RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000104892

Ensembl transcript IDs: ENST00000391946.7, ENST00000470402.1, ENST00000494686.1, ENST00000585434.5, ENST00000589373.5, ENST00000589837.5, ENST00000590063.1

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCCTGGGTGCTGGCGCTaGGGGTCCGAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRPGCWR*GSEGPC
Trigger: ACAAGGCCCCTCGGACCCTCAGCGCCAGCACCCAGG...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGCCAGCCAGGCCATGGTaGTCTGCCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQPARPW*SARSAS
Trigger: GGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGG...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCAGCCAGGCCATGGTaGTCTGCCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPAPARPW*SARSAS
Trigger: GGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGG...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGAGGGCCTCCGCCAGGTaGCCAGCCAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRRASAR*PARPWC
Trigger: GCACCATGGCCTGGCTGGGCACCTGGCGGAGGCCCT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCATTCCGGCTGCTCCTaGCGCCGCCTCGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRHSGCS*RRLASE
Trigger: CTCCGAGGCGAGGCGGCGGCAGGAGCAGCCGGAATG...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCTGCCCAGCCAGGCCATaGTGCTCTGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRCPARP*CSARSA
Trigger: GGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCA...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCCACGGACTCCTCGCTaGCCCGAAGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAPRTPR*PEAAAA
Trigger: CGCAGCGGCGGCTTCGGGCCAGCGAGGAGTCCGTGG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCGTGGCCACGTCAGGGTaGCAGTGGCCCGAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRVATSG*QWPELR
Trigger: GCGCAGCTCGGGCCACTGCCACCCTGACGTGGCCAC...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGAGCCCCTGGACCACTTaGCGCGTCTGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRSPWTT*RVCRTS
Trigger: GCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCCAGGCCATGGTGCTCTaGCCGCAGCGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFQAMVL*PQRLQP
Trigger: GGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTG...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCATCTCCAAGCCGGCTaGCGGGCCCTGTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAHLQAG*RALSRQ
Trigger: CTGGCGGGACAGGGCCCGGCAGCCGGCTTGGAGATG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGGCCCGAAGCCGCCGCTaGGTCTCCTCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRARSRR*VSSSSS
Trigger: GGAGGAACTGGAGGAGACGCAGCGGCGGCTTCGGGC...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGGGCAGTGGCCCGAGCTaGGCTCCAGGTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRGSGPS*APGPPR
Trigger: CCTTGGAGGACCTGGAGCGCAGCTCGGGCCACTGCC...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCTGCCCAGCCAGGCCATaGTGCTCTGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFCPARP*CSARSA
Trigger: GGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCA...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAGCCACACGTTCTCCTaGGCCAGCCGCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFSHTFS*ASRRAC
Trigger: GCAGGCCCGGCGGCTGGCCCAGGAGAACGTGTGGCT...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGCCACGGACTCCTCGCTaGCCCGAAGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWPRTPR*PEAAAA
Trigger: CGCAGCGGCGGCTTCGGGCCAGCGAGGAGTCCGTGG...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGCCACGGACTCCTCGCTaGCCCGAAGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLPRTPR*PEAAAA
Trigger: CGCAGCGGCGGCTTCGGGCCAGCGAGGAGTCCGTGG...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCGCCACGTTGGGGTCATaGGGCCCGCCCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRATLGS*GPPSAS
Trigger: TGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGC...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGGCGGGGACTCAGACTaGCTCTCCGCCGGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAGGDSD*LSAGGS
Trigger: CGACCCACCGGCGGAGAGCCAGTCTGAGTCCCCGCC...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585434.5
CDS-3UTR TCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGGACAGCCAAGTTGTTaGGCGTGGCGGCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAGQPSC*AWRPPR
Trigger: CCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCC...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCTGGGTGCTGGCGCTaGGGGTCCGAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPGCWR*GSEGPC
Trigger: ACAAGGCCCCTCGGACCCTCAGCGCCAGCACCCAGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGACCACTTGCCGCGTCTaGCGCACCAGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRTTCRV*RTSSSG
Trigger: CCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAGCCCCTGGACCACTTaGCGCGTCTGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFSPWTT*RVCRTS
Trigger: GCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCT...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCAGGCCATGGTGCTCTaGCCGCAGCGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLQAMVL*PQRLQP
Trigger: GGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTG...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCCAGCCAGGCCATGGTaGTCTGCCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLPARPW*SARSAS
Trigger: GGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGG...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGAGGGCCTCCGCCAGGTaGCCAGCCAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLRASAR*PARPWC
Trigger: GCACCATGGCCTGGCTGGGCACCTGGCGGAGGCCCT...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGTCAGGGCCCAGCGTCTaGTCCCGGATCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPASGPSV*SRICRA
Trigger: TGCCCTGCAGATCCGGGAGCAGACGCTGGGCCCTGA...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCATTCCGGCTGCTCCTaGCGCCGCCTCGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDHSGCS*RRLASE
Trigger: CTCCGAGGCGAGGCGGCGGCAGGAGCAGCCGGAATG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGTCTCTTCATTCCGGCTaGTCCTGCCGCCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPASLHSG*SCRRLA
Trigger: GGCGAGGCGGCGGCAGGAGCAGCCGGAATGAAGAGA...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAAGGGCTCAGGCGCTCTaGGCCCAGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPRAQAL*AQPCTS
Trigger: GGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCT...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAAGCGCCTCCAGCCCCTaGACCACTTGCCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPSASSP*TTCRVC
Trigger: GCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCT...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCCCCAGCTCGATaGCCTCCAGCGAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRPAPAR*PPASGS
Trigger: TGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGG...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGACGTCAGGGTGGCAGTaGCCCGAGCTGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAATSGWQ*PELRSR
Trigger: CCTGGAGCGCAGCTCGGGCCACTGCCACCCTGACGT...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGGTGGCCACGTCAGGGTaGCAGTGGCCCGAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLVATSG*QWPELR
Trigger: GCGCAGCTCGGGCCACTGCCACCCTGACGTGGCCAC...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCCACGTTGGGGTCATaGGGCCCGCCCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPATLGS*GPPSAS
Trigger: TGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGC...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACGGACAGCCAAGTTGTTaGGCGTGGCGGCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDGQPSC*AWRPPR
Trigger: CCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCC...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGGACAGCCAAGTTGTTaGGCGTGGCGGCCACCGCGG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLGQPSC*AWRPPR
Trigger: CCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCC...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGACGGATCTTGGAGAGTaGGCTGCTGCGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQTDLGE*AAAAKG
Trigger: GCCCTTCGCCGCAGCAGCTCACTCTCCAAGATCCGT...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGACGGATCTTGGAGAGTaGGCTGCTGCGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRTDLGE*AAAAKG
Trigger: GCCCTTCGCCGCAGCAGCTCACTCTCCAAGATCCGT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCCGCTTCGCCCCACTaGGATCAGTCGCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPASPH*DQSRPA
Trigger: TGCGGGACGCGACTGATCGCAGTGGGGCGAAGCGGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAAGCCCCTGGACCACTTaGCGCGTCTGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSSPWTT*RVCRTS
Trigger: GCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCT...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACGCCCGAAGCCGCCGCTaGGTCTCCTCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDARSRR*VSSSSS
Trigger: GGAGGAACTGGAGGAGACGCAGCGGCGGCTTCGGGC...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAGCCCGAAGCCGCCGCTaGGTCTCCTCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSARSRR*VSSSSS
Trigger: GGAGGAACTGGAGGAGACGCAGCGGCGGCTTCGGGC...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCCTGCTGAGCAGCTaGTGCTCCTGCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFTLLSS*CSCGLR
Trigger: CCTGAGGCCGCAGGAGCAGCAGCTGCTCAGCAGGGT...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAGGCAGTGGCCCGAGCTaGGCTCCAGGTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSGSGPS*APGPPR
Trigger: CCTTGGAGGACCTGGAGCGCAGCTCGGGCCACTGCC...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCATCAGGGCCCAGCGTCTaGTCCCGGATCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPSGPSV*SRICRA
Trigger: TGCCCTGCAGATCCGGGAGCAGACGCTGGGCCCTGA...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGCTGGCACAGGGGCTCTaGCTCCCGGTAACGCCCACG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLLAQGL*LPVTPT
Trigger: CGTGGGCGTTACCGGGAGGCAGAGCCCCTGTGCCAG...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGATGGGGCCCGCCCAGTaGCTCATAGATGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRMGPAQ*LIDAQG
Trigger: GCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCAT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGAGGGCTCAGGCGCTCTaGGCCCAGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLRAQAL*AQPCTS
Trigger: GGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCT...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCCCAGCCCCAGCTCGATaGCCTCCAGCGAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFPAPAR*PPASGS
Trigger: TGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGG...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCTGGCTCTCCGCCGGTaGGTCGTACTGTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAALALRR*VVLSQL
Trigger: CAGCTGCGACAGTACGACCCACCGGCGGAGAGCCAG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACGGGGACTCAGACTGCTaGCTCTCCGCCGGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDGDSDC*LSAGGS
Trigger: CGACCCACCGGCGGAGAGCCAGCAGTCTGAGTCCCC...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR CCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGGGGGACTCAGACTGCTaGCTCTCCGCCGGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLGDSDC*LSAGGS
Trigger: CGACCCACCGGCGGAGAGCCAGCAGTCTGAGTCCCC...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCATCTCCTCCTCCTCGCTaGGGAACAGGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPSPPPR*GTGRPG
Trigger: GCCTGGCCTCCCTGTTCCCCAGCGAGGAGGAGGAGA...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGAGGTCCTCCAAGGCCTaGCGGCACAGAGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWRSSKA*RHRGTA
Trigger: GGCGGTGCCTCTGTGCCGCCAGGCCTTGGAGGACCT...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGACGTCAGGGTGGCAGTaGCCCGAGCTGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLTSGWQ*PELRSR
Trigger: CCTGGAGCGCAGCTCGGGCCACTGCCACCCTGACGT...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGGCCACGTTGGGGTCATaGGGCCCGCCCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLATLGS*GPPSAS
Trigger: TGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGC...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGTGGGGGCTCAGGTCCTaGGTGCTGGCGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWWGLRS*VLALRV
Trigger: GACCCTCAGCGCCAGCACCCAGGACCTGAGCCCCCA...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAACCACTTGCCGCGTCTaGCGCACCAGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSTTCRV*RTSSSG
Trigger: CCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGT...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACACCACTTGCCGCGTCTaGCGCACCAGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDTTCRV*RTSSSG
Trigger: CCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGT...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCACAGTGCACCCACATGTaGCGACAGGGCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPQCTHM*RQGQQH
Trigger: GTGCTGCTGGCCCTGTCGGCACATGTGGGTGCACTG...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGTCAGGGCCCAGCGTCTaGTCCCGGATCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWSGPSV*SRICRA
Trigger: TGCCCTGCAGATCCGGGAGCAGACGCTGGGCCCTGA...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGATGGGGCCCGCCCAGTaGCTCATAGATGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAMGPAQ*LIDAQG
Trigger: GCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCAT...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAATGGGGCCCGCCCAGTaGCTCATAGATGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPMGPAQ*LIDAQG
Trigger: GCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCAT...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGGCGAAGGGCCTGTTCTaGGTCACCAGCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPAAKGLF*VTSCAC
Trigger: ACAGGCACAGCTGGTGACGCAGAACAGGCCCTTCGC...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGTGGAGAGTGAGCTGCTaGGGCGAAGGGCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPAWRVSC*GEGPVL
Trigger: CAGAACAGGCCCTTCGCCGCAGCAGCTCACTCTCCA...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGTCTCTTCATTCCGGCTaGTCCTGCCGCCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLSLHSG*SCRRLA
Trigger: GGCGAGGCGGCGGCAGGAGCAGCCGGAATGAAGAGA...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCCAGCCCCAGCTCGATaGCCTCCAGCGAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLPAPAR*PPASGS
Trigger: TGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGG...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCTGGCTCTCCGCCGGTaGGTCGTACTGTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDLALRR*VVLSQL
Trigger: CAGCTGCGACAGTACGACCCACCGGCGGAGAGCCAG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACTCTCCTCCTCCTCGCTaGGGAACAGGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDSPPPR*GTGRPG
Trigger: GCCTGGCCTCCCTGTTCCCCAGCGAGGAGGAGGAGA...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGTCTCCTCCTCCTCGCTaGGGAACAGGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLSPPPR*GTGRPG
Trigger: GCCTGGCCTCCCTGTTCCCCAGCGAGGAGGAGGAGA...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCCTGCCCCGCGTACTaGATCACGAGGTTATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRPCPAY*ITRLCR
Trigger: CCTGCATAACCTCGTGATCCAGTACGCGGGGCAGGG...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGGCCAGCGCAGTTCACTaGACGTTAGTGGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPAASAVH*TLVGAQ
Trigger: CTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGC...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCCGGGCCAGTCAGTTaGCCCCCAGCCTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPGPVS*PPASIP
Trigger: GGGAATAGAGGCTGGGGGCCAACTGACTGGCCCGGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS-3UTR TCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCTGCCAGCTGGGAAACTaGGTCCCAGGAGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFCQLGN*VPGALG
Trigger: TCCAAGGGCTCCTGGGACTCAGTTTCCCAGCTGGCA...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGTGCCAGCTGGGAAACTaGGTCCCAGGAGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAACQLGN*VPGALG
Trigger: TCCAAGGGCTCCTGGGACTCAGTTTCCCAGCTGGCA...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCAGGAGCCGCTACCTaGACAGACATTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPAPGAAT*TDIAAP
Trigger: AGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGG...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGGAGCCGCTACCTaGACAGACATTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRPGAAT*TDIAAP
Trigger: AGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGG...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCAGGCCATGGTGCTCTaGCCGCAGCGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRQAMVL*PQRLQP
Trigger: GGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACTGCGAGCGCAGCCGCTaGTTCTCTGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDCERSR*FSASSA
Trigger: TGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCA...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCATGCGAGCGCAGCCGCTaGTTCTCTGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSCERSR*FSASSA
Trigger: TGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCA...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCTGTTCCCAAGAAGCTaGGGCCAGCGCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRLFPRS*GQRSSL
Trigger: CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAG...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGATGGCCTCCAGCGAGTaGCTCACCACCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQMASSE*LTTCCF
Trigger: AAAGCAGCAGGTGGTGAGCCACTCGCTGGAGGCCAT...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGTGTCCAGGTGCCAGCTaGGAAACTGAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRCPGAS*ETESQE
Trigger: CTCCTGGGACTCAGTTTCCCAGCTGGCACCTGGACA...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTaGACGTTAGTGGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAASAVH*TLVGAQ
Trigger: CTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGC...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCCCGCTTCGCCCCACTaGGATCAGTCGCGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRPASPH*DQSRPA
Trigger: TGCGGGACGCGACTGATCGCAGTGGGGCGAAGCGGG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000585434.5
CDS-3UTR GCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCACCAGGAGCCGCTACCTaGACAGACATTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPPGAAT*TDIAAP
Trigger: AGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGG...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGGCCTCCGCCAGGTaGCCAGCCAGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQRASAR*PARPWC
Trigger: GCACCATGGCCTGGCTGGGCACCTGGCGGAGGCCCT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACATCTCCAAGCCGGCTaGCGGGCCCTGTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPHLQAG*RALSRQ
Trigger: CTGGCGGGACAGGGCCCGGCAGCCGGCTTGGAGATG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGCATCTCCAAGCCGGCTaGCGGGCCCTGTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQHLQAG*RALSRQ
Trigger: CTGGCGGGACAGGGCCCGGCAGCCGGCTTGGAGATG...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCTTCTCTGCCTCCAGTaGACCCACATGTGCCGACAG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAALLCLQ*THMCRQ
Trigger: CTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCCTTCTCTGCCTCCAGTaGACCCACATGTGCCGACAG +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFLLCLQ*THMCRQ
Trigger: CTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAG...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCGTCTGCTCCCGGATCTaGAGGGCATCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFVCSRI*RASWRR
Trigger: CCTTCTCCATGATGCCCTGCAGATCCGGGAGCAGAC...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGTCTGCTCCCGGATCTaGAGGGCATCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAVCSRI*RASWRR
Trigger: CCTTCTCCATGATGCCCTGCAGATCCGGGAGCAGAC...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCTGGCACAGGGGCTCTaGCTCCCGGTAACGCCCACG +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRLAQGL*LPVTPT
Trigger: CGTGGGCGTTACCGGGAGGCAGAGCCCCTGTGCCAG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGTCTTGGAGAGTGAGCTaGTGCGGCGAAGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAASWRVS*CGEGPV
Trigger: AACAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGA...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACATTCCGGCTGCTCCTaGCGCCGCCTCGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPHSGCS*RRLASE
Trigger: CTCCGAGGCGAGGCGGCGGCAGGAGCAGCCGGAATG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCTGTTCCCAAGAAGCTaGGGCCAGCGCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAALFPRS*GQRSSL
Trigger: CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGGTTTGGGGAATCATTaGCCGGGCCAGTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPGLGNH*PGQSVG
Trigger: GCCAACTGACTGGCCCGGGCAATGATTCCCCAAACC...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS-3UTR CCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGAGGGCTCAGGCGCTCTaGGCCCAGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRRAQAL*AQPCTS
Trigger: GGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCT...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGAGCGCCTCCAGCCCCTaGACCACTTGCCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRSASSP*TTCRVC
Trigger: GCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCT...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTGCCCAGCCAGGCCATaGTGCTCTGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQCPARP*CSARSA
Trigger: GGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCA...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGCCACACGTTCTCCTaGGCCAGCCGCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQSHTFS*ASRRAC
Trigger: GCAGGCCCGGCGGCTGGCCCAGGAGAACGTGTGGCT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAAGCCACACGTTCTCCTaGGCCAGCCGCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPSHTFS*ASRRAC
Trigger: GCAGGCCCGGCGGCTGGCCCAGGAGAACGTGTGGCT...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGCCCTGCCCCGCGTACTaGATCACGAGGTTATGCAGG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLPCPAY*ITRLCR
Trigger: CCTGCATAACCTCGTGATCCAGTACGCGGGGCAGGG...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCCTGCCCCGCGTACTaGATCACGAGGTTATGCAGG +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPCPAY*ITRLCR
Trigger: CCTGCATAACCTCGTGATCCAGTACGCGGGGCAGGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTCCCAGGAGCCCTTaGAGCATCCACGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRSPRSP*SIHVQC
Trigger: ACACTGAACGTGGATGCTCCAAGGGCTCCTGGGACT...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGAGTCCCAGGAGCCCTTaGAGCATCCACGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRSPRSP*SIHVQC
Trigger: ACACTGAACGTGGATGCTCCAAGGGCTCCTGGGACT...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGGCCAGCGCAGTTCACTaGACGTTAGTGGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWASAVH*TLVGAQ
Trigger: CTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGC...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGCTTCTCTGCCTCCAGTaGACCCACATGTGCCGACAG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLLLCLQ*THMCRQ
Trigger: CTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAG...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGACCCTGCTGAGCAGCTaGTGCTCCTGCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRTLLSS*CSCGLR
Trigger: CCTGAGGCCGCAGGAGCAGCAGCTGCTCAGCAGGGT...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGTGGATCACGAGGTTATaGAGGGTCCGAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWWITRL*RVRRRA
Trigger: TGCCCGCCTTCGGACCCTGCATAACCTCGTGATCCA...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACTGGATCACGAGGTTATaGAGGGTCCGAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDWITRL*RVRRRA
Trigger: TGCCCGCCTTCGGACCCTGCATAACCTCGTGATCCA...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCGGCAGTGGCCCGAGCTaGGCTCCAGGTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTGSGPS*APGPPR
Trigger: CCTTGGAGGACCTGGAGCGCAGCTCGGGCCACTGCC...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACTGGCACAGGGGCTCTaGCTCCCGGTAACGCCCACG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPLAQGL*LPVTPT
Trigger: CGTGGGCGTTACCGGGAGGCAGAGCCCCTGTGCCAG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCCAGTGCCTCATAGATaGTCAGGGCCCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDPVPHR*SGPGHS
Trigger: ACTATGCCCGGGCCCTGAGCATCTATGAGGCACTGG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGTCTTGGAGAGTGAGCTaGTGCGGCGAAGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLSWRVS*CGEGPV
Trigger: AACAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGA...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCTGTTCCCAAGAAGCTaGGGCCAGCGCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDLFPRS*GQRSSL
Trigger: CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCAGCCCATCCCTCCTaGACTGTTCCCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPAHPS*TVPKKL
Trigger: CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCCTGCACAGACATTGCTaGTCCTGGGGAGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFLHRHC*SWGAMV
Trigger: CACCATTGCTCCCCAGGAGCAGCAATGTCTGTGCAG...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS-3UTR CCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAATGGCCTCCAGCGAGTaGCTCACCACCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSMASSE*LTTCCF
Trigger: AAAGCAGCAGGTGGTGAGCCACTCGCTGGAGGCCAT...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGTCCTCCAAGGCCTaGCGGCACAGAGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQRSSKA*RHRGTA
Trigger: GGCGGTGCCTCTGTGCCGCCAGGCCTTGGAGGACCT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAAGGTCCTCCAAGGCCTaGCGGCACAGAGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPRSSKA*RHRGTA
Trigger: GGCGGTGCCTCTGTGCCGCCAGGCCTTGGAGGACCT...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCTCTTTGTACTTGTTCTaGTCCCGGTACACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRSLYLF*SRYTSA
Trigger: GGCGCTGGTGTACCGGGACCAGAACAAGTACAAAGA...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGTGTCCAGGTGCCAGCTaGGAAACTGAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLCPGAS*ETESQE
Trigger: CTCCTGGGACTCAGTTTCCCAGCTGGCACCTGGACA...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTGGGGGCTCAGGTCCTaGGTGCTGGCGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQWGLRS*VLALRV
Trigger: GACCCTCAGCGCCAGCACCCAGGACCTGAGCCCCCA...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAAGACATTGCTGCTCCTaGGGAGCAATGGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPRHCCS*GAMVRG
Trigger: ACCCCTCACCATTGCTCCCCAGGAGCAGCAATGTCT...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCAGTGCACCCACATGTaGCGACAGGGCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRQCTHM*RQGQQH
Trigger: GTGCTGCTGGCCCTGTCGGCACATGTGGGTGCACTG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGACCCTGCTGAGCAGCTaGTGCTCCTGCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQTLLSS*CSCGLR
Trigger: CCTGAGGCCGCAGGAGCAGCAGCTGCTCAGCAGGGT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTCTCTTCATTCCGGCTaGTCCTGCCGCCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQSLHSG*SCRRLA
Trigger: GGCGAGGCGGCGGCAGGAGCAGCCGGAATGAAGAGA...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCATCTTTGTACTTGTTCTaGTCCCGGTACACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PLTPPAHPSCTVPKKLRPSLYLF*SRYTSA
Trigger: GGCGCTGGTGTACCGGGACCAGAACAAGTACAAAGA...TGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGAGTCCCAGGAGCCCTTaGAGCATCCACGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLSPRSP*SIHVQC
Trigger: ACACTGAACGTGGATGCTCCAAGGGCTCCTGGGACT...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCTGTTTCAGGTAGGCTaGGGCCAGGTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLLFQVG*GQVVLG
Trigger: ACCAAGAACAACCTGGCCTCAGCCTACCTGAAACAG...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCTGTTTCAGGTAGGCTaGGGCCAGGTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDLFQVG*GQVVLG
Trigger: ACCAAGAACAACCTGGCCTCAGCCTACCTGAAACAG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGACGGATCTTGGAGAGTaGGCTGCTGCGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQTDLGE*AAAAKG
Trigger: GCCCTTCGCCGCAGCAGCTCACTCTCCAAGATCCGT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp ACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGCCACGTTCAGTGTGTTaGGTGACATGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TPSHPTSPSLLHCSQEAAPRSVC*VTWLSS
Trigger: TGAAGAGAGCCATGTCACTCAACACACTGAACGTGG...CGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACAGTGCACCCACATGTaGCGACAGGGCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPQCTHM*RQGQQH
Trigger: GTGCTGCTGGCCCTGTCGGCACATGTGGGTGCACTG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCTGCGAGCGCAGCCGCTaGTTCTCTGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTCERSR*FSASSA
Trigger: TGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCA...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR GCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGTACCTGCACAGACATTaGTGCTCCTGGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLYLHRH*CSWGAM
Trigger: CATTGCTCCCCAGGAGCAGCAATGTCTGTGCAGGTA...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS-3UTR TCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACCCACGTTCAGTGTGTTaGGTGACATGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDPRSVC*VTWLSS
Trigger: TGAAGAGAGCCATGTCACTCAACACACTGAACGTGG...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACCACGTTCAGTGTGTTaGGTGACATGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSPRSVC*VTWLSS
Trigger: TGAAGAGAGCCATGTCACTCAACACACTGAACGTGG...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCTGCCAGCTGGGAAACTaGGTCCCAGGAGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTCQLGN*VPGALG
Trigger: TCCAAGGGCTCCTGGGACTCAGTTTCCCAGCTGGCA...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGGTCTGCTCCCGGATCTaGAGGGCATCATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRVCSRI*RASWRR
Trigger: CCTTCTCCATGATGCCCTGCAGATCCGGGAGCAGAC...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCCAGTGCCTCATAGATaGTCAGGGCCCGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRPVPHR*SGPGHS
Trigger: ACTATGCCCGGGCCCTGAGCATCTATGAGGCACTGG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCGCGAAGGGCCTGTTCTaGGTCACCAGCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTAKGLF*VTSCAC
Trigger: ACAGGCACAGCTGGTGACGCAGAACAGGCCCTTCGC...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGCGAAGGGCCTGTTCTaGGTCACCAGCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPAKGLF*VTSCAC
Trigger: ACAGGCACAGCTGGTGACGCAGAACAGGCCCTTCGC...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCATGGAGAGTGAGCTGCTaGGGCGAAGGGCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPWRVSC*GEGPVL
Trigger: CAGAACAGGCCCTTCGCCGCAGCAGCTCACTCTCCA...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCTGGAGAGTGAGCTGCTaGGGCGAAGGGCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTWRVSC*GEGPVL
Trigger: CAGAACAGGCCCTTCGCCGCAGCAGCTCACTCTCCA...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR GCA 90 bp CGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGGCCAGCCCATCCCTCCTaGACTGTTCCCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RPQPLIAGEGSYPPGTQRPAHPS*TVPKKL
Trigger: CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGG...CCTCTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACATCTGCAGGGCATCATaGAGAAGGTCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDICRAS*RRSVAS
Trigger: AGAAGCCACAGACCTTCTCCATGATGCCCTGCAGAT...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGATCTGCAGGGCATCATaGAGAAGGTCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLICRAS*RRSVAS
Trigger: AGAAGCCACAGACCTTCTCCATGATGCCCTGCAGAT...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp AGACCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGGTTCAGTGTGTTGAGTaGCATGGCTCTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: RPPLTPPAHPSCTVPKKLVQCVE*HGSLHS
Trigger: GGAATGAAGAGAGCCATGTCACTCAACACACTGAAC...CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTGGATCACGAGGTTATaGAGGGTCCGAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQWITRL*RVRRRA
Trigger: TGCCCGCCTTCGGACCCTGCATAACCTCGTGATCCA...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTCTTGGAGAGTGAGCTaGTGCGGCGAAGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQSWRVS*CGEGPV
Trigger: AACAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGA...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR GCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACCAGCCCATCCCTCCTaGACTGTTCCCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPPAHPS*TVPKKL
Trigger: CAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCATGTCCAGGTGCCAGCTaGGAAACTGAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPCPGAS*ETESQE
Trigger: CTCCTGGGACTCAGTTTCCCAGCTGGCACCTGGACA...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCATCTTTGTACTTGTTCTaGTCCCGGTACACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPSLYLF*SRYTSA
Trigger: GGCGCTGGTGTACCGGGACCAGAACAAGTACAAAGA...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGTTCAGTGTGTTGAGTaGCATGGCTCTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPVQCVE*HGSLHS
Trigger: GGAATGAAGAGAGCCATGTCACTCAACACACTGAAC...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAAGCTCTTCCGCTTGTTaGTACTTGTTCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPSSSAC*YLFCFR
Trigger: CCTGAAACAGAACAAGTATCAACAAGCGGAAGAGCT...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR TCA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCAGCTCTTCCGCTTGTTaGTACTTGTTCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTSSSAC*YLFCFR
Trigger: CCTGAAACAGAACAAGTATCAACAAGCGGAAGAGCT...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR TCA 90 bp TCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGCTCTTCCGCTTGTTaGTACTTGTTCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRPQPLIAGEGSYPPGTQSSSAC*YLFCFR
Trigger: CCTGAAACAGAACAAGTATCAACAAGCGGAAGAGCT...CTGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 90 bp TCCAAGCCGGCTGCCGGGCCCTGTCCCGCCAGGGCCTCCGCCAGGTaGCCAGCCAGGCCATGGTGCTCTGCCCGCAGCGCCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SKPAAGPCPARASAR*PARPWCSARSASSP
Trigger: GGGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCACCTGGCGGAGGCCCTGGCGGGACAGGGCCCGGCAGCCGGCTTGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS GCA 90 bp TGCTCTGCCCGCAGCGCCTCCAGCCCCTGGACCACTTGCCGCGTCTaGCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGGGCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: CSARSASSPWTTCRV*RTSSSGLRRSGPSP
Trigger: AGGGCTGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS GCA 90 bp AGGCCATGGTGCTCTGCCCGCAGCGCCTCCAGCCCCTGGACCACTTaGCGCGTCTGCCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RPWCSARSASSPWTT*RVCRTSSSGLRRSG
Trigger: CCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS CCA 90 bp TGCCCAGCCAGGCCATGGTGCTCTGCCCGCAGCGCCTCCAGCCCCTaGACCACTTGCCGCGTCTGCCGCACCAGCTCCTCAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: CPARPWCSARSASSP*TTCRVCRTSSSGLR
Trigger: CCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTGGCTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS TCA 90 bp CCAAGGCCCTTGGATCCCCTGGCCCAGAGCTCCCGGTTGGCCGTGTaGCCTGGGACCAGAGGCACCCTCCTCTGCCGGCAGAGTGAGGCG +
Preference number: 5 (lower is better)
Translates to: PRPLDPLAQSSRLAV*PGTRGTLLCRQSEA
Trigger: CGCCTCACTCTGCCGGCAGAGGAGGGTGCCTCTGGTCCCAGGTCACACGGCCAACCGGGAGCTCTGGGCCAGGGGATCCAAGGGCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590063.1
CDS GCA 90 bp CCCAGCCCCAGCTCGATGGCCTCCAGCGAGTGGCTCACCACCTGCTaGTTTTCCTCCAGCATCTCCAAGCCGGCTGCCGGGCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PSPSSMASSEWLTTC*FSSSISKPAAGPCP
Trigger: GGGACAGGGCCCGGCAGCCGGCTTGGAGATGCTGGAGGAAAAGCAGCAGGTGGTGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000590063.1
CDS-3UTR CAA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGCAGCCCCTGGACCACTaGCCGCGTCTGCCGCACCAG +
Preference number: 5 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQQPLDH*PRLPHQ
Trigger: CTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTG...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 90 bp CTGCCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGGGCCCAGCCCTaGACTTCCAGGAGCCGCTACCTGCACAGACATTGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPHQLLRAQALWAQP*TSRSRYLHRHCCSW
Trigger: CCAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470402.1
ENST00000590063.1
CDS-3UTR CAA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGAGGGTCCGAGGGGCCTaGTCCAGGTGCCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQRVRGA*SRCQLG
Trigger: TCCCAGCTGGCACCTGGACAAGGCCCCTCGGACCCT...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGGGTCCGAGGGGCCTaGTCCAGGTGCCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRRVRGA*SRCQLG
Trigger: TCCCAGCTGGCACCTGGACAAGGCCCCTCGGACCCT...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGGCCCGGGCCAGTCAGTaGGCCCCCAGCCTCTATTCC +
Preference number: 5 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRARASQ*APSLYS
Trigger: GGAATAGAGGCTGGGGGCCAACTGACTGGCCCGGGC...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS GCA 90 bp CTGCCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGGGCCCAGCCCTaGACTTCCAGGAGCCGCTACCTGCACAGACATTGCTGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: LPHQLLRAQALWAQP*TSRSRYLHRHCCSC
Trigger: ACAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS-3UTR CAA 90 bp ACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGAGGACAGCCAAGTTGTaGAGCGTGGCGGCCACCGCG +
Preference number: 5 (lower is better)
Translates to: TPPAHPSCTVPKKLRPAQRTAKL*SVAATA
Trigger: CGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCCT...CTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGAGGGTCCGAGGGGCCTaGTCCAGGTGCCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLRVRGA*SRCQLG
Trigger: TCCCAGCTGGCACCTGGACAAGGCCCCTCGGACCCT...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 90 bp TCTTGGCCACGTTGGGGTCATGGGGCCCGCCCAGTGCCTCATAGATaGTCAGGGCCCGGGCATAGTGCCGCTCCACGTCCTCAAACTTGC +
Preference number: 5 (lower is better)
Translates to: SWPRWGHGARPVPHR*SGPGHSAAPRPQTC
Trigger: GCAAGTTTGAGGACGTGGAGCGGCACTATGCCCGGGCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
ENST00000589373.5
CDS CCA 90 bp TCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTaGACGTTAGTGGGGGCTCAGGTCCTGGGTGCTGGCGCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SLLHCSQEAAASAVH*TLVGAQVLGAGAEG
Trigger: ACCCTCAGCGCCAGCACCCAGGACCTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS CCA 90 bp GGACCAGAGGCACCCTCCTCTGCCGGCAGAGTGAGGCGGGGCGTGTaGAGGCGGCAGCCTCTGCGTGAGCTCATTCTTAGGGTGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GPEAPSSAGRVRRGV*RRQPLRELILRVFL
Trigger: CAAAAACACCCTAAGAATGAGCTCACGCAGAGGCTGCCGCCTCCACACGCCCCGCCTCACTCTGCCGGCAGAGGAGGGTGCCTCTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590063.1
CDS-3UTR CAA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACAGGACAGCCAAGTTGTaGAGCGTGGCGGCCACCGCG +
Preference number: 5 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDRTAKL*SVAATA
Trigger: CGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCCT...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCGCAATGGTGAGGGGTTaGGGGAATCATTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRAMVRG*GNHCPG
Trigger: GCCCGGGCAATGATTCCCCAAACCCCTCACCATTGC...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS GCA 90 bp CTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTaGGGCCAGCGCAGTTCACTGGACGTTAGTGGGGGCTCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LSPHQPIPPALFPRS*GQRSSLDVSGGSGP
Trigger: AGGACCTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp AGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGGAGTCCCAGGAGCCCTaGGAGCATCCACGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SPSLLHCSQEAAASAVHWESQEP*EHPRSV
Trigger: CACTGAACGTGGATGCTCCAAGGGCTCCTGGGACTC...CCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 90 bp GCCCAGCCCTGCACTTCCAGGAGCCGCTACCTGCACAGACATTGCTaGTCCTGTAATCCCAGGGCTTCAGGAGGATTGCTGGAGCCTAGG +
Preference number: 5 (lower is better)
Translates to: AQPCTSRSRYLHRHC*SCNPRASGGLLEPR
Trigger: CCTAGGCTCCAGCAATCCTCCTGAAGCCCTGGGATTACAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS GCA 90 bp TGGGCCCAGCCCTGCACTTCCAGGAGCCGCTACCTGCACAGACATTaGTGCTCCTGTAATCCCAGGGCTTCAGGAGGATTGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: WAQPCTSRSRYLHRH*CSCNPRASGGLLEP
Trigger: AGGCTCCAGCAATCCTCCTGAAGCCCTGGGATTACAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS-3UTR CAA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCATAGACTCACGGATCTaGGAGAGTGAGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFIDSRI*ESELLR
Trigger: CCGCAGCAGCTCACTCTCCAAGATCCGTGAGTCTAT...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAGGTCTGTGGCTTCTTaGTACTTGTTCTGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFRSVAS*YLFWSR
Trigger: CCGGGACCAGAACAAGTACAAAGAAGCCACAGACCT...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACATAGACTCACGGATCTaGGAGAGTGAGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDIDSRI*ESELLR
Trigger: CCGCAGCAGCTCACTCTCCAAGATCCGTGAGTCTAT...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCTACCTGCACAGACATaGCTGCTCCTGACCGCGGGC +
Preference number: 5 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTLPAQT*LLLTAG
Trigger: GCCCGCGGTCAGGAGCAGCAATGTCTGTGCAGGTAG...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391946.7
CDS-3UTR CAA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACTACCTGCACAGACATaGCTGCTCCTGACCGCGGGC +
Preference number: 5 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPLPAQT*LLLTAG
Trigger: GCCCGCGGTCAGGAGCAGCAATGTCTGTGCAGGTAG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000585434.5
CDS-3UTR CAA 90 bp CACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCAAGGTCTGTGGCTTCTTaGTACTTGTTCTGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: HQPIPPALFPRSCGQRSSRSVAS*YLFWSR
Trigger: CCGGGACCAGAACAAGTACAAAGAAGCCACAGACCT...TGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCTCCACGTTCAGTGTGTaGAGTGACATGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PPAHPSCTVPKKLRPAQFSTFSV*SDMALF
Trigger: GAAGAGAGCCATGTCACTCAACACACTGAACGTGGA...GAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS TCA 90 bp GAGAGCTTCCTCTCCCCTCAGCCTGCACTCCACAAGGTTCCCATATaGAGCAGAACTTCCCATCTGAGCCCGGCCTGGATTGGCCAACTG +
Preference number: 5 (lower is better)
Translates to: ESFLSPQPALHKVPI*SRTSHLSPAWIGQL
Trigger: CAGTTGGCCAATCCAGGCCGGGCTCAGATGGGAAGTTCTGCTTCATATGGGAACCTTGTGGAGTGCAGGCTGAGGGGAGAGGAAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS-3UTR CAA 90 bp TCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCCAGCTCTTCCGCTTGTaGATACTTGTTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SPHQPIPPALFPRSCGQRQLFRL*ILVLFQ
Trigger: CTGAAACAGAACAAGTATCAACAAGCGGAAGAGCTG...GCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCCCCTCTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGTTGTGGAGGATTTCTTaGTACAGCTCTTCCGCTTGT +
Preference number: 5 (lower is better)
Translates to: PPLTPPAHPSCTVPKKLRLWRIS*YSSSAC
Trigger: ACAAGCGGAAGAGCTGTACAAAGAAATCCTCCACAA...CCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CTCACCCCACCAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGTTGTGGAGGATTTCTTaGTACAGCTCTTCCGCTTGT +
Preference number: 5 (lower is better)
Translates to: LTPPAHPSCTVPKKLRPALWRIS*YSSSAC
Trigger: ACAAGCGGAAGAGCTGTACAAAGAAATCCTCCACAA...CGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTGGTGGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCGAGTCCCAGGAGCCCTaGGAGCATCCACGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTESQEP*EHPRSV
Trigger: CACTGAACGTGGATGCTCCAAGGGCTCCTGGGACTC...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR CAA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAGAGTCCCAGGAGCCCTaGGAGCATCCACGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPESQEP*EHPRSV
Trigger: CACTGAACGTGGATGCTCCAAGGGCTCCTGGGACTC...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCGGGTTTGGGGAATCATaGCCCGGGCCAGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LSRPQPLIAGEGSYPPGTGFGES*PGPVSW
Trigger: CCAACTGACTGGCCCGGGCAATGATTCCCCAAACCC...GGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS TCA 90 bp AGCCTGCACTCCACAAGGTTCCCATATGAAGCAGAACTTCCCATCTaGGCCCGGCCTGGATTGGCCAACTGTCAGCCAACCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: SLHSTRFPYEAELPI*ARPGLANCQPTPHP
Trigger: TGGATGTGGGGTTGGCTGACAGTTGGCCAATCCAGGCCGGGCTCAGATGGGAAGTTCTGCTTCATATGGGAACCTTGTGGAGTGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS-3UTR CAA 90 bp CAGCCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGCAGCTCTTCCGCTTGTaGATACTTGTTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: QPIPPALFPRSCGQRSSLQLFRL*ILVLFQ
Trigger: CTGAAACAGAACAAGTATCAACAAGCGGAAGAGCTG...CAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp CCCATCCCTCCTGCACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTGGACTTGTGGAGGATTTCTTaGTACAGCTCTTCCGCTTGT +
Preference number: 5 (lower is better)
Translates to: PIPPALFPRSCGQRSSLDLWRIS*YSSSAC
Trigger: ACAAGCGGAAGAGCTGTACAAAGAAATCCTCCACAA...GTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTGCAGGAGGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCAATAGACTCACGGATCTaGGAGAGTGAGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPIDSRI*ESELLR
Trigger: CCGCAGCAGCTCACTCTCCAAGATCCGTGAGTCTAT...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS-3UTR CAA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCATCCACGTTCAGTGTGTaGAGTGACATGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPSTFSV*SDMALF
Trigger: GAAGAGAGCCATGTCACTCAACACACTGAACGTGGA...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS TCA 90 bp CCTGTAATCCCAGGGCTTCAGGAGGATTGCTGGAGCCTAGGAGTTTaGGACCAACTTGGGGAACATAGGATGAACCTATCTGTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PVIPGLQEDCWSLGV*DQLGEHRMNLSVED
Trigger: GTCCTCCACAGATAGGTTCATCCTATGTTCCCCAAGTTGGTCTCAAACTCCTAGGCTCCAGCAATCCTCCTGAAGCCCTGGGATTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS-3UTR CAA 90 bp ACTGTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACTCCACGTTCAGTGTGTaGAGTGACATGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TVTSTAFNRRRRQLSTRYSTFSV*SDMALF
Trigger: GAAGAGAGCCATGTCACTCAACACACTGAACGTGGA...GTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391946.7
ENST00000470402.1
CDS-3UTR CAA 90 bp GTCACGTCCACAGCCTTTAATCGCAGGAGAAGGCAGCTATCCACCAGGTACCCACAGCTCTTCCGCTTGTaGATACTTGTTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: VTSTAFNRRRRQLSTRYPQLFRL*ILVLFQ
Trigger: CTGAAACAGAACAAGTATCAACAAGCGGAAGAGCTG...TGGGTACCTGGTGGATAGCTGCCTTCTCCTGCGATTAAAGGCTGTGGACGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 72 bp CTGACCGCGGGCGGCTCCGGCCCCGCTTCGCCCCACTaGGATCAGTCGCGTCCCGCAGGCCAGGCACGCCCC +
Preference number: 6 (lower is better)
Translates to: LTAGGSGPASPH*DQSRPAGQARP
Trigger: GGGGCGTGCCTGGCCTGCGGGACGCGACTGATCGCAGTGGGGCGAAGCGGGGCCGGAGCCGCCCGCGGTCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000391946.7
ENST00000494686.1
ENST00000585434.5
ENST00000589837.5
CDS GCA 72 bp CGCAGCGCCTCCAGCCCCTGGACCACTTGCCGCGTCTaGCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RSASSPWTTCRV*RTSSSGLRRSG
Trigger: CCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS CAA 90 bp CAGGCCATGGTGCTCTGCCCGCAGCGCCTCCAGCCCCTGGACCACTaGCCGCGTCTGCCGCACCAGCTCCTCAGGGCTCAGGCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: QAMVLCPQRLQPLDH*PRLPHQLLRAQALW
Trigger: CCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGAGCACCATGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
ENST00000590063.1
CDS GCA 72 bp CAGCCGCTGCTTCTCTGCCTCCAGTGCACCCACATGTaGCGACAGGGCCAGCAGCACCTGGGCCTCGCCCAG +
Preference number: 6 (lower is better)
Translates to: QPLLLCLQCTHM*RQGQQHLGLAQ
Trigger: CTGGGCGAGGCCCAGGTGCTGCTGGCCCTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAGCAGCGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000590063.1
CDS GCA 72 bp GGCCTGCGAGCGCAGCCGCTGCTTCTCTGCCTCCAGTaGACCCACATGTGCCGACAGGGCCAGCAGCACCTG +
Preference number: 6 (lower is better)
Translates to: GLRAQPLLLCLQ*THMCRQGQQHL
Trigger: CAGGTGCTGCTGGCCCTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000590063.1
CDS GCA 72 bp CGTTGGGGTCATGGGGCCCGCCCAGTGCCTCATAGATaGTCAGGGCCCGGGCATAGTGCCGCTCCACGTCCT +
Preference number: 6 (lower is better)
Translates to: RWGHGARPVPHR*SGPGHSAAPRP
Trigger: AGGACGTGGAGCGGCACTATGCCCGGGCCCTGAGCATCTATGAGGCACTGGGCGGGCCCCATGACCCCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
ENST00000589373.5
CDS CCA 72 bp CAAGGCCCTTGGATCCCCTGGCCCAGAGCTCCCGGTTaGCCGTGTGACCTGGGACCAGAGGCACCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: QGPWIPWPRAPG*PCDLGPEAPSS
Trigger: AGAGGAGGGTGCCTCTGGTCCCAGGTCACACGGCCAACCGGGAGCTCTGGGCCAGGGGATCCAAGGGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590063.1
CDS TCA 72 bp AACGCCCACGCTTCCCATAGAGGACAGCCAAGTTGTTaGGCGTGGCGGCCACCGCGGGGTGCTCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: NAHASHRGQPSC*AWRPPRGAQGP
Trigger: TGGGCCCTGAGCACCCCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCCTCTATGGGAAGCGTGGGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
ENST00000589373.5
ENST00000589837.5
CDS GCA 72 bp AGCTCGATGGCCTCCAGCGAGTGGCTCACCACCTGCTaGTTTTCCTCCAGCATCTCCAAGCCGGCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: SSMASSEWLTTC*FSSSISKPAAG
Trigger: CCCGGCAGCCGGCTTGGAGATGCTGGAGGAAAAGCAGCAGGTGGTGAGCCACTCGCTGGAGGCCATCGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000494686.1
ENST00000585434.5
ENST00000589373.5
ENST00000590063.1
CDS CCA 72 bp CACTGTTCCCAAGAAGCTGCGGCCAGCGCAGTTCACTaGACGTTAGTGGGGGCTCAGGTCCTGGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: HCSQEAAASAVH*TLVGAQVLGAG
Trigger: GCCAGCACCCAGGACCTGAGCCCCCACTAACGTCCAGTGAACTGCGCTGGCCGCAGCTTCTTGGGAACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 72 bp CCCTGCACTTCCAGGAGCCGCTACCTGCACAGACATTaGTGCTCCTGGGGAGCAATGGTGAGGGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: PCTSRSRYLHRH*CSWGAMVRGLG
Trigger: CCCCAAACCCCTCACCATTGCTCCCCAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS CAA 72 bp GCCCTGCACTTCCAGGAGCCGCTACCTGCACAGACATaGCTGCTCCTGGGGAGCAATGGTGAGGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: ALHFQEPLPAQT*LLLGSNGEGFG
Trigger: CCCAAACCCCTCACCATTGCTCCCCAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470402.1
CDS CAA 90 bp CGGGAGACCAGCTTCTCACTTCCTCGCCTGATAGACTCACGGATCTaGGAGAGTGAGCTGCTGCGGCGAAGGGCCTGTTCTGCGTCACCA +
Preference number: 6 (lower is better)
Translates to: RETSFSLPRLIDSRI*ESELLRRRACSASP
Trigger: TGGTGACGCAGAACAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGATCCGTGAGTCTATCAGGCGAGGAAGTGAGAAGCTGGTCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS TCA 72 bp AGGAGCCCTTGGAGCATCCACGTTCAGTGTGTTGAGTaGCATGGCTCTCTTCATTCCGGCTGCTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RSPWSIHVQCVE*HGSLHSGCSCR
Trigger: GCGGCAGGAGCAGCCGGAATGAAGAGAGCCATGTCACTCAACACACTGAACGTGGATGCTCCAAGGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS TCA 72 bp GTGGCGCACACCTGTAGTTGCAGCTGCTTGGGAGATTaGGGTGGGATCCCCAGAGGTCAAGGTTGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: VAHTCSCSCLGD*GGIPRGQGCSE
Trigger: CTCACTGCAACCTTGACCTCTGGGGATCCCACCTCAATCTCCCAAGCAGCTGCAACTACAGGTGTGCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS GCA 72 bp CCCTGCACTTCCAGGAGCCGCTACCTGCACAGACATTaGTGCTCCTGTAATCCCAGGGCTTCAGGAGGATTG +
Preference number: 6 (lower is better)
Translates to: PCTSRSRYLHRH*CSCNPRASGGL
Trigger: CAATCCTCCTGAAGCCCTGGGATTACAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS TCA 72 bp TCCCAGGAGCCCTTGGAGCATCCACGTTCAGTGTGTTaGGTGACATGGCTCTCTTCATTCCGGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SQEPLEHPRSVC*VTWLSSFRLLL
Trigger: CAGGAGCAGCCGGAATGAAGAGAGCCATGTCACTCAACACACTGAACGTGGATGCTCCAAGGGCTCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5
CDS GCA 72 bp TGCACTTCCAGGAGCCGCTACCTGCACAGACATTGCTaGTCCTGTAATCCCAGGGCTTCAGGAGGATTGCTG +
Preference number: 6 (lower is better)
Translates to: CTSRSRYLHRHC*SCNPRASGGLL
Trigger: CAGCAATCCTCCTGAAGCCCTGGGATTACAGGAGCAGCAATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589373.5
CDS CAA 72 bp GTCCCAGGAGCCCTTGGAGCATCCACGTTCAGTGTGTaGAGTGACATGGCTCTCTTCATTCCGGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: VPGALGASTFSV*SDMALFIPAAP
Trigger: AGGAGCAGCCGGAATGAAGAGAGCCATGTCACTCAACACACTGAACGTGGATGCTCCAAGGGCTCCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391946.7
ENST00000470402.1
ENST00000585434.5