Pregenerated sensors for KISS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170498Ensembl transcript IDs: ENST00000367194.5, ENST00000625357.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCGCCCCGCATGCTCTaGCTCCTTTGGGGTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: FFYCLGLEAPAPPPLALRPPRML*LLWGLK Trigger: CTTCAGACCCCAAAGGAGTCAGAGCATGCGGGGCGG...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGACTCCTTTGGGGTCTaGAGTTCACTGCCCCGCACC | + |
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Preference number: 2 (lower is better) Translates to: FFYCLGLEAPAPPPLALRDSFGV*SSLPRT Trigger: GGTGCGGGGCAGTGAACTTCAGACCCCAAAGGAGTC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCATGCTCTGACTCCTTaGGGGTCTGAAGTTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: FFYCLGLEAPAPPPLALRHALTP*GSEVHC Trigger: GCAGTGAACTTCAGACCCCAAAGGAGTCAGAGCATG...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCCACCGCGCCCTGGGGTaGGGGGATCTGGCGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPHRALG*GDLAAV Trigger: CACAGCCGCCAGATCCCCGCACCCCAGGGCGCGGTG...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCGACAGGCCCGGCTGCTaGGGGCTCCCGGAGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSDRPGC*GLPELS Trigger: CGAGAGCTCCGGGAGCCCCCAGCAGCCGGGCCTGTC...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCGTGCCGCCTCCCGCTTaGCGAAGCGCAGGCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPVPPPA*RSAGRR Trigger: CCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCAC...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCCCCGCCCAGCGCTTCTaGCGTGGTTCCCTGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPPAQRF*RGSLVP Trigger: CGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGG...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGTGCACGGCAGGCTCTaGTCCCCGGGGGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRVHGRL*SPGARR Trigger: CCTCCTGGCCCCCGGGGAGCAGAGCCTGCCGTGCAC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCGCCTCAGTCCTGGCCTaGGCAGGAGTCTGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSASVLA*AGVWRS Trigger: GCTCCGCCAGACTCCTGCCCAGGCCAGGACTGAGGC...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTACCAGCACCGCGCCCTaGGGTGCGGGGATCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRTSTAP*GAGIWR Trigger: CCGCCAGATCCCCGCACCCCAGGGCGCGGTGCTGGT...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR TCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCGTCTGGCGGAGCCTCTaGGGTGACGAGACCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPVWRSL*GDETTW Trigger: CCAGGTGGTCTCGTCACCTCAGAGGCTCCGCCAGAC...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCGGCTTGCCTCAGTCCTaGCCTGGGCAGGAGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPGLPQS*PGQESG Trigger: GCCAGACTCCTGCCCAGGCCAGGACTGAGGCAAGCC...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR TCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCGACCACCTGGCTGGGTaGATGTCCAGAGGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPDHLAG*MSRGWA Trigger: TGCCCACCCTCTGGACATTCACCCAGCCAGGTGGTC...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGCGGAGCCTCTGAGGTaGCGAGACCACCTGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRAEPLR*RDHLAG Trigger: CCCAGCCAGGTGGTCTCGTCACCTCAGAGGCTCCGC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTAGGTCCTTCTCCCGCTaGACCAGCACCGCGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRRSFSR*TSTAPW Trigger: CCAGGGCGCGGTGCTGGTGCAGCGGGAGAAGGACCT...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGCCGTGGTTCCCTGGTaGCGCCTCCCGCTTGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRAVVPW*RLPLAE Trigger: TTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCGGGTCTGAAGTTCACTaGCCCGCACCTGCGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPGSEVH*PAPAPS Trigger: TGAGGGCGCAGGTGCGGGGCAGTGAACTTCAGACCC...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCCAGAGGGTGGGCAGCTaGGCTCCCGGTCTCAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPQRVGS*APGLKS Trigger: ACTCTTGAGACCGGGAGCCCAGCTGCCCACCCTCTG...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTTCTGCCGTGGTTCCCTaGTGCCGCCTCCCGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRSAVVP*CRLPLA Trigger: GGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGA...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCAGCGCTTCTGCCGTaGTTCCCTGGTGCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRPALLP*FPGAAS Trigger: GGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGG...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCACGAGACCACCTGGCTaGGTGAATGTCCAGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPTRPPG*VNVQRV Trigger: CACCCTCTGGACATTCACCCAGCCAGGTGGTCTCGT...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCGGTGACGAGACCACCTaGCTGGGTGAATGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSGDETT*LGECPE Trigger: CTCTGGACATTCACCCAGCCAGGTGGTCTCGTCACC...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCTGGCAGTAGCAGCTaGCTTCCTCTCGGTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRPGSSS*LPLGAR Trigger: CCGTGCACCGAGAGGAAGCCAGCTGCTACTGCCAGG...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCTTTATTGCCTCGGGTTaGAAGCTCCAGCGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSFIASG*KLQRPL Trigger: GAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAA...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTAAGTGCCTTGAGGCTTaGCTCAGTCCTGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRKCLEA*LSPGLG Trigger: GCCCAGGCCAGGACTGAGGCAAGCCTCAAGGCACTT...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCCCCAGGGATTCTAGCTaGTGGCCTGTGGGTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: FYCLGLEAPAPPPLALRPPRDSS*WPVGLE Trigger: TTCTAGACCCACAGGCCAGCAGCTAGAATCCCTGGG...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCAATGGCTCCCCAAAGTaGGTGGCACAGAGGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSNGSPK*VAQRKS Trigger: GCTTTTCCTCTGTGCCACCCACTTTGGGGAGCCATT...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTAGGGATTCTAGCTGCTaGCCTGTGGGTCTAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRRDSSC*PVGLEF Trigger: GAATTCTAGACCCACAGGCCAGCAGCTAGAATCCCT...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCAACATTTCTTTTATTaGCTCGGGTTGGAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FFYCLGLEAPAPPPLALRQHFFY*LGLEAP Trigger: TGGAGCTTCCAACCCGAGGCAATAAAAGAAATGTTG...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS CCA 90 bp | CCCCGCACCTGCGCCGCCCCGCCCAGCGCTTCTGCCGTGGTTCCCTaGTGCCGCCTCCCGCTTGCCGAAGCGCAGGCCGAAGGAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PRTCAAPPSASAVVP*CRLPLAEAQAEGVP Trigger: TGGAACTCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGCGCAGGTGCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS GCA 90 bp | CGCACCTGCGCCGCCCCGCCCAGCGCTTCTGCCGTGGTTCCCTGGTaGCGCCTCCCGCTTGCCGAAGCGCAGGCCGAAGGAGTTCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RTCAAPPSASAVVPW*RLPLAEAQAEGVPV Trigger: AACTGGAACTCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGCGCAGGTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS GCA 90 bp | AGCCTGGCAGTAGCAGCTGGCTTCCTCTCGGTGCACGGCAGGCTCTaGTCCCCGGGGGCCAGGAGGCCCAGGGATTCTAGCTGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLAVAAGFLSVHGRL*SPGARRPRDSSCWP Trigger: AGGCCAGCAGCTAGAATCCCTGGGCCTCCTGGCCCCCGGGGAGCAGAGCCTGCCGTGCACCGAGAGGAAGCCAGCTGCTACTGCCAGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367194.5 ENST00000625357.1 |
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| CDS GCA 90 bp | CCCGCCCAGCGCTTCTGCCGTGGTTCCCTGGTGCCGCCTCCCGCTTaGCGAAGCGCAGGCCGAAGGAGTTCCAGTTGTAGTTCGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PAQRFCRGSLVPPPA*RSAGRRSSSCSSAG Trigger: ACCTGCCGAACTACAACTGGAACTCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367194.5 ENST00000625357.1 |
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| CDS-3UTR CAA 90 bp | CTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCGGTGCCGCCTCCCGCTaGCCGAAGCGCAGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLPRVGSSSAPSLSPTSGAASR*PKRRPK Trigger: CTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACC...GGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGGTCCTAGAAGTGCCTaGAGGCTTGCCTCAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FFYCLGLEAPAPPPLALRGPRSA*RLASVL Trigger: CAGGACTGAGGCAAGCCTCAAGGCACTTCTAGGACC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CAA 90 bp | TTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTCCCCATGCTCTGACTCCTTaGGGGTCTGAAGTTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: FYCLGLEAPAPPPLALRPHALTP*GSEVHC Trigger: GCAGTGAACTTCAGACCCCAAAGGAGTCAGAGCATG...GGGACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTTTTTATTGCCTCGGGTaGGAAGCTCCAGCGCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: FFYCLGLEAPAPPPLALRFYCLG*EAPAPP Trigger: AGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAA...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTTATTGCCTCGGGTTGGAAGCTCCAGCGCCCCCTCCCTTAGCCCTACGTGCAACATTTCTTTTATaGCCTCGGGTTGGAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FFYCLGLEAPAPPPLALRATFLL*PRVGSS Trigger: GGAGCTTCCAACCCGAGGCAATAAAAGAAATGTTGC...ACGTAGGGCTAAGGGAGGGGGCGCTGGAGCTTCCAACCCGAGGCAATAAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS CCA 72 bp | CCCGCACCTGCGCCGCCCCGCCCAGCGCTTCTGCCGTaGTTCCCTGGTGCCGCCTCCCGCTTGCCGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PAPAPPRPALLP*FPGAASRLPKR Trigger: GCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGCGCAGGTGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS GCA 72 bp | ACTGCCCCGCACCTGCGCCGCCCCGCCCAGCGCTTCTaGCGTGGTTCCCTGGTGCCGCCTCCCGCTTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: TAPHLRRPAQRF*RGSLVPPPACR Trigger: TCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGCGCAGGTGCGGGGCAGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS GCA 72 bp | GCCGCCCCGCCCAGCGCTTCTGCCGTGGTTCCCTGGTaGCGCCTCCCGCTTGCCGAAGCGCAGGCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAPPSASAVVPW*RLPLAEAQAEG Trigger: TCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS CCA 72 bp | TGCGCCGCCCCGCCCAGCGCTTCTGCCGTGGTTCCCTaGTGCCGCCTCCCGCTTGCCGAAGCGCAGGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: CAAPPSASAVVP*CRLPLAEAQAE Trigger: TTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCGGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625357.1 |
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| CDS GCA 72 bp | TCAGCCCCGCCCAGCGCTTCTGCCGTGGTTCCCTGGTaGCGCCTCCCGCTTGCCGAAGCGCAGGCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SAPPSASAVVPW*RLPLAEAQAEG Trigger: TCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCGCTGGGCGGGGCTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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| CDS CCA 72 bp | CGAGGTCCCCCGACGGCTCAGCCTGGCAGTAGCAGCTaGCTTCCTCTCGGTGCACGGCAGGCTCTGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RGPPTAQPGSSS*LPLGARQALLP Trigger: GGGGAGCAGAGCCTGCCGTGCACCGAGAGGAAGCCAGCTGCTACTGCCAGGCTGAGCCGTCGGGGGACCTCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367194.5 ENST00000625357.1 |
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| CDS GCA 72 bp | GTAGCAGCTGGCTTCCTCTCGGTGCACGGCAGGCTCTaGTCCCCGGGGGCCAGGAGGCCCAGGGATTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: VAAGFLSVHGRL*SPGARRPRDSS Trigger: GCTAGAATCCCTGGGCCTCCTGGCCCCCGGGGAGCAGAGCCTGCCGTGCACCGAGAGGAAGCCAGCTGCTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000367194.5 ENST00000625357.1 |
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| CDS GCA 72 bp | CGCTTCTGCCGTGGTTCCCTGGTGCCGCCTCCCGCTTaGCGAAGCGCAGGCCGAAGGAGTTCCAGTTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RFCRGSLVPPPA*RSAGRRSSSCS Trigger: ACTACAACTGGAACTCCTTCGGCCTGCGCTTCGGCAAGCGGGAGGCGGCACCAGGGAACCACGGCAGAAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367194.5 ENST00000625357.1 |
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| CDS TCA 72 bp | TCAGTCCTGGCCTGGGCAGGAGTCTGGCGGAGCCTCTaGGGTGACGAGACCACCTGGCTGGGTGAATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVLAWAGVWRSL*GDETTWLGECP Trigger: TGGACATTCACCCAGCCAGGTGGTCTCGTCACCTCAGAGGCTCCGCCAGACTCCTGCCCAGGCCAGGACTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367194.5 |
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