RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KITLG (Homo sapiens)

Ensembl gene IDs: ENSG00000049130

Ensembl transcript IDs: ENST00000347404.10, ENST00000357116.4, ENST00000552044.1, ENST00000644744.1, ENST00000646633.1

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTaGCAGACTGTTCTGATGTTCAGTGTTCTTAACTTCTTCCTGCGA +
Preference number: 1 (lower is better)
Translates to: GQGKRRTFPGCQCPS*QTVLMFSVLNFFLR
Trigger: TCGCAGGAAGAAGTTAAGAACACTGAACATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 90 bp GGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACTTCTTCCTGCGATGACTCTTTTGGA +
Preference number: 1 (lower is better)
Translates to: GGLSQDANVLLGRLF*CSVFLTSSCDDSFG
Trigger: TCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAACACTGAACATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR GCA 90 bp TATACACCCTATAGTGGTCAAGGGAAAAGGCGGACTTTCCCAGGATaGCAATGTCCTTCTTGGCAGACTGTTCTGATGTTCAGTGTTCTT +
Preference number: 1 (lower is better)
Translates to: YTPYSGQGKRRTFPG*QCPSWQTVLMFSVL
Trigger: AAGAACACTGAACATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTGACCACTATAGGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 90 bp ATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATTTGTA +
Preference number: 1 (lower is better)
Translates to: MTLLESPLCQGIIQY*LPCINGTRQPFAFV
Trigger: TACAAATGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 90 bp GACCCAAAGAAGAGAGGTGATTTACCATATCAGTTAATGACAGACTaGAGGCTCCGGATATCTTTTGCAACATCCATCCCACCATGCCAA +
Preference number: 1 (lower is better)
Translates to: DPKKRGDLPYQLMTD*RLRISFATSIPPCQ
Trigger: TTGGCATGGTGGGATGGATGTTGCAAAAGATATCCGGAGCCTCCAGTCTGTCATTAACTGATATGGTAAATCACCTCTCTTCTTTGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR TCA 90 bp CAGCATTTAGACATTTCTGGAGCCATGCAAATGGTACATGCAGTCTaGGACACGTGCTTTCTCTTCCAACATCAGCTGCAAGTTCTAAAT +
Preference number: 1 (lower is better)
Translates to: QHLDISGAMQMVHAV*DTCFLFQHQLQVLN
Trigger: ATTTAGAACTTGCAGCTGATGTTGGAAGAGAAAGCACGTGTCTCAGACTGCATGTACCATTTGCATGGCTCCAGAAATGTCTAAATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 90 bp TTTCCAGATCCCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACCAGGATAACTACAGGCTGCAGTTTG +
Preference number: 1 (lower is better)
Translates to: FPDPFEKNCYPHYPS*NLLAETRITTGCSL
Trigger: CAAACTGCAGCCTGTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGGGATCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 90 bp AAATGGAACCAGGCAACCATTTGCATTTGTATAGTGGGATATGGGTaGGCATGGTTTACATCAGGAAGAGATCGAAATCAGACCCATATC +
Preference number: 1 (lower is better)
Translates to: KWNQATICICIVGYG*AWFTSGRDRNQTHI
Trigger: GATATGGGTCTGATTTCGATCTCTTCCTGATGTAAACCATGCTCACCCATATCCCACTATACAAATGCAAATGGTTGCCTGGTTCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 90 bp ACACAACCTACACGCATAACTCATATTAATCTGTATCTATTTTCCTaGAAACAGTCAATGCCACACACTGAGACAGGACCTATCAGCAAT +
Preference number: 1 (lower is better)
Translates to: TQPTRITHINLYLFS*KQSMPHTETGPISN
Trigger: ATTGCTGATAGGTCCTGTCTCAGTGTGTGGCATTGACTGTTTTCAGGAAAATAGATACAGATTAATATGAGTTATGCGTGTAGGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 90 bp TCACGCACTCCACAAGGTCATCCACTATATTCACAAGTTTGTCTATaGTGGAATAATTACTCAAGCCTTCAGAAATATTTGAAAACTTGT +
Preference number: 1 (lower is better)
Translates to: SRTPQGHPLYSQVCL*WNNYSSLQKYLKTC
Trigger: ACAAGTTTTCAAATATTTCTGAAGGCTTGAGTAATTATTCCATCATAGACAAACTTGTGAATATAGTGGATGACCTTGTGGAGTGCGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR TCA 90 bp ATGTACGAAAGTAACAGTGTTGATACAAGCCACAATTACACTTCTTaGAACTCTCTCTCTTTCTCTTGCAACATACTTATCTCATTATCC +
Preference number: 1 (lower is better)
Translates to: MYESNSVDTSHNYTS*NSLSFSCNILISLS
Trigger: GGATAATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAGTTTCAAGAAGTGTAATTGTGGCTTGTATCAACACTGTTACTTTCGTACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGATGCTGGCAATGCCATaGCTGCCCAGTGTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMMLAMP*LPSVGW
Trigger: CCAGCCTACACTGGGCAGCCATGGCATTGCCAGCAT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGCTGCAAGTTCTAAATaGGACCCAAGTCCCGCAGTC +
Preference number: 2 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQAASSK*DPSPAV
Trigger: GACTGCGGGACTTGGGTCTCATTTAGAACTTGCAGC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACC +
Preference number: 2 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPPHYPS*NLLAET
Trigger: GGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 2 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGCAGTACTGGCTCCCTTaGATAAATGGAACCAGGCAA +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMQYWLP*INGTRQ
Trigger: TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTG...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACCTGGAGCCATGCAAATaGTACATGCAGTCTGAGACA +
Preference number: 2 (lower is better)
Translates to: FGLPITATAVIPKGAGCNLEPCK*YMQSET
Trigger: TGTCTCAGACTGCATGTACCATTTGCATGGCTCCAG...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGGCTCCCTTGCATAAATaGAACCAGGCAACCATTTGC +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMAPLHK*NQATIC
Trigger: GCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGC...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTTATCCAACAATGACTTaGCAAAACATCCATCCCGGG +
Preference number: 2 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVYPTMT*QNIHPG
Trigger: CCCGGGATGGATGTTTTGCCAAGTCATTGTTGGATA...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR TCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGATAGTGGGATATGGGTaGGCATGGTTTACATCAGGA +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMIVGYG*AWFTSG
Trigger: TCCTGATGTAAACCATGCTCACCCATATCCCACTAT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 2 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGTCCCGGGGACATATTTaGGGGTTATCATGTAGTCTT +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMSRGHI*GLSCSL
Trigger: AAGACTACATGATAACCCTCAAATATGTCCCCGGGA...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR GCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 2 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVNHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACAGTACTGGCTCCCTTaGATAAATGGAACCAGGCAA +
Preference number: 2 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQQYWLP*INGTRQ
Trigger: TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTG...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTACCCATATTAGCATGTaGGCGTGGTTTTCTAACCTT +
Preference number: 2 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVTHISM*AWFSNL
Trigger: AAGGTTAGAAAACCACGCCCACATGCTAATATGGGT...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CAA 90 bp TTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCAACCATTTGCATTTGTATAGTGGGA +
Preference number: 2 (lower is better)
Translates to: FGVSPLPRHNSVLAP*HKWNQATICICIVG
Trigger: TCCCACTATACAAATGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCAAGCTGAAATCTACTTaGAGAGACCAGGATAACTAC +
Preference number: 2 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPKLKST*RDQDNY
Trigger: GTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTT...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCATTAGCATGTGGGCGTaGTTTTCTAACCTTAGATAC +
Preference number: 2 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPISMWA*FSNLRY
Trigger: GTATCTAAGGTTAGAAAACCACGCCCACATGCTAAT...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 2 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQNHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGTGGTGGAAATTGAAATaGGACCATCTTACATTCAGC +
Preference number: 2 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMWWKLK*DHLTFS
Trigger: GCTGAATGTAAGATGGTCCCATTTCAATTTCCACCA...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTTTATGAAGCAAACATaGACTGTTACCAGCCAATGT +
Preference number: 2 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQFMKQT*TVTSQC
Trigger: ACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGCTGCAGTTTGTATCTaGAGAATAAAGCTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQAAVCI*RIKLGV
Trigger: AACACCTAGCTTTATTCTTCAGATACAAACTGCAGC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACC +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHPHYPS*NLLAET
Trigger: GGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGG...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATCGCTTATCCAACAATaGCTTGGCAAAACATCCATC +
Preference number: 2 (lower is better)
Translates to: GIIQYWLPCINGTRQPFASLIQQ*LGKTSI
Trigger: GATGGATGTTTTGCCAAGTCATTGTTGGATAAGCGA...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR GCA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACCTTAAAATAGAGTCCTaGTCCATGCAAGTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: FGLPITATAVIPKGAGCNLKIES*SMQVLL
Trigger: AAGAAGAACTTGCATGGAGCAGGACTCTATTTTAAG...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCTGCCCAGTGTAGGCTaGAGTCTCCAGGGGGATTTT +
Preference number: 2 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRLPSVG*SLQGDF
Trigger: AAAATCCCCCTGGAGACTCCAGCCTACACTGGGCAG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR TCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGAAACTTCTTCCTGCGATaGCTCTTTTGGAGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRNFFLR*LFWSLP
Trigger: GGGGAGACTCCAAAAGAGTCATCGCAGGAAGAAGTT...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGAAGCTGAAATCTACTTaGAGAGACCAGGATAACTAC +
Preference number: 2 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLKLKST*RDQDNY
Trigger: GTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CAA 90 bp GAAATCAGACCCATATCACTAATCGGCAACTATAAAGCTGACATGTaGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAG +
Preference number: 2 (lower is better)
Translates to: EIRPISLIGNYKADM*PNPITVPTAFYTVQ
Trigger: CTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACATGTCAGCTTTATAGTTGCCGATTAGTGATATGGGTCTGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACTCCCATGGTGGAAATTaGAATGGGACCATCTTACAT +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHSHGGN*NGTILH
Trigger: ATGTAAGATGGTCCCATTTCAATTTCCACCATGGGA...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACTTAAGACCATGTCCATaGGTGTTAAAACCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHLRPCP*VLKPSY
Trigger: GTAGCTGGGTTTTAACACTCATGGACATGGTCTTAA...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACACATTTCTGGAGCCATaGAAATGGTACATGCAGTCT +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHTFLEP*KWYMQS
Trigger: AGACTGCATGTACCATTTGCATGGCTCCAGAAATGT...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCAAGGATAACTACAGGCTaGAGTTTGTATCTGAAGAAT +
Preference number: 2 (lower is better)
Translates to: GIIQYWLPCINGTRQPFARITTG*SLYLKN
Trigger: ATTCTTCAGATACAAACTGCAGCCTGTAGTTATCCT...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHEQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp GTTACCAGCCAATGTACGAAAGTAACAGTGTTGATACAAGCCACAATTACACTTGCTCCCTTGCATAAATaGAACCAGGCAACCATTTGC +
Preference number: 2 (lower is better)
Translates to: VTSQCTKVTVLIQATITLAPLHK*NQATIC
Trigger: GCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGC...AAGTGTAATTGTGGCTTGTATCAACACTGTTACTTTCGTACATTGGCTGGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp GTTACCAGCCAATGTACGAAAGTAACAGTGTTGATACAAGCCACAATTACACTTCTCCAGGGGGATTTTTaGCCTTCCTATTACTGCTAC +
Preference number: 2 (lower is better)
Translates to: VTSQCTKVTVLIQATITLLQGDF*PSYYCY
Trigger: GTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAG...AAGTGTAATTGTGGCTTGTATCAACACTGTTACTTTCGTACATTGGCTGGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATAAGAGAAAACAATGCTaGCAATGCCATGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNKRKQC*QCHGCP
Trigger: TGGGCAGCCATGGCATTGCCAGCATTGTTTTCTCTT...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR TCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTGAAGATAAATGCAAGTaGGAATCCAAGTCCGGCTCG +
Preference number: 2 (lower is better)
Translates to: IISNLVFNTHISMWAWFSEDKCK*ESKSGS
Trigger: CGAGCCGGACTTGGATTCTCACTTGCATTTATCTTC...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACACATTTCTGGAGCCATaGAAATGGTACATGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYTFLEP*KWYMQS
Trigger: AGACTGCATGTACCATTTGCATGGCTCCAGAAATGT...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTCAGTACTGGCTCCCTTaGATAAATGGAACCAGGCAA +
Preference number: 2 (lower is better)
Translates to: IISNLVFNTHISMWAWFSQYWLP*INGTRQ
Trigger: TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTG...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACTTTTCCAGATCCCTTTaGGAAAAATTGTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHFSRSL*EKLLPS
Trigger: TGAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAA...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGACTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 2 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATTTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTTCTTAACTTCTTCCTaGGATGACTCTTTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYFLTSS*DDSFGV
Trigger: GACTCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGCTCCGGATATCTTTTaGAACATCCATCCCACCATG +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHAPDIF*NIHPTM
Trigger: CATGGTGGGATGGATGTTGCAAAAGATATCCGGAGC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR-3UTR CCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATCTGGAGCCATGCAAATaGTACATGCAGTCTGAGACA +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHLEPCK*YMQSET
Trigger: TGTCTCAGACTGCATGTACCATTTGCATGGCTCCAG...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTGGTGGAAATTGAAATaGGACCATCTTACATTCAGC +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYWWKLK*DHLTFS
Trigger: GCTGAATGTAAGATGGTCCCATTTCAATTTCCACCA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACATTAGCATGTGGGCGTaGTTTTCTAACCTTAGATAC +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYISMWA*FSNLRY
Trigger: GTATCTAAGGTTAGAAAACCACGCCCACATGCTAAT...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTTTTCCAGATCCCTTTaGGAAAAATTGTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYFSRSL*EKLLPS
Trigger: TGAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTTCCCATGGTGGAAATTaGAATGGGACCATCTTACAT +
Preference number: 2 (lower is better)
Translates to: IISNLVFNTHISMWAWFSSHGGN*NGTILH
Trigger: ATGTAAGATGGTCCCATTTCAATTTCCACCATGGGA...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 2 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRNHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTTCTTAACTTCTTCCTaGGATGACTCTTTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIFLTSS*DDSFGV
Trigger: GACTCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACAGTTGCATCTGGATTTaGTTTGAACAGAAGCTAAAA +
Preference number: 2 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHSCIWI*FEQKLK
Trigger: TTTTAGCTTCTGTTCAAAGCAAATCCAGATGCAACT...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACATCACTAGTTTCAGATaGCACTACAAAGTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYITSFR*HYKVLE
Trigger: TTCAAGGACTTTGTAGTGGCATCTGAAACTAGTGAT...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 2 (lower is better)
Translates to: ITHFANTIYTPYSGQGKREQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTTGTATAGTGGGATATaGGTGAGCATGGTTTACATC +
Preference number: 2 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHILYSGI*VSMVYI
Trigger: GATGTAAACCATGCTCACCCATATCCCACTATACAA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGACTTAAAATAGAGTCCTaGTCCATGCAAGTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRLKIES*SMQVLL
Trigger: AAGAAGAACTTGCATGGAGCAGGACTCTATTTTAAG...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGCCACTTACTGGAGTTaGATCTGGATTTGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHATYWS*IWICFE
Trigger: TTCAAAGCAAATCCAGATGCAACTCCAGTAAGTGGC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTTGTATATTTTCAACTaGCCTTGTAAGACTTGGCTG +
Preference number: 2 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHILYIFN*PCKTWL
Trigger: CAGCCAAGTCTTACAAGGGCAGTTGAAAATATACAA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGA +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHGIIQY*LPCING
Trigger: TCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGTTTATGAAGCAAACATaGACTGTTACCAGCCAATGT +
Preference number: 2 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRFMKQT*TVTSQC
Trigger: ACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAA...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTCTTAAAATAGAGTCCTaGTCCATGCAAGTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: IISNLVFNTHISMWAWFSLKIES*SMQVLL
Trigger: AAGAAGAACTTGCATGGAGCAGGACTCTATTTTAAG...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGAGGATAACTACAGGCTaGAGTTTGTATCTGAAGAAT +
Preference number: 2 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRRITTG*SLYLKN
Trigger: ATTCTTCAGATACAAACTGCAGCCTGTAGTTATCCT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATACATCCATCCCACCATaGCAAAATGCATTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHTSIPP*QNAFLK
Trigger: CTTCAAAAATGCATTTTGGCATGGTGGGATGGATGT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGTCTTTTGGAAGATTTaGCACCAATTTAGTGACGTC +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHVFWKI*HQFSDV
Trigger: GACGTCACTAAATTGGTGGCAAATCTTCCAAAAGAC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR TCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGTTTATGAAGCAAACATaGACTGTTACCAGCCAATGT +
Preference number: 2 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRFMKQT*TVTSQC
Trigger: ACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAA...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATCATCTGGATTTGCTTTaGACAGAAGCTAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHHLDLL*TEAKIQ
Trigger: TTGGATTTTAGCTTCTGTTCAAAGCAAATCCAGATG...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATAGGATAACTACAGGCTaGAGTTTGTATCTGAAGAAT +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHRITTG*SLYLKN
Trigger: ATTCTTCAGATACAAACTGCAGCCTGTAGTTATCCT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATAACCAGGCAACCATTTaGATTTGTATAGTGGGATAT +
Preference number: 2 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHNQATI*ICIVGY
Trigger: ATATCCCACTATACAAATGCAAATGGTTGCCTGGTT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCCTGCGATGACTCTTTaGGAGTCTCCCCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVPAMTL*ESPLCQ
Trigger: TTGGCAGAGGGGAGACTCCAAAAGAGTCATCGCAGG...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCA +
Preference number: 3 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPSVLAP*HKWNQA
Trigger: TGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGA...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCTGCGATGACTCTTTaGGAGTCTCCCCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQPAMTL*ESPLCQ
Trigger: TTGGCAGAGGGGAGACTCCAAAAGAGTCATCGCAGG...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR GCA 72 bp TATAGTGGTCAAGGGAAAAGGCGGACTTTCCCAGGATaGCAATGTCCTTCTTGGCAGACTGTTCTGATGTTC +
Preference number: 3 (lower is better)
Translates to: YSGQGKRRTFPG*QCPSWQTVLMF
Trigger: GAACATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTGACCACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 72 bp TTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGAACCAGGCAACCATTT +
Preference number: 3 (lower is better)
Translates to: LESPLCQGIIQY*LPCINGTRQPF
Trigger: AAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 3 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVEPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 3 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQEPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 72 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTaGCAGACTGTTCTGATGTTCAGTGTTCTTAACTTC +
Preference number: 3 (lower is better)
Translates to: KRRTFPGCQCPS*QTVLMFSVLNF
Trigger: GAAGTTAAGAACACTGAACATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAATTTTTCCAGATCCCTTaGAGAAAAATTGTTACCCTC +
Preference number: 3 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQFFQIP*RKIVTL
Trigger: GAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAAA...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp CCCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACCAGGATAACTACAGGC +
Preference number: 3 (lower is better)
Translates to: PFEKNCYPHYPS*NLLAETRITTG
Trigger: GCCTGTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp CAGGCAACCATTTGCATTTGTATAGTGGGATATGGGTaGGCATGGTTTACATCAGGAAGAGATCGAAATCAG +
Preference number: 3 (lower is better)
Translates to: QATICICIVGYG*AWFTSGRDRNQ
Trigger: CTGATTTCGATCTCTTCCTGATGTAAACCATGCTCACCCATATCCCACTATACAAATGCAAATGGTTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 72 bp GAACCAGGCAACCATTTGCATTTGTATAGTGGGATATaGGTGAGCATGGTTTACATCAGGAAGAGATCGAAA +
Preference number: 3 (lower is better)
Translates to: EPGNHLHLYSGI*VSMVYIRKRSK
Trigger: TTTCGATCTCTTCCTGATGTAAACCATGCTCACCCATATCCCACTATACAAATGCAAATGGTTGCCTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CCA 72 bp AAGAGAGGTGATTTACCATATCAGTTAATGACAGACTaGAGGCTCCGGATATCTTTTGCAACATCCATCCCA +
Preference number: 3 (lower is better)
Translates to: KRGDLPYQLMTD*RLRISFATSIP
Trigger: TGGGATGGATGTTGCAAAAGATATCCGGAGCCTCCAGTCTGTCATTAACTGATATGGTAAATCACCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR-3UTR CAA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACCTCCCATGGTGGAAATaGAAATGGGACCATCTTACA +
Preference number: 3 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYLPWWK*KWDHLT
Trigger: TGTAAGATGGTCCCATTTCAATTTCCACCATGGGAG...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR GCA 72 bp AAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTaGAGAGACCAGGATAACTACAGGCTGCAGTTTGTA +
Preference number: 3 (lower is better)
Translates to: KLLPSLSKLKST*RDQDNYRLQFV
Trigger: TACAAACTGCAGCCTGTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 3 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHTTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 3 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYEPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 3 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATAGCACAATGTCCATCTaGGGAATTCCTGCCAAATTC +
Preference number: 3 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNSTMSI*GIPAKF
Trigger: GAATTTGGCAGGAATTCCCAAGATGGACATTGTGCT...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 3 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp GTTACCAGCCAATGTACGAAAGTAACAGTGTTGATACAAGCCACAATTACACTTCAGATCCCTTCAGTTTaGACGAGAGGATTAAATAGG +
Preference number: 3 (lower is better)
Translates to: VTSQCTKVTVLIQATITLQIPSV*TRGLNR
Trigger: CCTATTTAATCCTCTCGTCAAAACTGAAGGGATCTG...AAGTGTAATTGTGGCTTGTATCAACACTGTTACTTTCGTACATTGGCTGGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CAA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTCTCAGGACTTAATGTaGAAGAAACCACACAATCAC +
Preference number: 3 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYSQDLM*KKPHNH
Trigger: GTGATTGTGTGGTTTCTTCAACATTAAGTCCTGAGA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CAA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACCTCTCTCTCTTTCTCTaGCAACATACTTATCTCATT +
Preference number: 3 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHLSLFL*QHTYLI
Trigger: AATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAG...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
3UTR-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 3 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHITTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 3 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR-3UTR CAA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATCTCCCATGGTGGAAATaGAAATGGGACCATCTTACA +
Preference number: 3 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHLPWWK*KWDHLT
Trigger: TGTAAGATGGTCCCATTTCAATTTCCACCATGGGAG...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp GCAGTTAGTTTTTCATGCCCTTTTGTGTCACTACATTaGAAACTGTCATCTTACGGTTGTAGAACATGGCAA +
Preference number: 3 (lower is better)
Translates to: AVSFSCPFVSLH*KLSSYGCRTWQ
Trigger: TTGCCATGTTCTACAACCGTAAGATGACAGTTTTCAATGTAGTGACACAAAAGGGCATGAAAAACTAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 3 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRTTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTTTTTCCAGATCCCTTaGAGAAAAATTGTTACCCTC +
Preference number: 3 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIFFQIP*RKIVTL
Trigger: GAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAAA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp GTATCTATTTTCCTGAAAACAGTCAATGCCACACACTaGGACAGGACCTATCAGCAATTTAAATTGATCTCT +
Preference number: 3 (lower is better)
Translates to: VSIFLKTVNATH*DRTYQQFKLIS
Trigger: AGAGATCAATTTAAATTGCTGATAGGTCCTGTCTCAGTGTGTGGCATTGACTGTTTTCAGGAAAATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR-3UTR CAA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGTTTTTCATGCCCTTTaGTGTCACTACATTGAAAAC +
Preference number: 3 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHVFHAL*CHYIEN
Trigger: GTTTTCAATGTAGTGACACAAAAGGGCATGAAAAAC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp ATTTCATGGTTTACTATCTCAGCAGTGAGTTTTCCATaGTTTATGAAGAAGGATATTCAGAACACATCTGGG +
Preference number: 3 (lower is better)
Translates to: ISWFTISAVSFP*FMKKDIQNTSG
Trigger: CCCAGATGTGTTCTGAATATCCTTCTTCATAAATCATGGAAAACTCACTGCTGAGATAGTAAACCATGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR TCA 72 bp CCACAAGGTCATCCACTATATTCACAAGTTTGTCTATaGTGGAATAATTACTCAAGCCTTCAGAAATATTTG +
Preference number: 3 (lower is better)
Translates to: PQGHPLYSQVCL*WNNYSSLQKYL
Trigger: CAAATATTTCTGAAGGCTTGAGTAATTATTCCATCATAGACAAACTTGTGAATATAGTGGATGACCTTGTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTGGGGGCCCCGGACCTaGACTGGCGGGAGACCGCGA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQWGPRT*TGGRPR
Trigger: TCGCGGTCTCCCGCCAGTGCAGGTCCGGGGCCCCCA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR GCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCCTGCACGCCCCAGCTaGAAGTCCCAGGGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVPARPS*KSQGAP
Trigger: CGGCGCTCCCTGGGACTTGCAGCTGGGGCGTGCAGG...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGTTTTCCTGGAGAGCCTaGGAGCTCCCGGGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLFSWRA*ELPGAP
Trigger: GGGCGCGCCCGGGAGCTCCCAGGCTCTCCAGGAAAA...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTCCCTCCCGGATCCGCTaGGGCTCACCTGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIPSRIR*GSPGTP
Trigger: GGGGGTGCCAGGTGAGCCCCAGCGGATCCGGGAGGG...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGACCTTGTCCGCTCGCCTaGGGGCCCCGGACCTGCACT +
Preference number: 4 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRPCPLA*GPRTCT
Trigger: AGTGCAGGTCCGGGGCCCCCAGGCGAGCGGACAAGG...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR GCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTCAGTTCCCGCCCGCCTaGTCCGGACACGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESQFPPA*SGHASF
Trigger: GAAGGAGGCGTGTCCGGAGCAGGCGGGCGGGAACTG...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGCCCCGGACCTGCACTaGCGGGAGACCGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSAPDLH*RETAKA
Trigger: CGCCTTCGCGGTCTCCCGCCAGTGCAGGTCCGGGGC...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGTCAATGCCACACACTaGGACAGGACCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQVNATH*DRTYQQ
Trigger: TTGCTGATAGGTCCTGTCTCAGTGTGTGGCATTGAC...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCGCTCCGGATATCTTTTaGAACATCCATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPAPDIF*NIHPTM
Trigger: CATGGTGGGATGGATGTTGCAAAAGATATCCGGAGC...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACCGGCAGGCACAGCCCTaGACGCCCCAGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNRQAQP*TPQLQV
Trigger: GACTTGCAGCTGGGGCGTGCAGGGCTGTGCCTGCCG...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCTGGAGCCATGCAAATaGTACATGCAGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPLEPCK*YMQSET
Trigger: TGTCTCAGACTGCATGTACCATTTGCATGGCTCCAG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTGCTCCCTTGCATAAATaGAACCAGGCAACCATTTGC +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVAPLHK*NQATIC
Trigger: GCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGC...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCGCAAAGGCCACTTACTaGAGTTGCATCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPAKATY*SCIWIC
Trigger: GCAAATCCAGATGCAACTCCAGTAAGTGGCCTTTGC...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCTCCAGGGGGATTTTTaGCCTTCCTATTACTGCTAC +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPLQGDF*PSYYCY
Trigger: GTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGCGAAGCCCGGCTGCTaGGCCGCCGGCGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRAKPGC*AAGAFI
Trigger: TATAAAAGCGCCGGCGGCTCAGCAGCCGGGCTTCGC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR TCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTCCCGGGGACATATTTaGGGGTTATCATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPSRGHI*GLSCSL
Trigger: AAGACTACATGATAACCCTCAAATATGTCCCCGGGA...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMPHYPS*NLLAET
Trigger: GGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGG...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAAACTTCTTCCTGCGATaGCTCTTTTGGAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQNFFLR*LFWSLP
Trigger: GGGGAGACTCCAAAAGAGTCATCGCAGGAAGAAGTT...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGTCAATGCCACACACTaGGACAGGACCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQVNATH*DRTYQQ
Trigger: TTGCTGATAGGTCCTGTCTCAGTGTGTGGCATTGAC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGCTGGAGCCATGCAAATaGTACATGCAGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQLEPCK*YMQSET
Trigger: TGTCTCAGACTGCATGTACCATTTGCATGGCTCCAG...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGGCAAAGGCCACTTACTaGAGTTGCATCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMAKATY*SCIWIC
Trigger: GCAAATCCAGATGCAACTCCAGTAAGTGGCCTTTGC...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGCTCCAGGGGGATTTTTaGCCTTCCTATTACTGCTAC +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQLQGDF*PSYYCY
Trigger: GTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAG...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGAGGGCGCGATTTTTCCTaGAGAGCCTGGGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRGRDFS*RAWELP
Trigger: CGGGAGCTCCCAGGCTCTCCAGGAAAAATCGCGCCC...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGATAGTGGGATATGGGTaGGCATGGTTTACATCAGGA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQIVGYG*AWFTSG
Trigger: TCCTGATGTAAACCATGCTCACCCATATCCCACTAT...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGAACTTCTTCCTGCGATaGCTCTTTTGGAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLNFFLR*LFWSLP
Trigger: GGGGAGACTCCAAAAGAGTCATCGCAGGAAGAAGTT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGGTACCATGTGATATCTaGGGGCCTGAACACCTTAAT +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMVPCDI*GPEHLN
Trigger: ATTAAGGTGTTCAGGCCCTCAGATATCACATGGTAC...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCATACATGGCACCAACTaGAAAGGCGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPIHGTN*KGDFMV
Trigger: AACCATGAAATCGCCTTTTCAGTTGGTGCCATGTAT...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTATACATGGCACCAACTaGAAAGGCGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVIHGTN*KGDFMV
Trigger: AACCATGAAATCGCCTTTTCAGTTGGTGCCATGTAT...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAATTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGCTCCGGATATCTTTTaGAACATCCATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQAPDIF*NIHPTM
Trigger: CATGGTGGGATGGATGTTGCAAAAGATATCCGGAGC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACTGCCCTTGTAAGACTTaGCTGTCTCTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FGLPITATAVIPKGAGCNCPCKT*LSLLPV
Trigger: TACTGGAAGAAGAGACAGCCAAGTCTTACAAGGGCA...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTCGCTTATCCAACAATaGCTTGGCAAAACATCCATC +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQSLIQQ*LGKTSI
Trigger: GATGGATGTTTTGCCAAGTCATTGTTGGATAAGCGA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTCCCATGGTGGAAATTaGAATGGGACCATCTTACAT +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQSHGGN*NGTILH
Trigger: ATGTAAGATGGTCCCATTTCAATTTCCACCATGGGA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGAGGAGCTCCAGCATATTaGACGAACAGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRGAPAY*TNSGGR
Trigger: TCTGCCGCCGCTGTTCGTGCAATATGCTGGAGCTCC...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTATAAGAGAAAACAATaGTGGCAATGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQYKRKQ*WQCHGC
Trigger: GCAGCCATGGCATTGCCAGCATTGTTTTCTCTTATA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGTATAAGAGAAAACAATaGTGGCAATGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMYKRKQ*WQCHGC
Trigger: GCAGCCATGGCATTGCCAGCATTGTTTTCTCTTATA...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATCGAAGCTTGGTACCCTaGAGCTACTGCTCGCGAGGA +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNRSLVP*SYCSRG
Trigger: TCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCG...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR GCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTGTCTTTTGGAAGATTTaGCACCAATTTAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVVFWKI*HQFSDV
Trigger: GACGTCACTAAATTGGTGGCAAATCTTCCAAAAGAC...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGACATTTCTGGAGCCATaGAAATGGTACATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMTFLEP*KWYMQS
Trigger: AGACTGCATGTACCATTTGCATGGCTCCAGAAATGT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACACATTTCTGGAGCCATaGAAATGGTACATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FGLPITATAVIPKGAGCNTFLEP*KWYMQS
Trigger: AGACTGCATGTACCATTTGCATGGCTCCAGAAATGT...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMNHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGCAGTACTGGCTCCCTTaGATAAATGGAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLQYWLP*INGTRQ
Trigger: TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTG...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTACATCCATCCCACCATaGCAAAATGCATTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVTSIPP*QNAFLK
Trigger: CTTCAAAAATGCATTTTGGCATGGTGGGATGGATGT...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTATGCTGGCAATGCCATaGCTGCCCAGTGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIMLAMP*LPSVGW
Trigger: CCAGCCTACACTGGGCAGCCATGGCATTGCCAGCAT...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTGCAGAGGGCGAAGCTTaGTACCCTGCAGCTACTGCT +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESAEGEA*YPAATA
Trigger: AGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGC...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CCA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTTGGTGGAAATTGAAATaGGACCATCTTACATTCAGC +
Preference number: 4 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVWWKLK*DHLTFS
Trigger: GCTGAATGTAAGATGGTCCCATTTCAATTTCCACCA...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
3UTR CAA 72 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCAACCATTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAP*HKWNQATICIC
Trigger: ACAAATGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCATCTGGATTTGCTTTaGACAGAAGCTAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPHLDLL*TEAKIQ
Trigger: TTGGATTTTAGCTTCTGTTCAAAGCAAATCCAGATG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGACTCCAATCTATGACTaGACTGAGGGTATATCTGCG +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLTPIYD*TEGISA
Trigger: CGCAGATATACCCTCAGTTCAGTCATAGATTGGAGT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTGGAGCTCCAGCATATTaGACGAACAGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSGAPAY*TNSGGR
Trigger: TCTGCCGCCGCTGTTCGTGCAATATGCTGGAGCTCC...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGTACCCTGCAGCTACTaGTCGCGAGGAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVVPCSY*SRGVPA
Trigger: AGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTAC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGAAGCTGAAATCTACTTaGAGAGACCAGGATAACTAC +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMKLKST*RDQDNY
Trigger: GTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCGCAGTTAGTTTTTCATaGCCTTTTGTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPAVSFS*PFVSLH
Trigger: ATGTAGTGACACAAAAGGGCATGAAAAACTAACTGC...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGATGCTGGCAATGCCATaGCTGCCCAGTGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRMLAMP*LPSVGW
Trigger: CCAGCCTACACTGGGCAGCCATGGCATTGCCAGCAT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTTGTATAGTGGGATATaGGTGAGCATGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQLYSGI*VSMVYI
Trigger: GATGTAAACCATGCTCACCCATATCCCACTATACAA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGATCAGTCAAGCTGTCTaGCAATTGTACTACCATCTC +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLISQAV*QLYYHL
Trigger: GAGATGGTAGTACAATTGTCAGACAGCTTGACTGAT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTGCTGCAAGTTCTAAATaGGACCCAAGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESAASSK*DPSPAV
Trigger: GACTGCGGGACTTGGGTCTCATTTAGAACTTGCAGC...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATCCCATGGTGGAAATTaGAATGGGACCATCTTACAT +
Preference number: 4 (lower is better)
Translates to: GIIQYWLPCINGTRQPFASHGGN*NGTILH
Trigger: ATGTAAGATGGTCCCATTTCAATTTCCACCATGGGA...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGCATCTGGATTTGCTTTaGACAGAAGCTAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQHLDLL*TEAKIQ
Trigger: TTGGATTTTAGCTTCTGTTCAAAGCAAATCCAGATG...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACTGTATCTATTTTCCTaGAAACAGTCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQLYLFS*KQSMPH
Trigger: GTGTGGCATTGACTGTTTTCAGGAAAATAGATACAG...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGTTAAGACCATGTCCATaGGTGTTAAAACCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLLRPCP*VLKPSY
Trigger: GTAGCTGGGTTTTAACACTCATGGACATGGTCTTAA...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGGAGCTCCAGCATATTaGACGAACAGCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSGAPAY*TNSGGR
Trigger: TCTGCCGCCGCTGTTCGTGCAATATGCTGGAGCTCC...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGATCACTAGTTTCAGATaGCACTACAAAGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMITSFR*HYKVLE
Trigger: TTCAAGGACTTTGTAGTGGCATCTGAAACTAGTGAT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGATCACTAGTTTCAGATaGCACTACAAAGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQITSFR*HYKVLE
Trigger: TTCAAGGACTTTGTAGTGGCATCTGAAACTAGTGAT...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGAACCAGGCAACCATTTaGATTTGTATAGTGGGATAT +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMNQATI*ICIVGY
Trigger: ATATCCCACTATACAAATGCAAATGGTTGCCTGGTT...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACAACCAGGCAACCATTTaGATTTGTATAGTGGGATAT +
Preference number: 4 (lower is better)
Translates to: FGLPITATAVIPKGAGCNNQATI*ICIVGY
Trigger: ATATCCCACTATACAAATGCAAATGGTTGCCTGGTT...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCAGCCACTTACTGGAGTTaGATCTGGATTTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GIIQYWLPCINGTRQPFAATYWS*IWICFE
Trigger: TTCAAAGCAAATCCAGATGCAACTCCAGTAAGTGGC...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTATGCTGGCAATGCCATaGCTGCCCAGTGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVMLAMP*LPSVGW
Trigger: CCAGCCTACACTGGGCAGCCATGGCATTGCCAGCAT...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGATGCTGGCAATGCCATaGCTGCCCAGTGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRMLAMP*LPSVGW
Trigger: CCAGCCTACACTGGGCAGCCATGGCATTGCCAGCAT...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLEQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAATTAGCATGTGGGCGTaGTTTTCTAACCTTAGATAC +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQISMWA*FSNLRY
Trigger: GTATCTAAGGTTAGAAAACCACGCCCACATGCTAAT...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGACCCATATTAGCATGTaGGCGTGGTTTTCTAACCTT +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLTHISM*AWFSNL
Trigger: AAGGTTAGAAAACCACGCCCACATGCTAATATGGGT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACTCCCGGGGACATATTTaGGGGTTATCATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHSRGHI*GLSCSL
Trigger: AAGACTACATGATAACCCTCAAATATGTCCCCGGGA...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGCTGCAAGTTCTAAATaGGACCCAAGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRAASSK*DPSPAV
Trigger: GACTGCGGGACTTGGGTCTCATTTAGAACTTGCAGC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATAACTTCTTCCTGCGATaGCTCTTTTGGAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNNFFLR*LFWSLP
Trigger: GGGGAGACTCCAAAAGAGTCATCGCAGGAAGAAGTT...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAATTTGTGTCACTACATTaGAAACTGTCATCTTACGGT +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQFVSLH*KLSSYG
Trigger: ACCGTAAGATGACAGTTTTCAATGTAGTGACACAAA...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACATCTGGATTTGCTTTaGACAGAAGCTAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQHLDLL*TEAKIQ
Trigger: TTGGATTTTAGCTTCTGTTCAAAGCAAATCCAGATG...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACCTCACCCCTAAGGAGTaGTCTCTGAGTTTACCATAT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHLTPKE*SLSLPY
Trigger: ATATGGTAAACTCAGAGATCACTCCTTAGGGGTGAG...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGCTCTTGTGTAAATGGTaGTCCAATTCACCCTACTTA +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLLLCKW*SNSPYL
Trigger: TAAGTAGGGTGAATTGGATCACCATTTACACAAGAG...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTG +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNKERQR*DPAQTV
Trigger: CACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTT...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTCCAGAGCACGGTAAATaGCCCAGAAGTTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIPEHGK*PRSLAD
Trigger: ATCTGCCAAACTTCTGGGGCATTTACCGTGCTCTGG...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR GCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGACATCCATCCCACCATaGCAAAATGCATTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLTSIPP*QNAFLK
Trigger: CTTCAAAAATGCATTTTGGCATGGTGGGATGGATGT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATGCACAAACAGTGGTGTaGCGACTCCGTTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNAQTVV*RLRLAV
Trigger: AACAGCTAAACGGAGTCGCCACACCACTGTTTGTGC...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTGCACAAACAGTGGTGTaGCGACTCCGTTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESAQTVV*RLRLAV
Trigger: AACAGCTAAACGGAGTCGCCACACCACTGTTTGTGC...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR CCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGCTGCCCAGTGTAGGCTaGAGTCTCCAGGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRLPSVG*SLQGDF
Trigger: AAAATCCCCCTGGAGACTCCAGCCTACACTGGGCAG...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACAAGAGAAAACAATGCTaGCAATGCCATGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYKRKQC*QCHGCP
Trigger: TGGGCAGCCATGGCATTGCCAGCATTGTTTTCTCTT...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAAGCTCCCTTGCATAAATaGAACCAGGCAACCATTTGC +
Preference number: 4 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQAPLHK*NQATIC
Trigger: GCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGC...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGATTAGCATGTGGGCGTaGTTTTCTAACCTTAGATAC +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLISMWA*FSNLRY
Trigger: GTATCTAAGGTTAGAAAACCACGCCCACATGCTAAT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTCTGATGTTTAAACGCTCACTTTaGTGCATTTCCAAATGTTAC +
Preference number: 4 (lower is better)
Translates to: KRRTFPGCQCPSWQTVLMFKRSL*CISKCY
Trigger: GTAACATTTGGAAATGCACCAAAGTGAGCGTTTAAA...CATCAGAACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTCCCGGGGACATATTTaGGGGTTATCATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYSRGHI*GLSCSL
Trigger: AAGACTACATGATAACCCTCAAATATGTCCCCGGGA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACCCACTACAAAGTCCTTaGAGGCATCAATGGATCTAT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHPLQSP*RHQWIY
Trigger: ATAGATCCATTGATGCCTTCAAGGACTTTGTAGTGG...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGCTGCAAGTTCTAAATaGGACCCAAGTCCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHAASSK*DPSPAV
Trigger: GACTGCGGGACTTGGGTCTCATTTAGAACTTGCAGC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTG +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVKERQR*DPAQTV
Trigger: CACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTT...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR GCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGATCACTAGTTTCAGATaGCACTACAAAGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLITSFR*HYKVLE
Trigger: TTCAAGGACTTTGTAGTGGCATCTGAAACTAGTGAT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCACTTAAAATAGAGTCCTaGTCCATGCAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GIIQYWLPCINGTRQPFALKIES*SMQVLL
Trigger: AAGAAGAACTTGCATGGAGCAGGACTCTATTTTAAG...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATCCTGAAAACAGTCAATaGCACACACTGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNPENSQ*HTLRQD
Trigger: GTCCTGTCTCAGTGTGTGGCATTGACTGTTTTCAGG...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTAAGAGAAAACAATGCTaGCAATGCCATGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIKRKQC*QCHGCP
Trigger: TGGGCAGCCATGGCATTGCCAGCATTGTTTTCTCTT...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATGCAAAGGCCACTTACTaGAGTTGCATCTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNAKATY*SCIWIC
Trigger: GCAAATCCAGATGCAACTCCAGTAAGTGGCCTTTGC...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATCAGAGATCAAGTACTaGAAAACGGTGTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: GIIQYWLPCINGTRQPFASEIKY*KTVWFL
Trigger: TAAAAACCACACCGTTTTCCAGTACTTGATCTCTGA...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSPHYPS*NLLAET
Trigger: GGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGG...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGTCAATGCCACACACTaGGACAGGACCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVVNATH*DRTYQQ
Trigger: TTGCTGATAGGTCCTGTCTCAGTGTGTGGCATTGAC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACCTGTATCTATTTTCCTaGAAACAGTCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHLYLFS*KQSMPH
Trigger: GTGTGGCATTGACTGTTTTCAGGAAAATAGATACAG...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTTAAGACCATGTCCATaGGTGTTAAAACCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYLRPCP*VLKPSY
Trigger: GTAGCTGGGTTTTAACACTCATGGACATGGTCTTAA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATCTCACCCCTAAGGAGTaGTCTCTGAGTTTACCATAT +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNLTPKE*SLSLPY
Trigger: ATATGGTAAACTCAGAGATCACTCCTTAGGGGTGAG...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTACTCCAATCTATGACTaGACTGAGGGTATATCTGCG +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESTPIYD*TEGISA
Trigger: CGCAGATATACCCTCAGTTCAGTCATAGATTGGAGT...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCAGTACTGGCTCCCTTaGATAAATGGAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRQYWLP*INGTRQ
Trigger: TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTTGGAGTCTCCCCTCTaGCAAGGCATAATTCAGTAC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNLESPL*QGIIQY
Trigger: GTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTCCTGAAAACAGTCAATaGCACACACTGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSPENSQ*HTLRQD
Trigger: GTCCTGTCTCAGTGTGTGGCATTGACTGTTTTCAGG...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACCCTGAAAACAGTCAATaGCACACACTGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNPENSQ*HTLRQD
Trigger: GTCCTGTCTCAGTGTGTGGCATTGACTGTTTTCAGG...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGTTTCTACCAAAGAGGTaGAAAGCTTTCAGTATCATT +
Preference number: 4 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLFLPKR*KAFSII
Trigger: AATGATACTGAAAGCTTTGCACCTCTTTGGTAGAAA...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGCACAAACAGTGGTGTaGCGACTCCGTTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHAQTVV*RLRLAV
Trigger: AACAGCTAAACGGAGTCGCCACACCACTGTTTGTGC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTGCCCTTGTAAGACTTaGCTGTCTCTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNCPCKT*LSLLPV
Trigger: TACTGGAAGAAGAGACAGCCAAGTCTTACAAGGGCA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTATCCAACAATGACTTaGCAAAACATCCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNYPTMT*QNIHPG
Trigger: CCCGGGATGGATGTTTTGCCAAGTCATTGTTGGATA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGA +
Preference number: 4 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYGIIQY*LPCING
Trigger: TCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACTTTATGAAGCAAACATaGACTGTTACCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHFMKQT*TVTSQC
Trigger: ACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAA...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACGAAGATAAATGCAAGTaGGAATCCAAGTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHEDKCK*ESKFVS
Trigger: AGACACAAACTTGGATTCTCACTTGCATTTATCTTC...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTCGCTTATCCAACAATaGCTTGGCAAAACATCCATC +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHISLIQQ*LGKTSI
Trigger: GATGGATGTTTTGCCAAGTCATTGTTGGATAAGCGA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTCGCTTATCCAACAATaGCTTGGCAAAACATCCATC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNSLIQQ*LGKTSI
Trigger: GATGGATGTTTTGCCAAGTCATTGTTGGATAAGCGA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATATCAGTCAAGCTGTCTaGCAATTGTACTACCATCTC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNISQAV*QLYYHL
Trigger: GAGATGGTAGTACAATTGTCAGACAGCTTGACTGAT...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAAGCTGCAGTTTGTATCTaGAGAATAAAGCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQAAVCI*RIKLGV
Trigger: AACACCTAGCTTTATTCTTCAGATACAAACTGCAGC...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR TCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTCCTCACTATCCAAGCTaGAATCTACTTGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSPHYPS*NLLAET
Trigger: GGTCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGG...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTATAGTGGGATATGGGTaGGCATGGTTTACATCAGGA +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSIVGYG*AWFTSG
Trigger: TCCTGATGTAAACCATGCTCACCCATATCCCACTAT...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGATAGTGGGATATGGGTaGGCATGGTTTACATCAGGA +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRIVGYG*AWFTSG
Trigger: TCCTGATGTAAACCATGCTCACCCATATCCCACTAT...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTGTACCATGTGATATCTaGGGGCCTGAACACCTTAAT +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSVPCDI*GPEHLN
Trigger: ATTAAGGTGTTCAGGCCCTCAGATATCACATGGTAC...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTATAAGAGAAAACAATaGTGGCAATGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNYKRKQ*WQCHGC
Trigger: GCAGCCATGGCATTGCCAGCATTGTTTTCTCTTATA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACAGGATAACTACAGGCTaGAGTTTGTATCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHRITTG*SLYLKN
Trigger: ATTCTTCAGATACAAACTGCAGCCTGTAGTTATCCT...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESNHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTAATCACAGTTCCCACTaGTTTCTACACTGTACAGTG +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHINHSSH*FLHCTV
Trigger: CACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATT...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTCTCCAGGGGGATTTTTaGCCTTCCTTGTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSLQGDF*PSLCLL
Trigger: AAGAAGACACAAGGAAGGCCAAAAATCCCCCTGGAG...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357116.4
CDS-3UTR CCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTAAGAGAAAACAATGCTaGCAATGCCATGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSKRKQC*QCHGCP
Trigger: TGGGCAGCCATGGCATTGCCAGCATTGTTTTCTCTT...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTCTGGAGCCATGCAAATaGTACATGCAGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVLEPCK*YMQSET
Trigger: TGTCTCAGACTGCATGTACCATTTGCATGGCTCCAG...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGCTCCCTTGCATAAATaGAACCAGGCAACCATTTGC +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVAPLHK*NQATIC
Trigger: GCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATGCTGCAGTTTGTATCTaGAGAATAAAGCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNAAVCI*RIKLGV
Trigger: AACACCTAGCTTTATTCTTCAGATACAAACTGCAGC...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGTACCATGTGATATCTaGGGGCCTGAACACCTTAAT +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVVPCDI*GPEHLN
Trigger: ATTAAGGTGTTCAGGCCCTCAGATATCACATGGTAC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGACTCTTGTGTAAATGGTaGTCCAATTCACCCTACTTA +
Preference number: 4 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRLLCKW*SNSPYL
Trigger: TAAGTAGGGTGAATTGGATCACCATTTACACAAGAG...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTATAAGAGAAAACAATaGTGGCAATGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNYKRKQ*WQCHGC
Trigger: GCAGCCATGGCATTGCCAGCATTGTTTTCTCTTATA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAATTGTATATTTTCAACTaGCCTTGTAAGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQLYIFN*PCKTWL
Trigger: CAGCCAAGTCTTACAAGGGCAGTTGAAAATATACAA...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTGTCTTTTGGAAGATTTaGCACCAATTTAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIVFWKI*HQFSDV
Trigger: GACGTCACTAAATTGGTGGCAAATCTTCCAAAAGAC...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACACATTTCTGGAGCCATaGAAATGGTACATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNTFLEP*KWYMQS
Trigger: AGACTGCATGTACCATTTGCATGGCTCCAGAAATGT...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAAAGGATAACTACAGGCTaGAGTTTGTATCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQRITTG*SLYLKN
Trigger: ATTCTTCAGATACAAACTGCAGCCTGTAGTTATCCT...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAAGCTGAAATCTACTTaGAGAGACCAGGATAACTAC +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESKLKST*RDQDNY
Trigger: GTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTT...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTTCTTAACTTCTTCCTaGGATGACTCTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNFLTSS*DDSFGV
Trigger: GACTCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGCCACTTACTGGAGTTaGATCTGGATTTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRATYWS*IWICFE
Trigger: TTCAAAGCAAATCCAGATGCAACTCCAGTAAGTGGC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTGCCACTTACTGGAGTTaGATCTGGATTTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSATYWS*IWICFE
Trigger: TTCAAAGCAAATCCAGATGCAACTCCAGTAAGTGGC...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTTGCCCTTGTAAGACTTaGCTGTCTCTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSCPCKT*LSLLPV
Trigger: TACTGGAAGAAGAGACAGCCAAGTCTTACAAGGGCA...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTTGCCCTTGTAAGACTTaGCTGTCTCTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVCPCKT*LSLLPV
Trigger: TACTGGAAGAAGAGACAGCCAAGTCTTACAAGGGCA...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTTATCCAACAATGACTTaGCAAAACATCCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVYPTMT*QNIHPG
Trigger: CCCGGGATGGATGTTTTGCCAAGTCATTGTTGGATA...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGA +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRGIIQY*LPCING
Trigger: TCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTGGTGGAAATTGAAATaGGACCATCTTACATTCAGC +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIWWKLK*DHLTFS
Trigger: GCTGAATGTAAGATGGTCCCATTTCAATTTCCACCA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTATTAGCATGTGGGCGTaGTTTTCTAACCTTAGATAC +
Preference number: 4 (lower is better)
Translates to: SCFIYEANMNCYQPMYESISMWA*FSNLRY
Trigger: GTATCTAAGGTTAGAAAACCACGCCCACATGCTAAT...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTACCCATATTAGCATGTaGGCGTGGTTTTCTAACCTT +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSTHISM*AWFSNL
Trigger: AAGGTTAGAAAACCACGCCCACATGCTAATATGGGT...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATATCAGTCAAGCTGTCTaGCAATTGTACTACCATCTC +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHISQAV*QLYYHL
Trigger: GAGATGGTAGTACAATTGTCAGACAGCTTGACTGAT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTCCACTACAAAGTCCTTaGAGGCATCAATGGATCTAT +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSPLQSP*RHQWIY
Trigger: ATAGATCCATTGATGCCTTCAAGGACTTTGTAGTGG...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGGCTGCAGTTTGTATCTaGAGAATAAAGCTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRAAVCI*RIKLGV
Trigger: AACACCTAGCTTTATTCTTCAGATACAAACTGCAGC...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTCTTGGCAGACTGTTCTaGTGTTCAGTGTTCTTAACT +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSLGRLF*CSVFLT
Trigger: AGTTAAGAACACTGAACATCAGAACAGTCTGCCAAG...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTTTGTGTCACTACATTaGAAACTGTCATCTTACGGT +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNFVSLH*KLSSYG
Trigger: ACCGTAAGATGACAGTTTTCAATGTAGTGACACAAA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACCTGTATCTATTTTCCTaGAAACAGTCAATGCCACAC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNLYLFS*KQSMPH
Trigger: GTGTGGCATTGACTGTTTTCAGGAAAATAGATACAG...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATTTAAGACCATGTCCATaGGTGTTAAAACCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHLRPCP*VLKPSY
Trigger: GTAGCTGGGTTTTAACACTCATGGACATGGTCTTAA...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTATACATGGCACCAACTaGAAAGGCGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVIHGTN*KGDFMV
Trigger: AACCATGAAATCGCCTTTTCAGTTGGTGCCATGTAT...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGATTGTATATTTTCAACTaGCCTTGTAAGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRLYIFN*PCKTWL
Trigger: CAGCCAAGTCTTACAAGGGCAGTTGAAAATATACAA...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACGTCTTTTGGAAGATTTaGCACCAATTTAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNVFWKI*HQFSDV
Trigger: GACGTCACTAAATTGGTGGCAAATCTTCCAAAAGAC...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTCTTAAAATAGAGTCCTaGTCCATGCAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHILKIES*SMQVLL
Trigger: AAGAAGAACTTGCATGGAGCAGGACTCTATTTTAAG...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTTCTTAACTTCTTCCTaGGATGACTCTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNFLTSS*DDSFGV
Trigger: GACTCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTGCAGTTAGTTTTTCATaGCCTTTTGTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIAVSFS*PFVSLH
Trigger: ATGTAGTGACACAAAAGGGCATGAAAAACTAACTGC...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAAAGTTGCATCTGGATTTaGTTTGAACAGAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQSCIWI*FEQKLK
Trigger: TTTTAGCTTCTGTTCAAAGCAAATCCAGATGCAACT...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR GCA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACTTTCTACCAAAGAGGTaGAAAGCTTTCAGTATCATT +
Preference number: 4 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYFLPKR*KAFSII
Trigger: AATGATACTGAAAGCTTTGCACCTCTTTGGTAGAAA...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVEQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSEQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGGAACAGATAAAGATGTaGTCTGTCACTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: ELDILYGLVSMLFCLLCREQIKM*SVTPDR
Trigger: TCTGTCTGGAGTGACAGACCACATCTTTATCTGTTC...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTTGTATAGTGGGATATaGGTGAGCATGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNLYSGI*VSMVYI
Trigger: GATGTAAACCATGCTCACCCATATCCCACTATACAA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTTTGTATAGTGGGATATaGGTGAGCATGGTTTACATC +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSLYSGI*VSMVYI
Trigger: GATGTAAACCATGCTCACCCATATCCCACTATACAA...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGGCATAATTCAGTACTaGCTCCCTTGCATAAATGGA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVGIIQY*LPCING
Trigger: TCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTTTATGAAGCAAACATaGACTGTTACCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNFMKQT*TVTSQC
Trigger: ACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACGAAGATAAATGCAAGTaGGAATCCAAGTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNEDKCK*ESKFVS
Trigger: AGACACAAACTTGGATTCTCACTTGCATTTATCTTC...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTAAGCTGAAATCTACTTaGAGAGACCAGGATAACTAC +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSKLKST*RDQDNY
Trigger: GTAGTTATCCTGGTCTCTGCAAGTAGATTTCAGCTT...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTTTCTTAACTTCTTCCTaGGATGACTCTTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSFLTSS*DDSFGV
Trigger: GACTCCAAAAGAGTCATCGCAGGAAGAAGTTAAGAA...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTGCAGTTAGTTTTTCATaGCCTTTTGTGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSAVSFS*PFVSLH
Trigger: ATGTAGTGACACAAAAGGGCATGAAAAACTAACTGC...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATTTTCTACCAAAGAGGTaGAAAGCTTTCAGTATCATT +
Preference number: 4 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNFLPKR*KAFSII
Trigger: AATGATACTGAAAGCTTTGCACCTCTTTGGTAGAAA...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGTTTTCCAGATCCCTTTaGGAAAAATTGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRFSRSL*EKLLPS
Trigger: TGAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAA...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATTTTTCCAGATCCCTTTaGGAAAAATTGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHFSRSL*EKLLPS
Trigger: TGAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAA...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATTTTGTGTCACTACATTaGAAACTGTCATCTTACGGT +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHFVSLH*KLSSYG
Trigger: ACCGTAAGATGACAGTTTTCAATGTAGTGACACAAA...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR TCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTCCCAAAGAAGAGAGGTaGTTTACCATATCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVPKEER*FTISVN
Trigger: ATTAACTGATATGGTAAATCACCTCTCTTCTTTGGG...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR TCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATCCCAAAGAAGAGAGGTaGTTTACCATATCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHPKEER*FTISVN
Trigger: ATTAACTGATATGGTAAATCACCTCTCTTCTTTGGG...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTTTGTATATTTTCAACTaGCCTTGTAAGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FIYEANMNCYQPMYESNSLYIFN*PCKTWL
Trigger: CAGCCAAGTCTTACAAGGGCAGTTGAAAATATACAA...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATTTGTATATTTTCAACTaGCCTTGTAAGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHLYIFN*PCKTWL
Trigger: CAGCCAAGTCTTACAAGGGCAGTTGAAAATATACAA...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTAACCAGGCAACCATTTaGATTTGTATAGTGGGATAT +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVNQATI*ICIVGY
Trigger: ATATCCCACTATACAAATGCAAATGGTTGCCTGGTT...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTACTAAAACGTACTACTaGTTTTCATTCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IISNLVFNTHISMWAWFSTKTYY*FSFFGG
Trigger: ACCTCCAAAGAATGAAAACCAGTAGTACGTTTTAGT...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTTTAAACGCTCACTTTaGTGCATTTCCAAATGTTAC +
Preference number: 4 (lower is better)
Translates to: CFIYEANMNCYQPMYESNFKRSL*CISKCY
Trigger: GTAACATTTGGAAATGCACCAAAGTGAGCGTTTAAA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CCA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTTCAGAGATCAAGTACTaGAAAACGGTGTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: IYEANMNCYQPMYESNSVSEIKY*KTVWFL
Trigger: TAAAAACCACACCGTTTTCCAGTACTTGATCTCTGA...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
3UTR CAA 72 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTaGAGGACAAAAGTACACATTTATTATACTCTTAAG +
Preference number: 4 (lower is better)
Translates to: TMSMSVKTQLLG*RTKVHIYYTLK
Trigger: CTTAAGAGTATAATAAATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR GCA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGAGTTGCATCTGGATTTaGTTTGAACAGAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRSCIWI*FEQKLK
Trigger: TTTTAGCTTCTGTTCAAAGCAAATCCAGATGCAACT...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR GCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATAGTTGCATCTGGATTTaGTTTGAACAGAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHSCIWI*FEQKLK
Trigger: TTTTAGCTTCTGTTCAAAGCAAATCCAGATGCAACT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CCA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATACTAAAACGTACTACTaGTTTTCATTCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHTKTYY*FSFFGG
Trigger: ACCTCCAAAGAATGAAAACCAGTAGTACGTTTTAGT...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS TCA 90 bp AGCGCTTCTAGTCTCGGCGCGAGGCGGCGAGCGAAGCCCGGCTGCTaGGCCGCCGGCGCTTTTATACAGTTCCCGCCCGCCTGCTCCGGA +
Preference number: 5 (lower is better)
Translates to: SASSLGARRRAKPGC*AAGAFIQFPPACSG
Trigger: TCCGGAGCAGGCGGGCGGGAACTGTATAAAAGCGCCGGCGGCTCAGCAGCCGGGCTTCGCTCGCCGCCTCGCGCCGAGACTAGAAGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS GCA 90 bp AAGGCGCGGGGACGCAGAGGGCGAAGCTTGGTACCCTGCAGCTACTaGTCGCGAGGAGTCCCAGCTTACCCTCCCGGATCCGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: KARGRRGRSLVPCSY*SRGVPAYPPGSAGA
Trigger: AGCCCCAGCGGATCCGGGAGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCCCCGCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS GCA 90 bp GAGACCGCGAAGGCGCGGGGACGCAGAGGGCGAAGCTTGGTACCCTaGAGCTACTGCTCGCGAGGAGTCCCAGCTTACCCTCCCGGATCC +
Preference number: 5 (lower is better)
Translates to: ETAKARGRRGRSLVP*SYCSRGVPAYPPGS
Trigger: GGATCCGGGAGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCCCCGCGCCTTCGCGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS CCA 90 bp CAGCTACTGCTCGCGAGGAGTCCCAGCTTACCCTCCCGGATCCGCTaGGGCTCACCTGGCACCCCCGGGGACAGACGAAATACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: QLLLARSPSLPSRIR*GSPGTPGDRRNTSR
Trigger: GCGCGAGGTATTTCGTCTGTCCCCGGGGGTGCCAGGTGAGCCCCAGCGGATCCGGGAGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CAA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTGGAGCTCCAGCATATaGCACGAACAGCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPWSSSI*HEQRRQ
Trigger: CTGCCGCCGCTGTTCGTGCAATATGCTGGAGCTCCA...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGCGCAGAGGGCGAAGCTaGGTACCCTGCAGCTACTGC +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQRRGRS*VPCSYC
Trigger: GCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCG...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACAGATTAGGCCAACCTaGTCCGCTCGCCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQQIRPT*SARLGA
Trigger: GGCCCCCAGGCGAGCGGACAAGGTTGGCCTAATCTG...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CAA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGCTCCCCCGCATCCTCTaGTCTCACCCGGCAGGCACA +
Preference number: 5 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLLPRIL*SHPAGT
Trigger: TGTGCCTGCCGGGTGAGACAAGAGGATGCGGGGGAG...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS CCA 90 bp CTTCATAAGGAAAGGCAGCGCTGCGATCCAGCACAAACAGTGGTGTaGCGACTCCGTTTAGCTGTTCTGGAGCTCCAGCATATTGCACGA +
Preference number: 5 (lower is better)
Translates to: LHKERQRCDPAQTVV*RLRLAVLELQHIAR
Trigger: TCGTGCAATATGCTGGAGCTCCAGAACAGCTAAACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000552044.1
ENST00000644744.1
CDS-3UTR CAA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACCCTGCGATGACTCTTTaGGAGTCTCCCCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FGLPITATAVIPKGAGCNPAMTL*ESPLCQ
Trigger: TTGGCAGAGGGGAGACTCCAAAAGAGTCATCGCAGG...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTGGCTCCGGATATCTTTaGCAACATCCATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVGSGYL*QHPSHH
Trigger: ATGGTGGGATGGATGTTGCAAAAGATATCCGGAGCC...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS GCA 90 bp AAAGCAGCTGCTTTGTTGTGTCTTCTTCATAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTGGTGTGGCGACTCCGTTTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: KAAALLCLLHKERQR*DPAQTVVWRLRLAV
Trigger: AACAGCTAAACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAACAAAGCAGCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552044.1
CDS GCA 90 bp AGTGAGAATCCAAGTTTGTGTCTTCTTCATAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTGGTGTGGCGACTCCGTTTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SENPSLCLLHKERQR*DPAQTVVWRLRLAV
Trigger: AACAGCTAAACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAAACTTGGATTCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCTCCCATGGTGGAAATaGAAATGGGACCATCTTACA +
Preference number: 5 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPLPWWK*KWDHLT
Trigger: TGTAAGATGGTCCCATTTCAATTTCCACCATGGGAG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAGGCTCCGGATATCTTTaGCAACATCCATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQGSGYL*QHPSHH
Trigger: ATGGTGGGATGGATGTTGCAAAAGATATCCGGAGCC...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTCAGATAGTCCACGCATaGGGTAGCCCGAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: IISNLVFNTHISMWAWFSQIVHA*GSPSAA
Trigger: CGCTGCGCTCGGGCTACCCAATGCGTGGACTATCTG...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACCAGATAGTCCACGCATaGGGTAGCCCGAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: CFIYEANMNCYQPMYESNQIVHA*GSPSAA
Trigger: CGCTGCGCTCGGGCTACCCAATGCGTGGACTATCTG...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCAGATAGTCCACGCATaGGGTAGCCCGAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRQIVHA*GSPSAA
Trigger: CGCTGCGCTCGGGCTACCCAATGCGTGGACTATCTG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: GIIQYWLPCINGTRQPFASVLAP*HKWNQA
Trigger: TGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGA...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGAGCACAATGTCCATCTaGGGAATTCCTGCCAAATTC +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQSTMSI*GIPAKF
Trigger: GAATTTGGCAGGAATTCCCAAGATGGACATTGTGCT...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACCAGATCCCTTCAGTTTaGACGAGAGGATTAAATAGG +
Preference number: 5 (lower is better)
Translates to: FGLPITATAVIPKGAGCNQIPSV*TRGLNR
Trigger: CCTATTTAATCCTCTCGTCAAAACTGAAGGGATCTG...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTTCTCAGGACTTAATGTaGAAGAAACCACACAATCAC +
Preference number: 5 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVSQDLM*KKPHNH
Trigger: GTGATTGTGTGGTTTCTTCAACATTAAGTCCTGAGA...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CAAGGGAAAAGGCGGACTTTCCCAGGATGCCAATGTCCTTCTTGGCAGACTGTTACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: QGKRRTFPGCQCPSWQTVTTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...AACAGTCTGCCAAGAAGGACATTGGCATCCTGGGAAAGTCCGCCTTTTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQEPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTAACCTTAGATACCCTGCGATGACTCTTTaGGAGTCTCCCCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LVFNTHISMWAWFSNLRYPAMTL*ESPLCQ
Trigger: TTGGCAGAGGGGAGACTCCAAAAGAGTCATCGCAGG...GTATCTAAGGTTAGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAAGCACAATGTCCATCTaGGGAATTCCTGCCAAATTC +
Preference number: 5 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQSTMSI*GIPAKF
Trigger: GAATTTGGCAGGAATTCCCAAGATGGACATTGTGCT...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TTTGGCCTTCCTATTACTGCTACTGCTGTCATTCCTAAGGGAGCTGGCTGCAACACCCAGCTACTAGGTTaGAGGACAAAAGTACACATT +
Preference number: 5 (lower is better)
Translates to: FGLPITATAVIPKGAGCNTQLLG*RTKVHI
Trigger: AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGT...GTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTTGGAGCTCCAGCATATaGCACGAACAGCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IYEANMNCYQPMYESNSVWSSSI*HEQRRQ
Trigger: CTGCCGCCGCTGTTCGTGCAATATGCTGGAGCTCCA...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
CDS-3UTR CAA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCAGCCACTACAAAGTCCTaGAAGGCATCAATGGATCTA +
Preference number: 5 (lower is better)
Translates to: GIIQYWLPCINGTRQPFAATTKS*KASMDL
Trigger: TAGATCCATTGATGCCTTCAAGGACTTTGTAGTGGC...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTCTCAGGACTTAATGTaGAAGAAACCACACAATCAC +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQSQDLM*KKPHNH
Trigger: GTGATTGTGTGGTTTCTTCAACATTAAGTCCTGAGA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATCCTGCGATGACTCTTTaGGAGTCTCCCCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNPAMTL*ESPLCQ
Trigger: TTGGCAGAGGGGAGACTCCAAAAGAGTCATCGCAGG...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCAATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: GIIQYWLPCINGTRQPFAMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp GATGACTCTTTTGGAGTCTCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCCCAGAGTTGGATATTTaGTATGGGTTAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: DDSFGVSPLPRHNSVLAPPELDI*YGLVSM
Trigger: CATTGAAACTAACCCATACAAAATATCCAACTCTGG...GGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGAGACTCCAAAAGAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGCTCTCTCTCTTTCTCTaGCAACATACTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQLSLFL*QHTYLI
Trigger: AATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAG...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTCTCCAGGGGGATTTTaGGCCTTCCCTTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHISPGGF*AFPFSG
Trigger: TCCTGAGAAAGGGAAGGCCAAAAATCCCCCTGGAGA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS-3UTR CAA 90 bp TCCCCTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGTTTTGTGTCACTACATaGAAAACTGTCATCTTACGG +
Preference number: 5 (lower is better)
Translates to: SPLPRHNSVLAPLHKWNQFCVTT*KTVILR
Trigger: CCGTAAGATGACAGTTTTCAATGTAGTGACACAAAA...CTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CTCTGCCAAGGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAAAGTGAGAATCCAAGTTaGTGTCTTCTTCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: LCQGIIQYWLPCINGTRQSENPS*CLLHKE
Trigger: TTCCTTATGAAGAAGACACAAACTTGGATTCTCACT...TTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCCTTGGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACGCCACTACAAAGTCCTaGAAGGCATCAATGGATCTA +
Preference number: 5 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHATTKS*KASMDL
Trigger: TAGATCCATTGATGCCTTCAAGGACTTTGTAGTGGC...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLTTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTTCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHISVLAP*HKWNQA
Trigger: TGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGA...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp AGAAGATCAGTCAAGCTGTCTGACAATTGTACTACCATCTCGCTTATCCAACAATCTCCAGGGGGATTTTaGGCCTTCCTATTACTGCTA +
Preference number: 5 (lower is better)
Translates to: RRSVKLSDNCTTISLIQQSPGGF*AFLLLL
Trigger: TAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAGA...TTGTTGGATAAGCGAGATGGTAGTACAATTGTCAGACAGCTTGACTGATCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACTCTCCAGGGGGATTTTaGGCCTTCCTTGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: CFIYEANMNCYQPMYESNSPGGF*AFLVSS
Trigger: AGAAGACACAAGGAAGGCCAAAAATCCCCCTGGAGA...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357116.4
CDS-3UTR CAA 90 bp ACCATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 5 (lower is better)
Translates to: TMSMSVKTQLLGLRTKVHEPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...GTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGTCAGTACTGGCTCCCTaGCATAAATGGAACCAGGCA +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRSVLAP*HKWNQA
Trigger: TGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGA...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTTGCCAAATCCAATCACAGTTCCCACTGCTTTCTACACTGTACAGTGGCTGTTTTGTGTCACTACATaGAAAACTGTCATCTTACGG +
Preference number: 5 (lower is better)
Translates to: MLPNPITVPTAFYTVQWLFCVTT*KTVILR
Trigger: CCGTAAGATGACAGTTTTCAATGTAGTGACACAAAA...CAGCCACTGTACAGTGTAGAAAGCAGTGGGAACTGTGATTGGATTTGGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp GGCATAATTCAGTACTGGCTCCCTTGCATAAATGGAACCAGGCAACCATTTGCATCACAGAATCCAGAGTaGGATATTTTGTATGGGTTA +
Preference number: 5 (lower is better)
Translates to: GIIQYWLPCINGTRQPFASQNPE*DILYGL
Trigger: TAACCCATACAAAATATCCAACTCTGGATTCTGTGA...TGCAAATGGTTGCCTGGTTCCATTTATGCAAGGGAGCCAGTACTGAATTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTTCTCCAGGGGGATTTTaGGCCTTCCTATTACTGCTA +
Preference number: 5 (lower is better)
Translates to: SCFIYEANMNCYQPMYESSPGGF*AFLLLL
Trigger: TAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAGA...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTCTCCCATGGTGGAAATaGAAATGGGACCATCTTACA +
Preference number: 5 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHILPWWK*KWDHLT
Trigger: TGTAAGATGGTCCCATTTCAATTTCCACCATGGGAG...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp AGAAATAACACAGTTAATGTCCAAGCAGCTAGCATCCAAAATAATGTTCAGCATGCGCGCCCTACTCACTaGTGTCTTCTTCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: RNNTVNVQAASIQNNVQHARPTH*CLLHKE
Trigger: TTCCTTATGAAGAAGACACAAGTGAGTAGGGCGCGC...ATGCTGAACATTATTTTGGATGCTAGCTGCTTGGACATTAACTGTGTTATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGAGAACCAGGCAACCATTaGCATTTGTATAGTGGGATA +
Preference number: 5 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQREPGNH*HLYSGI
Trigger: TATCCCACTATACAAATGCAAATGGTTGCCTGGTTC...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACATGCCAATGTCCTTCTaGGCAGACTGTTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: CFIYEANMNCYQPMYESNMPMSF*ADCSDV
Trigger: AACATCAGAACAGTCTGCCAAGAAGGACATTGGCAT...GTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCAGATCCCTTCAGTTTaGACGAGAGGATTAAATAGG +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRQIPSV*TRGLNR
Trigger: CCTATTTAATCCTCTCGTCAAAACTGAAGGGATCTG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTGCCACTACAAAGTCCTaGAAGGCATCAATGGATCTA +
Preference number: 5 (lower is better)
Translates to: IYEANMNCYQPMYESNSVATTKS*KASMDL
Trigger: TAGATCCATTGATGCCTTCAAGGACTTTGTAGTGGC...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp GTTACCAGCCAATGTACGAAAGTAACAGTGTTGATACAAGCCACAATTACACTTACTACAGGCTGCAGTTaGTATCTGAAGAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: VTSQCTKVTVLIQATITLTTGCS*YLKNKA
Trigger: AGCTTTATTCTTCAGATACAAACTGCAGCCTGTAGT...AAGTGTAATTGTGGCTTGTATCAACACTGTTACTTTCGTACATTGGCTGGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS-3UTR CAA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTCTCCCATGGTGGAAATaGAAATGGGACCATCTTACA +
Preference number: 5 (lower is better)
Translates to: IYEANMNCYQPMYESNSVLPWWK*KWDHLT
Trigger: TGTAAGATGGTCCCATTTCAATTTCCACCATGGGAG...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGACTCTCTCTCTTTCTCTaGCAACATACTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRLSLFL*QHTYLI
Trigger: AATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAG...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATAGTGAGAATCCAAGTTaGTGTCTTCTTCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNSENPS*CLLHKE
Trigger: TTCCTTATGAAGAAGACACAAACTTGGATTCTCACT...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTCAGATCCCTTCAGTTTaGACGAGAGGATTAAATAGG +
Preference number: 5 (lower is better)
Translates to: FIYEANMNCYQPMYESNSQIPSV*TRGLNR
Trigger: CCTATTTAATCCTCTCGTCAAAACTGAAGGGATCTG...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp CCTTTGAGAAAAATTGTTACCCTCACTATCCAAGCTGAAATCTACTTGCAGAGAGTTTTTCATGCCCTTTaGTGTCACTACATTGAAAAC +
Preference number: 5 (lower is better)
Translates to: PLRKIVTLTIQAEIYLQRVFHAL*CHYIEN
Trigger: GTTTTCAATGTAGTGACACAAAAGGGCATGAAAAAC...TCTCTGCAAGTAGATTTCAGCTTGGATAGTGAGGGTAACAATTTTTCTCAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp AACACATTTAATAAGCAGGACACATCTCCCCTCTCCTACCATGTCAGATTTAATGTTTTTCATGCCCTTTaGTGTCACTACATTGAAAAC +
Preference number: 5 (lower is better)
Translates to: NTFNKQDTSPLSYHVRFNVFHAL*CHYIEN
Trigger: GTTTTCAATGTAGTGACACAAAAGGGCATGAAAAAC...ATTAAATCTGACATGGTAGGAGAGGGGAGATGTGTCCTGCTTATTAAATGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp GAGTTGGATATTTTGTATGGGTTAGTTTCAATGCTATTTTGTCTTCTTTGTCGGACCCAGCTACTAGGTTaGAGGACAAAAGTACACATT +
Preference number: 5 (lower is better)
Translates to: ELDILYGLVSMLFCLLCRTQLLG*RTKVHI
Trigger: AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGT...CCGACAAAGAAGACAAAATAGCATTGAAACTAACCCATACAAAATATCCAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTACCCAGCTACTAGGTTaGAGGACAAAAGTACACATT +
Preference number: 5 (lower is better)
Translates to: FIYEANMNCYQPMYESNSTQLLG*RTKVHI
Trigger: AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGT...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATGTCCATGAGTGTTAAAACCCAGCTACTAGGTTTGAGGACAAAAGTACACATTCAGCAACATTATGAATaGTGTGATCAAACTCCACAA +
Preference number: 5 (lower is better)
Translates to: MSMSVKTQLLGLRTKVHIQQHYE*CDQTPQ
Trigger: TTGTGGAGTTTGATCACACAATTCATAATGTTGCTG...AATGTGTACTTTTGTCCTCAAACCTAGTAGCTGGGTTTTAACACTCATGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp AGCTGCTTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTCAGCAACATTATGAATaGTGTGATCAAACTCCACAA +
Preference number: 5 (lower is better)
Translates to: SCFIYEANMNCYQPMYESQQHYE*CDQTPQ
Trigger: TTGTGGAGTTTGATCACACAATTCATAATGTTGCTG...ACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAAGCAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCTCTCTCTCTTTCTCTaGCAACATACTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRLSLFL*QHTYLI
Trigger: AATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGTTTTTCCAGATCCCTTaGAGAAAAATTGTTACCCTC +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRFFQIP*RKIVTL
Trigger: GAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAAA...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATTATAAGTAACCTAGTTTTCAACACCCATATTAGCATGTGGGCGTGGTTTTCTTTTTGTGTCACTACATaGAAAACTGTCATCTTACGG +
Preference number: 5 (lower is better)
Translates to: IISNLVFNTHISMWAWFSFCVTT*KTVILR
Trigger: CCGTAAGATGACAGTTTTCAATGTAGTGACACAAAA...AGAAAACCACGCCCACATGCTAATATGGGTGTTGAAAACTAGGTTACTTATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATAACACATTTTGCAAACACGATTTATACACCCTATAGTGGTCAAGGGAAAAGGCCAGAGTTGGATATTTaGTATGGGTTAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: ITHFANTIYTPYSGQGKRPELDI*YGLVSM
Trigger: CATTGAAACTAACCCATACAAAATATCCAACTCTGG...CCTTTTCCCTTGACCACTATAGGGTGTATAAATCGTGTTTGCAAAATGTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS-3UTR CAA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTCTCTCTCTCTTTCTCTaGCAACATACTTATCTCATT +
Preference number: 5 (lower is better)
Translates to: IYEANMNCYQPMYESNSVLSLFL*QHTYLI
Trigger: AATGAGATAAGTATGTTGCAAGAGAAAGAGAGAGAG...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp TTCATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTTTTTTCCAGATCCCTTaGAGAAAAATTGTTACCCTC +
Preference number: 5 (lower is better)
Translates to: FIYEANMNCYQPMYESNSFFQIP*RKIVTL
Trigger: GAGGGTAACAATTTTTCTCAAAGGGATCTGGAAAAA...ACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAATGAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000347404.10
ENST00000644744.1
ENST00000646633.1
CDS-3UTR CAA 90 bp ATTTATGAAGCAAACATGAACTGTTACCAGCCAATGTACGAAAGTAACAGTGTTTCACAGAATCCAGAGTaGGATATTTTGTATGGGTTA +
Preference number: 5 (lower is better)
Translates to: IYEANMNCYQPMYESNSVSQNPE*DILYGL
Trigger: TAACCCATACAAAATATCCAACTCTGGATTCTGTGA...AACACTGTTACTTTCGTACATTGGCTGGTAACAGTTCATGTTTGCTTCATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS TCA 72 bp AGTCTCGGCGCGAGGCGGCGAGCGAAGCCCGGCTGCTaGGCCGCCGGCGCTTTTATACAGTTCCCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SLGARRRAKPGC*AAGAFIQFPPA
Trigger: GGCGGGCGGGAACTGTATAAAAGCGCCGGCGGCTCAGCAGCCGGGCTTCGCTCGCCGCCTCGCGCCGAGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS GCA 72 bp CCCGCATCCTCTTGTCTCACCCGGCAGGCACAGCCCTaGACGCCCCAGCTGCAAGTCCCAGGGAGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PASSCLTRQAQP*TPQLQVPGSAG
Trigger: GCCGGCGCTCCCTGGGACTTGCAGCTGGGGCGTGCAGGGCTGTGCCTGCCGGGTGAGACAAGAGGATGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS CAA 90 bp CACTGGCGGGAGACCGCGAAGGCGCGGGGACGCAGAGGGCGAAGCTaGGTACCCTGCAGCTACTGCTCGCGAGGAGTCCCAGCTTACCCT +
Preference number: 6 (lower is better)
Translates to: HWRETAKARGRRGRS*VPCSYCSRGVPAYP
Trigger: AGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCCCCGCGCCTTCGCGGTCTCCCGCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS CCA 72 bp CTCGCGAGGAGTCCCAGCTTACCCTCCCGGATCCGCTaGGGCTCACCTGGCACCCCCGGGGACAGACGAAAT +
Preference number: 6 (lower is better)
Translates to: LARSPSLPSRIR*GSPGTPGDRRN
Trigger: ATTTCGTCTGTCCCCGGGGGTGCCAGGTGAGCCCCAGCGGATCCGGGAGGGTAAGCTGGGACTCCTCGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS CCA 72 bp AGACCGCGAAGGCGCGGGGACGCAGAGGGCGAAGCTTaGTACCCTGCAGCTACTGCTCGCGAGGAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RPRRRGDAEGEA*YPAATAREESQ
Trigger: CTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCCCCGCGCCTTCGCGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS CCA 72 bp AAGTTTGGCAGATTAGGCCAACCTTGTCCGCTCGCCTaGGGGCCCCGGACCTGCACTGGCGGGAGACCGCGA +
Preference number: 6 (lower is better)
Translates to: KFGRLGQPCPLA*GPRTCTGGRPR
Trigger: TCGCGGTCTCCCGCCAGTGCAGGTCCGGGGCCCCCAGGCGAGCGGACAAGGTTGGCCTAATCTGCCAAACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS GCA 72 bp GGACGCAGAGGGCGAAGCTTGGTACCCTGCAGCTACTaGTCGCGAGGAGTCCCAGCTTACCCTCCCGGATCC +
Preference number: 6 (lower is better)
Translates to: GRRGRSLVPCSY*SRGVPAYPPGS
Trigger: GGATCCGGGAGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS GCA 72 bp AAGGCGCGGGGACGCAGAGGGCGAAGCTTGGTACCCTaGAGCTACTGCTCGCGAGGAGTCCCAGCTTACCCT +
Preference number: 6 (lower is better)
Translates to: KARGRRGRSLVP*SYCSRGVPAYP
Trigger: AGGGTAAGCTGGGACTCCTCGCGAGCAGTAGCTGCAGGGTACCAAGCTTCGCCCTCTGCGTCCCCGCGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347404.10
CDS CAA 90 bp AGCTCCAGCATATTGCACGAACAGCGGCGGCAGATAGTCCACGCATaGGGTAGCCCGAGCGCAGCGCCCTCTCCACTGTCCCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SSSILHEQRRQIVHA*GSPSAAPSPLSLLP
Trigger: GGGAAGCAGGGACAGTGGAGAGGGCGCTGCGCTCGGGCTACCCAATGCGTGGACTATCTGCCGCCGCTGTTCGTGCAATATGCTGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000552044.1
ENST00000644744.1
CDS CAA 72 bp ATATTGCACGAACAGCGGCGGCAGATAGTCCACGCATaGGGTAGCCCGAGCGCAGCGCCCTCTCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: ILHEQRRQIVHA*GSPSAAPSPLS
Trigger: GGACAGTGGAGAGGGCGCTGCGCTCGGGCTACCCAATGCGTGGACTATCTGCCGCCGCTGTTCGTGCAATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000552044.1
ENST00000644744.1
CDS CAA 72 bp GGAGAGCCTGGGAGCTCCCGGGCGCGCCCTACTCACTaGTGTCTTCTTCATAAGGAAAGGCAGCGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: GEPGSSRARPTH*CLLHKERQRCD
Trigger: ATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAAGTGAGTAGGGCGCGCCCGGGAGCTCCCAGGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646633.1
CDS CCA 72 bp GAAAGGCAGCGCTGCGATCCAGCACAAACAGTGGTGTaGCGACTCCGTTTAGCTGTTCTGGAGCTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: ERQRCDPAQTVV*RLRLAVLELQH
Trigger: ATGCTGGAGCTCCAGAACAGCTAAACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347404.10
ENST00000357116.4
ENST00000552044.1
ENST00000644744.1
CDS GCA 72 bp CCTTCCTTGTGTCTTCTTCATAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTGGTGTGGCGACTCCGT +
Preference number: 6 (lower is better)
Translates to: PSLCLLHKERQR*DPAQTVVWRLR
Trigger: ACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357116.4
CDS GCA 72 bp CCAAGTTTGTGTCTTCTTCATAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTGGTGTGGCGACTCCGT +
Preference number: 6 (lower is better)
Translates to: PSLCLLHKERQR*DPAQTVVWRLR
Trigger: ACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAAACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347404.10
ENST00000644744.1
CDS GCA 72 bp GCTTTGTTGTGTCTTCTTCATAAGGAAAGGCAGCGCTaGGATCCAGCACAAACAGTGGTGTGGCGACTCCGT +
Preference number: 6 (lower is better)
Translates to: ALLCLLHKERQR*DPAQTVVWRLR
Trigger: ACGGAGTCGCCACACCACTGTTTGTGCTGGATCGCAGCGCTGCCTTTCCTTATGAAGAAGACACAACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552044.1
CDS CAA 72 bp ATGCAAGTGAGAATCCAAGTCTTAAGGCCTCAAGTCTaGACTCTTAATAATGCTGGGAAAATACAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: MQVRIQVLRPQV*TLNNAGKIQKE
Trigger: TTCTTTCTGTATTTTCCCAGCATTATTAAGAGTCAAGACTTGAGGCCTTAAGACTTGGATTCTCACTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552044.1