347162.10
ENST00000467906.5
CDS-3UTR GCA 90 bp AGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCTGGCCTGGGGGACCTTaGCCGGTCTGTGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: SPSSMFSIERRSCRAFSCWPGGP*PVCVQS
Trigger: GCTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCA...GCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GCAGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCGGGCTGCACCCTCCTTaGCTCTGCCACTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ADLGAGLNVSCLKRGPWCGLHPP*LCHFLG
Trigger: ACCAAGAAAGTGGCAGAGGCAAGGAGGGTGCAGCCC...GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTCGAGTGCCTGCTGGTaGATGTCGAGCCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LHLPRISHCLQGPPGRSFSSACW*MSSPVR
Trigger: CCTCACAGGGCTCGACATGCACCAGCAGGCACTCGA...GAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTGCTTCCATTCGGGCTaGCGGAGATGGGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPCFHSG*RRWGLR
Trigger: CCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCA...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCTCCTTTTACGTTATTaGGGAGCGACGGCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSLLLRY*GATAPD
Trigger: GTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCCACCCTCATGGTaGCGGCTCATCCACAGACCC +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEVPPSW*RLIHRP
Trigger: GGGTCTGTGGATGAGCCGGCACCATGAGGGTGGGAC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAPART*RPNDPE
Trigger: CTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCTGTCGACCTGCCCTaGTGCCCAGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAVDLP*CPGLGE
Trigger: CTCTCCCAACCCTGGGCACCAGGGCAGGTCGACAGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCTGGAGTGGGTCTCCTaGGCCTGGAAACGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSLEWVS*AWKRSR
Trigger: TCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTACCGCGGCGCTGGAGTaGGTCTCCTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGTAALE*VSWAWK
Trigger: TTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCACCGCGGCGCTGGAGTaGGTCTCCTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPTAALE*VSWAWK
Trigger: TTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CGTAGGGCCTCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: RRASSPWLTSRVLPRISSAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...AGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRRASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAACLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCCACAGGTCTTCAAAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: PTGLQRRPIPVSFPKPASCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...GGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTTTGAAGACCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGGTGTCCCACCCTCATaGTGCCGGCTTTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISGVPPS*CRLLLI
Trigger: AATGAGCAAAAGCCGGCACCATGAGGGTGGGACACC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTATCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SVAATAGWSGPKVLSRMLSATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...TAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCTGCCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTTCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAASATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVSPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGRPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTCGGGAGTTGCGAGTCTaGTCAGGAGTCATGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAARELRV*SGVMQV
Trigger: GACCTGCATGACTCCTGACCAGACTCGCAACTCCCG...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCGGTGTGTATCCAGCTTaGGCTCCAGTTTTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGGVYPA*APVFCP
Trigger: CGGGCAGAAAACTGGAGCCCAAGCTGGATACACACC...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCCTGAGCTCCAGATTCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LHLPRISHCLQGPPGRSFLSSRF*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGAATCTGGAGCTCAG...GAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTGTGGATGGACGACTaGGGTCCGCAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFVWMDD*GPQLQR
Trigger: TCGCTGGAGCTGCGGACCTCAGTCGTCCATCCACAC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGAATGGGAGGTCTGCTaGACGGCTGCCGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGEWEVC*TAAGSQ
Trigger: TTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCAGCAGGCTGCATCTCTaGGGGCCATACCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSSRLHL*GPYLLC
Trigger: ACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCT...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ISHCLQGPPGRSFYHHSPQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...GGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACTCGGGCTGTCGACCTaGCCTGGTGCCCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLLGLST*PGAQGW
Trigger: CCAACCCTGGGCACCAGGGCAGGTCGACAGCCCGAG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GCAGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ADLGAGLNVSCLKRGPWCSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCAGAGCACGGAAGAAACTGTTCTGCAGCCAGAGAGTCAGAGGATCTGCCCTGCTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: PEHGRNCSAARESEDLPCCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...GCAGGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPLRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTGACCACGGGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGCTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LTTGQAIAGVLFLLIRKELRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...CTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCTCCAGCTTTCCCTGCAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: PGPQGTFLQGLSSLQLSLQPQHI*PVSGNR
Trigger: CCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG...CAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR GCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAAAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCCCGGTCTGCAATCTaGCGGTGTGGCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRARSAI*RCGCRS
Trigger: AGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCCCGGTCTGCAATCTaGCGGTGTGGCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPARSAI*RCGCRS
Trigger: AGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTGGCCTGGGGGACCTTaGCCGGTCTGCAATCTGCCG +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRWPGGP*PVCNLP
Trigger: CGGCAGATTGCAGACCGGGCAAGGTCCCCCAGGCCA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR GCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGGGCAGGAGCAGGCCTaGTCTGCTCGCTCATTCATG +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEGQEQA*SARSFM
Trigger: CATGAATGAGCGAGCAGAGCAGGCCTGCTCCTGCCC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TCTAGCCCTTGGCTGACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCTCAGAGGATCTGCCCTaGCCAAAGTCCAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPWLTSRVLPRISSWLSSEDLP*PKSRSP
Trigger: TGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGA...GCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHAPART*RPNDPE
Trigger: CTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCTGGAGTGGGTCTCCTaGGCCTGGAAACGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCLEWVS*AWKRSR
Trigger: TCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTLCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAELCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGCTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRLCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTGGAGCTTCCTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AARFMLLLEGRGSVPWSFLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...GAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CCA 90 bp TCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAATCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: SHCLQGPPGRSFYHHSPQSPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...TTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGTCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAESPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCAAGGCAGCTTGGCTaGCCAGCCCCCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPARQLG*PAPNPL
Trigger: CAGAGGGTTGGGGGCTGGCCAGCCAAGCTGCCTTGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGCTCAGGGAACCCCCTTaGATGGGGACTTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRLREPP*MGTWEW
Trigger: CCACTCCCAAGTCCCCATCCAAGGGGGTTCCCTGAG...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGGGTGTCCCACCCTCATaGTGCCGGCTCATCCACAGA +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRGVPPS*CRLIHR
Trigger: TCTGTGGATGAGCCGGCACCATGAGGGTGGGACACC...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGTGTGGATGGACGACTaGGGTCCGCAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHVWMDD*GPQLQR
Trigger: TCGCTGGAGCTGCGGACCTCAGTCGTCCATCCACAC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCTCTAGCCCTTGGCTaGCCAGCCGTGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAPLALG*PAVCSP
Trigger: TGGGGAGCACACGGCTGGTCAGCCAAGGGCTAGAGG...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCTTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCAGAGAGGGTGTCCTaGGGGTCCTTCCTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGAERVS*GSFLRG
Trigger: CCCTCTTAGGAAGGACCCTCAGGACACCCTCTCTGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGCCATTGCTCAGGTaGGTGAGCAGTTCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHLPLLR*VSSSPG
Trigger: GCCGGGCGAACTGCTCACTCACCTGAGCAATGGCAG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSRVPPQ*PMMQER
Trigger: TCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCT...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACTGCGCTGTAGCCGCTaGTGGGTGCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSALRCSR*WVPASS
Trigger: TGAGCTGGCTGGCACCCAGCAGCGGCTACAGCGCAG...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QKHLHLPRISHCLQGPPGPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...CCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QPELNVFHRTAKLPGLLMPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...CATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTC +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCLVDGQ*SLVVAF
Trigger: GAACGCTACTACCAGCGAGCACTGGCCATCTACGAG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGCAGCTGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: CLQGPPGRSFYHHSPQAADLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...AGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVKPAAG*ISEGHT
Trigger: GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTT...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACATCTGCCGGTGTGGCTaGCGCTCTTGCCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHICRCG*RSCRYC
Trigger: GCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGAT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR GCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGGCACAGCTGCAGCAATaGCTGCAAGCTGTCCTGATT +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVAQLQQ*LQAVLI
Trigger: AATCAGGACAGCTTGCAGGCATTGCTGCAGCTGTGC...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTTTCATGGCTTTCCTGTaGTCTGCCATTGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISFMAFL*SAIAQV
Trigger: CACCTGAGCAATGGCAGAGCACAGGAAAGCCATGAA...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CCCACAGGTCTTCAAAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCGAGAGTCAGAGGATCTaGCCTGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTGLQRRPIPVSFPKPASESQRI*PAQSPE
Trigger: TTCTGGACTTTGGGCAGGGCAGATCCTCTGACTCTC...GGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTTTGAAGACCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCATCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSASWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTATCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GCAGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: ADLGAGLNVSCLKRGPWCRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PWGLRASYSRGPQGAERVPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCATCAGCCACTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCACTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TISHCLRDRRAHSSRVSALFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...TGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGTGGCTGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469987.1
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CCA 90 bp CCCAAGCAGCTCTGCCACCTTCGTCTGGCTGATAGGGTCAGTGCCCTGGAAGGACCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PKQLCHLRLADRVSALEGPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...TCCTTCCAGGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGAGCTGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469987.1
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGGTGTCCCACCCTCATaGTGCCGGCTTTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCGVPPS*CRLLLI
Trigger: AATGAGCAAAAGCCGGCACCATGAGGGTGGGACACC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCTTCATGTTGCTGCTaGAGGGCCGAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGASCCC*RAEAQS
Trigger: GGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLRPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTTGCAATCTGCCGGTGTaGCTGCCGCTCTTGCCGGTA +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPCNLPV*LPLLPV
Trigger: TACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCA...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGGGAGGGAGGAACACCTaGTCACTCCAAACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HSMVWDRLCSTAWCSLRRGGRNT*SLQTQS
Trigger: TGACTGGGTTTGGAGTGACCAGGTGTTCCTCCCTCC...CCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCAGTGCGGGGCGTGGGGTaGGGAGGGCAAGGAATACTG +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAVRGVG*GGQGIL
Trigger: CAGTATTCCTTGCCCTCCCCACCCCACGCCCCGCAC...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGCTTGGAGTGGGAGGCTaGGCCACACTGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQLGVGG*ATLVPT
Trigger: TGTGGGCACCAGTGTGGCCCAGCCTCCCACTCCAAG...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACAACCTGACGCGCTGTTaGCGGGCCGTGGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHNLTRC*RAVVEK
Trigger: CTTCTCCACCACGGCCCGCCAACAGCGCGTCAGGTT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGAGCACCGAGCAGCTTaGCCGGGAAGAAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPEHRAA*PGRRLL
Trigger: AAGCAGCCTTCTTCCCGGCCAAGCTGCTCGGTGCTC...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGACCAGCATCACCTAGGTaGGCACATCCCCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSIFTSLEFHTVSRALLGPASPR*AHPLSS
Trigger: GGAGCTCAGGGGATGTGCCCACCTAGGTGATGCTGG...TCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGPDILA*GTLPGK
Trigger: TTTACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: NFTLSPGPSWEVLLPSLSAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...GGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAERVPPQ*PMMQER
Trigger: TCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTGACCACGGGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGCGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LTTGQAIAGVLFLLIRKERPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...CTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR GCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTATCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: DTQWSGTGFAARPGVHCVSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...TACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCCAGAAGTCCAGCGTTCCCACCCCTTCTTTCACCACTTCACAGCTACCCAGAGTCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SRSPAFPPLLSPLHSYPESPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...CTCTGGGTAGCTGTGAAGTGGTGAAAGAAGGGGTGGGAACGCTGGACTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LHLPRISHCLQGPPGRSFPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...GAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GCAGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCGGGTTGAATGTCAGCTaGTTGAAGAGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ADLGAGLNVSCLKRGPWCGLNVS*LKRGPW
Trigger: CCATGGACCTCTCTTCAAGCAGCTGACATTCAACCC...GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGKPAAG*ISEGHT
Trigger: GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGAGAGGCTGGCACAGCTaGAGCAATGCCTGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: HRSIFTSLEFHTVSRALLRGWHS*SNACKL
Trigger: CAGCTTGCAGGCATTGCTGCAGCTGTGCCAGCCTCT...CAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCCACCCTCCTTGCCTCTaGCACTTTCTTGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: FHTVSRALLGGPSTITLPHPPCL*HFLGLY
Trigger: GTAGAGACCAAGAAAGTGGCAGAGGCAAGGAGGGTG...GGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTATGGGCTCCAGTTTTCTaGCCGCCTCCTTTTACGTTA +
Preference number: 4 (lower is better)
Translates to: SVAATAGWSGPKVLSRMLWAPVF*PPPFTL
Trigger: TAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCA...TAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp AGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAAGGGCATCCGCTCTTGCCGGTACTaGCCCTTTAAATCCATGATG +
Preference number: 4 (lower is better)
Translates to: SHSRMVRSQGALPDAKGIRSCRY*PFKSMM
Trigger: CATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCG...GATGCCCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPLCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHLCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAERHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCAAGAGCCAGCATCACCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSARASIT*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCT...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPLCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QPELNVFHRTAKLPGLLMGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...CATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCACCAGCCCCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LNVFHRTAKLPGLLMHQPRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...GGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp TCAGAGGATCTGCCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SEDLPCPKSRSPAFPPLLPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...AAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: WGLRASYSRGPQGAERVSIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGGTGTCCCACCCTCATaGTGCCGGCTTTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVGVPPS*CRLLLI
Trigger: AATGAGCAAAAGCCGGCACCATGAGGGTGGGACACC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGSATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTTCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGCTTCATGTTGCTGCTaGAGGGCCGAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPASCCC*RAEAQS
Trigger: GGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATGCAATCTGCCGGTGTaGCTGCCGCTCTTGCCGGTA +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPCNLPV*LPLLPV
Trigger: TACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCTTCTTTCTCCTCCTaGGCCTCACTCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPSFSS*ASLSPS
Trigger: GCTCGGGCTGAGTGAGGCCCAGGAGGAGAAAGAAGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453940.6
CDS-3UTR CCA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGCTGCTCGCTCATTCATaGCTTTCCTGTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPGGRVECQLLEERSMVLLLAHS*LSCALP
Trigger: TGGCAGAGCACAGGAAAGCCATGAATGAGCGAGCAG...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACACGACTGGAGCTCCTTaGCTACCCGGGGCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHTTGAP*LPGAFQ
Trigger: TTGGAAGGCCCCGGGTAGCCAAGGAGCTCCAGTCGT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGAACCCCCTTGGATaGGGACTTGGGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLGNPLG*GLGSGG
Trigger: CCCTCCACTCCCAAGTCCCCATCCAAGGGGGTTCCC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp TCTTTCTCCTCCGAGGTATGTCCATCCTCATCATACTGCCGCAGCTGCCCCAGGCTCCACAATGCCCGATaGTGCAGGAAAGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SFSSEVCPSSSYCRSCPRLHNAR*CRKEWE
Trigger: CTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAG...CCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR TCA 90 bp TCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCGCTGCTGTAGCACCTTaGCCACGGGACAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SLDSAWKKGLLMPPSSAPAAVAP*PRDKPL
Trigger: CAATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGC...GGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp CCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: PPSNFTLSPGPSWEVLLPFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...TGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR TCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTAGCAGGCTGCATCTCTaGGGGCCATACCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSRLHL*GPYLLC
Trigger: ACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTTGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACTGCTCGCTTCATGTTaGTGCTGGAGGGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLLLASC*CWRAEA
Trigger: AGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCTGAGGGCCATACCTaGTTTGTACCCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSEGHT*FVPTLG
Trigger: CCCCAAGGTGGGTACAAAGCAGGTATGGCCCTCAGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACAAGCCAGCAGCAGGCTaGATCTCTGAGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHKPAAG*ISEGHT
Trigger: GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCGCCCGGTCTGCAATCTaGCGGTGTGGCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLGSLDSAWKKGLLMPPSARSAI*RCGCRS
Trigger: AGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC...GGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGAGAGTCAGAGGATCTaGCAGCAAGAGGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGESQRI*QQEACL
Trigger: CAGACACGCCTCTTGCTGGCAGATCCTCTGACTCTC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTGGGTCTCCTGGGCCTaGAAACGCAGTAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHWVSWA*KRSRGV
Trigger: CACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGCTGGAGTGGGTCTCCTaGGCCTGGAAACGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQLEWVS*AWKRSR
Trigger: TCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAG...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp GGCCTCACTCAGCCCGAGCTCAATGTTTTCCATAGAACGGCGAAGCTGCCGGGCACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: GLTQPELNVFHRTAKLPGTQSLP*FCLCHG
Trigger: ACCGTGACAGAGACAAAACCATGGAAGTGACTGGGT...GCCCGGCAGCTTCGCCGTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGACCTTGCCCGGTCTaGTCACTCCAAACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHGPCPV*SLQTQS
Trigger: TGACTGGGTTTGGAGTGACCAGACCGGGCAAGGTCC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS-3UTR CCA 90 bp GAAGTCCAGCGTTCCCACCCCTTCTTTCACCACTTCACAGCTACCCAGAGGACCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: EVQRSHPFFHHFTATQRTRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...GGTCCTCTGGGTAGCTGTGAAGTGGTGAAAGAAGGGGTGGGAACGCTGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TTTTCCATAGAACGGCGAAGCTGCCGGGCCTTCTCATGCACCAGCCCTTCCTCACCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSIERRSCRAFSCTSPSSPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...TGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCCTCCAGCTTTCCCTaGCGCCTATACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLASSFP*RLYRAP
Trigger: GGGAGCTCTGTATAGGCGCCAGGGAAAGCTGGAGGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTCTGCCACCTTCGTCTaGCTGATAGGGTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRSATFV*LIGSVP
Trigger: GGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRSPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCTTCATGTTGCTGCTaGAGGGCCGAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLASCCC*RAEAQS
Trigger: GGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGAGGGAGGAACACCTaGTCACTCCAAACCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGGGRNT*SLQTQS
Trigger: TGACTGGGTTTGGAGTGACCAGGTGTTCCTCCCTCC...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS-3UTR CCA 90 bp GCCCCTTTTGCCATAGAGCACAGCCAAATTGTTGAGTGTGGCAGCCACAGCAGGTCAGGAGCGTTTTCCTaGGCCCCATGTGTACACCAC +
Preference number: 4 (lower is better)
Translates to: APFAIEHSQIVECGSHSRSGAFS*APCVHH
Trigger: GTGGTGTACACATGGGGCCCAGGAAAACGCTCCTGA...CCTGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCTCTATGGCAAAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGTTTCGAGTGCCTGCTaGTGCATGTCGAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHVSSAC*CMSSPV
Trigger: CACAGGGCTCGACATGCACCAGCAGGCACTCGAAAC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRPQHQA*HPGLGD
Trigger: GTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCCAGAAGTCCAGCGTTCCCACCCCTTCTTTCACCACTTCACAGCTACCCAGAGAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SRSPAFPPLLSPLHSYPERVPPQ*PMMQER
Trigger: TCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCT...CTCTGGGTAGCTGTGAAGTGGTGAAAGAAGGGGTGGGAACGCTGGACTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTATCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCGGCCACGGCCTGATGTaGGCTCCAGGTCCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SLGSLDSAWKKGLLMPPSGHGLM*APGPLV
Trigger: CACTAGAGGACCTGGAGCGCACATCAGGCCGTGGCC...GGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCTCGTAGATGGCCAGTaGTCGCTGGTAGTAGCGTTC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRLVDGQ*SLVVAF
Trigger: GAACGCTACTACCAGCGAGCACTGGCCATCTACGAG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGCACATCCCGGATCTTaGCAAGAGAGCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHAHPGS*QESHSS
Trigger: AGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTCACCAAGAGTTCACTaGTTCTGCGGAGCACATCCC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGSPRVH*FCGAHP
Trigger: GGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGDLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGGGGTTGAATGTCAGCTaGTTGAAGAGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LCTHLGASELATLEDHRVGLNVS*LKRGPW
Trigger: CCATGGACCTCTCTTCAAGCAGCTGACATTCAACCC...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTGACCACGGGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGTCTGAGGGCCATACCTaGTTTGTACCCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LTTGQAIAGVLFLLIRKESEGHT*FVPTLG
Trigger: CCCCAAGGTGGGTACAAAGCAGGTATGGCCCTCAGA...CTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTGTGGCTGCCGCTCTTaGCGGTACTGCCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHCGCRS*RYCPFK
Trigger: TTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTGTGGCTGCCGCTCTTaGCGGTACTGCCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRCGCRS*RYCPFK
Trigger: TTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000467906.5
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAETQSLP*FCLCHG
Trigger: ACCGTGACAGAGACAAAACCATGGAAGTGACTGGGT...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259708.7
ENST00000394056.6
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTCATCCACAGACCCAAACTCCTGTACATGGGCACGGGTCAGGATCTCTTTGGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GSSTDPNSCTWARVRISLAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...CAAAGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSALCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: QKHLHLPRISHCLQGPPGIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...CCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469987.1
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGCTTTGTACCCACCTTaGGGCCTCAGAGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHALYPP*GLRASY
Trigger: GTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAGC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCAGCACCCTTAGTGAGTaGACTGAGGGCAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SLDSAWKKGLLMPPSSAPSTLSE*TEGSRW
Trigger: CCATCTGCTGCCCTCAGTCCACTCACTAAGGGTGCT...GGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAAGGAAAAGGAAGGACCTaGGACTTCCTACTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: SHCLQGPPGRSFYHHSPQGKGRT*DFLLLN
Trigger: GTTAAGGAGTAGGAAGTCCCAGGTCCTTCCTTTTCC...TTGGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469987.1
CDS-3UTR TCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCTCCACAATGCCCGATaGTGCAGGAAAGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPLHNAR*CRKEWE
Trigger: CTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCTCCACAATGCCCGATaGTGCAGGAAAGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRLHNAR*CRKEWE
Trigger: CTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPRVPPQ*PMMQER
Trigger: TCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCT...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR GCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCTGAGCCGGTGGCCTaGAGGCTCATCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYAEPVA*RLIPLP
Trigger: GGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGC...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCACGGCCTCATACTTaGCCTGGTTTTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPRPHT*PGFGTR
Trigger: TCTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTCACCAAGAGTTCACTaGTTCTGCGGAGCACATCCC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRSPRVH*FCGAHP
Trigger: GGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGA...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGTCACCAAGAGTTCACTaGTTCTGCGGAGCACATCCC +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQSPRVH*FCGAHP
Trigger: GGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGA...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPDLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGGGTTGAATGTCAGCTaGTTGAAGAGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPGLNVS*LKRGPW
Trigger: CCATGGACCTCTCTTCAAGCAGCTGACATTCAACCC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGTCTGGTCAGGAGTCATaGAGGTCCGTGACCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQSGQES*RSVTLD
Trigger: ATCCAAGGTCACGGACCTGCATGACTCCTGACCAGA...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CAGCCTCAGCATATTTGCCCTGTTTCAGGTAACAGGAAGCCAGGTTGTTCTTGGATGCGAGGCGGGAGTTaGGAGTCTGGTCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QPQHICPVSGNRKPGCSWMRGGS*ESGQES
Trigger: TGACTCCTGACCAGACTCGCAACTCCCGCCTCGCAT...CCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAAGGAACCGCGGCGCTaGAGTGGGTCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRKEPRR*SGSPGP
Trigger: AGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCCCTGACATCCTGGCCTaGGGGACCTTGCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYAPDILA*GTLPGL
Trigger: CAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGG...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGATCTTGGCTGAGCCGGTaGCCTGCAGGCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRSWLSR*PAGSSR
Trigger: GCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGA...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCCTCAGCATATTTGCCCTGTTTCAGGTAACAGGAAGCCAGGTTGTTCTTGGTCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLSIFALFQVTGSQVVLGLCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...ACCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCAGACACTCAATGGTCTaGGACAGGCTTTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: SLDSAWKKGLLMPPSSAPRHSMV*DRLCST
Trigger: CGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCT...GGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCRCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCTCATCCACAGACCCAAACTCCTGTACATGGGCACGGGTCAGGATCTCTTTGCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GSSTDPNSCTWARVRISLHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...CAAAGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYAVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000479388.5
CDS-3UTR CCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGTGTCCCACCCTCATaGTGCCGGCTTTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLGVPPS*CRLLLI
Trigger: AATGAGCAAAAGCCGGCACCATGAGGGTGGGACACC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAGGCCCCGGGAGACCTaGAGGGGTGCTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRRPRET*RGAALG
Trigger: ACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGAACATCATTTTGGGTaGCAGCATGTCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEEHHFG*QHVRKG
Trigger: GCCTTTCCTGACATGCTGCCACCCAAAATGATGTTC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACTCCACAATGCCCGATaGTGCAGGAAAGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLLHNAR*CRKEWE
Trigger: CTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYRVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTTTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCAATAGCGACCTTGGGCTaGGTACTGGATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAIATLG*VLDHQV
Trigger: AACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTAT...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGQPQHI*PVSGNR
Trigger: CCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCCAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPQPQHI*PVSGNR
Trigger: CCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLDLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGGGTTGAATGTCAGCTaGTTGAAGAGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPGLNVS*LKRGPW
Trigger: CCATGGACCTCTCTTCAAGCAGCTGACATTCAACCC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATCCAGGCCTGACATCCTaGCCTGGGGGACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYPGLTS*PGGPCP
Trigger: CGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGG...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCCCCAGGATCTCCTCTTaGCTGAGCCGGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYAPRISS*LSRWPA
Trigger: TGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGG...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGSLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACACCCCCTCCTGTGGTaGCCACTCCTCGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGHPLLW*PLLGPV
Trigger: CACTGGGCCGAGGAGTGGCCACCACAGGAGGGGGTG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGAGGGTGGCCACGGCCTaGTGTGCGCTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRERVATA*CALQVL
Trigger: GAGGACCTGGAGCGCACATCAGGCCGTGGCCACCCT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCCATGGTGCTGGCACTaGGGCCCCGGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREPWCWH*GPGRPG
Trigger: TCCAGGTCTCCCGGGGCCTCAGTGCCAGCACCATGG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp TCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCGAGGGCAAGGAATACTaGCAGCAGGATGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SLGSLDSAWKKGLLMPPSEGKEY*QQDGQV
Trigger: GACCTGACCATCCTGCTGTCAGTATTCCTTGCCCTC...GGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: ESLSLRELRIIRITGQCLIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGTCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: ESLSLRELRIIRITGQCLSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp GAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: EASSPPSNFTLSPGPSWEVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...CTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR GCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTCAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPQPQHI*PVSGNR
Trigger: CCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTGACCACGGGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGAAGGTGAAAGTGCTTTaGAGATCACCGGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTTGQAIAGVLFLLIRKEKVKVL*RSPVVQ
Trigger: CTGCACAACCGGTGATCTGCAAAGCACTTTCACCTT...CTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATGGGGTCTGCGGGCATaGGAGGCGGGAGTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGWGLRA*EAGVAS
Trigger: ACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGAPART*RPNDPE
Trigger: CTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAAAGGAACCGCGGCGCTaGAGTGGGTCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGKEPRR*SGSPGP
Trigger: AGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTT...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPTQSLP*FCLCHG
Trigger: ACCGTGACAGAGACAAAACCATGGAAGTGACTGGGT...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259708.7
ENST00000394056.6
CDS-3UTR CCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCLCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTGGCGACATCAGGGTaGCCACGGCCTGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGVATSG*PRPDVR
Trigger: GCGCACATCAGGCCGTGGCCACCCTGATGTCGCCAC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGCTTCATGTTGCTGCTaGAGGGCCGAGGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRASCCC*RAEAQS
Trigger: GGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGATAGCCACCACTTTTaGGCATTATTACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGDSHHF*ALLPVS
Trigger: ACTCACTGGTAATAATGCTCAAAAGTGGTGGCTATC...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR TCA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGACGAGATACTTAAGGTaGAAGTGCTTTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGTRYLR*KCFADH
Trigger: GTGATCTGCAAAGCACTTTCACCTTAAGTATCTCGT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: ESLSLRELRIIRITGQCLSSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAATAGAACGGCGAAGCTaGCGGGCCTTCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRIERRS*RAFSCT
Trigger: GGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTAT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCCATCCTCATCATACTaGCGCAGCTGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCPSSSY*RSCPRN
Trigger: GTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGG...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCCACGGGACAAGCCATTaGTGGGGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYAHGTSH*WGPLPP
Trigger: AGGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTG...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGATGGGGCTGCTCACTTTaGAGGCCTTGTACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRWGCSL*RPCTSL
Trigger: GAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCA...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYRASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRLCSGG*LEPASP
Trigger: AGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCGCTGTAGCCGCTGCTaGGTGCCAGCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRERCSRC*VPASSS
Trigger: GGATGAGCTGGCTGGCACCCAGCAGCGGCTACAGCG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCTGCCTGCTTACAGAGTaGCACGGCCACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCCLLTE*HGHLIA
Trigger: CGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCA...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LGASELATLEDHRVQRGCSLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRRGSVP*SFLTKS
Trigger: ACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGAATGGGAGGTCTGCTaGACGGCTGCCGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREEWEVC*TAAGSQ
Trigger: TTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR TCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGAGGATCTCCTCTTGGCTaGGCCGGTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGGSPLG*AGGLQA
Trigger: AGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCC...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACAGCCCCCAACCCTCTaGCTGAAAAGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGQPPTL*LKSQQQ
Trigger: CTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGAGGGCAGCAGATGGATaGGCTAAGAGAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ESLSLRELRIIRITGQCLRAADG*AKRGQN
Trigger: GTTTTGGCCTCTCTTAGCTCATCCATCTGCTGCCCT...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGCCTGCAAGCTGTCCTaGTTTTCTCCGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRACKLS*FSPAWR
Trigger: TCTCCAAGCCGGAGAAAATCAGGACAGCTTGCAGGC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTGGCCTGGGGGACCTTaGCCGGTCTGGTCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREWPGGP*PVWSLQ
Trigger: TTGGAGTGACCAGACCGGGCAAGGTCCCCCAGGCCA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS-3UTR GCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGAGCAGGCTCATCCCGCTaGCCCAACACCAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGAGSSR*PNTRPD
Trigger: GTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGC...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACGGCCTGGTGTTCACTaGGTAGGGCCTCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGRPGVH*VGPLAL
Trigger: AAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYASWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATTGCCGGGCCTTCTCATaGACCAGCCCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYCRAFS*TSPSSW
Trigger: CCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCA...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCCACAGCCTGTTCACTaGGCTGTAGCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREPQPVH*AVAAAG
Trigger: CCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGATGGCCTGGGGGACCTTaGCCGGTCTGCAATCTGCCG +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGWPGGP*PVCNLP
Trigger: CGGCAGATTGCAGACCGGGCAAGGTCCCCCAGGCCA...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGAGGGCCTCTAGCCCTTaGCTGACCAGCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRERASSP*LTSRVL
Trigger: GAGCACACGGCTGGTCAGCCAAGGGCTAGAGGCCCT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGGGACAAGCCATTGCTaGGGTCCTCTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRGTSHC*GPLPPH
Trigger: ATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCCC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCAGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSAASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCTGCCCCTCGTAGATaGCCAGTGCTCGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGAAPRR*PVLAGS
Trigger: ACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCATCACTGGACAGTGCCTaGAAGAAAGGACTTCTTATG +
Preference number: 4 (lower is better)
Translates to: GSLDSAWKKGLLMPPSSASLDSA*KKGLLM
Trigger: CATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGA...TGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCCCCAACCCTCTGACTaGAAAGCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREPQPSD*KASSRL
Trigger: CAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATCTCCGACTCCACTGTaGTCAGGTGGCTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGSPTPL*SGGWLE
Trigger: CTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATTCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATCCACCCTGCTGAGCTaGTGTAGCACCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGSTLLS*CSTLTT
Trigger: CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCAACGTCCGCAACCTTaGTGGGATCTCATATCCACC +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCQRPQP*WDLIST
Trigger: GGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTG...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCTTTGCAGCACGGCCTaGTGTTCACTGCGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRELCSTA*CSLRRA
Trigger: GGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGCATCCAGGGAATCCTTaGTGGCATCGCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ESLSLRELRIIRITGQCLHPGNP*WHRLLS
Trigger: AGAAAGAAGGCGATGCCACCAAGGATTCCCTGGATG...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: NFTLSPGPSWEVLLPSLSSLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...GGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGSPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCATACTGACAGCAGGATaGTCAGGTCCCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCILTAG*SGPKVL
Trigger: GAGCACCTTGGGACCTGACCATCCTGCTGTCAGTAT...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR TCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGATTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAAGCAGGCTGCATCTCTaGGGGCCATACCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGSRLHL*GPYLLC
Trigger: ACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCT...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGSWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGACCTGGAGGGGTaGTGCACTAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREGDLEG*CTRLVQ
Trigger: CTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGGGTTGAATGTCAGCTaGTTGAAGAGAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRGLNVS*LKRGPW
Trigger: CCATGGACCTCTCTTCAAGCAGCTGACATTCAACCC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGATGTGGCTGCCGCTCTTaGCGGTACTGCCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGCGCRS*RYCPFK
Trigger: TTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACA...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347162.10
ENST00000467906.5
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTGGGTCTCCTGGGCCTaGAAACGCAGTAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREWVSWA*KRSRGV
Trigger: CACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYRPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGGTGTCCCACCCTCATaGTGCCGGCTTTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGGVPPS*CRLLLI
Trigger: AATGAGCAAAAGCCGGCACCATGAGGGTGGGACACC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCTCCAGGGCCCTCCTaGGAGGTCCTTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESPGPS*EVLLPS
Trigger: TGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATCCAAAGCAAGGATGTTaGGCATGGTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYPKQGC*AWWRHQ
Trigger: CTGATGTCGCCACCATGCTCAACATCCTTGCTTTGG...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCATGGCCTCCCTGCTaGAGACACTCAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESWPPC*RHSMVW
Trigger: CCAGACCATTGAGTGTCTGCAGCAGGGAGGCCATGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCCTCATGGCCTCCCTaGTGCAGACACTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESSWPP*CRHSMV
Trigger: GACCATTGAGTGTCTGCAGCAGGGAGGCCATGAGGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AGCCTCAGCATATTTGCCCTGTTTCAGGTAACAGGAAGCCAGGTTGTTCTTGGTGTTGTTCAGCTGTTTTaGCACATCTGGATGATTCGT +
Preference number: 4 (lower is better)
Translates to: SLSIFALFQVTGSQVVLGVVQLF*HIWMIR
Trigger: ACGAATCATCCAGATGTGGCAAAACAGCTGAACAAC...ACCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGACAGCCTCAGCATATTTaGCCTGTTTCAGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRQPQHI*PVSGNR
Trigger: CCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTG...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAAGAGTTCACTGCTTCTaGGGAGCACATCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGRVHCF*GAHPGS
Trigger: AGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCT...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCTGAGGGCCATACCTaGTTTGTACCCACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESEGHT*FVPTLG
Trigger: CCCCAAGGTGGGTACAAAGCAGGTATGGCCCTCAGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp AAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCAGAAAGGACTTCTTATaGCTCCTTCCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: KESLSLRELRIIRITGQCRKDFL*LLPQHP
Trigger: AGGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCT...GCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATCCAGGGAATCCTTGGTaGCATCGCCTTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ELRIIRITGQCLEERTSYPGNPW*HRLLSP
Trigger: AGGAGAAAGAAGGCGATGCCACCAAGGATTCCCTGG...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCGTCCGCAACCTTGCTaGGATCTCATATCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRERPQPC*DLISTL
Trigger: CAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACCAAACTCCTGTACATaGGCACGGGTCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGPNSCT*ARVRIS
Trigger: AGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGACCTGGAGGGGTGCTaGACTAGGTTGGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREDLEGC*TRLVQI
Trigger: TATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACCTTGGGCTGCGTACTaGATCACCAGGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGPWAAY*ITRLCN
Trigger: GTTGCACAACCTGGTGATCCAGTACGCAGCCCAAGG...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACTGTTTTGCCACATCTaGATGATTCGTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGLFCHI*MIRAQD
Trigger: GTCCTGGGCACGAATCATCCAGATGTGGCAAAACAG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR TCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTTTGCCACATCTGGATaGTTCGTGCCCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREFATSG*FVPRTF
Trigger: AAAGGTCCTGGGCACGAATCATCCAGATGTGGCAAA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGAGCTGCAGACACTCAATaGTCTGGGACAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGAADTQ*SGTGFA
Trigger: TGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGC...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGATCCAGATGGGCTTGTaGTCATCATCCACAGACCCA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREIQMGL*SSSTDP
Trigger: TGGGTCTGTGGATGATGACCACAAGCCCATCTGGAT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREIVQGG*SLHVAA
Trigger: AGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTAT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGCATCATTCAGCAGGTaGGCAGCTTCCTTATACTTA +
Preference number: 4 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGASFSR*AASLYL
Trigger: TAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGC...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGCAGCAGCAATCTTCTaGTTAAACTGCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREAAAIF*LNCSPS
Trigger: TGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR GCA 90 bp TATAAAAAGGAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGAAGGATCACTGGACAGTaGCTGGAAGAAAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: YKKESLSLRELRIIRITGRITGQ*LEERTS
Trigger: AGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCT...TCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTCCTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp TTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LRIIRITGQCLEERTSYASLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...GGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CCA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCCTTATACTTATTCTaGTCACGATACACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESLYLF*SRYTKA
Trigger: TGCTTTGGTGTATCGTGACCAGAATAAGTATAAGGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS TCA 90 bp GAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGCAATCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EPVACRLIPLPQHQA*HPGLGDLARSAICR
Trigger: CCGGCAGATTGCAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000458460.6
ENST00000467906.5
ENST00000470728.5
CDS CCA 90 bp ACGGCTGCCGGGTCGCAAGGAACCGCGGCGCTGGAGTGGGTCTCCTaGGCCTGGAAACGCAGTAGAGGAGTGCCTCGGGCTGTCGACCTG +
Preference number: 5 (lower is better)
Translates to: TAAGSQGTAALEWVS*AWKRSRGVPRAVDL
Trigger: CAGGTCGACAGCCCGAGGCACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTTGCGACCCGGCAGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS TCA 90 bp GAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGGTCACTCCAAA +
Preference number: 5 (lower is better)
Translates to: EPVACRLIPLPQHQA*HPGLGDLARSGHSK
Trigger: TTTGGAGTGACCAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS TCA 90 bp GAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTACAAACAGGCTC +
Preference number: 5 (lower is better)
Translates to: EPVACRLIPLPQHQA*HPGLGDLARSTNRL
Trigger: GAGCCTGTTTGTAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472792.1
CDS-3UTR CAA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS TCA 90 bp GAGCCGGTGGCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTAGGGAGAAACAA +
Preference number: 5 (lower is better)
Translates to: EPVACRLIPLPQHQA*HPGLGDLARSREKQ
Trigger: TTGTTTCTCCCTAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481888.1
CDS-3UTR CAA 90 bp ACCAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSRVLPRISSWLSRWPAGPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...GCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS GCA 90 bp GAAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTGCGGGCATaGGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCATGCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: EGCFHSGCRRWGLRA*EAGVASLVRSHAGP
Trigger: CGGACCTGCATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCAGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp GCCGGGAAGAAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTaGGGGCATGCGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: AGKKAASIRAAGDGV*GHARRELRVWSGVM
Trigger: CATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCAGCCTTCTTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp GGAGGTGTGGATGGACGACTGAGGTCCGCAGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAGGTCACTGAGTCAGTCGGTGGCGCA +
Preference number: 5 (lower is better)
Translates to: GGVDGRLRSAAPART*RPNDPEVTESVGGA
Trigger: TGCGCCACCGACTGACTCAGTGACCTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGCTGCGGACCTCAGTCGTCCATCCACACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS CCA 90 bp GCCTGCTGGTGCATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGGTaGCCACTCCTCGGCCCAGTGAGTAGTGGAGATTCAGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ACWCMSSPVRHPLLW*PLLGPVSSGDSGGE
Trigger: CTCCCCACCTGAATCTCCACTACTCACTGGGCCGAGGAGTGGCCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp GCTGCTCGCTTCATGTTGCTGCTGGAGGGCCGAGGCTCAGTCCCCTGGAGCTTCCCCTTGGATGGGGACTaGGGAGTGGAGGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: AARFMLLLEGRGSVPWSFPLDGD*GVEGLH
Trigger: GTGCAGCCCCTCCACTCCCAAGTCCCCATCCAAGGG...GAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp CAATGCCCGATGATGCAGGAAAGAATGGGAGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGCGGCGCTGGAGTGGGTCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QCPMMQERMGGLLNG*RVARNRGAGVGLLG
Trigger: GCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTCTTTCCTGCATCATCGGGCATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS GCA 90 bp GGGGACCTTGCCCGGTCTGCAATCTGCCGGTGTGGCTGCCGCTCTTaGCGGTACTGCCCCTTTAAATCCATGATGGCTGCCGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: GDLARSAICRCGCRS*RYCPFKSMMAAARG
Trigger: GCCTCGAGCGGCAGCCATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGCAAGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp AGTGCCTGCTGGTGCATGTCGAGCCCTGTGAGGCACCCCCTCCTGTaGTGGCCACTCCTCGGCCCAGTGAGTAGTGGAGATTCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SACWCMSSPVRHPLL*WPLLGPVSSGDSGG
Trigger: CCCACCTGAATCTCCACTACTCACTGGGCCGAGGAGTGGCCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTAGAGCTGCCCGCGGATaGGCTCTCACGGCGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISRAARG*ALTAFR
Trigger: CCTGAACGCCGTGAGAGCCAATCCGCGGGCAGCTCT...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CAGCCGTGTGCTCCCCAGGATCTCCTCTTGGCTGAGCCGGTGGCCTGCAGGCTCAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: QPCAPQDLLLAEPVACRLSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...GAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp GAGGGAGGGAGTAAGAGCGGCCAGGGCAAGGCAGCTTGGCTGGCCAGCCCCCAAGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: EGGSKSGQGKAAWLASPQATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...TTGGGGGCTGGCCAGCCAAGCTGCCTTGCCCTGGCCGCTCTTACTCCCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTCCCTGCTGCAGACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTCTGGCCTGGGGGACCTaGCCCGGTCTGTGTACAGAG +
Preference number: 5 (lower is better)
Translates to: LPAADTQWSGTGFAARPGLAWGT*PGLCTE
Trigger: CTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCAG...ACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCAGCAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: LGASELATLEDHRVQRGCAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCTGGCCTGGGGGACCTaGCCCGGTCTGTGTACAGAG +
Preference number: 5 (lower is better)
Translates to: YPPWGLRASYSRGPQGAELAWGT*PGLCTE
Trigger: CTCTGTACACAGACCGGGCAAGGTCCCCCAGGCCAG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS GCA 90 bp GGCCCTGGCTGTGGCACTCAGGCCAGAGCACGGAAGAAACTGTTCTaGAGCCAGAGAGTCAGAGGATCTGCCAGCAAGAGGCGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GPGCGTQARARKKLF*SQRVRGSASKRRVW
Trigger: CCAGACACGCCTCTTGCTGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTGCTCTGGCCTGAGTGCCACAGCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCTGGCCTGGGGGACCTaGCCCGGTCTGGTCACTCCA +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFLAWGT*PGLVTP
Trigger: TGGAGTGACCAGACCGGGCAAGGTCCCCCAGGCCAG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS-3UTR CAA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LGASELATLEDHRVQRGCGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGASELATLEDHRVQRGCPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTTCATGGTGCCGGCTTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISSWCRL*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGA...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CAA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGCATGCGAGGCGGGAGTaGCGAGTCTGGTCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: RPGGRVECQLLEERSMVLHARRE*RVWSGV
Trigger: GACTCCTGACCAGACTCGCAACTCCCGCCTCGCATG...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCTGGCCTGGGGGACCTaGCCCGGTAAACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LCTHLGASELATLEDHRVLAWGT*PGKQAL
Trigger: CAGAGCCTGTTTACCGGGCAAGGTCCCCCAGGCCAG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479388.5
CDS CCA 90 bp GATTCTGGGTGGGAGTATTCAGGAACAGGTGGAAGGGGAGCCTACTaGGACGTGGCAAGACTGGCAGGGGCACAGAGGAGCCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: DSGWEYSGTGGRGAY*DVARLAGAQRSQKV
Trigger: CACCTTCTGGCTCCTCTGTGCCCCTGCCAGTCTTGCCACGTCCCAGTAGGCTCCCCTTCCACCTGTTCCTGAATACTCCCACCCAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCCCAGGATCTCCTCTaGGCTGAGCCGGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPQDLL*AEPVAC
Trigger: GCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GACACTCAATGGTCTGGGACAGGCTTTGCAGCACGGCCTGGTGTTCACTGCGTAGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: DTQWSGTGFAARPGVHCVGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...TACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCTHLGASELATLEDHRVPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GTCAGTGCCCTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCAGCCGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: VSALSPGPQGTFLQGLSSRVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...GCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGGCACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: YPPWGLRASYSRGPQGAEVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: LGASELATLEDHRVQRGCVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGCACGACTGGAGCTCCTaGGCTACCCGGGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGHDWSS*ATRGLP
Trigger: TGGAAGGCCCCGGGTAGCCAAGGAGCTCCAGTCGTG...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CACCAAGAGTTCACTGCTTCTGCGGAGCACATCCCGGATCTTGCCAAGAGAGCCCCTCAGGGAACCCCCTaGGATGGGGACTTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: HQEFTASAEHIPDLAKRAPQGTP*DGDLGV
Trigger: CACTCCCAAGTCCCCATCCAAGGGGGTTCCCTGAGG...GGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp ACCATCAGCCACTGTCTCCGGGACCGCAGGGCACATTCCTCCAGGGTCTCAGCATGTTCACTGTGGGGTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TISHCLRDRRAHSSRVSACSLWG*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAACCCCACAGTGAACA...TGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGTGGCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469987.1
CDS GCA 90 bp ACCGGTTGTGCAGGTTTCAGTAATAACGTTTCGAGTGCCTGCTGGTaGATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGGTGGCCACTC +
Preference number: 5 (lower is better)
Translates to: TGCAGFSNNVSSACW*MSSPVRHPLLWWPL
Trigger: GAGTGGCCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGCACAACCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp ATCCAGCTTGGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTATTaGGGAGCGACGGCGCCGGACAGTCAACGTCATCTAGGAGCACCG +
Preference number: 5 (lower is better)
Translates to: IQLGLQFSARLLLRY*GATAPDSQRHLGAP
Trigger: CGGTGCTCCTAGATGACGTTGACTGTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCAAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp GCCCGGTCTGCAATCTGCCGGTGTGGCTGCCGCTCTTGCCGGTACTaGCCCTTTAAATCCATGATGGCTGCCGCTCGAGGCAATTGTTTT +
Preference number: 5 (lower is better)
Translates to: ARSAICRCGCRSCRY*PFKSMMAAARGNCF
Trigger: AAAACAATTGCCTCGAGCGGCAGCCATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp AAGACGCCCAATTCCCGTCTCCTTCCCCAAGCCAGCCTCCCTCATTaGAGGCCTAGGGAGCTACTGTCTCCCAGGAAGGGAATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: KTPNSRLLPQASLPH*RPRELLSPRKGMRE
Trigger: CTCTCTCATTCCCTTCCTGGGAGACAGTAGCTCCCTAGGCCTGCAATGAGGGAGGCTGGCTTGGGGAAGGAGACGGGAATTGGGCGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS CCA 90 bp CGGGGCCTGTTTCCTAGTCACGCGACATTAGAGCTGCCCGCGGATTaGCTCTCACGGCGTTCAGGTAGGAAAGGAGGTGTGTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: RGLFPSHATLELPAD*LSRRSGRKGGVYPA
Trigger: AGCTGGATACACACCTCCTTTCCTACCTGAACGCCGTGAGAGCCAATCCGCGGGCAGCTCTAATGTCGCGTGACTAGGAAACAGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp GAGCCAGCATCACCTAGGTGGGCACATCCCCTGAGCTCCAGATTCTaGGTGGGAGTATTCAGGAACAGGTGGAAGGGGAGCCTACTGGGA +
Preference number: 5 (lower is better)
Translates to: EPASPRWAHPLSSRF*VGVFRNRWKGSLLG
Trigger: TCCCAGTAGGCTCCCCTTCCACCTGTTCCTGAATACTCCCACCCAGAATCTGGAGCTCAGGGGATGTGCCCACCTAGGTGATGCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS CCA 90 bp ACTCCACTGTGCTCAGGTGGCTGGCTAGAGCCAGCATCACCTAGGTaGGCACATCCCCTGAGCTCCAGATTCTGGGTGGGAGTATTCAGG +
Preference number: 5 (lower is better)
Translates to: TPLCSGGWLEPASPR*AHPLSSRFWVGVFR
Trigger: CCTGAATACTCCCACCCAGAATCTGGAGCTCAGGGGATGTGCCCACCTAGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PAPNPLTEKPAAGCISEGSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...GCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: HRSIFTSLEFHTVSRALLPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...CAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PWGLRASYSRGPQGAERVSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCACCCTCATGGTGCCGGCTCATCCACAGACCCAAACTCCTGTACATGGGCACGAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PPSWCRLIHRPKLLYMGTSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...CGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGAGCCGGCACCATGAGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTCATGGTGCCGGCTTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTSWCRL*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGA...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CAA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCAGCACATCCCGGATCTaGCCAAGAGAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTSTSRI*PREPLL
Trigger: GAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCT...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTAGCACATCCCGGATCTaGCCAAGAGAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: LGASELATLEDHRVQRGCSTSRI*PREPLL
Trigger: GAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCT...ACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: IFTSLEFHTVSRALLGGPDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...AGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp CAGATCACCGGTTGTGCAGGTTTCAGTAATAACGTTTCGAGTGCCTaGTGGTGCATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: QITGCAGFSNNVSSA*WCMSSPVRHPLLWW
Trigger: CCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGCACAACCGGTGATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp TCTGCGGGCATGCGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCATaGAGGTCCGTGACCTTGGATAAGGCACACTTAGCCTCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: SAGMRGGSCESGQES*RSVTLDKAHLASAF
Trigger: AAAAGCTGAGGCTAAGTGTGCCTTATCCAAGGTCACGGACCTGCATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp TCAGGTAGGAAAGGAGGTGTGTATCCAGCTTGGGCTCCAGTTTTCTaGCCGCCTCCTTTTACGTTATTGCGGAGCGACGGCGCCGGACAG +
Preference number: 5 (lower is better)
Translates to: SGRKGGVYPAWAPVF*PPPFTLLRSDGAGQ
Trigger: CTGTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCAAGCTGGATACACACCTCCTTTCCTACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp CTTGGGAGTGGAGGGGCTGCACCCTCCTTGCCTCTGCCACTTTCTTaGTCTCTACAGAAGGCAGAAACAGAAGCCACGACTGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: LGSGGAAPSLPLPLS*SLQKAETEATTGAP
Trigger: AGGAGCTCCAGTCGTGGCTTCTGTTTCTGCCTTCTGTAGAGACCAAGAAAGTGGCAGAGGCAAGGAGGGTGCAGCCCCTCCACTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp ATCACCGGTTGTGCAGGTTTCAGTAATAACGTTTCGAGTGCCTGCTaGTGCATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ITGCAGFSNNVSSAC*CMSSPVRHPLLWWP
Trigger: TGGCCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGCACAACCGGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGCACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: PWGLRASYSRGPQGAERVHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGACCTGGGGGCCGGGTTGAATGTCAGCTGCTTGAAGAGAGGTCCATGGTGCTGTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: RPGGRVECQLLEERSMVLSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...CAGCACCATGGACCTCTCTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp TTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: FHTVSRALLGGPSTITLPSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...GGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CAA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCTGCTCGCTTCATGTaGCTGCTGGAGGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLAARFM*LLEGRG
Trigger: GCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTTTGAATGTCAGCTGCTaGAAGAGAGGTCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISLNVSC*KRGPWC
Trigger: GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAA...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTCCTCCTTTTACGTTATaGCGGAGCGACGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: PQKHLHLPRISHCLQGPPPPFTL*RSDGAG
Trigger: TCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGG...AGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp GGGGGACCTTGCCCGGTCTGGTCACTCCAAACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGTCACCTACAAACAGGCTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GGPCPVWSLQTQSLP*FCLCHGHLQTGSER
Trigger: CCTCTCAGAGCCTGTTTGTAGGTGACCGTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGACCGGGCAAGGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: LCTHLGASELATLEDHRVSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TCAGAGGATCTGCCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: SEDLPCPKSRSPAFPPLLATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...AAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAGATCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp TTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: FHTVSRALLGGPSTITLPSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...GGGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CAA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: LCTHLGASELATLEDHRVSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCATGGTGCCGGCTTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSWCRL*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000479388.5
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGTCATGGTGCCGGCTTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGSWCRL*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGA...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGTGGGGCTGCTCACTTaGCAGGCCTTGTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPVGLLT*QALYQP
Trigger: AGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCAC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTCCGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: WGLRASYSRGPQGAERVSGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...GGACACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGTGTGGCAGCCACAGCAGGATGGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: SVAATAGWSGPKVLSRMLGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...TAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTGGCTGCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CCACCCTCATGGTGCCGGCTCATCCACAGACCCAAACTCCTGTACATGGGCACGTTGAATGTCAGCTGCTaGAAGAGAGGTCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: PPSWCRLIHRPKLLYMGTLNVSC*KRGPWC
Trigger: GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAA...CGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGAGCCGGCACCATGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp CCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGAGGGTGTTGAATGTCAGCTGCTaGAAGAGAGGTCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: PWGLRASYSRGPQGAERVLNVSC*KRGPWC
Trigger: GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAA...CACCCTCTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCTGGCCAGCCCCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTCTGATTTTCTCCGGCTaGGAGATAGCCACCACTTTT +
Preference number: 5 (lower is better)
Translates to: GWPAPNPLTEKPAAGCISLIFSG*EIATTF
Trigger: AAAAGTGGTGGCTATCTCCAAGCCGGAGAAAATCAG...AGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGGGGCTGGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 90 bp CTACAAACAGGCTCTGAGAGGAATCACCGTAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGAATGGGAGGTCTGCTGAACGGCTGC +
Preference number: 5 (lower is better)
Translates to: LQTGSERNHRRVPPQ*PMMQERMGGLLNGC
Trigger: GCAGCCGTTCAGCAGACCTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCTACGGTGATTCCTCTCAGAGCCTGTTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000472792.1
ENST00000481499.5
CDS CCA 90 bp TCTGCCAGCAAGAGGCGTGTCTGGGAAAGGGGAGGGAGGAACACCTaGTCACTCCAAACCCAGTCACTTCCATGGTTTTGTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SASKRRVWERGGRNT*SLQTQSLPWFCLCH
Trigger: GTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGGTGTTCCTCCCTCCCCTTTCCCAGACACGCCTCTTGCTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS CCA 90 bp TATCTTGACTTCCATGTATACCTGGAGGGCCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGTTCACTGCTTCTGCGGAGCACATCC +
Preference number: 5 (lower is better)
Translates to: YLDFHVYLEGRGSVP*SFLTKSSLLLRSTS
Trigger: GGATGTGCTCCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGGTATACATGGAAGTCAAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463168.1
CDS CCA 90 bp GTGTACACCACAGGCTTCTGTCCATCCCCATCCTTCCCCTCCCTATaGGCTCAGCCTGTTCATCTTCCAGGTTTGTGTCACCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: VYTTGFCPSPSFPSL*AQPVHLPGLCHLHP
Trigger: TGGATGGAGGTGACACAAACCTGGAAGATGAACAGGCTGAGCCCATAGGGAGGGGAAGGATGGGGATGGACAGAAGCCTGTGGTGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp TGGCTCTCACGGCGTTCAGGTAGGAAAGGAGGTGTGTATCCAGCTTaGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTATTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: WLSRRSGRKGGVYPA*APVFCPPPFTLLRS
Trigger: GCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCAAGCTGGATACACACCTCCTTTCCTACCTGAACGCCGTGAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp TGCCACACTGGGGCACCCATTCTACCCAAACTCTCTCTCCATGGCTaGCCCGTTGACTTCCTCCCTGTTTCTCTCCGAGATACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CHTGAPILPKLSLHG*PVDFLPVSLRDTSP
Trigger: TGGAGAAGTATCTCGGAGAGAAACAGGGAGGAAGTCAACGGGCCAGCCATGGAGAGAGAGTTTGGGTAGAATGGGTGCCCCAGTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS-3UTR CAA 90 bp CTTTGTACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LCTHLGASELATLEDHRVSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...CACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ATTTCACACTGTCTCCAGGGCCCTCCTGGGAGGTCCTTCTACCATCACTCTCCCCACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: ISHCLQGPPGRSFYHHSPHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...GGGAGAGTGATGGTAGAAGGACCTCCCAGGAGGGCCCTGGAGACAGTGTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTTCCACGGCCTCATACTaGCCCTGGTTTTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSTASY*PWFWHK
Trigger: CTTGTGCCAAAACCAGGGCAAGTATGAGGCCGTGGA...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TACCCACCTTGGGGCCTCAGAGCTAGCTACTCTAGAGGACCACAGGGTGCAGAGCGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: YPPWGLRASYSRGPQGAERVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...CTCTGCACCCTGTGGTCCTCTAGAGTAGCTAGCTCTGAGGCCCCAAGGTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCCAACCCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCCGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: PNPLTEKPAAGCISEGHTRVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...GGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATCATGGTGCCGGCTTTaGCTCATTTCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPSWCRL*LISSRS
Trigger: GGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000479388.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACAGCACATCCCGGATCTaGCCAAGAGAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHSTSRI*PREPLL
Trigger: GAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCT...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACAGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGAGGTGTGTATCCAGCTaGGGCTCCAGTTTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: TEASSPPSNFTLSPGPSWRCVSS*GSSFLP
Trigger: GGGCAGAAAACTGGAGCCCAAGCTGGATACACACCT...CCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp AGGGGAGGGAGGAACACCTGGTCACTCCAAACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGTCACCTACAAACAGGCTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RGGRNTWSLQTQSLP*FCLCHGHLQTGSER
Trigger: CCTCTCAGAGCCTGTTTGTAGGTGACCGTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGGTGTTCCTCCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394056.6
ENST00000481499.5
CDS CCA 90 bp ACCTACAGCAAGAGGCGTGTCTGGGAAAGGGGAGGGAGGAACACCTaGTCACTCCAAACCCAGTCACTTCCATGGTTTTGTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: TYSKRRVWERGGRNT*SLQTQSLPWFCLCH
Trigger: GTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGGTGTTCCTCCCTCCCCTTTCCCAGACACGCCTCTTGCTGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp CTGCCCTGCCCAAAGTCCAGAAGTCCAGCGTTCCCACCCCTTCTTTCACCACTTGTCACTTCCATGGTTTaGTCTCTGTCACGGTCACCT +
Preference number: 5 (lower is better)
Translates to: LPCPKSRSPAFPPLLSPLVTSMV*SLSRSP
Trigger: AGGTGACCGTGACAGAGACAAAACCATGGAAGTGAC...AAGTGGTGAAAGAAGGGGTGGGAACGCTGGACTTCTGGACTTTGGGCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481499.5
CDS-3UTR CAA 90 bp ACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTGTACCCTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TEKPAAGCISEGHTCFVPSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...GGGTACAAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GSSNLLVKLLPFTVPPRGSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...ACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTCTGACTGAAAAGCCAGCAGCAGGCTGCATCTCTGAGGGCCATACCTGCTTTCACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: PLTEKPAAGCISEGHTCFHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...AAAGCAGGTATGGCCCTCAGAGATGCAGCCTGCTGCTGGCTTTTCAGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAAGCACATCCCGGATCTaGCCAAGAGAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLSTSRI*PREPLL
Trigger: GAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCT...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGTCACTTCCATGGTTTaGTCTCTGTCACGGTCACCT +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGVTSMV*SLSRSP
Trigger: AGGTGACCGTGACAGAGACAAAACCATGGAAGTGAC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259708.7
ENST00000394056.6
CDS-3UTR CAA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: ESLSLRELRIIRITGQCLGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCATCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCCTCCTTCCTCAGCACCCTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLDSAWKKGLLMPPSSAPSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...GGGTGCTGAGGAAGGAGGCATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp GGACAAGCCATTGCTGGGGTCCTCTTCCTCCTCATTAGGAAAGAGGTCATCCAGTCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: GQAIAGVLFLLIRKEVIQSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...CTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000481499.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCAAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: DPKGSSNLLVKLLPFTVPSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...TGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRSTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGCACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: KGSSNLLVKLLPFTVPPRHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...CCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AGAAGCATCTTCACCTCCCTCGAATTTCACACTGTCTCCAGGGCCCTCCTGGGACGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RSIFTSLEFHTVSRALLGRVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...TCCCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000469987.1
CDS-3UTR CAA 90 bp AGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGGTGGGGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: SSNLLVKLLPFTVPPRGGGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...CCCACCCCTAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS TCA 90 bp GCAAGCTGTCCTGATTTTCTCCGGCTTGGAGATAGCCACCACTTTTaGGCATTATTACCAGTGAGTGTGGACCTAAGGAGCGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASCPDFLRLGDSHHF*ALLPVSVDLRSGSW
Trigger: CCAGCTCCCGCTCCTTAGGTCCACACTCACTGGTAATAATGCTCAAAAGTGGTGGCTATCTCCAAGCCGGAGAAAATCAGGACAGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGTCACTTCCATGGTTTaGTCTCTGTCACGGTCACCT +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHVTSMV*SLSRSP
Trigger: AGGTGACCGTGACAGAGACAAAACCATGGAAGTGAC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259708.7
ENST00000394056.6
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTATCATCCAGGGAATCCTaGGTGGCATCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLSSRES*VASPSF
Trigger: GAAAGAAGGCGATGCCACCAAGGATTCCCTGGATGA...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACACAAGAGGGCCAGGTaGTTCAGCTGTTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLHKRAR*FSCFAT
Trigger: TGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: PKGSSNLLVKLLPFTVPPGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...AGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp ACCCTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACTTGAATGTCAGCTGCTaGAAGAGAGGTCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: TLRAAAIFWLNCSPSLSHLNVSC*KRGPWC
Trigger: GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAA...GTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAAACCTGACGCGCTGTaGGCGGGCCGTGGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRKPDAL*AGRGGE
Trigger: TTCTCCACCACGGCCCGCCAACAGCGCGTCAGGTTT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 90 bp GTAGCCTTCTCAGTGACCCCTCTAAGCCATGAAATCACAGACAGATaGGACCTAGGAGAAGACTGTTGTTCCTGTCTCTGCCCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VAFSVTPLSHEITDR*DLGEDCCSCLCPWK
Trigger: TTTCCAGGGGCAGAGACAGGAACAACAGTCTTCTCCTAGGTCCCATCTGTCTGTGATTTCATGGCTTAGAGGGGTCACTGAGAAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468114.1
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTACGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLRVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTAAGGGCAGCAGCAATCTTCTGGTTAAACTGCTCCCCTTCACTGTCCCACCTAGGGTGCTGCACTAGGTaGGTTCAGATAGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LRAAAIFWLNCSPSLSHLGCCTR*VQIVQG
Trigger: TCCTTGAACTATCTGAACCAACCTAGTGCAGCACCC...TAGGTGGGACAGTGAAGGGGAGCAGTTTAACCAGAAGATTGCTGCTGCCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000453940.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAGGGCCATACCTGCTTaGTACCCACCTTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRRAIPA*YPPWGL
Trigger: GAGGCCCCAAGGTGGGTACAAAGCAGGTATGGCCCT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS GCA 90 bp CTGGAGGGGTGCTGCACTAGGTTGGTTCAGATAGTTCAAGGAGGCTaGTCGCTTCATGTTGCTGCTACAATGGAAAACGGAAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: LEGCCTRLVQIVQGG*SLHVAATMENGRIE
Trigger: CTCAATTCTTCCGTTTTCCATTGTAGCAGCAACATGAAGCGAGCAGCCTCCTTGAACTATCTGAACCAACCTAGTGCAGCACCCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS-3UTR CAA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATCCACGGGACAAGCCATaGCTGGGGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ELRIIRITGQCLEERTSYPRDKP*LGSSSS
Trigger: GGAGGAAGAGGACCCCAGCAATGGCTTGTCCCGTGG...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAGCACATCCCGGATCTaGCCAAGAGAGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRSTSRI*PREPLL
Trigger: GAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGTCTGGGACAGGCTTaGCAGCACGGCCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREGLGQA*QHGLVF
Trigger: GAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGAGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS TCA 90 bp AAGATATCCCTACCTAGTAGCCTTCTCAGTGACCCCTCTAAGCCATaGAATCACAGACAGATGGGACCTAGGAGAAGACTGTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: KISLPSSLLSDPSKP*NHRQMGPRRRLLFL
Trigger: CAGGAACAACAGTCTTCTCCTAGGTCCCATCTGTCTGTGATTTCATGGCTTAGAGGGGTCACTGAGAAGGCTACTAGGTAGGGATATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468114.1
CDS-3UTR CAA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGACCTGGGGGCCGGGTaGAATGTCAGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LLFKKSEIHGPEVRQQREDLGAG*NVSCLK
Trigger: CTTCAAGCAGCTGACATTCAACCCGGCCCCCAGGTC...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATAGCTGCTGTAGCACCTaGACCACGGGACAAGCCATT +
Preference number: 5 (lower is better)
Translates to: ELRIIRITGQCLEERTSYSCCST*TTGQAI
Trigger: AATGGCTTGTCCCGTGGTCAAGGTGCTACAGCAGCT...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp GAATTGAGAATCATTAGGATCACTGGACAGTGCCTGGAAGAAAGGACTTCTTATGCAACGTCCGCAACCTaGCTGGGATCTCATATCCAC +
Preference number: 5 (lower is better)
Translates to: ELRIIRITGQCLEERTSYATSAT*LGSHIH
Trigger: GTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGC...ATAAGAAGTCCTTTCTTCCAGGCACTGTCCAGTGATCCTAATGATTCTCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp AAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGAGTAAGATTGAATGTCAGCTGCTaGAAGAGAGGTCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: KKSEIHGPEVRQQREGVRLNVSC*KRGPWC
Trigger: GCACCATGGACCTCTCTTCAAGCAGCTGACATTCAA...TCTTACTCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGAGCACAGCCAAATTGTaGAGTGTGGCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESTAKL*SVAATA
Trigger: TGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCT...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp TTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGGGACGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LFKKSEIHGPEVRQQREGRVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...TCCCTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS CCA 90 bp ACATACCCTGAATCCAATTTCCCACTACCTCCACTGCTGTCACCCTaGACCAAGCCACTATCAATTCCTACCCAAATTATTACAATAACT +
Preference number: 5 (lower is better)
Translates to: TYPESNFPLPPLLSP*TKPLSIPTQIITIT
Trigger: AGTTATTGTAATAATTTGGGTAGGAATTGATAGTGGCTTGGTCCAGGGTGACAGCAGTGGAGGTAGTGGGAAATTGGATTCAGGGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS-3UTR CAA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGCGGGTCAGGATCTCTTaGTATAGTGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRERVRIS*YSVSAS
Trigger: TGAGGCTGAGACACTATACAAAGAGATCCTGACCCG...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259708.7
ENST00000347162.10
ENST00000394056.6
ENST00000467906.5
ENST00000479388.5
CDS-3UTR CAA 90 bp GAGTCACTGAGTCTCAGAGAATTGAGAATCATTAGGATCACTGGACAGTGCCTGCTGAGTCTCAGAGAATaGAGAATCATTAGGATCACT +
Preference number: 5 (lower is better)
Translates to: ESLSLRELRIIRITGQCLLSLRE*RIIRIT
Trigger: AGTGATCCTAATGATTCTCAATTCTCTGAGACTCAG...CAGGCACTGTCCAGTGATCCTAATGATTCTCAATTCTCTGAGACTCAGTGACTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS-3UTR CAA 90 bp CTTTTATTTAAGAAAAGTGAAATACATGGACCTGAAGTGAGACAGCAGAGGGAGTCCATGAACATCATTTaGGGTGGCAGCATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LLFKKSEIHGPEVRQQRESMNII*GGSMSG
Trigger: TCCTGACATGCTGCCACCCAAAATGATGTTCATGGA...CTCCCTCTGCTGTCTCACTTCAGGTCCATGTATTTCACTTTTCTTAAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS TCA 72 bp GCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: ACRLIPLPQHQA*HPGLGDLARSG
Trigger: ACCAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS TCA 72 bp GCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: ACRLIPLPQHQA*HPGLGDLARSA
Trigger: TGCAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347162.10
ENST00000453940.6
ENST00000458460.6
ENST00000467906.5
ENST00000470728.5
CDS TCA 72 bp GCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: ACRLIPLPQHQA*HPGLGDLARSR
Trigger: CCTAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481888.1
CDS TCA 72 bp GCCTGCAGGCTCATCCCGCTGCCCCAACACCAGGCCTaGCATCCTGGCCTGGGGGACCTTGCCCGGTCTACA +
Preference number: 6 (lower is better)
Translates to: ACRLIPLPQHQA*HPGLGDLARST
Trigger: TGTAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472792.1
CDS CCA 72 bp GGGTCGCAAGGAACCGCGGCGCTGGAGTGGGTCTCCTaGGCCTGGAAACGCAGTAGAGGAGTGCCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: GSQGTAALEWVS*AWKRSRGVPRA
Trigger: AGCCCGAGGCACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTTGCGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS CCA 72 bp ACGGCTGCCGGGTCGCAAGGAACCGCGGCGCTGGAGTaGGTCTCCTGGGCCTGGAAACGCAGTAGAGGAGTG +
Preference number: 6 (lower is better)
Translates to: TAAGSQGTAALE*VSWAWKRSRGV
Trigger: CACTCCTCTACTGCGTTTCCAGGCCCAGGAGACCCACTCCAGCGCCGCGGTTCCTTGCGACCCGGCAGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS CAA 72 bp GCCGGAGATGGGGTCTGCGGGCATGCGAGGCGGGAGTaGCGAGTCTGGTCAGGAGTCATGCAGGTCCGTGAC +
Preference number: 6 (lower is better)
Translates to: AGDGVCGHARRE*RVWSGVMQVRD
Trigger: GTCACGGACCTGCATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp GGAAACGCAGTAGAGGAGTGCCTCGGGCTGTCGACCTaGCCTGGTGCCCAGGGTTGGGAGAGTGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: GNAVEECLGLST*PGAQGWESEMG
Trigger: GCCCATCTCACTCTCCCAACCCTGGGCACCAGGGCAGGTCGACAGCCCGAGGCACTCCTCTACTGCGTTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS GCA 72 bp AAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTaGGGGCATGCGAGGCGGGAGTTGCGAGTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: KAASIRAAGDGV*GHARRELRVWS
Trigger: TGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCAGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp TCTAGGAGCACCGAGCAGCTTGGCCGGGAAGAAGGCTaGTTCCATTCGGGCTGCCGGAGATGGGGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SRSTEQLGREEG*FHSGCRRWGLR
Trigger: CCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCAGCCTTCTTCCCGGCCAAGCTGCTCGGTGCTCCTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS TCA 72 bp GGCACCCCCTCCTGTGGTGGCCACTCCTCGGCCCAGTaGGTAGTGGAGATTCAGGTGGGGAGCTCTAGTCAG +
Preference number: 6 (lower is better)
Translates to: GTPSCGGHSSAQ*VVEIQVGSSSQ
Trigger: CTGACTAGAGCTCCCCACCTGAATCTCCACTACTCACTGGGCCGAGGAGTGGCCACCACAGGAGGGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp TTCCATTCGGGCTGCCGGAGATGGGGTCTGCGGGCATaGGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: FHSGCRRWGLRA*EAGVASLVRSH
Trigger: ATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp GATGGACGACTGAGGTCCGCAGCTCCAGCGAGGACGTaGAGGCCTAACGACCCCGAGGTCACTGAGTCAGTC +
Preference number: 6 (lower is better)
Translates to: DGRLRSAAPART*RPNDPEVTESV
Trigger: GACTGACTCAGTGACCTCGGGGTCGTTAGGCCTCCACGTCCTCGCTGGAGCTGCGGACCTCAGTCGTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259708.7
ENST00000472792.1
ENST00000479388.5
CDS GCA 72 bp ATGATGCAGGAAAGAATGGGAGGTCTGCTGAACGGCTaGCGGGTCGCAAGGAACCGCGGCGCTGGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: MMQERMGGLLNG*RVARNRGAGVG
Trigger: ACCCACTCCAGCGCCGCGGTTCCTTGCGACCCGGCAGCCGTTCAGCAGACCTCCCATTCTTTCCTGCATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259708.7
ENST00000394056.6
ENST00000460283.1
ENST00000472792.1
ENST00000479388.5
ENST00000481499.5
CDS GCA 72 bp GCAATCTGCCGGTGTGGCTGCCGCTCTTGCCGGTACTaGCCCTTTAAATCCATGATGGCTGCCGCTCGAGGC +
Preference number: 6 (lower is better)
Translates to: AICRCGCRSCRY*PFKSMMAAARG
Trigger: GCCTCGAGCGGCAGCCATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp GCCCGGTCTGCAATCTGCCGGTGTGGCTGCCGCTCTTaGCGGTACTGCCCCTTTAAATCCATGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ARSAICRCGCRS*RYCPFKSMMAA
Trigger: GGCAGCCATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp GGGGACCTTGCCCGGTCTGCAATCTGCCGGTGTGGCTaGCGCTCTTGCCGGTACTGCCCCTTTAAATCCATG +
Preference number: 6 (lower is better)
Translates to: GDLARSAICRCG*RSCRYCPFKSM
Trigger: CATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGCCACACCGGCAGATTGCAGACCGGGCAAGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp AGATCCAGGGCAGCCGGATCGGTGGAGCCCAGGAAATaGAGAGGCTGGCACAGCTGCAGCAATGCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: RSRAAGSVEPRK*RGWHSCSNACK
Trigger: CTTGCAGGCATTGCTGCAGCTGTGCCAGCCTCTCCATTTCCTGGGCTCCACCGATCCGGCTGCCCTGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp TGCATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGGTaGCCACTCCTCGGCCCAGTGAGTAGTGGAGATTCA +
Preference number: 6 (lower is better)
Translates to: CMSSPVRHPLLW*PLLGPVSSGDS
Trigger: TGAATCTCCACTACTCACTGGGCCGAGGAGTGGCCACCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp TGGGGGACCTTGCCCGGTCGTAGGGTGCCTCCACAATaGCCGATGATGCAGGAAAGAATGGGAGGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: WGTLPGRRVPPQ*PMMQERMGGLL
Trigger: CAGCAGACCTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCTACGACCGGGCAAGGTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460283.1
CDS CCA 72 bp GTGGGGTGGGGAGGGCAAGGAATACTGACAGCAGGATaGTCAGGTCCCAAGGTGCTCTCCCGGATGCTAAGG +
Preference number: 6 (lower is better)
Translates to: VGWGGQGILTAG*SGPKVLSRMLR
Trigger: CCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTGCTGTCAGTATTCCTTGCCCTCCCCACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458460.6
CDS CAA 72 bp CCCAACACCAGGCCTGACATCCTGGCCTGGGGGACCTaGCCCGGTCTAGGGAGAAACAACAGAGTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PNTRPDILAWGT*PGLGRNNRVQL
Trigger: CAGCTGAACTCTGTTGTTTCTCCCTAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481888.1
CDS CCA 72 bp GCTTCTGTTTCTCCGACTCCACTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCTAGGTGGGCACATCCC +
Preference number: 6 (lower is better)
Translates to: ASVSPTPLCSGG*LEPASPRWAHP
Trigger: GGGATGTGCCCACCTAGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGAAACAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467906.5
ENST00000472172.1
CDS CAA 72 bp CTCTTCCTCCTGAGTGGCCTTAAGGCTGTGGGCCTCTaGAGCACTGCCACACTGGGGCACCCATTCTACCCA +
Preference number: 6 (lower is better)
Translates to: LFLLSGLKAVGL*STATLGHPFYP
Trigger: TGGGTAGAATGGGTGCCCCAGTGTGGCAGTGCTCAAGAGGCCCACAGCCTTAAGGCCACTCAGGAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS CAA 90 bp AGGCCTCCTCTCTTCCTCCTGAGTGGCCTTAAGGCTGTGGGCCTCTaGAGCACTGCCACACTGGGGCACCCATTCTACCCAAACTCTCTC +
Preference number: 6 (lower is better)
Translates to: RPPLFLLSGLKAVGL*STATLGHPFYPNSL
Trigger: GAGAGAGTTTGGGTAGAATGGGTGCCCCAGTGTGGCAGTGCTCAAGAGGCCCACAGCCTTAAGGCCACTCAGGAGGAAGAGAGGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS CAA 90 bp TATCCAGCTTGGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTATaGCGGAGCGACGGCGCCGGACAGTCAACGTCATCTAGGAGCACC +
Preference number: 6 (lower is better)
Translates to: YPAWAPVFCPPPFTL*RSDGAGQSTSSRST
Trigger: GGTGCTCCTAGATGACGTTGACTGTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCAAGCTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp GCAGGTTTCAGTAATAACGTTTCGAGTGCCTGCTGGTaGATGTCGAGCCCTGTGAGGCACCCCCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: AGFSNNVSSACW*MSSPVRHPLLW
Trigger: CCACAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp ATGCGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCATaGAGGTCCGTGACCTTGGATAAGGCACACTTAGCC +
Preference number: 6 (lower is better)
Translates to: MRGGSCESGQES*RSVTLDKAHLA
Trigger: GGCTAAGTGTGCCTTATCCAAGGTCACGGACCTGCATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp GGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTATTaGGGAGCGACGGCGCCGGACAGTCAACGTCATCTA +
Preference number: 6 (lower is better)
Translates to: GLQFSARLLLRY*GATAPDSQRHL
Trigger: TAGATGACGTTGACTGTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp CAGAGAGTCAGAGGATCTGCCAGCAAGAGGCGTGTCTaGGAAAGGGGAGGGAGGAACACCTGGTCACTCCAA +
Preference number: 6 (lower is better)
Translates to: QRVRGSASKRRV*ERGGRNTWSLQ
Trigger: TTGGAGTGACCAGGTGTTCCTCCCTCCCCTTTCCCAGACACGCCTCTTGCTGGCAGATCCTCTGACTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS CCA 72 bp TTCCATGTATACCTGGAGGGCCGAGGCTCAGTCCCCTaGAGCTTCCTCACCAAGAGTTCACTGCTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: FHVYLEGRGSVP*SFLTKSSLLLR
Trigger: CCGCAGAAGCAGTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGGTATACATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463168.1
CDS CCA 72 bp AGCTCCAGATTCTGGGTGGGAGTATTCAGGAACAGGTaGAAGGGGAGCCTACTGGGACGTGGCAAGACTGGC +
Preference number: 6 (lower is better)
Translates to: SSRFWVGVFRNR*KGSLLGRGKTG
Trigger: GCCAGTCTTGCCACGTCCCAGTAGGCTCCCCTTCCACCTGTTCCTGAATACTCCCACCCAGAATCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS CCA 72 bp TCACCTAGGTGGGCACATCCCCTGAGCTCCAGATTCTaGGTGGGAGTATTCAGGAACAGGTGGAAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SPRWAHPLSSRF*VGVFRNRWKGS
Trigger: GCTCCCCTTCCACCTGTTCCTGAATACTCCCACCCAGAATCTGGAGCTCAGGGGATGTGCCCACCTAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS CCA 72 bp GCTTCTGTTTCTCCGACTCCACTGTGCTCAGGTGGCTaGCTAGAGCCAGCATCACCTGCAATCTGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: ASVSPTPLCSGG*LEPASPAICRC
Trigger: ACACCGGCAGATTGCAGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAGTGGAGTCGGAGAAACAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479632.5
CDS CAA 72 bp TGGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTATaGCGGAGCGACGGCGCCGGACAGTCAACGTCATCT +
Preference number: 6 (lower is better)
Translates to: WAPVFCPPPFTL*RSDGAGQSTSS
Trigger: AGATGACGTTGACTGTCCGGCGCCGTCGCTCCGCAATAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS TCA 72 bp GCTGCCGCTCTTGCCGGTACTGCCCCTTTAAATCCATaGTGGCTGCCGCTCGAGGCAATTGTTTTGACGGGT +
Preference number: 6 (lower is better)
Translates to: AAALAGTAPLNP*WLPLEAIVLTG
Trigger: ACCCGTCAAAACAATTGCCTCGAGCGGCAGCCATCATGGATTTAAAGGGGCAGTACCGGCAAGAGCGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS GCA 72 bp TGTGGCACTCAGGCCAGAGCACGGAAGAAACTGTTCTaGAGCCAGAGAGTCAGAGGATCTGCCAGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: CGTQARARKKLF*SQRVRGSASKR
Trigger: CCTCTTGCTGGCAGATCCTCTGACTCTCTGGCTGCAGAACAGTTTCTTCCGTGCTCTGGCCTGAGTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394056.6
CDS GCA 72 bp GGTTGTGCAGGTTTCAGTAATAACGTTTCGAGTGCCTaGTGGTGCATGTCGAGCCCTGTGAGGCACCCCCTC +
Preference number: 6 (lower is better)
Translates to: GCAGFSNNVSSA*WCMSSPVRHPL
Trigger: GAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGCACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp TGTGCAGGTTTCAGTAATAACGTTTCGAGTGCCTGCTaGTGCATGTCGAGCCCTGTGAGGCACCCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: CAGFSNNVSSAC*CMSSPVRHPLL
Trigger: CAGGAGGGGGTGCCTCACAGGGCTCGACATGCACCAGCAGGCACTCGAAACGTTATTACTGAAACCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp TTTCCTAGTCACGCGACATTAGAGCTGCCCGCGGATTaGCTCTCACGGCGTTCAGGTAGGAAAGGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: FPSHATLELPAD*LSRRSGRKGGV
Trigger: CACACCTCCTTTCCTACCTGAACGCCGTGAGAGCCAATCCGCGGGCAGCTCTAATGTCGCGTGACTAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CCA 72 bp GGGGCACCCATTCTACCCAAACTCTCTCTCCATGGCTaGCCCGTTGACTTCCTCCCTGTTTCTCTCCGAGAT +
Preference number: 6 (lower is better)
Translates to: GAPILPKLSLHG*PVDFLPVSLRD
Trigger: ATCTCGGAGAGAAACAGGGAGGAAGTCAACGGGCCAGCCATGGAGAGAGAGTTTGGGTAGAATGGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS CAA 72 bp ACAGAAGGCAGAAACAGAAGCCACGACTGGAGCTCCTaGGCTACCCGGGGCCTTCCAAGCAGCATCATGAGA +
Preference number: 6 (lower is better)
Translates to: TEGRNRSHDWSS*ATRGLPSSIMR
Trigger: TCTCATGATGCTGCTTGGAAGGCCCCGGGTAGCCAAGGAGCTCCAGTCGTGGCTTCTGTTTCTGCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 90 bp TTGGTCTCTACAGAAGGCAGAAACAGAAGCCACGACTGGAGCTCCTaGGCTACCCGGGGCCTTCCAAGCAGCATCATGAGAAACCTGACG +
Preference number: 6 (lower is better)
Translates to: LVSTEGRNRSHDWSS*ATRGLPSSIMRNLT
Trigger: CGTCAGGTTTCTCATGATGCTGCTTGGAAGGCCCCGGGTAGCCAAGGAGCTCCAGTCGTGGCTTCTGTTTCTGCCTTCTGTAGAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 90 bp CTGGGGCACCCATTCTACCCAAACTCTCTCTCCATGGCTGGCCCGTaGACTTCCTCCCTGTTTCTCTCCGAGATACTTCTCCAGAGATCA +
Preference number: 6 (lower is better)
Translates to: LGHPFYPNSLSMAGP*TSSLFLSEILLQRS
Trigger: TGATCTCTGGAGAAGTATCTCGGAGAGAAACAGGGAGGAAGTCAACGGGCCAGCCATGGAGAGAGAGTTTGGGTAGAATGGGTGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS CCA 72 bp TGCCCGGTCTGGTCACTCCAAACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGTCACCTACAAACAGGC +
Preference number: 6 (lower is better)
Translates to: CPVWSLQTQSLP*FCLCHGHLQTG
Trigger: GCCTGTTTGTAGGTGACCGTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGACCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259708.7
CDS CCA 72 bp CGGCGTTCAGGTAGGAAAGGAGGTGTGTATCCAGCTTaGGCTCCAGTTTTCTGCCCGCCTCCTTTTACGTTA +
Preference number: 6 (lower is better)
Translates to: RRSGRKGGVYPA*APVFCPPPFTL
Trigger: TAACGTAAAAGGAGGCGGGCAGAAAACTGGAGCCCAAGCTGGATACACACCTCCTTTCCTACCTGAACGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 90 bp GGCGGGAGTTGCGAGTCTGGTCAGGAGTCATGCAGGTCCGTGACCTaGGATAAGGCACACTTAGCCTCAGCTTTTTCCTCTACAAGTGTT +
Preference number: 6 (lower is better)
Translates to: GGSCESGQESCRSVT*DKAHLASAFSSTSV
Trigger: AACACTTGTAGAGGAAAAAGCTGAGGCTAAGTGTGCCTTATCCAAGGTCACGGACCTGCATGACTCCTGACCAGACTCGCAACTCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 72 bp TGCGAGTCTGGTCAGGAGTCATGCAGGTCCGTGACCTaGGATAAGGCACACTTAGCCTCAGCTTTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: CESGQESCRSVT*DKAHLASAFSS
Trigger: AGAGGAAAAAGCTGAGGCTAAGTGTGCCTTATCCAAGGTCACGGACCTGCATGACTCCTGACCAGACTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 72 bp CCATTCTACCCAAACTCTCTCTCCATGGCTGGCCCGTaGACTTCCTCCCTGTTTCTCTCCGAGATACTTCTC +
Preference number: 6 (lower is better)
Translates to: PFYPNSLSMAGP*TSSLFLSEILL
Trigger: GAGAAGTATCTCGGAGAGAAACAGGGAGGAAGTCAACGGGCCAGCCATGGAGAGAGAGTTTGGGTAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486439.1
CDS CCA 72 bp AGGAACACCTGGTCACTCCAAACCCAGTCACTTCCATaGTTTTGTCTCTGTCACGGTCACCTACAAACAGGC +
Preference number: 6 (lower is better)
Translates to: RNTWSLQTQSLP*FCLCHGHLQTG
Trigger: GCCTGTTTGTAGGTGACCGTGACAGAGACAAAACCATGGAAGTGACTGGGTTTGGAGTGACCAGGTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394056.6
ENST00000481499.5
CDS TCA 72 bp CTACCTAGTAGCCTTCTCAGTGACCCCTCTAAGCCATaGAATCACAGACAGATGGGACCTAGGAGAAGACTG +
Preference number: 6 (lower is better)
Translates to: LPSSLLSDPSKP*NHRQMGPRRRL
Trigger: CAGTCTTCTCCTAGGTCCCATCTGTCTGTGATTTCATGGCTTAGAGGGGTCACTGAGAAGGCTACTAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468114.1
CDS CCA 72 bp TCAGTGACCCCTCTAAGCCATGAAATCACAGACAGATaGGACCTAGGAGAAGACTGTTGTTCCTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SVTPLSHEITDR*DLGEDCCSCLC
Trigger: GCAGAGACAGGAACAACAGTCTTCTCCTAGGTCCCATCTGTCTGTGATTTCATGGCTTAGAGGGGTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468114.1
CDS CAA 72 bp CAGCAATGCCTGCAAGCTGTCCTGATTTTCTCCGGCTaGGAGATAGCCACCACTTTTGAGCATTATTACCAG +
Preference number: 6 (lower is better)
Translates to: QQCLQAVLIFSG*EIATTFEHYYQ
Trigger: CTGGTAATAATGCTCAAAAGTGGTGGCTATCTCCAAGCCGGAGAAAATCAGGACAGCTTGCAGGCATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS TCA 72 bp CAGAGTTCAGCTGGTGTAAAGATGAGACAGAGAAGCTaGGCAACTTTCTCAGAGAGTGGTGGGAATCCAAGT +
Preference number: 6 (lower is better)
Translates to: QSSAGVKMRQRS*ATFSESGGNPS
Trigger: ACTTGGATTCCCACCACTCTCTGAGAAAGTTGCTCAGCTTCTCTGTCTCATCTTTACACCAGCTGAACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481888.1
CDS CCA 72 bp GAATCCAATTTCCCACTACCTCCACTGCTGTCACCCTaGACCAAGCCACTATCAATTCCTACCCAAATTATT +
Preference number: 6 (lower is better)
Translates to: ESNFPLPPLLSP*TKPLSIPTQII
Trigger: AATAATTTGGGTAGGAATTGATAGTGGCTTGGTCCAGGGTGACAGCAGTGGAGGTAGTGGGAAATTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS GCA 72 bp GGCACACTTAGCCTCAGCTTTTTCCTCTACAAGTGTTaGTTTCTCATAGGGCGAAATTCTTCAGACGAGATA +
Preference number: 6 (lower is better)
Translates to: GTLSLSFFLYKC*FLIGRNSSDEI
Trigger: TATCTCGTCTGAAGAATTTCGCCCTATGAGAAAGCAACACTTGTAGAGGAAAAAGCTGAGGCTAAGTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467906.5
CDS CAA 72 bp ATTACAATAACTTCCTCACTGGCCTCGTTTCTGCCCTaGTTCCCCTATTGTCTATTTGTAACCCAACAACCT +
Preference number: 6 (lower is better)
Translates to: ITITSSLASFLP*FPYCLFVTQQP
Trigger: AGGTTGTTGGGTTACAAATAGACAATAGGGGAACAAGGGCAGAAACGAGGCCAGTGAGGAAGTTATTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472172.1
CDS GCA 72 bp AATTCTTCAGACGAGATACTTAAGGTGAAAGTGCTTTaGAGATCACCGGTTGTGCAGGTTTCAGTAATAACG +
Preference number: 6 (lower is better)
Translates to: NSSDEILKVKVL*RSPVVQVSVIT
Trigger: CGTTATTACTGAAACCTGCACAACCGGTGATCTGCAAAGCACTTTCACCTTAAGTATCTCGTCTGAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467906.5