RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIRREL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149571

Ensembl transcript IDs: ENST00000525144.7, ENST00000525704.2, ENST00000526519.5, ENST00000526764.1, ENST00000529097.6, ENST00000532647.1, ENST00000533026.6, ENST00000547738.5, ENST00000549874.1

Found 659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGCCCACCTCTGGCACACAGCACCTGGGGACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: PPTSGTQHLGTQICA*SELRRKAVAEALGG
Trigger: GCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR GCA 90 bp TGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTaGCCTGACCTCTTCCCTGGCCCGTCCCCACCCGCGGTGTGTGAT +
Preference number: 1 (lower is better)
Translates to: WCPLQSTPRPWTTRT*PDLFPGPSPPAVCD
Trigger: ATCACACACCGCGGGTGGGGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR GCA 90 bp AGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTCCTCTaGAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACC +
Preference number: 1 (lower is better)
Translates to: RRWEAVLEVANSGVL*KVPLVPGQPERALT
Trigger: GGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp GGAAGTGGCCAATTCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCCCA +
Preference number: 1 (lower is better)
Translates to: GSGQFWCPLQSTPRP*TTRTCPDLFPGPSP
Trigger: TGGGGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp GCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACG +
Preference number: 1 (lower is better)
Translates to: AVAEALGGCPGSGQF*CPLQSTPRPWTTRT
Trigger: CGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp TCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTaGCCAATTCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGAC +
Preference number: 1 (lower is better)
Translates to: SKEGSGRGAGRLSWK*PILVSSAKYPSSLD
Trigger: GTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp AGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTaGAAGTGGCCAATTCTGGTGTCCTCTGCAAAGTACCCCTCGTCC +
Preference number: 1 (lower is better)
Translates to: RASKEGSGRGAGRLS*KWPILVSSAKYPSS
Trigger: GGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp TGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTaGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGT +
Preference number: 1 (lower is better)
Translates to: WGPRFVLDQSFEGRQ*QRRWEAVLEVANSG
Trigger: ACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 90 bp AGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATaGAAGCAGAGTTATAGCTGCCACTTGTGCCTGTGGGCAGAGCAG +
Preference number: 1 (lower is better)
Translates to: RGRAHRETREWTAVS*KQSYSCHLCLWAEQ
Trigger: CTGCTCTGCCCACAGGCACAAGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp TTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTaGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTCCTCTGCAAA +
Preference number: 1 (lower is better)
Translates to: FVLDQSFEGRQWQRR*EAVLEVANSGVLCK
Trigger: TTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 90 bp TGGAGCCTTACTGAAGACAGGATCGCCGTTCTTGTGTTTATCAGCTaGGAAGGGCAGTCTCGCCATCTTAAAGACCTGCCCTCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: WSLTEDRIAVLVFIS*EGQSRHLKDLPSSP
Trigger: GGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGTAAGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 90 bp CAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGGGGGTaGGCTCCCGGCCAGCCTGGTGAGAGAGAGGCTCCTTTAGCCAAG +
Preference number: 1 (lower is better)
Translates to: QNCKSMDTKHQTNWG*APGQPGEREAPLAK
Trigger: CTTGGCTAAAGGAGCCTCTCTCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR GCA 90 bp CGGTCCCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTaGAAGAGTATGGACACAAAACACCAAACAAATTGGGGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: RSHRRVQRHQVQGQN*KSMDTKHQTNWGWA
Trigger: AGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGGGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 90 bp AGTGTTCAGAGAACCCTGACCAGAGAAGCTCCCGCACTTCTTATATaGACTCCGATTGTGCTGAGGGGGAGGGGAGGAGTACACAAAGCA +
Preference number: 1 (lower is better)
Translates to: SVQRTLTREAPALLI*TPIVLRGRGGVHKA
Trigger: TGCTTTGTGTACTCCTCCCCTCCCCCTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTTCTCTGAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 90 bp GGGTTGAGGTGTAGATATACTTCCTCTCTTCTCGTGGAGCCTTACTaGAGACAGGATCGCCGTTCTTGTGTTTATCAGCTGAGAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GLRCRYTSSLLVEPY*RQDRRSCVYQLRRA
Trigger: TGCCCTTCTCAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATCTACACCTCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR GCA 90 bp CAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCTaGCCTGCAGATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCT +
Preference number: 1 (lower is better)
Translates to: QFLTERAMCSIQNAG*PADEVQSSPGQPQP
Trigger: AGGCTGAGGTTGACCTGGACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTaGGTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGC +
Preference number: 1 (lower is better)
Translates to: PLLSRKIESKEGREP*VPNAFYELLGSSCG
Trigger: GCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR TCA 90 bp GAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGTaGCTAGGAGGGTTGAGGTGTAGATATACTTCCTCTCTTCTCGTG +
Preference number: 1 (lower is better)
Translates to: EQTCWSSVPNIYFRW*LGGLRCRYTSSLLV
Trigger: CACGAGAAGAGAGGAAGTATATCTACACCTCAACCCTCCTAGTCACCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR CAA 90 bp GTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTaGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: VQVNLSLAPTLPGAM*PRLTYTDASDPLPA
Trigger: GGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
3UTR CAA 90 bp CCCGCCCACCTCTGGCACACAGCACCTGGGGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PAHLWHTAPGDPDLC*IRASKEGSGRGAGR
Trigger: CCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTACCACCCGCCCACCTCTaGCACACAGCACCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVPPAHL*HTAPGD
Trigger: GTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGGGTGG...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 90 bp TCCCCACCCGCCCACCTCTGGCACACAGCACCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCT +
Preference number: 2 (lower is better)
Translates to: SPPAHLWHTAPGDPD*CLIRASKEGSGRGA
Trigger: AGCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGGGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR TCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACAACCAGAACGTGCCCTaGCCTCTTCCCTGGCCCGTC +
Preference number: 2 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHNQNVP*PLPWPV
Trigger: GACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTT...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR TCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTAACCAGAACGTGCCCTaGCCTCTTCCCTGGCCCGTC +
Preference number: 2 (lower is better)
Translates to: FWSARGRAHRETREWTAVNQNVP*PLPWPV
Trigger: GACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTT...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 90 bp CAGCCTGGTGAGAGAGAGGCTCCTTTAGCCAAGGCCATTTCTGGCTaGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGGGAGCCG +
Preference number: 2 (lower is better)
Translates to: QPGEREAPLAKAISG*SASRVWAMSSSGEP
Trigger: CGGCTCCCCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCTAAAGGAGCCTCTCTCTCACCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCT +
Preference number: 2 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSSTPRP*TTRTCP
Trigger: AGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACT...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACAGTACACCAGGCTCTaGCCGGACCGGTCCCACCGC +
Preference number: 2 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRQYTRL*PDRSHR
Trigger: GCGGTGGGACCGGTCCGGTCAGAGCCTGGTGTACTG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCAATTCTGGTGTCCTCTaGAAAGTACCCCTCGTCCCT +
Preference number: 2 (lower is better)
Translates to: GCPALSTAHSAAASVCLPNSGVL*KVPLVP
Trigger: AGGGACGAGGGGTACTTTGCAGAGGACACCAGAATT...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGTGGACAACCAGAACGTaGCCTGACCTCTTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWWTTRT*PDLFPG
Trigger: GCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCA...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACAGGCTGTCCTGGAAGTaGCCAATTCTGGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHRLSWK*PILVSS
Trigger: AGAGGACACCAGAATTGGCCACTTCCAGGACAGCCT...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGTATAGCTGCCACTTGTaGCTGTGGGCAGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQYSCHL*LWAEQV
Trigger: CACCTGCTCTGCCCACAGGCACAAGTGGCAGCTATA...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGATATAGCTGCCACTTGTaGCTGTGGGCAGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRYSCHL*LWAEQV
Trigger: CACCTGCTCTGCCCACAGGCACAAGTGGCAGCTATA...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCT +
Preference number: 2 (lower is better)
Translates to: GVEPTERPESGPQFHESRSTPRP*TTRTCP
Trigger: AGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACT...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGAGCCAAGGCCATTTCTaGCTTGTCAGCCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQSQGHF*LVSLQG
Trigger: ACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGAAACACCAAACAAATTaGGGGTGGGCTCCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQKHQTN*GWAPGQ
Trigger: CTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGCACACCCGGCGAGGTaGTCCGTCAGCACAGGCTCC +
Preference number: 2 (lower is better)
Translates to: PLLSRKIESKEGREPWVPAHPAR*SVSTGS
Trigger: GGAGCCTGTGCTGACGGAGCACCTCGCCGGGTGTGC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACAAACAAATTGGGGGTaGGCTCCCGGCCAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRQTNWG*APGQPG
Trigger: ACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR TCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVTQICA*SELRRK
Trigger: CTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAAGCAGAGTTATAGCTaGCACTTGTGCCTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVKQSYS*HLCLWA
Trigger: TGCCCACAGGCACAAGTGGCAGCTATAACTCTGCTT...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAGCTGGGAGGCTGTCCTaGAAGTGGCCAATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRAGRLS*KWPILV
Trigger: CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGC...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR TCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQTQICA*SELRRK
Trigger: CTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTCTGGGGCAGCTCAGTaGTGGGAAGACGTCATCCCC +
Preference number: 2 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLSGAAQ*WEDVIP
Trigger: GGGGATGACGTCTTCCCAGCACTGAGCTGCCCCAGA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACC +
Preference number: 2 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWGSGQF*CPLQST
Trigger: GGTACTTTGCAGAGGACACCAGAATTGGCCACTTCC...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAAGCCAAGGCCATTTCTaGCTTGTCAGCCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRSQGHF*LVSLQG
Trigger: ACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCT...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 90 bp TTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTaGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACC +
Preference number: 2 (lower is better)
Translates to: FLSSRGALLKTGSPF*CLSAEKGSLAILKT
Trigger: GGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTGGGGACCCAGATTTGTaGTTGATCAGAGCTTCGAAG +
Preference number: 2 (lower is better)
Translates to: ERPESGPQFHESRVIAATGDPDL*LIRASK
Trigger: CTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCC...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp AATCAAAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTTGGCTTCCTCTCTTCTCGTaGAGCCTTACTGAAGACAGG +
Preference number: 2 (lower is better)
Translates to: NQRRAENLGFPTHSMSSWLPLFS*SLTEDR
Trigger: CCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAG...CCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR CCA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACC +
Preference number: 2 (lower is better)
Translates to: SAASSPRTELQEYGHKTPGSGQF*CPLQST
Trigger: GGTACTTTGCAGAGGACACCAGAATTGGCCACTTCC...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTCAGTGGCAGAGGCGCTaGGAGGCTGTCCTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIQWQRR*EAVLEV
Trigger: CACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTG...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp CTTTCTGTACAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCGCTCACATACACCGATaGATCAGACCCACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: LSVQFLTERAMCSIQNAGAHIHR*IRPTPC
Trigger: GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGC...GCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTGTACAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
3UTR CAA 90 bp AAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTaGGGTTCTTCCTGTGGCTTTGTAGGAACAAAAGAACAGAACAAA +
Preference number: 2 (lower is better)
Translates to: KEGREPWVPNAFYEL*GSSCGFVGTKEQNK
Trigger: TTTGTTCTGTTCTTTTGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR TCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCCGCACTTCTTATATaGACTCCGATTGTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFPALLI*TPIVLR
Trigger: CCTCAGCACAATCGGAGTTCATATAAGAAGTGCGGG...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR GCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCAAGCAGAGTTATAGCTaGCACTTGTGCCTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFKQSYS*HLCLWA
Trigger: TGCCCACAGGCACAAGTGGCAGCTATAACTCTGCTT...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTCTGGCACACAGCACCTaGGGACCCAGATTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: IKSKDRTARVWTQNTKQILAHST*GPRFVL
Trigger: AAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAG...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGAGAACTGCAAGAGTATaGACACAAAACACCAAACAA +
Preference number: 2 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAERTARV*TQNTKQ
Trigger: TTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCT...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR GCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGAATTCTGGTGTCCTCTaGAAAGTACCCCTCGTCCCT +
Preference number: 2 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWNSGVL*KVPLVP
Trigger: AGGGACGAGGGGTACTTTGCAGAGGACACCAGAATT...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR CCA 72 bp GAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACA +
Preference number: 3 (lower is better)
Translates to: EALGGCPGSGQF*CPLQSTPRPWT
Trigger: TGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 72 bp GCCAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATaGGCTATGAGCAGCAGTGGGGAGCCGGGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: AKAISGLSASRV*AMSSSGEPGFL
Trigger: CAGAAACCCCGGCTCCCCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp TCTGGCACACAGCACCTGGGGACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCG +
Preference number: 3 (lower is better)
Translates to: SGTQHLGTQICA*SELRRKAVAEA
Trigger: CGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 72 bp CAATTCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCTGACCTCTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: QFWCPLQSTPRP*TTRTCPDLFPG
Trigger: GCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CAA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGAAGGCCATTTCTGGCTaGTCAGCCTCCAGGGTATGG +
Preference number: 3 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQKAISG*SASRVW
Trigger: CCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 72 bp AAGAGTATGGACACAAAACACCAAACAAATTGGGGGTaGGCTCCCGGCCAGCCTGGTGAGAGAGAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: KSMDTKHQTNWG*APGQPGEREAP
Trigger: AGGAGCCTCTCTCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CAA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAAAAACACCAAACAAATaGGGGGTGGGCTCCCGGCCA +
Preference number: 3 (lower is better)
Translates to: PPQSSAASSPRTELQEYGKTPNK*GVGSRP
Trigger: TGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTT...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp GCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATaGAAGCAGAGTTATAGCTGCCACTTGTGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: AHRETREWTAVS*KQSYSCHLCLW
Trigger: CCACAGGCACAAGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp AGAACCCTGACCAGAGAAGCTCCCGCACTTCTTATATaGACTCCGATTGTGCTGAGGGGGAGGGGAGGAGTA +
Preference number: 3 (lower is better)
Translates to: RTLTREAPALLI*TPIVLRGRGGV
Trigger: TACTCCTCCCCTCCCCCTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CAA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAA +
Preference number: 3 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVDPDLC*IRASKE
Trigger: TTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTC...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR-3UTR CAA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQDPDLC*IRASKE
Trigger: TTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTC...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp GGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATaGGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAAC +
Preference number: 3 (lower is better)
Translates to: GGQRTLGSQRIL*ALGFFLWLCRN
Trigger: GTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR CAA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCG +
Preference number: 3 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLPGDPD*CLIRAS
Trigger: CGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp ACTGAAGACAGGATCGCCGTTCTTGTGTTTATCAGCTaGGAAGGGCAGTCTCGCCATCTTAAAGACCTGCCC +
Preference number: 3 (lower is better)
Translates to: TEDRIAVLVFIS*EGQSRHLKDLP
Trigger: GGGCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR GCA 72 bp CGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTaGAAGAGTATGGACACAAAACACCAAACAAATTGG +
Preference number: 3 (lower is better)
Translates to: RRVQRHQVQGQN*KSMDTKHQTNW
Trigger: CCAATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CCA 72 bp TCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTaGGTTCCCAACGCATTCTATGAGCTCTTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: SRKIESKEGREP*VPNAFYELLGS
Trigger: AGAACCCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR-3UTR CAA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTCCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCG +
Preference number: 3 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIPGDPD*CLIRAS
Trigger: CGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGG...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp TGTAGATATACTTCCTCTCTTCTCGTGGAGCCTTACTaGAGACAGGATCGCCGTTCTTGTGTTTATCAGCTG +
Preference number: 3 (lower is better)
Translates to: CRYTSSLLVEPY*RQDRRSCVYQL
Trigger: CAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR TCA 72 bp TGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGTaGCTAGGAGGGTTGAGGTGTAGATATACTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CWSSVPNIYFRW*LGGLRCRYTSS
Trigger: AGAGGAAGTATATCTACACCTCAACCCTCCTAGTCACCACCTGAAATAAATGTTAGGGACACTACTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGGCGGCACCAGGACTGTaGGGCGTGCGGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMAAPGL*GVRGGS
Trigger: GCTCCCGCCCCGCACGCCTCACAGTCCTGGTGCCGC...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCCAGTACACCAGGCTCTaGCCGGACCGGTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALQYTRL*PDRSHR
Trigger: GCGGTGGGACCGGTCCGGTCAGAGCCTGGTGTACTG...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCCTTGGCGGCTCTCGGTaGTCAGCCTCCGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLLGGSR*SASAGP
Trigger: AGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAG...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTCCAGGACCAGGCGATaGGGTCCGGCGGCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVSRTRR*GPAAAC
Trigger: GCACGCCGCCGCCGGACCGCATCGCCTGGTCCTGGA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCGCGGCCTGGATGGCCTaGCACTCGTACACCGCATCG +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLAAWMA*HSYTAS
Trigger: CGATGCGGTGTACGAGTGCCAGGCCATCCAGGCCGC...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCCCGTGGAGGGCGTGCTaGGTCTGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLPWRAC*VWVLEM
Trigger: CATCTCCAGCACCCAGACCCAGCACGCCCTCCACGG...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCGGACGCAGGTCGGGCTaGCAGCTGGAGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALGRRSG*QLEREM
Trigger: CATCTCCCTCTCCAGCTGCCAGCCCGACCTGCGTCC...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGGCGGCACCAGGACTGTaGGGCGTGCGGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQAAPGL*GVRGGS
Trigger: GCTCCCGCCCCGCACGCCTCACAGTCCTGGTGCCGC...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTGCTCCACCGAGAGGTTaGCCAGTGGAGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGQPQPSAHSARRHVAQAAPPRG*PVEGAG
Trigger: TCCAGCACCCTCCACTGGTCAACCTCTCGGTGGAGC...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTCAGGACTGTGAGGCGTaGGGGGCGGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSQDCEA*GAGADG
Trigger: GCCATCCGCTCCCGCCCCGCACGCCTCACAGTCCTG...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGGATGGCGGCCTGGATaGCCTGGCACTCGTACACCG +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPGWRPG*PGTRTP
Trigger: CGGTGTACGAGTGCCAGGCCATCCAGGCCGCCATCC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTGGCCCTTCTCGCCGTaGAGGGCGTGCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVWPFSP*RACWVW
Trigger: CCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCATGGCCCTTCTCGCCGTaGAGGGCGTGCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASWPFSP*RACWVW
Trigger: CCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCA...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAGGTGGTGCTCCCCTaGCAGGTGGTTCCCTACCAC +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGQVVLP*QVVPYH
Trigger: GTGGTAGGGAACCACCTGTCAGGGGAGCACCACCTG...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGCGGCACCAGGACTGTaGGGCGTGCGGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRAAPGL*GVRGGS
Trigger: GCTCCCGCCCCGCACGCCTCACAGTCCTGGTGCCGC...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCGTCAACCGTGCGGCTaGGGTTGGTGCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCRQPCG*GWCCPG
Trigger: CCCTGGGCAGCACCAACCTCAGCCGCACGGTTGACG...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCGCCCTCCTCGGTGCTaGTGGTCTCCACCGTATAGC +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGRPPRC*WSPPYS
Trigger: GCTATACGGTGGAGACCATCAGCACCGAGGAGGGCG...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTACAGGACTGTGAGGCGTaGGGGGCGGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVQDCEA*GAGADG
Trigger: GCCATCCGCTCCCGCCCCGCACGCCTCACAGTCCTG...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCCGATGCTCTCCCGCTTaGCGTCCCGAAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPRCSPA*RPEAGS
Trigger: AGACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCG...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCCGATGCTCTCCCGCTTaGCGTCCCGAAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPRCSPA*RPEAGS
Trigger: AGACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCG...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGTCCAGGACCAGGCGATaGGGTCCGGCGGCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARSRTRR*GPAAAC
Trigger: GCACGCCGCCGCCGGACCGCATCGCCTGGTCCTGGA...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCGCTCGATGGACGAGCTaGCCATGCCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSARWTS*PCPAQT
Trigger: GGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGC...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTTGCCAGGCGCCATGTTaGCCAGGCTCACATACACCG +
Preference number: 4 (lower is better)
Translates to: PGQPQPSAHSARRHVAQACQAPC*PGSHTP
Trigger: CGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCA...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGGATGGCGGCCTGGATaGCCTGGCACTCGTACACCG +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDGWRPG*PGTRTP
Trigger: CGGTGTACGAGTGCCAGGCCATCCAGGCCGCCATCC...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACGTTGTCCTCCAGCACTaGCTGTGGCTCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHVVLQH*LWLHRE
Trigger: CTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAAC...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCGACGATGGTCAGGGATaGGTTGCCGGTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPDDGQG*VAGPGA
Trigger: TGCGCCTGGACCGGCAACCCATCCCTGACCATCGTC...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCTTGCCCGCGTCCTCCTaGCGCACGGATTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGLPASS*RTDLRV
Trigger: GACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAA...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTTGGCCCTTCTCGCCGTaGAGGGCGTGCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSWPFSP*RACWVW
Trigger: CCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCA...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGCTGCAGGGGTCGACTaGGGTCAGAGTTCTGGGACG +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPAAGVD*GQSSGT
Trigger: CGTCCCAGAACTCTGACCCCAGTCGACCCCTGCAGC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCCCACCTGTACTGGGTaGCAGCTGGGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTPTCTG*QLGWPL
Trigger: CAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCACGGTCCAGGCGCAGCTaGAGATGGCATCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASRSRRS*RWHQSP
Trigger: TGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCG...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCCTGGCGCACGGATTTaGGGGTCAGGGTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PGQPQPSAHSARRHVAQAPGARI*GSGSSH
Trigger: ATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGG...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCAGGACTGTGAGGCGTaGGGGGCGGGAGCGGATGGC +
Preference number: 4 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARQDCEA*GAGADG
Trigger: GCCATCCGCTCCCGCCCCGCACGCCTCACAGTCCTG...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCTGGACAACCAGAACGTaGCCTGACCTCTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSWTTRT*PDLFPG
Trigger: GCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCA...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGGCACACCCGGCGAGGTaGTCCGTCAGCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGVLCKVPLVPGQPERALAHPAR*SVSTGS
Trigger: GGAGCCTGTGCTGACGGAGCACCTCGCCGGGTGTGC...CAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCCGGGGATGGCTTTGTTaGTGGCACGACACACGATGC +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLRGWLC*WHDTRC
Trigger: GCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCG...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCCCTTTCCTCCGGGGATaGCTTTGTTGGTGGCACGAC +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSPFLRG*LCWWHD
Trigger: GTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGG...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACCCTTTCCTCCGGGGATaGCTTTGTTGGTGGCACGAC +
Preference number: 4 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHPFLRG*LCWWHD
Trigger: GTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGG...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCTCCAGCACTGGCTGTaGCTCCACCGAGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTLQHWL*LHREVD
Trigger: GTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTGCTGCCCAGGGCGTTaGTCACCTCACAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVCCPGR*SPHRRR
Trigger: CCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATTTGCCCGCGTCCTCCTaGCGCACGGATTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDLPASS*RTDLRV
Trigger: GACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAA...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTCCGTGGAGGGCGTGCTaGGTCTGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSPWRAC*VWVLEM
Trigger: CATCTCCAGCACCCAGACCCAGCACGCCCTCCACGG...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCAGCTGGAGAGGGAGATaGTCGGGGTTGAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALSWRGR*SGLSGA
Trigger: AGCACCACTCAACCCCGACCATCTCCCTCTCCAGCT...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCCTGGGGTCAGAGTTCTaGGACGAGGACTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPLGSEF*DEDWEW
Trigger: CCACTCCCAGTCCTCGTCCCAGAACTCTGACCCCAG...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALSTPRP*TTRTCP
Trigger: AGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACT...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCTCAGCCTCCAGGGTATaGGCTATGAGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALSASRV*AMSSSG
Trigger: CCCACTGCTGCTCATAGCCCATACCCTGGAGGCTGA...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGTACTGTGGGTAACTTaGGAGGTCCCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPVLWVT*EVPAHT
Trigger: GGTGTGGGCAGGGACCTCTCAAGTTACCCACAGTAC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCAGGTGGTGCTCCCCTaGCAGGTGGTTCCCTACCAC +
Preference number: 4 (lower is better)
Translates to: QAPCCPGSHTPMHQTHSLQVVLP*QVVPYH
Trigger: GTGGTAGGGAACCACCTGTCAGGGGAGCACCACCTG...CAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACGCTGGATGTCAATGGTaGCCGACGTCTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHAGCQW*PTSPFL
Trigger: GAGGAAAGGAGACGTCGGTCACCATTGACATCCAGC...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGCTCCACCGAGAGGTTaGCCAGTGGAGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSAPPRG*PVEGAG
Trigger: TCCAGCACCCTCCACTGGTCAACCTCTCGGTGGAGC...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCAGAGCAGTGGAAAGTaGCGACGTTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGQPQPSAHSARRHVAQAQSSGK*RRCPPA
Trigger: TGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTG...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCTCCCCCACAGCTGTGTaGGTGACCTGCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLSPTAV*VTCFSG
Trigger: ACCAGAAAAGCAGGTCACTCACACAGCTGTGGGGGA...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCTACACCGCATCGTCTTaGAGCTCTGCCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLYTASS*SSALRI
Trigger: GATCCTGAGGGCAGAGCTGCAAGACGATGCGGTGTA...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCTGGCACGACACACGATaGTCTGGCCATTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALWHDTR*SGHSPR
Trigger: ACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCA...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACCCGGCACACGTACTTaGCCGCGTCCTCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRPGTRT*PRPPGA
Trigger: TGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGCCCGGCACACGTACTTaGCCGCGTCCTCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQPGTRT*PRPPGA
Trigger: TGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGG...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PGQPQPSAHSARRHVAQAERHDG*HKDEEG
Trigger: GCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTC...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCTGCTTGATGGTGGAGTaGTCCTCACCCTCCCGACCA +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPCLMVE*SSPSRP
Trigger: TGGTCGGGAGGGTGAGGAGCACTCCACCATCAAGCA...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTGTCTGCATCCGCCGCTaGAGGGGTCGACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVVCIRR*RGRLGS
Trigger: TGACCCCAGTCGACCCCTGCAGCGGCGGATGCAGAC...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTCTGGGGCAGCTCAGTaGTGGGAAGACGTCATCCCC +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVSGAAQ*WEDVIP
Trigger: GGGGATGACGTCTTCCCAGCACTGAGCTGCCCCAGA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCCGACACACGATGCTCTaGCCATTCTCCACGTCACCA +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALRHTML*PFSTSP
Trigger: TGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCG...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCGTACTGGGTGACAGCTaGGTTGGCCTTTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSVLGDS*VGLCRA
Trigger: TGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTAC...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCATTGGCCCACCTGTACTaGGTGACAGCTGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASLAHLY*VTAGLA
Trigger: GGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAA...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGGCCTCCTTGATGATCTaGCCCCGCTTGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: QAPCCPGSHTPMHQTHSLASLMI*PRLAHL
Trigger: CAGGTGGGCCAAGCGGGGCCAGATCATCAAGGAGGC...CAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCTGCTGCCCAGGGCGTTaGTCACCTCACAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCCCPGR*SPHRRR
Trigger: CCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCA...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTCCGTGGAGGGCGTGCTaGGTCTGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSPWRAC*VWVLEM
Trigger: CATCTCCAGCACCCAGACCCAGCACGCCCTCCACGG...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGGGGGCAGCTCAGTGCTaGGAAGACGTCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVGAAQC*EDVIPF
Trigger: GAAGGGGATGACGTCTTCCCAGCACTGAGCTGCCCC...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCCATTCTCTGGCTCTTaGCATCCCAGGCACACGGCT +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTPFSGS*HPRHTA
Trigger: AGCCGTGTGCCTGGGATGCCAAGAGCCAGAGAATGG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATCCTTTCGCAACCAGATaGTGGAGGCTGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDPFATR*WRLQAW
Trigger: CCAAGCCTGCAGCCTCCATCATCTGGTTGCGAAAGG...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGCCTTTCGCAACCAGATaGTGGAGGCTGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVPFATR*WRLQAW
Trigger: CCAAGCCTGCAGCCTCCATCATCTGGTTGCGAAAGG...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGATCTTCAGGTGGTaGTCCCCTGACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPRIFRW*SPDRWF
Trigger: GAACCACCTGTCAGGGGAGCACCACCTGAAGATCCT...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCATCGTCTTGCAGCTCTaGCCTCAGGATCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLIVLQL*PQDLQV
Trigger: CACCTGAAGATCCTGAGGGCAGAGCTGCAAGACGAT...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCAGGCTTGGCATTGTCTaGGTGGCAGGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTRLGIV*VAGEVE
Trigger: CTCAACCTCACCTGCCACGCAGACAATGCCAAGCCT...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCAGGCTTGGCATTGTCTaGGTGGCAGGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGRLGIV*VAGEVE
Trigger: CTCAACCTCACCTGCCACGCAGACAATGCCAAGCCT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCCCAGATGATGGAGGCTaGAGGCTTGGCATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPPDDGG*RLGIVC
Trigger: GCAGACAATGCCAAGCCTGCAGCCTCCATCATCTGG...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTCGATGCTCTCCCGCTTaGCGTCCCGAAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVRCSPA*RPEAGS
Trigger: AGACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCG...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACAGCTGGGTTGGCCTTTaGAGAGCAGTGGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHSWVGL*RAVESD
Trigger: GTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCT...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCGTACACCTCTCCAGATaGCTCCTTGATGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLVHLSR*LLDDLA
Trigger: GGCCAGATCATCAAGGAGGCATCTGGAGAGGTGTAC...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATCAGGGTCTTCTCATTaGTCAGGACCACTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VNLSLAPTLPGAMLPRLTSGSSH*SGPLRS
Trigger: GCTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGA...TGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGACGCTGCTGTCACACTaGGTGTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVTLLSH*VSRKEL
Trigger: CAGCTCCTTCCTGGACACGCAGTGTGACAGCAGCGT...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGGTCTGCATCCGCCGCTaGAGGGGTCGACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVVCIRR*RGRLGS
Trigger: TGACCCCAGTCGACCCCTGCAGCGGCGGATGCAGAC...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGCACTCCTGCTTACTTaGTCTCCGGGGCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASALLLT*SPGQPK
Trigger: CTTAGGCTGCCCCGGAGAGCAAGTAAGCAGGAGTGC...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCACCAGTGGAGGGTGCTaGATGTCAATGGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGTSGGC*MSMVTD
Trigger: GTCGGTCACCATTGACATCCAGCACCCTCCACTGGT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTCTCCAGCACTGGCTGTaGCTCCACCGAGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSLQHWL*LHREVD
Trigger: GTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAG...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTGCCTCCTTGATGATCTaGCCCCGCTTGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSASLMI*PRLAHL
Trigger: CAGGTGGGCCAAGCGGGGCCAGATCATCAAGGAGGC...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCTCCACGAGCAAGGATTaGGGTTCTGTGGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTSTSKD*GSVVIR
Trigger: CCGGATGACCACAGAACCCCAATCCTTGCTCGTGGA...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTCAGTGGCAGAGGCGCTaGGAGGCTGTCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSQWQRR*EAVLEV
Trigger: CACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTG...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCTGGCACACAGCACCTaGGGACCCAGATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGLAHST*GPRFVL
Trigger: AAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAG...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 72 bp AACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTaGCCCAGGCTCACATACACCGATGCATCAGACCCA +
Preference number: 4 (lower is better)
Translates to: NLSLAPTLPGAM*PRLTYTDASDP
Trigger: TGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGAGCCAAGCCGTCCTTaGTCCACAGAACGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASEPSRP*STERSH
Trigger: ATGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTC...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCGTACTGTGGGTAACTTaGGAGGTCCCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCVLWVT*EVPAHT
Trigger: GGTGTGGGCAGGGACCTCTCAAGTTACCCACAGTAC...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATACAGGAGACGGGCTCTaGGAAGTACGTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDTGDGL*EVRVVH
Trigger: GTGGACTACACGTACTTCTCAGAGCCCGTCTCCTGT...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGCGGTCCAGGCGCAGCTaGAGATGGCATCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWRSRRS*RWHQSP
Trigger: TGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCG...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGGGAGATGGTCGGGGTTaGGTGGTGCTCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVGDGRG*VVLFEG
Trigger: ACCTTCAAAGAGCACCACTCAACCCCGACCATCTCC...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTCCCACCCGCGGTGTGTaGTCCTTAGACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSPTRGV*SLDVSL
Trigger: CAGACTCACGTCTAAGGATCACACACCGCGGGTGGG...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTCCCACCCGCGGTGTGTaGTCCTTAGACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVPTRGV*SLDVSL
Trigger: CAGACTCACGTCTAAGGATCACACACCGCGGGTGGG...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCAACCAGAACGTGCCCTaGCCTCTTCCCTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRNQNVP*PLPWPV
Trigger: GACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTT...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCCCCGCACTTCTTATATaGACTCCGATTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALPALLI*TPIVLR
Trigger: CCTCAGCACAATCGGAGTTCATATAAGAAGTGCGGG...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCCACAGCTGTGTGAGTaGCCTGCTTTTCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTPQLCE*PAFLVR
Trigger: TCTCACCAGAAAAGCAGGTCACTCACACAGCTGTGG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCAGCCGACACAAACTaGCTGTTCTTAGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCPADTN*LFLAAS
Trigger: CGAGGCGGCTAAGAACAGGCAGTTTGTGTCGGCTGG...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGTGCCTCTGGGTATCTaGAGCCAGCCGACACAAACT +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDVPLGI*SQPTQT
Trigger: AGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCAC...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATTATAGCGCCCCGATGTaGCCGACTCCAGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDYSAPM*PTPERS
Trigger: AGAACGTTCTGGAGTCGGGCACATCGGGGCGCTATA...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGCGGTCCATCATCAGCTaGTTGATGGTGGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVRSIIS*LMVECS
Trigger: GGAGCACTCCACCATCAAGCAGCTGATGATGGACCG...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCTTCAGGACTGAGTCTTaGTGGAATTCACCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGFRTES*WNSPRS
Trigger: GGACCGGGGTGAATTCCAGCAAGACTCAGTCCTGAA...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGATGGGCACACGCTGCTTaGCCGCAGGACGCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGWAHAA*PQDAGR
Trigger: CCGACCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCA...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCAGGAAGCAGAAGCCTTaGTGGCCTTGTCGAACTGCA +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGRKQKP*WPCRTA
Trigger: TGCAGTTCGACAAGGCCAGCAAGGCTTCTGCTTCCT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTATAGCTGCCACTTGTaGCTGTGGGCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVYSCHL*LWAEQV
Trigger: CACCTGCTCTGCCCACAGGCACAAGTGGCAGCTATA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCAGGACCCCTGTTCATTaGACTCCTGCTTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLRTPVH*TPAYLL
Trigger: GAGCAAGTAAGCAGGAGTGCAATGAACAGGGGTCCT...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VNLSLAPTLPGAMLPRLTSETCP*PCSPAP
Trigger: TGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGA...TGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCTGCTCCCCTGACAGGTaGTTCCCTACCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCCSPDR*FPTTRY
Trigger: GTACCTGGTGGTAGGGAACCACCTGTCAGGGGAGCA...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGGATGGCTTTGTTGGTaGCACGACACACGATGCTCT +
Preference number: 4 (lower is better)
Translates to: GCPALSTAHSAAASVCLPGWLCW*HDTRCS
Trigger: AGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACCGGGGATGGCTTTGTTaGTGGCACGACACACGATGC +
Preference number: 4 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHRGWLC*WHDTRC
Trigger: GCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCG...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCGAGAGGTTGACCAGTaGAGGGTGCTGGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTREVDQ*RVLDVN
Trigger: ATTGACATCCAGCACCCTCCACTGGTCAACCTCTCG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCGACGATGGTCAGGGATaGGTTGCCGGTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRDDGQG*VAGPGA
Trigger: TGCGCCTGGACCGGCAACCCATCCCTGACCATCGTC...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCAAGCAGAAGCCTTGCTaGCCTTGTCGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSKQKPC*PCRTAH
Trigger: ATGTGCAGTTCGACAAGGCCAGCAAGGCTTCTGCTT...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 72 bp GCCCACCTCTGGCACACAGCACCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AHLWHTAPGDPD*CLIRASKEGSG
Trigger: GCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGAGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGACAGGTGGTGCTCCCCTaGCAGGTGGTTCCCTACCAC +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRQVVLP*QVVPYH
Trigger: GTGGTAGGGAACCACCTGTCAGGGGAGCACCACCTG...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGCTCCACCGAGAGGTTaGCCAGTGGAGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRAPPRG*PVEGAG
Trigger: TCCAGCACCCTCCACTGGTCAACCTCTCGGTGGAGC...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACCCACCTGTACTGGGTaGCAGCTGGGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRPTCTG*QLGWPL
Trigger: CAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACGTCAACCGTGCGGCTaGGGTTGGTGCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRRQPCG*GWCCPG
Trigger: CCCTGGGCAGCACCAACCTCAGCCGCACGGTTGACG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCGGTCCAGGCGCAGCTaGAGATGGCATCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWRSRRS*RWHQSP
Trigger: TGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCG...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCTGACACAACACCTTTaGGATTTCTCTGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGLTQHL*DFSGNG
Trigger: CCCGTTCCCAGAGAAATCTCAAAGGTGTTGTGTCAG...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACCCATCATCAGCTGCTTaGTGGTGGAGTGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHPSSAA*WWSAPH
Trigger: GTGAGGAGCACTCCACCATCAAGCAGCTGATGATGG...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACGGAGATGGTCGGGGTTaGGTGGTGCTCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHGDGRG*VVLFEG
Trigger: ACCTTCAAAGAGCACCACTCAACCCCGACCATCTCC...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGTGCTGTAGATGTTGGTaGAGGACATGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVCCRCW*RTCLWA
Trigger: TGCCCACAGGCATGTCCTTCACCAACATCTACAGCA...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTCCAGCCGACACAAACTaGCTGTTCTTAGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVPADTN*LFLAAS
Trigger: CGAGGCGGCTAAGAACAGGCAGTTTGTGTCGGCTGG...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCTTCATTTCCGAACCTTaGTCCTTGAGCCGGATGATC +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSFISEP*SLSRMI
Trigger: GATCATCCGGCTCAAGGAGCAAGGTTCGGAAATGAA...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGGCTCACATACACCGATaGATCAGACCCACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRAHIHR*IRPTPC
Trigger: GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGC...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCACATCGTATTCGGGGATaGCGCAAAGTAGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: APTLPGAMLPRLTYTDASHRIRG*RKVASL
Trigger: CAGTGACGCTACTTTGCGCCATCCCCGAATACGATG...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGCATCGTATTCGGGGATaGCGCAAAGTAGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVHRIRG*RKVASL
Trigger: CAGTGACGCTACTTTGCGCCATCCCCGAATACGATG...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCTTGGCATTGTCTGCGTaGCAGGTGAGGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCLALSA*QVRLRG
Trigger: CCCTCTCAACCTCACCTGCCACGCAGACAATGCCAA...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGCGACACACGATGCTCTaGCCATTCTCCACGTCACCA +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRRHTML*PFSTSP
Trigger: TGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCG...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGACCAGTGGAGGGTGCTaGATGTCAATGGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMTSGGC*MSMVTD
Trigger: GTCGGTCACCATTGACATCCAGCACCCTCCACTGGT...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGCGAGAGGTTGACCAGTaGAGGGTGCTGGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVREVDQ*RVLDVN
Trigger: ATTGACATCCAGCACCCTCCACTGGTCAACCTCTCG...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGGTACTGGGTGACAGCTaGGTTGGCCTTTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QAPCCPGSHTPMHQTHSLVLGDS*VGLCRA
Trigger: TGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTAC...CAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGCCTCCTTGATGATCTaGCCCCGCTTGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRASLMI*PRLAHL
Trigger: CAGGTGGGCCAAGCGGGGCCAGATCATCAAGGAGGC...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGGCTTCATCCAGACGATaGTCAGGGATGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SGVLCKVPLVPGQPERALASSRR*SGMGCR
Trigger: CCGGCAACCCATCCCTGACCATCGTCTGGATGAAGC...CAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCGAGGCTGGTTCCTTGTaGACAATTTCCACTCGGATA +
Preference number: 4 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSEAGSL*TISTRI
Trigger: TATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTC...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAGCTCACAAAGCTCGATaGACGAGCTGCCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVAHKAR*TSCPCP
Trigger: TGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGC...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACCACCCGCCCACCTCTaGCACACAGCACCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRPPAHL*HTAPGD
Trigger: GTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGGGTGG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGGGCTATGAGCAGCAGTaGGGAGCCGGGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWGYEQQ*GAGVSG
Trigger: CCCAGAAACCCCGGCTCCCCACTGCTGCTCATAGCC...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACAAGAAGATCCATTCTCTaGCTCTTGGCATCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VNLSLAPTLPGAMLPRLTRRSIL*LLASQA
Trigger: TGCCTGGGATGCCAAGAGCCAGAGAATGGATCTTCT...TGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTGAGCCAAGCCGTCCTTaGTCCACAGAACGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVEPSRP*STERSH
Trigger: ATGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTC...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAGTACTGTGGGTAACTTaGGAGGTCCCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRVLWVT*EVPAHT
Trigger: GGTGTGGGCAGGGACCTCTCAAGTTACCCACAGTAC...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTACAGGAGACGGGCTCTaGGAAGTACGTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSTGDGL*EVRVVH
Trigger: GTGGACTACACGTACTTCTCAGAGCCCGTCTCCTGT...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGCCTGGCGCACGGATTTaGGGGTCAGGGTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVPGARI*GSGSSH
Trigger: ATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGG...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAAACCAGAACGTGCCCTaGCCTCTTCCCTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGNQNVP*PLPWPV
Trigger: GACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTT...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGTQICA*SELRRK
Trigger: CTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTGCTTCGGTCTCTTTGTaGCTCTGGGTATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVASVSL*LWVSAA
Trigger: GGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGC...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAAGGATCTTCAGGTGGTaGTCCCCTGACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVRIFRW*SPDRWF
Trigger: GAACCACCTGTCAGGGGAGCACCACCTGAAGATCCT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTATACACCGCATCGTCTTaGAGCTCTGCCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVYTASS*SSALRI
Trigger: GATCCTGAGGGCAGAGCTGCAAGACGATGCGGTGTA...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGAGGCTTGGCATTGTCTaGGTGGCAGGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGVLCKVPLVPGQPERALRLGIV*VAGEVE
Trigger: CTCAACCTCACCTGCCACGCAGACAATGCCAAGCCT...CAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGTGCTTGATGGTGGAGTaGTCCTCACCCTCCCGACCA +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQCLMVE*SSPSRP
Trigger: TGGTCGGGAGGGTGAGGAGCACTCCACCATCAAGCA...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCTGGGCACACGCTGCTTaGCCGCAGGACGCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCWAHAA*PQDAGR
Trigger: CCGACCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCA...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTCCTGTGGGCACACGCTaGTTGCCCGCAGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATPVGTR*LPAGRR
Trigger: CCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCACAGG...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGCCTGTGGGCACACGCTaGTTGCCCGCAGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEPVGTR*LPAGRR
Trigger: CCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCACAGG...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGATGGACGAGCTGCCCATaGCCAGCACAAACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGWTSCP*PAQTAA
Trigger: GGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCA...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGACGCTGCTGTCACACTaGGTGTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWTLLSH*VSRKEL
Trigger: CAGCTCCTTCCTGGACACGCAGTGTGACAGCAGCGT...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACAGGAAGCAGAAGCCTTaGTGGCCTTGTCGAACTGCA +
Preference number: 4 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHRKQKP*WPCRTA
Trigger: TGCAGTTCGACAAGGCCAGCAAGGCTTCTGCTTCCT...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGTTAGTTTCTCTTCCTTaGCGGCTCTCGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRLVSLP*RLSVLS
Trigger: GCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAA...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGTGCTCCCCTGACAGGTaGTTCCCTACCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWCSPDR*FPTTRY
Trigger: GTACCTGGTGGTAGGGAACCACCTGTCAGGGGAGCA...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGGGATGGCTTTGTTGGTaGCACGACACACGATGCTCT +
Preference number: 4 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMGWLCW*HDTRCS
Trigger: AGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCC...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGCCTTTCCTCCGGGGATaGCTTTGTTGGTGGCACGAC +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVPFLRG*LCWWHD
Trigger: GTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGG...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGACTCCAGCACTGGCTGTaGCTCCACCGAGAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRLQHWL*LHREVD
Trigger: GTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAG...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGGTTGTCCTCCAGCACTaGCTGTGGCTCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWVVLQH*LWLHRE
Trigger: CTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAAC...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGGCCTTTGCAGAGCAGTaGAAAGTGACGACGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRAFAEQ*KVTTLS
Trigger: GGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGC...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTACGTGTAGTCCACTGTaGTCCTGTACACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSTCSPL*SCTPLQ
Trigger: CTGGAGAGGTGTACAGGACCACAGTGGACTACACGT...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGACGTGTAGTCCACTGTaGTCCTGTACACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMTCSPL*SCTPLQ
Trigger: CTGGAGAGGTGTACAGGACCACAGTGGACTACACGT...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGGCTTCATCCAGACGATaGTCAGGGATGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARASSRR*SGMGCR
Trigger: CCGGCAACCCATCCCTGACCATCGTCTGGATGAAGC...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAATGAAGCACTTGATCTaGCCCTTCTCGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVMKHLI*PFSPWR
Trigger: CCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCAT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCAGCTGGAGAGGGAGATaGTCGGGGTTGAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRSWRGR*SGLSGA
Trigger: AGCACCACTCAACCCCGACCATCTCCCTCTCCAGCT...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGGCTCACAAAGCTCGATaGACGAGCTGCCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQAHKAR*TSCPCP
Trigger: TGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGC...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTAGGCTGTCCTGGAAGTaGCCAATTCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSRLSWK*PILVSS
Trigger: AGAGGACACCAGAATTGGCCACTTCCAGGACAGCCT...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AATCAAAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTTGGCCACCCGCCCACCTCTaGCACACAGCACCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: NQRRAENLGFPTHSMSSWPPAHL*HTAPGD
Trigger: GTCCCCAGGTGCTGTGTGCCAGAGGTGGGCGGGTGG...CCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAAACAAATTGGGGGTaGGCTCCCGGCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWQTNWG*APGQPG
Trigger: ACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTG...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTAAACACCAAACAAATTaGGGGTGGGCTCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSKHQTN*GWAPGQ
Trigger: CTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTT...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
3UTR CAA 72 bp CTCTGGCACACAGCACCTGGGGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LWHTAPGDPDLC*IRASKEGSGRG
Trigger: GCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGTGGAGGCCCAGCTCTTaGCTGAAGAGGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQWRPSS*LKRKKQ
Trigger: CTGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCA...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGCAGAGCAGTGGAAAGTaGCGACGTTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQQSSGK*RRCPPA
Trigger: TGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTG...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCGTCAACCGTGCGGCTaGGGTTGGTGCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLRQPCG*GWCCPG
Trigger: CCCTGGGCAGCACCAACCTCAGCCGCACGGTTGACG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACCATCATCAGCTGCTTaGTGGTGGAGTGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRPSSAA*WWSAPH
Trigger: GTGAGGAGCACTCCACCATCAAGCAGCTGATGATGG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGGCTTGCCGCTGCTGCTaGCGCTGCTGTCACACTGCG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEACRCC*RCCHTA
Trigger: CGCAGTGTGACAGCAGCGTCAGCAGCAGCGGCAAGC...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCAGTACACCAGGCTCTaGCCGGACCGGTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLQYTRL*PDRSHR
Trigger: GCGGTGGGACCGGTCCGGTCAGAGCCTGGTGTACTG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGCTCGTGGAGCCTTACTaGAGACAGGATCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVLVEPY*RQDRRS
Trigger: AGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAG...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTACACCGCATCGTCTTaGAGCTCTGCCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRYTASS*SSALRI
Trigger: GATCCTGAGGGCAGAGCTGCAAGACGATGCGGTGTA...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGCCAGATGATGGAGGCTaGAGGCTTGGCATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWPDDGG*RLGIVC
Trigger: GCAGACAATGCCAAGCCTGCAGCCTCCATCATCTGG...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGTGGCACGACACACGATaGTCTGGCCATTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVWHDTR*SGHSPR
Trigger: ACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCA...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAAGCTGGGTTGGCCTTTaGAGAGCAGTGGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVSWVGL*RAVESD
Trigger: GTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGATCAGGGTCTTCTCATTaGTCAGGACCACTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRSGSSH*SGPLRS
Trigger: GCTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGA...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAGCTCGATGGACGAGCTaGCCATGCCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGARWTS*PCPAQT
Trigger: GGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGC...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTGCACACCCGGCGAGGTaGTCCGTCAGCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLAHPAR*SVSTGS
Trigger: GGAGCCTGTGCTGACGGAGCACCTCGCCGGGTGTGC...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGAAGCAATTCCTTTATTaGTTCCCCACCCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRKQFLY*FPTHSP
Trigger: GGGGGAGTGGGTGGGGAAGCAATAAAGGAATTGCTT...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGACTCAGGATCTTCAGGTaGTGCTCCCCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRLRIFR*CSPDRW
Trigger: CCACCTGTCAGGGGAGCACCACCTGAAGATCCTGAG...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTGCGGCCTGGATGGCCTaGCACTCGTACACCGCATCG +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATAAWMA*HSYTAS
Trigger: CGATGCGGTGTACGAGTGCCAGGCCATCCAGGCCGC...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGCGACACACGATGCTCTaGCCATTCTCCACGTCACCA +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVRHTML*PFSTSP
Trigger: TGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCG...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGATTGGCCCACCTGTACTaGGTGACAGCTGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGLAHLY*VTAGLA
Trigger: GGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAA...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGATGCTGCCCAGGGCGTTaGTCACCTCACAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRCCPGR*SPHRRR
Trigger: CCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCA...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGTCCACGAGCAAGGATTaGGGTTCTGTGGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVSTSKD*GSVVIR
Trigger: CCGGATGACCACAGAACCCCAATCCTTGCTCGTGGA...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGATGAAGCACTTGATCTaGCCCTTCTCGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVMKHLI*PFSPWR
Trigger: CCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCAT...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTGGTCGGGCTGGCAGCTaGAGAGGGAGATGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLGRAGS*RGRWSG
Trigger: CCCCGACCATCTCCCTCTCCAGCTGCCAGCCCGACC...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTGGACGCAGGTCGGGCTaGCAGCTGGAGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATGRRSG*QLEREM
Trigger: CATCTCCCTCTCCAGCTGCCAGCCCGACCTGCGTCC...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTAAGCAGAAGCCTTGCTaGCCTTGTCGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSKQKPC*PCRTAH
Trigger: ATGTGCAGTTCGACAAGGCCAGCAAGGCTTCTGCTT...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTCAGCTGTTTCAGGACTaGGTCTTGCTGGAATTCACC +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVQLFQD*VLLEFT
Trigger: GGTGAATTCCAGCAAGACTCAGTCCTGAAACAGCTG...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCCTTGGCGGCTCTCGGTaGTCAGCCTCCGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPLGGSR*SASAGP
Trigger: AGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAG...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGAGGATCTTCAGGTGGTaGTCCCCTGACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWRIFRW*SPDRWF
Trigger: GAACCACCTGTCAGGGGAGCACCACCTGAAGATCCT...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTCATTTCCGAACCTTaGTCCTTGAGCCGGATGATC +
Preference number: 4 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMFISEP*SLSRMI
Trigger: GATCATCCGGCTCAAGGAGCAAGGTTCGGAAATGAA...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTAATTCTGGTGTCCTCTaGAAAGTACCCCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSNSGVL*KVPLVP
Trigger: AGGGACGAGGGGTACTTTGCAGAGGACACCAGAATT...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGTGGGTCCCTCCGGGTaGCTTCGGTCTCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCVGPSG*LRSLCA
Trigger: GGCACAAAGAGACCGAAGCCACCCGGAGGGACCCAC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCACCATCTGTCCGTCCGTaGGTCCCTCCGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SAASSPRTELQEYGHKTPPSVRP*VPPGGF
Trigger: GAAGCCACCCGGAGGGACCCACGGACGGACAGATGG...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGGGGGTAACTTGGCTGTaGTTAGTTTCTCTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRGVTWL*LVSLPW
Trigger: CCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCC...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGCATCGTATTCGGGGATaGCGCAAAGTAGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWHRIRG*RKVASL
Trigger: CAGTGACGCTACTTTGCGCCATCCCCGAATACGATG...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAGGATGGCGGCCTGGATaGCCTGGCACTCGTACACCG +
Preference number: 4 (lower is better)
Translates to: SAASSPRTELQEYGHKTPGWRPG*PGTRTP
Trigger: CGGTGTACGAGTGCCAGGCCATCCAGGCCGCCATCC...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGTTGGCATTGTCTGCGTaGCAGGTGAGGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWLALSA*QVRLRG
Trigger: CCCTCTCAACCTCACCTGCCACGCAGACAATGCCAA...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACGGGGATGGCTTTGTTaGTGGCACGACACACGATGC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGRGWLC*WHDTRC
Trigger: GCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCG...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGACCAGTGGAGGGTGCTaGATGTCAATGGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWTSGGC*MSMVTD
Trigger: GTCGGTCACCATTGACATCCAGCACCCTCCACTGGT...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCCGAGAGGTTGACCAGTaGAGGGTGCTGGATGTCAAT +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRREVDQ*RVLDVN
Trigger: ATTGACATCCAGCACCCTCCACTGGTCAACCTCTCG...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAGCCTTTGCAGAGCAGTaGAAAGTGACGACGTTGTCC +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRAFAEQ*KVTTLS
Trigger: GGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGC...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGACGTGTAGTCCACTGTaGTCCTGTACACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQTCSPL*SCTPLQ
Trigger: CTGGAGAGGTGTACAGGACCACAGTGGACTACACGT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGATCCACGAGCAAGGATTaGGGTTCTGTGGTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRSTSKD*GSVVIR
Trigger: CCGGATGACCACAGAACCCCAATCCTTGCTCGTGGA...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACTCCCGACCAGAGGCTaGTTCCTTGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRLPTRG*FLVDNF
Trigger: GAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGGTCGGGCTGGCAGCTaGAGAGGGAGATGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPGRAGS*RGRWSG
Trigger: CCCCGACCATCTCCCTCTCCAGCTGCCAGCCCGACC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACTGGGGTCAGAGTTCTaGGACGAGGACTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRLGSEF*DEDWEW
Trigger: CCACTCCCAGTCCTCGTCCCAGAACTCTGACCCCAG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGGCTGCAGGGGTCGACTaGGGTCAGAGTTCTGGGACG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEAAGVD*GQSSGT
Trigger: CGTCCCAGAACTCTGACCCCAGTCGACCCCTGCAGC...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCTGGCACACAGCACCTaGGGACCCAGATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWLAHST*GPRFVL
Trigger: AAGCACAAATCTGGGTCCCCAGGTGCTGTGTGCCAG...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGGCTATGAGCAGCAGTaGGGAGCCGGGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCGYEQQ*GAGVSG
Trigger: CCCAGAAACCCCGGCTCCCCACTGCTGCTCATAGCC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAGAGGGCAGAGAACCTTaGGTTCCCAACGCATTCTAT +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVEGREP*VPNAFY
Trigger: ATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTC...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR CAA 72 bp GAGAGAGAGGCTCCTTTAGCCAAGGCCATTTCTGGCTaGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EREAPLAKAISG*SASRVWAMSSS
Trigger: ACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCTAAAGGAGCCTCTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAGCTGGATGTCAATGGTaGCCGACGTCTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGAGCQW*PTSPFL
Trigger: GAGGAAAGGAGACGTCGGTCACCATTGACATCCAGC...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCCTGACACAACACCTTTaGGATTTCTCTGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRLTQHL*DFSGNG
Trigger: CCCGTTCCCAGAGAAATCTCAAAGGTGTTGTGTCAG...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGCAGCTGTTTCAGGACTaGGTCTTGCTGGAATTCACC +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQQLFQD*VLLEFT
Trigger: GGTGAATTCCAGCAAGACTCAGTCCTGAAACAGCTG...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTGGGTCCTTCAGGTTCTaGAACTCTTTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLCKVPLVPGQPERALTSGSFRF*NSFSSS
Trigger: AGAAGAGGAGAAAGAGTTTCAGAACCTGAAGGACCC...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACCCGCACTTCTTATATaGACTCCGATTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRPALLI*TPIVLR
Trigger: CCTCAGCACAATCGGAGTTCATATAAGAAGTGCGGG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAGTGTTCAGAGAACCCTaGCCAGAGAAGCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRVFREP*PEKLPH
Trigger: GTGCGGGAGCTTCTCTGGTCAGGGTTCTCTGAACAC...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGATCGTCTTGCAGCTCTaGCCTCAGGATCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWIVLQL*PQDLQV
Trigger: CACCTGAAGATCCTGAGGGCAGAGCTGCAAGACGAT...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGATCAGGGTCTTCTCATTaGTCAGGACCACTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGSGSSH*SGPLRS
Trigger: GCTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGA...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGATATAGCGCCCCGATGTaGCCGACTCCAGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGYSAPM*PTPERS
Trigger: AGAACGTTCTGGAGTCGGGCACATCGGGGCGCTATA...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCAATTCTGGTGTCCTCTaGAAAGTACCCCTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRNSGVL*KVPLVP
Trigger: AGGGACGAGGGGTACTTTGCAGAGGACACCAGAATT...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGTTAGTTTCTCTTCCTTaGCGGCTCTCGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWLVSLP*RLSVLS
Trigger: GCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAA...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGGTTGTCCTCCAGCACTaGCTGTGGCTCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEVVLQH*LWLHRE
Trigger: CTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAAC...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACATTGCCCGCGTCCTCCTaGCGCACGGATTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTLPASS*RTDLRV
Trigger: GACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAA...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCCCTTTGAGATTTCTCTaGGAACGGGCACAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRPLRFL*ERAQQN
Trigger: GTTCTGCTGTGCCCGTTCCCAGAGAAATCTCAAAGG...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGACTCCCGACCAGAGGCTaGTTCCTTGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRLPTRG*FLVDNF
Trigger: GAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAG...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAAGGACTGAGTCTTGCTaGAATTCACCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRRTESC*NSPRSI
Trigger: GATGGACCGGGGTGAATTCCAGCAAGACTCAGTCCT...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRGSGQF*CPLQST
Trigger: GGTACTTTGCAGAGGACACCAGAATTGGCCACTTCC...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAAGGCTGTCCTGGAAGTaGCCAATTCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GVEPTERPESGPQFHESRRLSWK*PILVSS
Trigger: AGAGGACACCAGAATTGGCCACTTCCAGGACAGCCT...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAACAGGAGACGGGCTCTaGGAAGTACGTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRTGDGL*EVRVVH
Trigger: GTGGACTACACGTACTTCTCAGAGCCCGTCTCCTGT...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AATCAAAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTTGGCCTGGCGCACGGATTTaGGGGTCAGGGTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NQRRAENLGFPTHSMSSWPGARI*GSGSSH
Trigger: ATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGG...CCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCCGCCCTCCTCGGTGCTaGTGGTCTCCACCGTATAGC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPRPPRC*WSPPYS
Trigger: GCTATACGGTGGAGACCATCAGCACCGAGGAGGGCG...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCCGCCCTCCTCGGTGCTaGTGGTCTCCACCGTATAGC +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVRPPRC*WSPPYS
Trigger: GCTATACGGTGGAGACCATCAGCACCGAGGAGGGCG...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGGGGTCCTTCAGGTTCTaGAACTCTTTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVGSFRF*NSFSSS
Trigger: AGAAGAGGAGAAAGAGTTTCAGAACCTGAAGGACCC...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCGCTTGCCGCTGCTGCTaGCGCTGCTGTCACACTGCG +
Preference number: 4 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFACRCC*RCCHTA
Trigger: CGCAGTGTGACAGCAGCGTCAGCAGCAGCGGCAAGC...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAATTTATTTCAGGTGGTaGCTAGGAGGGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVIYFRW*LGGLRC
Trigger: ACACCTCAACCCTCCTAGTCACCACCTGAAATAAAT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACCAGATGATGGAGGCTaGAGGCTTGGCATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRPDDGG*RLGIVC
Trigger: GCAGACAATGCCAAGCCTGCAGCCTCCATCATCTGG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CTTTCTGTACAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCCCCGGCACACGTACTTaGCCGCGTCCTCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LSVQFLTERAMCSIQNAGPGTRT*PRPPGA
Trigger: TGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGG...GCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTGTACAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCATCTGGGGCAGCTCAGTaGTGGGAAGACGTCATCCCC +
Preference number: 4 (lower is better)
Translates to: SAASSPRTELQEYGHKTPSGAAQ*WEDVIP
Trigger: GGGGATGACGTCTTCCCAGCACTGAGCTGCCCCAGA...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGATCCAAAATGCTGGCTaGCCTGCAGATGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARIQNAG*PADEVQ
Trigger: CTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGAT...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCGTGGGTCCCTCCGGGTaGCTTCGGTCTCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVVGPSG*LRSLCA
Trigger: GGCACAAAGAGACCGAAGCCACCCGGAGGGACCCAC...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAGCCTTTGCAGAGCAGTaGAAAGTGACGACGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PPQSSAASSPRTELQEYGAFAEQ*KVTTLS
Trigger: GGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGC...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTTGGCCCACCTGTACTaGGTGACAGCTGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLLAHLY*VTAGLA
Trigger: GGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCAGTACCCCTCGTCCCTaGACAACCAGAACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCSTPRP*TTRTCP
Trigger: AGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACT...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGTCAGCCTCCAGGGTATaGGCTATGAGCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAESASRV*AMSSSG
Trigger: CCCACTGCTGCTCATAGCCCATACCCTGGAGGCTGA...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCAGAACTGCAAGAGTATaGACACAAAACACCAAACAA +
Preference number: 4 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGRTARV*TQNTKQ
Trigger: TTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTCATTCTATGAGCTCTTaGGTTCTTCCTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FWSARGRAHRETREWTAVHSMSS*VLPVAL
Trigger: CAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATG...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
3UTR CAA 72 bp TCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTaGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: SRGALLKTGSPF*CLSAEKGSLAI
Trigger: GATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCCTTTCGCAACCAGATaGTGGAGGCTGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLPFATR*WRLQAW
Trigger: CCAAGCCTGCAGCCTCCATCATCTGGTTGCGAAAGG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTGCTGGATGTCAATGGTaGCCGACGTCTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATAGCQW*PTSPFL
Trigger: GAGGAAAGGAGACGTCGGTCACCATTGACATCCAGC...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCTATAGCGCCCCGATGTaGCCGACTCCAGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCYSAPM*PTPERS
Trigger: AGAACGTTCTGGAGTCGGGCACATCGGGGCGCTATA...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCERHDG*HKDEEG
Trigger: GCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTCGGTCCATCATCAGCTaGTTGATGGTGGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATRSIIS*LMVECS
Trigger: GGAGCACTCCACCATCAAGCAGCTGATGATGGACCG...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCTGGACGAGCTGCCCATaGCCAGCACAAACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFWTSCP*PAQTAA
Trigger: GGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCA...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTGGACAACCAGAACGTaGCCTGACCTCTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLWTTRT*PDLFPG
Trigger: GCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp AATCAAAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTTGGTTGGCATTGTCTGCGTaGCAGGTGAGGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NQRRAENLGFPTHSMSSWLALSA*QVRLRG
Trigger: CCCTCTCAACCTCACCTGCCACGCAGACAATGCCAA...CCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGGAGGCTGGTTCCTTGTaGACAATTTCCACTCGGATA +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWEAGSL*TISTRI
Trigger: TATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTC...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACAGCTGGGAGGCTGTCCTaGAAGTGGCCAATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTAGRLS*KWPILV
Trigger: CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGC...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGGGGCAGCTCAGTGCTaGGAAGACGTCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPGAAQC*EDVIPF
Trigger: GAAGGGGATGACGTCTTCCCAGCACTGAGCTGCCCC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTAGCCAAGGCCATTTCTaGCTTGTCAGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATSQGHF*LVSLQG
Trigger: ACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCT...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTGGAGGCCCAGCTCTTaGCTGAAGAGGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLWRPSS*LKRKKQ
Trigger: CTGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCCACCTGTACTGGGTaGCAGCTGGGTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFPTCTG*QLGWPL
Trigger: CAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGG...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGTGTTCAGAGAACCCTaGCCAGAGAAGCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPVFREP*PEKLPH
Trigger: GTGCGGGAGCTTCTCTGGTCAGGGTTCTCTGAACAC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACTTGTGTTTATCAGCTaGGAAGGGCAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRLVFIS*EGQSRH
Trigger: ATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCTCGTGGAGCCTTACTaGAGACAGGATCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLLVEPY*RQDRRS
Trigger: AGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGATCCCAACGCATTCTATaGGCTCTTGGGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRSQRIL*ALGFFL
Trigger: CAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGA...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAGGGGACCCAGATTTGTaGTTGATCAGAGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRGDPDL*LIRASK
Trigger: CTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCC...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGGTCCAAGGACAGAACTaGAAGAGTATGGACACAAAA +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQVQGQN*KSMDTK
Trigger: TTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGAC...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAGTCCAAGGACAGAACTaGAAGAGTATGGACACAAAA +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRVQGQN*KSMDTK
Trigger: TTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGAC...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCCTCAGGATCTTCAGGTaGTGCTCCCCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVLRIFR*CSPDRW
Trigger: CCACCTGTCAGGGGAGCACCACCTGAAGATCCTGAG...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTGGATGGCTTTGTTGGTaGCACGACACACGATGCTCT +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATGWLCW*HDTRCS
Trigger: AGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCC...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGCTTCATCCAGACGATaGTCAGGGATGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPASSRR*SGMGCR
Trigger: CCGGCAACCCATCCCTGACCATCGTCTGGATGAAGC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTAGGACTGAGTCTTGCTaGAATTCACCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATRTESC*NSPRSI
Trigger: GATGGACCGGGGTGAATTCCAGCAAGACTCAGTCCT...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAATGGTCGGGGTTGAGTaGTGCTCTTTGAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRMVGVE*CSLKVL
Trigger: CAACACCTTCAAAGAGCACCACTCAACCCCGACCAT...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTAGCCAAGGCCATTTCTaGCTTGTCAGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLSQGHF*LVSLQG
Trigger: ACCCTGGAGGCTGACAAGCCAGAAATGGCCTTGGCT...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTAGAACTGCAAGAGTATaGACACAAAACACCAAACAA +
Preference number: 4 (lower is better)
Translates to: EGRQWQRRWEAVLEVANSRTARV*TQNTKQ
Trigger: TTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCT...AGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGACTTGGGTTCTTCCTGTaGCTTTGTAGGAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRLGFFL*LCRNKR
Trigger: TCTTTTGTTCCTACAAAGCCACAGGAAGAACCCAAG...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCCCTCCCGTACTTCTCTaGGAACGGGCACAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVPPVLL*ERAQQN
Trigger: GTTCTGCTGTGCCCGTTCCCAGAGAAGTACGGGAGG...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACATGCTGTAGATGTTGGTaGAGGACATGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTCCRCW*RTCLWA
Trigger: TGCCCACAGGCATGTCCTTCACCAACATCTACAGCA...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGCTTGTGTTTATCAGCTaGGAAGGGCAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAELVFIS*EGQSRH
Trigger: ATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAG...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGTTTCTGTACAGTTCCTaGCTGAAAGAGCTATGTGTT +
Preference number: 4 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARFLYSS*LKELCV
Trigger: AACACATAGCTCTTTCAGTCAGGAACTGTACAGAAA...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCTGGCACGACACACGATaGTCTGGCCATTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVWHDTR*SGHSPR
Trigger: ACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCA...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTAGCTGGGTTGGCCTTTaGAGAGCAGTGGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLSWVGL*RAVESD
Trigger: GTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCT...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGGGGACCCAGATTTGTaGTTGATCAGAGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCGDPDL*LIRASK
Trigger: CTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCTATAGCTGCCACTTGTaGCTGTGGGCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPYSCHL*LWAEQV
Trigger: CACCTGCTCTGCCCACAGGCACAAGTGGCAGCTATA...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTAAGCAGAGTTATAGCTaGCACTTGTGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERPESGPQFHESRVIAATKQSYS*HLCLWA
Trigger: TGCCCACAGGCACAAGTGGCAGCTATAACTCTGCTT...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTGCCGGCGGGGTAACTTaGCTGTGGTTAGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLAGGVT*LWLVSL
Trigger: AAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGC...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLSETCP*PCSPAP
Trigger: TGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCTCAGGATCTTCAGGTaGTGCTCCCCTGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFLRIFR*CSPDRW
Trigger: CCACCTGTCAGGGGAGCACCACCTGAAGATCCTGAG...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCATGAAGCACTTGATCTaGCCCTTCTCGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVMKHLI*PFSPWR
Trigger: CCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCAT...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGATGGTCGGGGTTGAGTaGTGCTCTTTGAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEMVGVE*CSLKVL
Trigger: CAACACCTTCAAAGAGCACCACTCAACCCCGACCAT...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCTGGACCGCAGTTTCATaGAAGCAGAGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCWTAVS*KQSYSC
Trigger: GCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCA...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCATCGTCTTGCAGCTCTaGCCTCAGGATCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPIVLQL*PQDLQV
Trigger: CACCTGAAGATCCTGAGGGCAGAGCTGCAAGACGAT...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGTACACCTCTCCAGATaGCTCCTTGATGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPVHLSR*LLDDLA
Trigger: GGCCAGATCATCAAGGAGGCATCTGGAGAGGTGTAC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGTCGGGGTTGAGTGGTaGTCTTTGAAGGTGTTGACG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPVGVEW*SLKVLT
Trigger: CGTCAACACCTTCAAAGAGCACCACTCAACCCCGAC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCGCCGGCGGGGTAACTTaGCTGTGGTTAGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVAGGVT*LWLVSL
Trigger: AAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGC...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGGCGGCCTGGATGGCCTaGCACTCGTACACCGCATCG +
Preference number: 4 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWAAWMA*HSYTAS
Trigger: CGATGCGGTGTACGAGTGCCAGGCCATCCAGGCCGC...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGACGATGGTCAGGGATaGGTTGCCGGTCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIDDGQG*VAGPGA
Trigger: TGCGCCTGGACCGGCAACCCATCCCTGACCATCGTC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCACCTTTGAGATTTCTCTaGGAACGGGCACAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SAASSPRTELQEYGHKTPPLRFL*ERAQQN
Trigger: GTTCTGCTGTGCCCGTTCCCAGAGAAATCTCAAAGG...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCTTCCTCTCTTCTCGTaGAGCCTTACTGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLLPLFS*SLTEDR
Trigger: CCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGACAGAACAAACATGTTaGAGTAGTGTCCCTAACATT +
Preference number: 4 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQTEQTC*SSVPNI
Trigger: AATGTTAGGGACACTACTCCAACATGTTTGTTCTGT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CTTTCTGTACAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCTGGAGGCCCAGCTCTTaGCTGAAGAGGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSVQFLTERAMCSIQNAGWRPSS*LKRKKQ
Trigger: CTGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCA...GCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTGTACAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR TCA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGGATATCATTTTTGGCTaGCACAACACCTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWDIIFG*HNTFEI
Trigger: AATCTCAAAGGTGTTGTGTCAGCCAAAAATGATATC...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CTTTCTGTACAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCGTCTCTTTGTGCCTCTaGGTATCTGCAGCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: LSVQFLTERAMCSIQNAGVSLCL*VSAASR
Trigger: TCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGAC...GCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTGTACAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CCA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACAGGGGTAACTTGGCTGTaGTTAGTTTCTCTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTGVTWL*LVSLPW
Trigger: CCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCC...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTTGTAGTAGCCATTGGTaGGGTCCTTCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLCSSHW*GPSGSE
Trigger: TTCAGAACCTGAAGGACCCCACCAATGGCTACTACA...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGGAAGTGGCCAATTCTaGTGTCCTCTGCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPGSGQF*CPLQST
Trigger: GGTACTTTGCAGAGGACACCAGAATTGGCCACTTCC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCCTTCCTCTCTTCTCGTaGAGCCTTACTGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPLPLFS*SLTEDR
Trigger: CCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAG...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCTGGACCGCAGTTTCATaGAAGCAGAGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPWTAVS*KQSYSC
Trigger: GCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCA...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTATTTATTTCAGGTGGTaGCTAGGAGGGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLIYFRW*LGGLRC
Trigger: ACACCTCAACCCTCCTAGTCACCACCTGAAATAAAT...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCTGTAGTAGCCATTGGTaGGGTCCTTCAGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLLSRKIESKEGREPWVPCSSHW*GPSGSE
Trigger: TTCAGAACCTGAAGGACCCCACCAATGGCTACTACA...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTCTGAGGGAGCCTCTCTaGAACTCCCGCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQILREPL*NSRSQS
Trigger: GCTTTGTGAGCGGGAGTTCCAGAGAGGCTCCCTCAG...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGTGCCTCTGGGTATCTaGAGCCAGCCGACACAAACT +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIVPLGI*SQPTQT
Trigger: AGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCAC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIERHDG*HKDEEG
Trigger: GCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGTCTCTTTGTGCCTCTaGGTATCTGCAGCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIVSLCL*VSAASR
Trigger: TCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGAC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGTGCTCCCCTGACAGGTaGTTCCCTACCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWCSPDR*FPTTRY
Trigger: GTACCTGGTGGTAGGGAACCACCTGTCAGGGGAGCA...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGCTGAGGGAGCCTCTCTaGAACTCCCGCTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWLREPL*NSRSQS
Trigger: GCTTTGTGAGCGGGAGTTCCAGAGAGGCTCCCTCAG...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTAAACACCAAACAAATTaGGGGTGGGCTCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIKHQTN*GWAPGQ
Trigger: CTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTT...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGCAGAGCAGTGGAAAGTaGCGACGTTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWQSSGK*RRCPPA
Trigger: TGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTG...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR GCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGTACACCTCTCCAGATaGCTCCTTGATGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIVHLSR*LLDDLA
Trigger: GGCCAGATCATCAAGGAGGCATCTGGAGAGGTGTAC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR GCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTGTCGGGGTTGAGTGGTaGTCTTTGAAGGTGTTGACG +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIVGVEW*SLKVLT
Trigger: CGTCAACACCTTCAAAGAGCACCACTCAACCCCGAC...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQISETCP*PCSPAP
Trigger: TGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGA...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTGATATCATTTTTGGCTaGCACAACACCTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLDIIFG*HNTFEI
Trigger: AATCTCAAAGGTGTTGTGTCAGCCAAAAATGATATC...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCTGTACAGTTCCTGACTaGAAGAGCTATGTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVCTVPD*KSYVFN
Trigger: ATTGAACACATAGCTCTTTCAGTCAGGAACTGTACA...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR GCA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTAAGCAGAGTTATAGCTaGCACTTGTGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IKSKDRTARVWTQNTKQIKQSYS*HLCLWA
Trigger: TGCCCACAGGCACAAGTGGCAGCTATAACTCTGCTT...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR TCA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGACCCAGATTTGTGCTTaGTCAGAGCTTCGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWTQICA*SELRRK
Trigger: CTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGT...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS CCA 90 bp CGGCTGCCCGCGGCCTCACCTCCTCCGGGGGCTCGGTTAGCCTCCTaGCGCTGCAAGGCTGCCTGCGCGCGGTTCGCTCCGGGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RLPAASPPPGARLAS*RCKAACARFAPGEG
Trigger: TCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGGTGAGGCCGCGGGCAGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 90 bp CCTCCTCCGGGGGCTCGGTTAGCCTCCTGGCGCTGCAAGGCTGCCTaGGCGCGGTTCGCTCCGGGGGAGGGAGGAGGAGGGAGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PPPGARLASWRCKAA*ARFAPGEGGGGRRR
Trigger: TCGCCGCCTCCCTCCTCCTCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 90 bp CCCGCGGCCTCACCTCCTCCGGGGGCTCGGTTAGCCTCCTGGCGCTaGAAGGCTGCCTGCGCGCGGTTCGCTCCGGGGGAGGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PAASPPPGARLASWR*KAACARFAPGEGGG
Trigger: TCCTCCTCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGGTGAGGCCGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 90 bp CTCACCTCCTCCGGGGGCTCGGTTAGCCTCCTGGCGCTGCAAGGCTaGCTGCGCGCGGTTCGCTCCGGGGGAGGGAGGAGGAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LTSSGGSVSLLALQG*LRAVRSGGGRRREA
Trigger: CGCCTCCCTCCTCCTCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGGTGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CCA 90 bp GGACTCCTTTCACTGAAGCTGCAGGACCCACAGCCGGTCGGGCTCTaGCGCCAGCCTCGACGGCGGCCCCGCCATCTCCGCCCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLLSLKLQDPQPVGL*RQPRRRPRHLRPAA
Trigger: GGCAGCCGGGCGGAGATGGCGGGGCCGCCGTCGAGGCTGGCGCCAGAGCCCGACCGGCTGTGGGTCCTGCAGCTTCAGTGAAAGGAGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CCA 90 bp GCGATGCGGTCCGGCGGCGGCGTGCTCCGGATGAAGCACTTGATCTaGCCCTTCTCGCCGTGGAGGGCGTGCTGGGTCTGGGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AMRSGGGVLRMKHLI*PFSPWRACWVWVLE
Trigger: CTCCAGCACCCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAGCACGCCGCCGCCGGACCGCATCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000526519.5
ENST00000526764.1
ENST00000529097.6
ENST00000532647.1
CDS CCA 90 bp ACTGTGAGGCGTGCGGGGCGGGAGCGGATGGCGGCCTGGATGGCCTaGCACTCGTACACCGCATCGTCTTGCAGCTCTGCCCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: TVRRAGRERMAAWMA*HSYTASSCSSALRI
Trigger: GATCCTGAGGGCAGAGCTGCAAGACGATGCGGTGTACGAGTGCCAGGCCATCCAGGCCGCCATCCGCTCCCGCCCCGCACGCCTCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS-3UTR CAA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGTGGGCACACGCTGCTaGCCCGCAGGACGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GCPALSTAHSAAASVCLPVGTRC*PAGRRS
Trigger: CGACCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCAC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 90 bp CCTCCGCCGGTCCTCTCGGGTTCGCGCCTACCATCTGTCCGTCCGTaGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTGCCTCTGGGTATC +
Preference number: 5 (lower is better)
Translates to: PPPVLSGSRLPSVRP*VPPGGFGLFVPLGI
Trigger: GATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATGGTAGGCGCGAACCCGAGAGGACCGGCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS-3UTR CAA 90 bp AGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCGCCCGGCACACGTACTaGCCCGCGTCCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RRHVAQAHIHRCIRPTPCARHTY*PASSWR
Trigger: GCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGC...GCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACGCCCGGCACACGTACTaGCCCGCGTCCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHARHTY*PASSWR
Trigger: GCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGC...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp CAGCCCGGCACACGTACTTGCCCGCGTCCTCCTGGCGCACGGATTTaGGGGTCAGGGTCTTCTCATTGCTCAGGACCACTCCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: QPGTRTCPRPPGARI*GSGSSHCSGPLRSP
Trigger: GGGGCTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 90 bp CTCGGGTTCGCGCCTACCATCTGTCCGTCCGTGGGTCCCTCCGGGTaGCTTCGGTCTCTTTGTGCCTCTGGGTATCTGCAGCCAGCCGAC +
Preference number: 5 (lower is better)
Translates to: LGFAPTICPSVGPSG*LRSLCASGYLQPAD
Trigger: GTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATGGTAGGCGCGAACCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS-3UTR CAA 90 bp TCTGGTGTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGGCCCGGCACACGTACTaGCCCGCGTCCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SGVLCKVPLVPGQPERALARHTY*PASSWR
Trigger: GCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGC...CAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGACACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp AGTCGTAGAGGCGGCCCTGGCCGCTCAGGGTGCTGTAGATGTTGGTaGAGGACATGCCTGTGGGCACACGCTGCTTGCCCGCAGGACGCA +
Preference number: 5 (lower is better)
Translates to: SRRGGPGRSGCCRCW*RTCLWAHAACPQDA
Trigger: TGCGTCCTGCGGGCAAGCAGCGTGTGCCCACAGGCATGTCCTTCACCAACATCTACAGCACCCTGAGCGGCCAGGGCCGCCTCTACGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp GCAGCCTCCTGGGGTGGAAGCGGTGTGGCGTTTGGAGAGCCTGGCTaGGGAGCTGCCCACCGCCTCGGCAGGCTGCAAGTTTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: AASWGGSGVAFGEPG*GAAHRLGRLQVSCL
Trigger: AAGACAAGAAACTTGCAGCCTGCCGAGGCGGTGGGCAGCTCCTCAGCCAGGCTCTCCAAACGCCACACCGCTTCCACCCCAGGAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 90 bp CTCTCTGGAACTCCCGCTCACAAAGCTCGATGGACGAGCTGCCCATaGCCAGCACAAACCGCTGCCCGTAGTCGTAGAGGCGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LSGTPAHKARWTSCP*PAQTAARSRRGGPG
Trigger: GCCAGGGCCGCCTCTACGACTACGGGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGCGGGAGTTCCAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 90 bp GGGAGCCTCTCTGGAACTCCCGCTCACAAAGCTCGATGGACGAGCTaGCCATGCCCAGCACAAACCGCTGCCCGTAGTCGTAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GSLSGTPAHKARWTS*PCPAQTAARSRRGG
Trigger: GCCGCCTCTACGACTACGGGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGCGGGAGTTCCAGAGAGGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 90 bp CAGGACCACTCCGGAGCCCCGCTTCATCCAGACGATGGTCAGGGATaGGTTGCCGGTCCAGGCGCAGCTGAAGATGGCATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QDHSGAPLHPDDGQG*VAGPGAAEDGIRAQ
Trigger: CTGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCGGCAACCCATCCCTGACCATCGTCTGGATGAAGCGGGGCTCCGGAGTGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS-3UTR CAA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCCTCGGGAAGCCGGGATaGTCAGCAATGTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLLGKPG*SAMSPL
Trigger: GAGTGGGGACATTGCTGACAATCCCGGCTTCCCGAG...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCGCTGCAGGCTTGGCATaGTCTGCGTGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPAAGLA*SAWQVR
Trigger: CCTCACCTGCCACGCAGACAATGCCAAGCCTGCAGC...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp AGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATACGATGCTCTCCCGCTaGCCGTCCCGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SLAPTLPGAMLPRLTYTDTMLSR*PSRSRV
Trigger: GACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCGT...ATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTGTGGGCACACGCTGCTaGCCCGCAGGACGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: FWSARGRAHRETREWTAVVGTRC*PAGRRS
Trigger: CGACCTGCGTCCTGCGGGCAAGCAGCGTGTGCCCAC...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCCTGCCAGGCGCCATGTaGCCCAGGCTCACATACACC +
Preference number: 5 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPLPGAM*PRLTYT
Trigger: GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAG...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS TCA 90 bp GTTCTGTGGTCATCCGGGGCCCAAAGTAGACGTCAACCGTGCGGCTaGGGTTGGTGCTGCCCAGGGCGTTGGTCACCTCACAGGAGACGG +
Preference number: 5 (lower is better)
Translates to: VLWSSGAQSRRQPCG*GWCCPGRWSPHRRR
Trigger: CCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGTTGACGTCTACTTTGGGCCCCGGATGACCACAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 90 bp AGGAAAGCCGGCGGGGTAACTTGGCTGTGGTTAGTTTCTCTTCCTTaGCGGCTCTCGGTGCTCAGCCTCCGCCGGTCCTCTCGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: RKAGGVTWLWLVSLP*RLSVLSLRRSSRVR
Trigger: GCGAACCCGAGAGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 90 bp GTGATCCTTAGACGTGAGTCTGCATCCGCCGCTGCAGGGGTCGACTaGGGTCAGAGTTCTGGGACGAGGACTGGGAGTGGTGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VILRRESASAAAGVD*GQSSGTRTGSGGRR
Trigger: CCTCCTCCCACCACTCCCAGTCCTCGTCCCAGAACTCTGACCCCAGTCGACCCCTGCAGCGGCGGATGCAGACTCACGTCTAAGGATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp ATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGAACCGTGCGGCTGAGGTaGGTGCTGCCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: MLPRLTYTDASDPLPAPGTVRLR*VLPRAL
Trigger: CAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGT...TCCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTAACCGTGCGGCTGAGGTaGGTGCTGCCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVTVRLR*VLPRAL
Trigger: CAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGT...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCCTCCGGATGAAGCACTaGATCTGGCCCTTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LSLAPTLPGAMLPRLTYTLRMKH*IWPFSP
Trigger: CGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAG...GGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCGAGGAAGCAGAAGCCTaGCTGGCCTTGTCGAACTGC +
Preference number: 5 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALEEAEA*LALSNC
Trigger: GCAGTTCGACAAGGCCAGCAAGGCTTCTGCTTCCTC...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCTCCATTCTCTGGCTCTaGGCATCCCAGGCACACGGC +
Preference number: 5 (lower is better)
Translates to: LVQVNLSLAPTLPGAMLPSILWL*ASQAHG
Trigger: GCCGTGTGCCTGGGATGCCAAGAGCCAGAGAATGGA...GGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS TCA 90 bp CGCGGCCCCCTGGTTCCTACTTCCAGAGCACAGGGCCCGGCACTGTaGCATGAGCACTCTGTGGAGGTGGGGCAAGCTCCTTCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: RGPLVPTSRAQGPAL*HEHSVEVGQAPSGF
Trigger: AAAACCTGAAGGAGCTTGCCCCACCTCCACAGAGTGCTCATGTCACAGTGCCGGGCCCTGTGCTCTGGAAGTAGGAACCAGGGGGCCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 90 bp GCCCCGCTTGGCCCACCTGTACTGGGTGACAGCTGGGTTGGCCTTTaGAGAGCAGTGGAAAGTGACGACGTTGTCCTCCAGCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: APLGPPVLGDSWVGL*RAVESDDVVLQHWL
Trigger: CAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAAGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 90 bp TCCCGTACTTCTCTGGGAACGGGCACAGCAGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGCCACACCAGCTCCTACGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SRTSLGTGTAERHDG*HKDEEGHTSSYGHP
Trigger: GGGGTGGCCGTAGGAGCTGGTGTGGCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTCTGCTGTGCCCGTTCCCAGAGAAGTACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS CCA 90 bp TCCGTCCGTGGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTGCCTCTaGGTATCTGCAGCCAGCCGACACAAACTGCCTGTTCTTAGCCGC +
Preference number: 5 (lower is better)
Translates to: SVRGSLRVASVSLCL*VSAASRHKLPVLSR
Trigger: GCGGCTAAGAACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS-3UTR CAA 90 bp CCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCTGGAGGCCCAGCTCTaGACTGAAGAGGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: PGQPQPSAHSARRHVAQALEAQL*TEEEEA
Trigger: TGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCAG...AGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCAGAGCCAAGCCGTCCTaGATCCACAGAACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QVNLSLAPTLPGAMLPRLRAKPS*IHRTKP
Trigger: TGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTCT...GAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCAGAGCCAAGCCGTCCTaGATCCACAGAACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSRAKPS*IHRTKP
Trigger: TGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTCT...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACAGGTACTGTGGGTAACTaGAGAGGTCCCTGCCCACAC +
Preference number: 5 (lower is better)
Translates to: VNLSLAPTLPGAMLPRLTGTVGN*RGPCPH
Trigger: GTGTGGGCAGGGACCTCTCAAGTTACCCACAGTACC...TGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACGCTGCAGGCTTGGCATaGTCTGCGTGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHAAGLA*SAWQVR
Trigger: CCTCACCTGCCACGCAGACAATGCCAAGCCTGCAGC...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGCCTCCGGGGATGGCTTaGTTGGTGGCACGACACACG +
Preference number: 5 (lower is better)
Translates to: FSLVQVNLSLAPTLPGAMPPGMA*LVARHT
Trigger: CGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGG...CATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACTGGAAAGTGACGACGTaGTCCTCCAGCACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHWKVTT*SSSTGC
Trigger: ACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCA...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGACCGTGCGGCTGAGGTaGGTGCTGCCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQTVRLR*VLPRAL
Trigger: CAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGT...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATCCACGAGCAAGGATaGGGGTTCTGTGGTCATCCG +
Preference number: 5 (lower is better)
Translates to: GQPQPSAHSARRHVAQAHIHEQG*GFCGHP
Trigger: CGGATGACCACAGAACCCCAATCCTTGCTCGTGGAT...GTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCAAGGCCATTTCTGGCTaGTCAGCCTCCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSKAISG*SASRVW
Trigger: CCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTT...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCCATCGGCACAGACTCTaGCTCCTTGAGCCGGATGAT +
Preference number: 5 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALHRHRL*LLEPDD
Trigger: ATCATCCGGCTCAAGGAGCAAGAGTCTGTGCCGATG...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529097.6
CDS TCA 90 bp TGGCATCCCAGGCACACGGCTTCCTCAGGCGGGCTCCTCCCACAGTaGGCGAGCGAGCTAGTGACGAGTGACAGAAGGACTCCTTTCACT +
Preference number: 5 (lower is better)
Translates to: WHPRHTASSGGLLPQ*ASELVTSDRRTPFT
Trigger: AGTGAAAGGAGTCCTTCTGTCACTCGTCACTAGCTCGCTCGCTCACTGTGGGAGGAGCCCGCCTGAGGAAGCCGTGTGCCTGGGATGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS CCA 90 bp GCCCACCTGTACTGGGTGACAGCTGGGTTGGCCTTTGCAGAGCAGTaGAAAGTGACGACGTTGTCCTCCAGCACTGGCTGTGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AHLYWVTAGLAFAEQ*KVTTLSSSTGCGST
Trigger: GGTGGAGCCACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS-3UTR CAA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCAGCCGGCGGGGTAACTaGGCTGTGGTTAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGSRRGN*AVVSFS
Trigger: AGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGAGCGTGGCAGGTGAGGTaGAGAGGGTCCCCCGCACGC +
Preference number: 5 (lower is better)
Translates to: PPQSSAASSPRTELQEYGAWQVR*RGSPAR
Trigger: GCGTGCGGGGGACCCTCTCAACCTCACCTGCCACGC...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGATGGAGGCTGCAGGCTaGGCATTGTCTGCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QAPCCPGSHTPMHQTHSLMEAAG*ALSAWQ
Trigger: CTGCCACGCAGACAATGCCAAGCCTGCAGCCTCCAT...CAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACATGGAGGCTGCAGGCTaGGCATTGTCTGCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHMEAAG*ALSAWQ
Trigger: CTGCCACGCAGACAATGCCAAGCCTGCAGCCTCCAT...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCACGATGCTCTCCCGCTaGCCGTCCCGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRTMLSR*PSRSRV
Trigger: GACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCGT...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCGGGGATGGCTTTGTaGGTGGCACGACACACGATG +
Preference number: 5 (lower is better)
Translates to: QAPCCPGSHTPMHQTHSLPGMAL*VARHTM
Trigger: CATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGG...CAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp GTCCTCTGCAAAGTACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTCCTCCGGGGATGGCTTaGTTGGTGGCACGACACACG +
Preference number: 5 (lower is better)
Translates to: VLCKVPLVPGQPERALTSPPGMA*LVARHT
Trigger: CGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGG...AGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGTACTTTGCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCATCCACGAGCAAGGATaGGGGTTCTGTGGTCATCCG +
Preference number: 5 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGIHEQG*GFCGHP
Trigger: CGGATGACCACAGAACCCCAATCCTTGCTCGTGGAT...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GCGCCCACTCTGCCAGGCGCCATGTTGCCCAGGCTCACATACACCGATGCATCAGTCAGGGTCTTCTCATaGCTCAGGACCACTCCGGAG +
Preference number: 5 (lower is better)
Translates to: APTLPGAMLPRLTYTDASVRVFS*LRTTPE
Trigger: CTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGAC...TGATGCATCGGTGTATGTGAGCCTGGGCAACATGGCGCCTGGCAGAGTGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp ACCCCTCGTCCCTGGACAACCAGAACGTGCCCTGACCTCTTCCCTGGCCCGTCCTCCATCATCAGCTGCTaGATGGTGGAGTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TPRPWTTRTCPDLFPGPSSIISC*MVECSS
Trigger: TGAGGAGCACTCCACCATCAAGCAGCTGATGATGGA...GGACGGGCCAGGGAAGAGGTCAGGGCACGTTCTGGTTGTCCAGGGACGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCG +
Preference number: 5 (lower is better)
Translates to: ELRRKAVAEALGGCPGSGPGDPD*CLIRAS
Trigger: CGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGG...GCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTCCTTCGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 90 bp CATCTGTCCGTCCGTGGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTaGCTCTGGGTATCTGCAGCCAGCCGACACAAACTGCCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HLSVRGSLRVASVSL*LWVSAASRHKLPVL
Trigger: AAGAACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 90 bp CATTCCTTAGCGCAGCGAAGGAAAGCCGGCGGGGTAACTTGGCTGTaGTTAGTTTCTCTTCCTTGGCGGCTCTCGGTGCTCAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: HSLAQRRKAGGVTWL*LVSLPWRLSVLSLR
Trigger: GCGGAGGCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGCTAAGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 90 bp GGCCTTTGCAGAGCAGTGGAAAGTGACGACGTTGTCCTCCAGCACTaGCTGTGGCTCCACCGAGAGGTTGACCAGTGGAGGGTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GLCRAVESDDVVLQH*LWLHREVDQWRVLD
Trigger: ATCCAGCACCCTCCACTGGTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 90 bp TTGTCAGCAATGTCCCCACTCGGAGAAGATCCATTCTCTGGCTCTTaGCATCCCAGGCACACGGCTTCCTCAGGCGGGCTCCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LSAMSPLGEDPFSGS*HPRHTASSGGLLPQ
Trigger: CTGTGGGAGGAGCCCGCCTGAGGAAGCCGTGTGCCTGGGATGCCAAGAGCCAGAGAATGGATCTTCTCCGAGTGGGGACATTGCTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS-3UTR CAA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAGCTGCAGGCTTGGCATaGTCTGCGTGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRAAGLA*SAWQVR
Trigger: CCTCACCTGCCACGCAGACAATGCCAAGCCTGCAGC...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GAAGGCAGTGGCAGAGGCGCTGGGAGGCTGTCCTGGAAGTGGCCAATTCTGGTGCCAGAGGCTGGTTCCTaGTGGACAATTTCCACTCGG +
Preference number: 5 (lower is better)
Translates to: EGSGRGAGRLSWKWPILVPEAGS*WTISTR
Trigger: CCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGG...CACCAGAATTGGCCACTTCCAGGACAGCCTCCCAGCGCCTCTGCCACTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp GTTGGTGCTGCCCAGGGCGTTGGTCACCTCACAGGAGACGGGCTCTaGGAAGTACGTGTAGTCCACTGTGGTCCTGTACACCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VGAAQGVGHLTGDGL*EVRVVHCGPVHLSR
Trigger: TCTGGAGAGGTGTACAGGACCACAGTGGACTACACGTACTTCTCAGAGCCCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCACCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 90 bp TCATCCAGACGATGGTCAGGGATGGGTTGCCGGTCCAGGCGCAGCTaGAGATGGCATCAGAGCCCAGATCCACGAGCAAGGATTGGGGTT +
Preference number: 5 (lower is better)
Translates to: SSRRWSGMGCRSRRS*RWHQSPDPRARIGV
Trigger: AACCCCAATCCTTGCTCGTGGATCTGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCGGCAACCCATCCCTGACCATCGTCTGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 90 bp TTTGAGATTTCTCTGGGAACGGGCACAGCAGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGCCACACCAGCTCCTACGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: FEISLGTGTAERHDG*HKDEEGHTSSYGHP
Trigger: GGGGTGGCCGTAGGAGCTGGTGTGGCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTCTGCTGTGCCCGTTCCCAGAGAAATCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CCA 90 bp TTTCCTCCGGGGATGGCTTTGTTGGTGGCACGACACACGATGCTCTaGCCATTCTCCACGTCACCAGGGGAGATGAAGAGGGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: FPPGMALLVARHTML*PFSTSPGEMKRVLT
Trigger: CGTCAGCACCCTCTTCATCTCCCCTGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGGTGGCTTCGGTCTCTTaGTGCCTCTGGGTATCTGCA +
Preference number: 5 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRVASVS*CLWVSA
Trigger: TGCAGATACCCAGAGGCACAAAGAGACCGAAGCCAC...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGAGCCGGCGGGGTAACTaGGCTGTGGTTAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRSRRGN*AVVSFS
Trigger: AGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCT...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCGCTGAAGGAATAGACTaGGCCTTCATTCATTCTCCG +
Preference number: 5 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALAEGID*AFIHSP
Trigger: CGGAGAATGAATGAAGGCCAAGTCTATTCCTTCAGC...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCCTCCGGGGATGGCTTaGTTGGTGGCACGACACACG +
Preference number: 5 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWPPGMA*LVARHT
Trigger: CGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGG...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACTCCGAACCTTGCTCCTaGAGCCGGATGATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHSEPCS*SRMISV
Trigger: CACTGAGATCATCCGGCTCAAGGAGCAAGGTTCGGA...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALDPDLC*IRASKE
Trigger: TTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTC...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GCCTCCAGGAAAGGGCCGGGGACACGGGTGTCCAGCACTAAGCACAGCGCACTCACAGGATCGCCGTTCTaGTGTTTATCAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: ASRKGPGTRVSSTKHSALTGSPF*CLSAEK
Trigger: CTTCTCAGCTGATAAACACAAGAACGGCGATCCTGT...GAGTGCGCTGTGCTTAGTGCTGGACACCCGTGTCCCCGGCCCTTTCCTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 90 bp CGGTCTCTTTGTGCCTCTGGGTATCTGCAGCCAGCCGACACAAACTaGCTGTTCTTAGCCGCCTCGGGAAGCCGGGATTGTCAGCAATGT +
Preference number: 5 (lower is better)
Translates to: RSLCASGYLQPADTN*LFLAASGSRDCQQC
Trigger: ACATTGCTGACAATCCCGGCTTCCCGAGGCGGCTAAGAACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 90 bp CCGCAAGACAGTGGTATCCTTGGGGGCAGGGACTGTGTTTTTACATaGACAGCGCCAGGCACAGAGCGGGTACTGGACACATGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PQDSGILGGRDCVFT*TAPGTERVLDTWLV
Trigger: CACCAACCATGTGTCCAGTACCCGCTCTGTGCCTGGCGCTGTGCATGTAAAAACACAGTCCCTGCCCCCAAGGATACCACTGTCTTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 90 bp GGGTTTCATTCCTTAGCGCAGCGAAGGAAAGCCGGCGGGGTAACTTaGCTGTGGTTAGTTTCTCTTCCTTGGCGGCTCTCGGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GFHSLAQRRKAGGVT*LWLVSLPWRLSVLS
Trigger: GCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGCTAAGGAATGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 90 bp TGCAGAGCAGTGGAAAGTGACGACGTTGTCCTCCAGCACTGGCTGTaGCTCCACCGAGAGGTTGACCAGTGGAGGGTGCTGGATGTCAAT +
Preference number: 5 (lower is better)
Translates to: CRAVESDDVVLQHWL*LHREVDQWRVLDVN
Trigger: ATTGACATCCAGCACCCTCCACTGGTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 90 bp TCGTCATCAGTAAAGCTAGAATGCGAAAACTGCAGCCTCCTGGGGTaGAAGCGGTGTGGCGTTTGGAGAGCCTGGCTGAGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSSVKLECENCSLLG*KRCGVWRAWLRSCP
Trigger: TGGGCAGCTCCTCAGCCAGGCTCTCCAAACGCCACACCGCTTCCACCCCAGGAGGCTGCAGTTTTCGCATTCTAGCTTTACTGATGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS-3UTR CAA 90 bp AGCACCTGGGGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCCGGGGATGGCTTTGTaGGTGGCACGACACACGATG +
Preference number: 5 (lower is better)
Translates to: STWGPRFVLDQSFEGRQWPGMAL*VARHTM
Trigger: CATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGG...CCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGACCGGGGATGGCTTTGTaGGTGGCACGACACACGATG +
Preference number: 5 (lower is better)
Translates to: GVEPTERPESGPQFHESRPGMAL*VARHTM
Trigger: CATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGG...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGTCTCCAGATGCCTCCTaGATGATCTGGCCCCGCTTG +
Preference number: 5 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARSPDAS*MIWPRL
Trigger: CAAGCGGGGCCAGATCATCAAGGAGGCATCTGGAGA...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGTCTCCAGATGCCTCCTaGATGATCTGGCCCCGCTTG +
Preference number: 5 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWSPDAS*MIWPRL
Trigger: CAAGCGGGGCCAGATCATCAAGGAGGCATCTGGAGA...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAGTGCTGCCCAGGGCGTaGGTCACCTCACAGGAGACG +
Preference number: 5 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRVLPRA*VTSQET
Trigger: CGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCAC...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GTATGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGGTCAGGGTCTTCTCATaGCTCAGGACCACTCCGGAG +
Preference number: 5 (lower is better)
Translates to: VWTQNTKQIGGGLPASLVVRVFS*LRTTPE
Trigger: CTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGAC...CACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGACCCAGATTTGTGCTTGATCAGAGCTTCGAAGGAAGGCAGTGGCAGAGGCGCTCCTGGCGCACGGATTaGAGGGTCAGGGTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GPRFVLDQSFEGRQWQRRSWRTD*RVRVFS
Trigger: TGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGA...GCGCCTCTGCCACTGCCTTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGGTGTCCAGCACTAAGCACAGCGCACTCAGCCGCAGCCTCTGTCTGTCTCCCCGACCCAGATTTGTGCTaGATCAGAGCTTCGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GCPALSTAHSAAASVCLPDPDLC*IRASKE
Trigger: TTCCTTCGAAGCTCTGATCAAGCACAAATCTGGGTC...GGGGAGACAGACAGAGGCTGCGGCTGAGTGCGCTGTGCTTAGTGCTGGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CTGTATGGGAGCACAGGCACAGGGGTAGGTAGAGCTTCTGGTCAGCGAGGGGTACCTGGGGACCCAGATTaGTGCTTGATCAGAGCTTCG +
Preference number: 5 (lower is better)
Translates to: LYGSTGTGVGRASGQRGVPGDPD*CLIRAS
Trigger: CGAAGCTCTGATCAAGCACAAATCTGGGTCCCCAGG...TACCCCTCGCTGACCAGAAGCTCTACCTACCCCTGTGCCTGTGCTCCCATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TTCTGGTCAGCGAGGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTAAGGCCATTTCTGGCTaGTCAGCCTCCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: FWSARGRAHRETREWTAVKAISG*SASRVW
Trigger: CCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTT...AACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCCTCGCTGACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp GGTAACTTGAGAGGTCCCTGCCCACACCCAGAGCCAAGCCGTCCTTaGTCCACAGAACGAAGCCATCGTATTCGGGGATGGCGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: GNLRGPCPHPEPSRP*STERSHRIRGWRKV
Trigger: TACTTTGCGCCATCCCCGAATACGATGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTCTGGGTGTGGGCAGGGACCTCTCAAGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 90 bp TGCTGGAATTCACCCCGGTCCATCATCAGCTGCTTGATGGTGGAGTaGTCCTCACCCTCCCGACCAGAGGCTGGTTCCTTGTGGACAATT +
Preference number: 5 (lower is better)
Translates to: CWNSPRSIISCLMVE*SSPSRPEAGSLWTI
Trigger: AATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTCCACCATCAAGCAGCTGATGATGGACCGGGGTGAATTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAGTGGCTTCGGTCTCTTaGTGCCTCTGGGTATCTGCA +
Preference number: 5 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRVASVS*CLWVSA
Trigger: TGCAGATACCCAGAGGCACAAAGAGACCGAAGCCAC...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCGCGTGGCAGGTGAGGTaGAGAGGGTCCCCCGCACGC +
Preference number: 5 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVAWQVR*RGSPAR
Trigger: GCGTGCGGGGGACCCTCTCAACCTCACCTGCCACGC...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CAAGGCCATTTCTGGCTTGTCAGCCTCCAGGGTATGGGCTATGAGCAGCAGTGGTGGAAAGTGACGACGTaGTCCTCCAGCACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: QGHFWLVSLQGMGYEQQWWKVTT*SSSTGC
Trigger: ACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCA...CCACTGCTGCTCATAGCCCATACCCTGGAGGCTGACAAGCCAGAAATGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGTGCTGCCCAGGGCGTaGGTCACCTCACAGGAGACG +
Preference number: 5 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCVLPRA*VTSQET
Trigger: CGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCAC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGTCCGAACCTTGCTCCTaGAGCCGGATGATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARSEPCS*SRMISV
Trigger: CACTGAGATCATCCGGCTCAAGGAGCAAGGTTCGGA...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGCTTCATTTCCGAACCTaGCTCCTTGAGCCGGATGAT +
Preference number: 5 (lower is better)
Translates to: HVAQAHIHRCIRPTPCPRLHFRT*LLEPDD
Trigger: ATCATCCGGCTCAAGGAGCAAGGTTCGGAAATGAAG...CCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp AGCTCAGTGCTGGGAAGACGTCATCCCCTTCTCCCCAGGGCTGTATGGGAGCACGCTGACACAACACCTTaGAGATTTCTCTGGGAACGG +
Preference number: 5 (lower is better)
Translates to: SSVLGRRHPLLPRAVWEHADTTP*RFLWER
Trigger: CCGTTCCCAGAGAAATCTCAAAGGTGTTGTGTCAGC...GTGCTCCCATACAGCCCTGGGGAGAAGGGGATGACGTCTTCCCAGCACTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGAGGAAGCAGAAGCCTaGCTGGCCTTGTCGAACTGC +
Preference number: 5 (lower is better)
Translates to: GVEPTERPESGPQFHESREEAEA*LALSNC
Trigger: GCAGTTCGACAAGGCCAGCAAGGCTTCTGCTTCCTC...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TGGACACAAAACACCAAACAAATTGGGGGTGGGCTCCCGGCCAGCCTGGTGAGAAAAACACCAAACAAATaGGGGGTGGGCTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: WTQNTKQIGGGLPASLVRKTPNK*GVGSRP
Trigger: TGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTT...TCTCACCAGGCTGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTTGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp ATGTTGCCCAGGCTCACATACACCGATGCATCAGACCCACTCCCTGCCCCAGGAGCTGAAGGAATAGACTaGGCCTTCATTCATTCTCCG +
Preference number: 5 (lower is better)
Translates to: MLPRLTYTDASDPLPAPGAEGID*AFIHSP
Trigger: CGGAGAATGAATGAAGGCCAAGTCTATTCCTTCAGC...TCCTGGGGCAGGGAGTGGGTCTGATGCATCGGTGTATGTGAGCCTGGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCACGATGCTCTCCCGCTaGCCGTCCCGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PLLSRKIESKEGREPWVPTMLSR*PSRSRV
Trigger: GACCCTGCTTCGGGACGGCAAGCGGGAGAGCATCGT...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp GATGAAGTTCAGTCTAGTCCAGGTCAACCTCAGCCTAGCGCCCACTCTGCCAGGAAAGCAATTCCTTTATaGCTTCCCCACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: DEVQSSPGQPQPSAHSARKAIPL*LPHPLP
Trigger: GGGGAGTGGGTGGGGAAGCAATAAAGGAATTGCTTT...CCTGGCAGAGTGGGCGCTAGGCTGAGGTTGACCTGGACTAGACTGAACTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS CCA 90 bp GCGAAACTCCGTCTCTGTCTTCATTCATTCTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCAGACAGCATCCTCTCTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: AKLRLCLHSFSETCP*PCSPAPDSILSSGG
Trigger: GCCTCCAGAAGAGAGGATGCTGTCTGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGACAGAGACGGAGTTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549874.1
CDS-3UTR CAA 90 bp GATATACTTCCTCTCTTCTCGTGGAGCCTTACTGAAGACAGGATCGCCGTTCTTCTCGGGAAGCCGGGATaGTCAGCAATGTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: DILPLFSWSLTEDRIAVLLGKPG*SAMSPL
Trigger: GAGTGGGGACATTGCTGACAATCCCGGCTTCCCGAG...AAGAACGGCGATCCTGTCTTCAGTAAGGCTCCACGAGAAGAGAGGAAGTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGACTGGAGGCCCAGCTCTaGACTGAAGAGGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRLEAQL*TEEEEA
Trigger: TGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCAG...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TCTCGCCATCTTAAAGACCTGCCCTCCAGCCCCTTCAAACGCCACACTTCCCAGGCTGAAGGAATAGACTaGGCCTTCATTCATTCTCCG +
Preference number: 5 (lower is better)
Translates to: SRHLKDLPSSPFKRHTSQAEGID*AFIHSP
Trigger: CGGAGAATGAATGAAGGCCAAGTCTATTCCTTCAGC...CTGGGAAGTGTGGCGTTTGAAGGGGCTGGAGGGCAGGTCTTTAAGATGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp AACCCTGACCAGAGAAGCTCCCGCACTTCTTATATGAACTCCGATTGTGCTGAGGGTACTGTGGGTAACTaGAGAGGTCCCTGCCCACAC +
Preference number: 5 (lower is better)
Translates to: NPDQRSSRTSYMNSDCAEGTVGN*RGPCPH
Trigger: GTGTGGGCAGGGACCTCTCAAGTTACCCACAGTACC...CTCAGCACAATCGGAGTTCATATAAGAAGTGCGGGAGCTTCTCTGGTCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCGGTACTGTGGGTAACTaGAGAGGTCCCTGCCCACAC +
Preference number: 5 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCGTVGN*RGPCPH
Trigger: GTGTGGGCAGGGACCTCTCAAGTTACCCACAGTACC...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAATGGAGGCTGCAGGCTaGGCATTGTCTGCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SAASSPRTELQEYGHKTPMEAAG*ALSAWQ
Trigger: CTGCCACGCAGACAATGCCAAGCCTGCAGCCTCCAT...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAATCCACGAGCAAGGATaGGGGTTCTGTGGTCATCCG +
Preference number: 5 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRIHEQG*GFCGHP
Trigger: CGGATGACCACAGAACCCCAATCCTTGCTCGTGGAT...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACACTCCGGATGAAGCACTaGATCTGGCCCTTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTLRMKH*IWPFSP
Trigger: CGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAG...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS TCA 90 bp GCGCCAGGCACAGAGCGGGTACTGGACACATGGTTGGTGAATAAATaGGCATTCCGCCGTGTTCACAGTCTTTACACACACTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: APGTERVLDTWLVNK*AFRRVHSLYTHWYL
Trigger: CAAGTACCAGTGTGTGTAAAGACTGTGAACACGGCGGAATGCTCATTTATTCACCAACCATGTGTCCAGTACCCGCTCTGTGCCTGGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS TCA 90 bp CATGCACAGCGCCAGGCACAGAGCGGGTACTGGACACATGGTTGGTaGATAAATGAGCATTCCGCCGTGTTCACAGTCTTTACACACACT +
Preference number: 5 (lower is better)
Translates to: HAQRQAQSGYWTHGW*INEHSAVFTVFTHT
Trigger: AGTGTGTGTAAAGACTGTGAACACGGCGGAATGCTCATTTATTCACCAACCATGTGTCCAGTACCCGCTCTGTGCCTGGCGCTGTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 90 bp TTCTCCTCTTCTTTGAGGACCTCCAGCTGTTTCAGGACTGAGTCTTaGTGGAATTCACCCCGGTCCATCATCAGCTGCTTGATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FSSSLRTSSCFRTES*WNSPRSIISCLMVE
Trigger: CTCCACCATCAAGCAGCTGATGATGGACCGGGGTGAATTCCAGCAAGACTCAGTCCTGAAACAGCTGGAGGTCCTCAAAGAAGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 90 bp ATGGTGGAGTGCTCCTCACCCTCCCGACCAGAGGCTGGTTCCTTGTaGACAATTTCCACTCGGATATCATTTTTGGCTGACACAACACCT +
Preference number: 5 (lower is better)
Translates to: MVECSSPSRPEAGSL*TISTRISFLADTTP
Trigger: AGGTGTTGTGTCAGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTCCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CCA 90 bp AAGAGCGAAACTCCGTCTCTTCATTCATTCTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCAGACAGCATCCTCTCTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: KSETPSLHSFSETCP*PCSPAPDSILSSGG
Trigger: GCCTCCAGAAGAGAGGATGCTGTCTGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGAGACGGAGTTTCGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS-3UTR CAA 90 bp AATCAAAGGAGGGCAGAGAACCTTGGGTTCCCAACGCATTCTATGAGCTCTTGGAGAGCCAAGCCGTCCTaGATCCACAGAACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: NQRRAENLGFPTHSMSSWRAKPS*IHRTKP
Trigger: TGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTCT...CCAAGAGCTCATAGAATGCGTTGGGAACCCAAGGTTCTCTGCCCTCCTTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp CTTTCTGTACAGTTCCTGACTGAAAGAGCTATGTGTTCAATCCAAAATGCTGGCGTGCTGCCCAGGGCGTaGGTCACCTCACAGGAGACG +
Preference number: 5 (lower is better)
Translates to: LSVQFLTERAMCSIQNAGVLPRA*VTSQET
Trigger: CGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCAC...GCCAGCATTTTGGATTGAACACATAGCTCTTTCAGTCAGGAACTGTACAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAGTCAGGGTCTTCTCATaGCTCAGGACCACTCCGGAG +
Preference number: 5 (lower is better)
Translates to: SAASSPRTELQEYGHKTPVRVFS*LRTTPE
Trigger: CTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGAC...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCACCGCAGAGTTCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACTTCATTTCCGAACCTaGCTCCTTGAGCCGGATGAT +
Preference number: 5 (lower is better)
Translates to: PPQSSAASSPRTELQEYGLHFRT*LLEPDD
Trigger: ATCATCCGGCTCAAGGAGCAAGGTTCGGAAATGAAG...TCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGAACTCTGCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp GAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGTTATAGCTGCCACTAAAACACCAAACAAATaGGGGGTGGGCTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: ERPESGPQFHESRVIAATKTPNK*GVGSRP
Trigger: TGGCCGGGAGCCCACCCCCAATTTGTTTGGTGTTTT...AGTGGCAGCTATAACTCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp GGGGTAGAGCCCACAGAGAGACCAGAGAGTGGACCGCAGTTTCATGAAAGCAGAGCATTCTATGAGCTCTaGGGTTCTTCCTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GVEPTERPESGPQFHESRAFYEL*GSSCGF
Trigger: AAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGC...TCTGCTTTCATGAAACTGCGGTCCACTCTCTGGTCTCTCTGTGGGCTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCACTGGAGGCCCAGCTCTaGACTGAAGAGGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SAASSPRTELQEYGHKTPLEAQL*TEEEEA
Trigger: TGCTTCTTCCTCTTCAGTCAAGAGCTGGGCCTCCAG...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGGCGTGGCAGGTGAGGTaGAGAGGGTCCCCCGCACGC +
Preference number: 5 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWAWQVR*RGSPAR
Trigger: GCGTGCGGGGGACCCTCTCAACCTCACCTGCCACGC...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp TCAGCGGCATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCATGGAAAGTGACGACGTaGTCCTCCAGCACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: SAASSPRTELQEYGHKTPWKVTT*SSSTGC
Trigger: ACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCA...TGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGATGCCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CTATGTGTTCAATCCAAAATGCTGGCTGCCCTGCAGATGAAGTTCAGTCTAGTCTCCTGGCGCACGGATTaGAGGGTCAGGGTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LCVQSKMLAALQMKFSLVSWRTD*RVRVFS
Trigger: TGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGA...GACTAGACTGAACTTCATCTGCAGGGCAGCCAGCATTTTGGATTGAACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS-3UTR CAA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCACAGACTCTTGCTCCTaGAGCCGGATGATCTCAGTG +
Preference number: 5 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCTDSCS*SRMISV
Trigger: CACTGAGATCATCCGGCTCAAGGAGCAAGAGTCTGT...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529097.6
CDS-3UTR CAA 90 bp CCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCCCGTTAGTTTCTCTTCCTaGGCGGCTCTCGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: PLLSRKIESKEGREPWVPVSFSS*AALGAQ
Trigger: CTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAAC...GGGAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS TCA 90 bp AAACTCTTTCTCCTCTTCTTTGAGGACCTCCAGCTGTTTCAGGACTaGGTCTTGCTGGAATTCACCCCGGTCCATCATCAGCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KLFLLFFEDLQLFQD*VLLEFTPVHHQLLD
Trigger: ATCAAGCAGCTGATGATGGACCGGGGTGAATTCCAGCAAGACTCAGTCCTGAAACAGCTGGAGGTCCTCAAAGAAGAGGAGAAAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS TCA 90 bp CTTCTGGCCTGGAGAATCTGTAATGATAGGGGTCTAAGCCTGCCCTaGCTACACCCGGGATTTGAATCTAGATTTCTCCTACTCCTAAGC +
Preference number: 5 (lower is better)
Translates to: LLAWRICNDRGLSLP*LHPGFESRFLLLLS
Trigger: GCTTAGGAGTAGGAGAAATCTAGATTCAAATCCCGGGTGTAGTCAGGGCAGGCTTAGACCCCTATCATTACAGATTCTCCAGGCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS-3UTR CAA 90 bp GTTCCCAACGCATTCTATGAGCTCTTGGGTTCTTCCTGTGGCTTTGTAGGAACAGCTGACACAACACCTTaGAGATTTCTCTGGGAACGG +
Preference number: 5 (lower is better)
Translates to: VPNAFYELLGSSCGFVGTADTTP*RFLWER
Trigger: CCGTTCCCAGAGAAATCTCAAAGGTGTTGTGTCAGC...TGTTCCTACAAAGCCACAGGAAGAACCCAAGAGCTCATAGAATGCGTTGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCACAGGATCGCCGTTCTaGTGTTTATCAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCTGSPF*CLSAEK
Trigger: CTTCTCAGCTGATAAACACAAGAACGGCGATCCTGT...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTCTCCGGATGAAGCACTaGATCTGGCCCTTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: IKSKDRTARVWTQNTKQILRMKH*IWPFSP
Trigger: CGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAG...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCACACTTCCCAGGAAGCACTCTCTCCATAAGTGTTCAGAGAACCCTGACCAGAACTCGGATATCATTTTaGGCTGACACAACACCTTTG +
Preference number: 5 (lower is better)
Translates to: PHFPGSTLSISVQRTLTRTRISF*ADTTPL
Trigger: CAAAGGTGTTGTGTCAGCCAAAAATGATATCCGAGT...TCTGGTCAGGGTTCTCTGAACACTTATGGAGAGAGTGCTTCCTGGGAAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp TGCCTTTATTGTCTAGGAAGATTGAATCAAAGGAGGGCAGAGAACCTTGGGTTCTCCATCATCAGCTGCTaGATGGTGGAGTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: CLYCLGRLNQRRAENLGFSIISC*MVECSS
Trigger: TGAGGAGCACTCCACCATCAAGCAGCTGATGATGGA...GAACCCAAGGTTCTCTGCCCTCCTTTGATTCAATCTTCCTAGACAATAAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp ATCAAGTCCAAGGACAGAACTGCAAGAGTATGGACACAAAACACCAAACAAATTTCTCCAGATGCCTCCTaGATGATCTGGCCCCGCTTG +
Preference number: 5 (lower is better)
Translates to: IKSKDRTARVWTQNTKQISPDAS*MIWPRL
Trigger: CAAGCGGGGCCAGATCATCAAGGAGGCATCTGGAGA...AATTTGTTTGGTGTTTTGTGTCCATACTCTTGCAGTTCTGTCCTTGGACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp CCGTTCTTGTGTTTATCAGCTGAGAAGGGCAGTCTCGCCATCTTAAAGACCTGCACTCGGATATCATTTTaGGCTGACACAACACCTTTG +
Preference number: 5 (lower is better)
Translates to: PFLCLSAEKGSLAILKTCTRISF*ADTTPL
Trigger: CAAAGGTGTTGTGTCAGCCAAAAATGATATCCGAGT...GCAGGTCTTTAAGATGGCGAGACTGCCCTTCTCAGCTGATAAACACAAGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS-3UTR CAA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGTCCTGGCGCACGGATTaGAGGGTCAGGGTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWSWRTD*RVRVFS
Trigger: TGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGA...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS-3UTR CAA 90 bp AAAAGAACAGAACAAACATGTTGGAGTAGTGTCCCTAACATTTATTTCAGGTGGCCAGAGGCTGGTTCCTaGTGGACAATTTCCACTCGG +
Preference number: 5 (lower is better)
Translates to: KRTEQTCWSSVPNIYFRWPEAGS*WTISTR
Trigger: CCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGG...CCACCTGAAATAAATGTTAGGGACACTACTCCAACATGTTTGTTCTGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525144.7
CDS TCA 90 bp TCACCATTATTGACCAAAAGGCATCTTGAGCTTGGAGTGGAGCTGTaGCTTTTTGTCCACACGATGTCCTGTTTAACAGTGAAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: SPLLTKRHLELGVEL*LFVHTMSCLTVKLR
Trigger: CCTTAACTTCACTGTTAAACAGGACATCGTGTGGACAAAAAGTCACAGCTCCACTCCAAGCTCAAGATGCCTTTTGGTCAATAATGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547738.5
CDS GCA 72 bp GGGGCTCGGTTAGCCTCCTGGCGCTGCAAGGCTGCCTaGGCGCGGTTCGCTCCGGGGGAGGGAGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GARLASWRCKAA*ARFAPGEGGGG
Trigger: CCCTCCTCCTCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 72 bp TCCGGGGGCTCGGTTAGCCTCCTGGCGCTGCAAGGCTaGCTGCGCGCGGTTCGCTCCGGGGGAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SGGSVSLLALQG*LRAVRSGGGRR
Trigger: CCTCCTCCCTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CCA 72 bp GCGGCCTCACCTCCTCCGGGGGCTCGGTTAGCCTCCTaGCGCTGCAAGGCTGCCTGCGCGCGGTTCGCTCCG +
Preference number: 6 (lower is better)
Translates to: AASPPPGARLAS*RCKAACARFAP
Trigger: CGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGGTGAGGCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS GCA 72 bp GACGGGGTCATCAGGCGGCACCAGGACTGTGAGGCGTaGGGGGCGGGAGCGGATGGCGGCCTGGATGGCCTG +
Preference number: 6 (lower is better)
Translates to: DGVIRRHQDCEA*GAGADGGLDGL
Trigger: CAGGCCATCCAGGCCGCCATCCGCTCCCGCCCCGCACGCCTCACAGTCCTGGTGCCGCCTGATGACCCCGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 72 bp TCACCTCCTCCGGGGGCTCGGTTAGCCTCCTGGCGCTaGAAGGCTGCCTGCGCGCGGTTCGCTCCGGGGGAG +
Preference number: 6 (lower is better)
Translates to: SPPPGARLASWR*KAACARFAPGE
Trigger: CTCCCCCGGAGCGAACCGCGCGCAGGCAGCCTTGCAGCGCCAGGAGGCTAACCGAGCCCCCGGAGGAGGTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CCA 72 bp TCACTGAAGCTGCAGGACCCACAGCCGGTCGGGCTCTaGCGCCAGCCTCGACGGCGGCCCCGCCATCTCCGC +
Preference number: 6 (lower is better)
Translates to: SLKLQDPQPVGL*RQPRRRPRHLR
Trigger: GCGGAGATGGCGGGGCCGCCGTCGAGGCTGGCGCCAGAGCCCGACCGGCTGTGGGTCCTGCAGCTTCAGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CCA 72 bp CGTGCGGGGCGGGAGCGGATGGCGGCCTGGATGGCCTaGCACTCGTACACCGCATCGTCTTGCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RAGRERMAAWMA*HSYTASSCSSA
Trigger: GGCAGAGCTGCAAGACGATGCGGTGTACGAGTGCCAGGCCATCCAGGCCGCCATCCGCTCCCGCCCCGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp GACCAGGCGATGCGGTCCGGCGGCGGCGTGCTCCGGATGAAGCACTaGATCTGGCCCTTCTCGCCGTGGAGGGCGTGCTGGGTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: DQAMRSGGGVLRMKH*IWPFSPWRACWVWV
Trigger: CACCCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAGCACGCCGCCGCCGGACCGCATCGCCTGGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000526519.5
ENST00000526764.1
ENST00000529097.6
ENST00000532647.1
CDS CAA 90 bp CTCTCCCCGGCTCCCACACGGGGCACCACAGCCCGGCACACGTACTaGCCCGCGTCCTCCTGGCGCACGGATTTGAGGGTCAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LSPAPTRGTTARHTY*PASSWRTDLRVRVF
Trigger: GAAGACCCTGACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGCTGTGGTGCCCCGTGTGGGAGCCGGGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp TCCGGCGGCGGCGTGCTCCGGATGAAGCACTTGATCTaGCCCTTCTCGCCGTGGAGGGCGTGCTGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SGGGVLRMKHLI*PFSPWRACWVW
Trigger: CCAGACCCAGCACGCCCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAGCACGCCGCCGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000526519.5
ENST00000526764.1
ENST00000529097.6
ENST00000532647.1
CDS CAA 72 bp GCTCCCACACGGGGCACCACAGCCCGGCACACGTACTaGCCCGCGTCCTCCTGGCGCACGGATTTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: APTRGTTARHTY*PASSWRTDLRV
Trigger: GACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGCTGTGGTGCCCCGTGTGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 72 bp ATGCGGTCCGGCGGCGGCGTGCTCCGGATGAAGCACTaGATCTGGCCCTTCTCGCCGTGGAGGGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: MRSGGGVLRMKH*IWPFSPWRACW
Trigger: CCAGCACGCCCTCCACGGCGAGAAGGGCCAGATCAAGTGCTTCATCCGGAGCACGCCGCCGCCGGACCGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000526519.5
ENST00000526764.1
ENST00000529097.6
ENST00000532647.1
CDS TCA 72 bp GGCGGCCCTGGCCGCTCAGGGTGCTGTAGATGTTGGTaGAGGACATGCCTGTGGGCACACGCTGCTTGCCCG +
Preference number: 6 (lower is better)
Translates to: GGPGRSGCCRCW*RTCLWAHAACP
Trigger: CGGGCAAGCAGCGTGTGCCCACAGGCATGTCCTTCACCAACATCTACAGCACCCTGAGCGGCCAGGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 72 bp GTCCTCTCGGGTTCGCGCCTACCATCTGTCCGTCCGTaGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTGCCT +
Preference number: 6 (lower is better)
Translates to: VLSGSRLPSVRP*VPPGGFGLFVP
Trigger: AGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATGGTAGGCGCGAACCCGAGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp ATCCGCCGCTGCAGGGGTCGACTGGGGTCAGAGTTCTaGGACGAGGACTGGGAGTGGTGGGAGGAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: IRRCRGRLGSEF*DEDWEWWEEEA
Trigger: TGCTTCCTCCTCCCACCACTCCCAGTCCTCGTCCCAGAACTCTGACCCCAGTCGACCCCTGCAGCGGCGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CAA 72 bp GCTGCAGGCTTGGCATTGTCTGCGTGGCAGGTGAGGTaGAGAGGGTCCCCCGCACGCAGGCTGATCACAGGG +
Preference number: 6 (lower is better)
Translates to: AAGLALSAWQVR*RGSPARRLITG
Trigger: CCCTGTGATCAGCCTGCGTGCGGGGGACCCTCTCAACCTCACCTGCCACGCAGACAATGCCAAGCCTGCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp ACAGCCCGGCACACGTACTTGCCCGCGTCCTCCTGGCGCACGGATTaGAGGGTCAGGGTCTTCTCATTGCTCAGGACCACTCCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TARHTYLPASSWRTD*RVRVFSLLRTTPEP
Trigger: GGGCTCCGGAGTGGTCCTGAGCAATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGTGCCGGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 72 bp TCATCCGGGGCCCAAAGTAGACGTCAACCGTGCGGCTaGGGTTGGTGCTGCCCAGGGCGTTGGTCACCTCAC +
Preference number: 6 (lower is better)
Translates to: SSGAQSRRQPCG*GWCCPGRWSPH
Trigger: GTGAGGTGACCAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGTTGACGTCTACTTTGGGCCCCGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 72 bp TCCTGCTTGCCGCTGCTGCTGACGCTGCTGTCACACTaGGTGTCCAGGAAGGAGCTGCTGTCGCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: SCLPLLLTLLSH*VSRKELLSLRE
Trigger: CTCCCTCAGCGACAGCAGCTCCTTCCTGGACACGCAGTGTGACAGCAGCGTCAGCAGCAGCGGCAAGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 72 bp GCGCCTACCATCTGTCCGTCCGTGGGTCCCTCCGGGTaGCTTCGGTCTCTTTGTGCCTCTGGGTATCTGCAG +
Preference number: 6 (lower is better)
Translates to: APTICPSVGPSG*LRSLCASGYLQ
Trigger: CTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATGGTAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp CAGATGATGGAGGCTGCAGGCTTGGCATTGTCTGCGTaGCAGGTGAGGTTGAGAGGGTCCCCCGCACGCAGG +
Preference number: 6 (lower is better)
Translates to: QMMEAAGLALSA*QVRLRGSPARR
Trigger: CCTGCGTGCGGGGGACCCTCTCAACCTCACCTGCCACGCAGACAATGCCAAGCCTGCAGCCTCCATCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp TCCGGAGCCCCGCTTCATCCAGACGATGGTCAGGGATaGGTTGCCGGTCCAGGCGCAGCTGAAGATGGCATC +
Preference number: 6 (lower is better)
Translates to: SGAPLHPDDGQG*VAGPGAAEDGI
Trigger: GATGCCATCTTCAGCTGCGCCTGGACCGGCAACCCATCCCTGACCATCGTCTGGATGAAGCGGGGCTCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp GGGAGCCTCTCTGGAACTCCCGCTCACAAAGCTCGATaGACGAGCTGCCCATGCCCAGCACAAACCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GSLSGTPAHKAR*TSCPCPAQTAA
Trigger: GGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGCGGGAGTTCCAGAGAGGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CCA 72 bp AGACGTGAGTCTGCATCCGCCGCTGCAGGGGTCGACTaGGGTCAGAGTTCTGGGACGAGGACTGGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: RRESASAAAGVD*GQSSGTRTGSG
Trigger: ACCACTCCCAGTCCTCGTCCCAGAACTCTGACCCCAGTCGACCCCTGCAGCGGCGGATGCAGACTCACGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS CAA 72 bp CGGCGGGGTAACTTGGCTGTGGTTAGTTTCTCTTCCTaGGCGGCTCTCGGTGCTCAGCCTCCGCCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: RRGNLAVVSFSS*AALGAQPPPVL
Trigger: GAGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 90 bp ACCACTCCGGAGCCCCGCTTCATCCAGACGATGGTCAGGGATGGGTaGCCGGTCCAGGCGCAGCTGAAGATGGCATCAGAGCCCAGATCC +
Preference number: 6 (lower is better)
Translates to: TTPEPRFIQTMVRDG*PVQAQLKMASEPRS
Trigger: GGATCTGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCGGCAACCCATCCCTGACCATCGTCTGGATGAAGCGGGGCTCCGGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp AAGGAAAGCCGGCGGGGTAACTTGGCTGTGGTTAGTTTCTCTTCCTaGGCGGCTCTCGGTGCTCAGCCTCCGCCGGTCCTCTCGGGTTCG +
Preference number: 6 (lower is better)
Translates to: KESRRGNLAVVSFSS*AALGAQPPPVLSGS
Trigger: CGAACCCGAGAGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS TCA 72 bp CGATGGTCAGGGATGGGTTGCCGGTCCAGGCGCAGCTaGAGATGGCATCAGAGCCCAGATCCACGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: RWSGMGCRSRRS*RWHQSPDPRAR
Trigger: CCTTGCTCGTGGATCTGGGCTCTGATGCCATCTTCAGCTGCGCCTGGACCGGCAACCCATCCCTGACCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 72 bp AGGCACACGGCTTCCTCAGGCGGGCTCCTCCCACAGTaGGCGAGCGAGCTAGTGACGAGTGACAGAAGGACT +
Preference number: 6 (lower is better)
Translates to: RHTASSGGLLPQ*ASELVTSDRRT
Trigger: AGTCCTTCTGTCACTCGTCACTAGCTCGCTCGCTCACTGTGGGAGGAGCCCGCCTGAGGAAGCCGTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS GCA 72 bp GTCCGTGGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTaGCTCTGGGTATCTGCAGCCAGCCGACACAAACTG +
Preference number: 6 (lower is better)
Translates to: VRGSLRVASVSL*LWVSAASRHKL
Trigger: CAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 72 bp ACTCCCGCTCACAAAGCTCGATGGACGAGCTGCCCATaGCCAGCACAAACCGCTGCCCGTAGTCGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: TPAHKARWTSCP*PAQTAARSRRG
Trigger: GCCTCTACGACTACGGGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGCGGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 72 bp CAGCGTCCCATTAGGCACCCGGGAAGGGCACGTCCCTaGTGGCGCCCTCTTGGGTGGGTTCAGAAGTGTATT +
Preference number: 6 (lower is better)
Translates to: QRPIRHPGRARP*WRPLGWVQKCI
Trigger: AATACACTTCTGAACCCACCCAAGAGGGCGCCAGCAGGGACGTGCCCTTCCCGGGTGCCTAATGGGACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CCA 72 bp GGCGGGGTAACTTGGCTGTGGTTAGTTTCTCTTCCTTaGCGGCTCTCGGTGCTCAGCCTCCGCCGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: GGVTWLWLVSLP*RLSVLSLRRSS
Trigger: AGAGGACCGGCGGAGGCTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp CTGGCCCCGCTTGGCCCACCTGTACTGGGTGACAGCTaGGTTGGCCTTTGCAGAGCAGTGGAAAGTGACGAC +
Preference number: 6 (lower is better)
Translates to: LAPLGPPVLGDS*VGLCRAVESDD
Trigger: GTCGTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAAGCGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp CTCCCTGAGATCCCGGATCTCCCTCCCGTACTTCTCTaGGAACGGGCACAGCAGAACGCCACGATGGTTGCC +
Preference number: 6 (lower is better)
Translates to: LPEIPDLPPVLL*ERAQQNATMVA
Trigger: GGCAACCATCGTGGCGTTCTGCTGTGCCCGTTCCCAGAGAAGTACGGGAGGGAGATCCGGGATCTCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525704.2
CDS CAA 72 bp TCCGTCCGTGGGTCCCTCCGGGTGGCTTCGGTCTCTTaGTGCCTCTGGGTATCTGCAGCCAGCCGACACAAA +
Preference number: 6 (lower is better)
Translates to: SVRGSLRVASVS*CLWVSAASRHK
Trigger: TTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 72 bp GGCCTGGATGGCCTGGCACTCGTACACCGCATCGTCTaGCAGCTCTGCCCTCAGGATCTTCAGGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: GLDGLALVHRIV*QLCPQDLQVVL
Trigger: GAGCACCACCTGAAGATCCTGAGGGCAGAGCTGCAAGACGATGCGGTGTACGAGTGCCAGGCCATCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 72 bp TCAACCGTGCGGCTGAGGTTGGTGCTGCCCAGGGCGTaGGTCACCTCACAGGAGACGGGCTCTGAGAAGTAC +
Preference number: 6 (lower is better)
Translates to: STVRLRLVLPRA*VTSQETGSEKY
Trigger: GTACTTCTCAGAGCCCGTCTCCTGTGAGGTGACCAACGCCCTGGGCAGCACCAACCTCAGCCGCACGGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 72 bp CGAACTGCACATAGCCATCCTGCTTGCCGCTGCTGCTaGCGCTGCTGTCACACTGCGTGTCCAGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: RTAHSHPACRCC*RCCHTACPGRS
Trigger: GCTCCTTCCTGGACACGCAGTGTGACAGCAGCGTCAGCAGCAGCGGCAAGCAGGATGGCTATGTGCAGTTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 72 bp TCACCCCGGTCCATCATCAGCTGCTTGATGGTGGAGTaGTCCTCACCCTCCCGACCAGAGGCTGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: SPRSIISCLMVE*SSPSRPEAGSL
Trigger: CAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTCCACCATCAAGCAGCTGATGATGGACCGGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 72 bp TCTGGAACTCCCGCTCACAAAGCTCGATGGACGAGCTaGCCATGCCCAGCACAAACCGCTGCCCGTAGTCGT +
Preference number: 6 (lower is better)
Translates to: SGTPAHKARWTS*PCPAQTAARSR
Trigger: ACGACTACGGGCAGCGGTTTGTGCTGGGCATGGGCAGCTCGTCCATCGAGCTTTGTGAGCGGGAGTTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525144.7
ENST00000529097.6
CDS GCA 72 bp CCCGGTGCAGTTGACATAGTGGAGACCCCAGGATCTTaGCAGTGGCTGCTGTCCAAGTCACTGGGTCCCCTC +
Preference number: 6 (lower is better)
Translates to: PGAVDIVETPGS*QWLLSKSLGPL
Trigger: GAGGGGACCCAGTGACTTGGACAGCAGCCACTGGCAAGATCCTGGGGTCTCCACTATGTCAACTGCACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GGGTCCCTCCGGGTGGCTTCGGTCTCTTTGTGCCTCTaGGTATCTGCAGCCAGCCGACACAAACTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: GSLRVASVSLCL*VSAASRHKLPV
Trigger: AACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GCGCAGCGAAGGAAAGCCGGCGGGGTAACTTGGCTGTaGTTAGTTTCTCTTCCTTGGCGGCTCTCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: AQRRKAGGVTWL*LVSLPWRLSVL
Trigger: GAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GTGGAAAGTGACGACGTTGTCCTCCAGCACTGGCTGTaGCTCCACCGAGAGGTTGACCAGTGGAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VESDDVVLQHWL*LHREVDQWRVL
Trigger: CAGCACCCTCCACTGGTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp CGTCCCATTAGGCACCCGGGAAGGGCACGTCCCTGCTaGCGCCCTCTTGGGTGGGTTCAGAAGTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: RPIRHPGRARPC*RPLGWVQKCIH
Trigger: ATGAATACACTTCTGAACCCACCCAAGAGGGCGCCAGCAGGGACGTGCCCTTCCCGGGTGCCTAATGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CAA 90 bp TACCATCTGTCCGTCCGTGGGTCCCTCCGGGTGGCTTCGGTCTCTTaGTGCCTCTGGGTATCTGCAGCCAGCCGACACAAACTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: YHLSVRGSLRVASVS*CLWVSAASRHKLPV
Trigger: AACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACAAAGAGACCGAAGCCACCCGGAGGGACCCACGGACGGACAGATGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS TCA 72 bp AGAGGTCCCTGCCCACACCCAGAGCCAAGCCGTCCTTaGTCCACAGAACGAAGCCATCGTATTCGGGGATGG +
Preference number: 6 (lower is better)
Translates to: RGPCPHPEPSRP*STERSHRIRGW
Trigger: CCATCCCCGAATACGATGGCTTCGTTCTGTGGATCAAGGACGGCTTGGCTCTGGGTGTGGGCAGGGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 72 bp GCCCAGGGCGTTGGTCACCTCACAGGAGACGGGCTCTaGGAAGTACGTGTAGTCCACTGTGGTCCTGTACAC +
Preference number: 6 (lower is better)
Translates to: AQGVGHLTGDGL*EVRVVHCGPVH
Trigger: GTGTACAGGACCACAGTGGACTACACGTACTTCTCAGAGCCCGTCTCCTGTGAGGTGACCAACGCCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS TCA 72 bp ACACGTACTTGCCCGCGTCCTCCTGGCGCACGGATTTaGGGGTCAGGGTCTTCTCATTGCTCAGGACCACTC +
Preference number: 6 (lower is better)
Translates to: TRTCPRPPGARI*GSGSSHCSGPL
Trigger: GAGTGGTCCTGAGCAATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 72 bp TGTGCCTCTGGGTATCTGCAGCCAGCCGACACAAACTaGCTGTTCTTAGCCGCCTCGGGAAGCCGGGATTGT +
Preference number: 6 (lower is better)
Translates to: CASGYLQPADTN*LFLAASGSRDC
Trigger: ACAATCCCGGCTTCCCGAGGCGGCTAAGAACAGGCAGTTTGTGTCGGCTGGCTGCAGATACCCAGAGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 72 bp GGCCCACCTGTACTGGGTGACAGCTGGGTTGGCCTTTaGAGAGCAGTGGAAAGTGACGACGTTGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GPPVLGDSWVGL*RAVESDDVVLQ
Trigger: CTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 72 bp CGTGTAGTCCACTGTGGTCCTGTACACCTCTCCAGATaGCTCCTTGATGATCTGGCCCCGCTTGGCCCACCT +
Preference number: 6 (lower is better)
Translates to: RVVHCGPVHLSR*LLDDLAPLGPP
Trigger: AGGTGGGCCAAGCGGGGCCAGATCATCAAGGAGGCATCTGGAGAGGTGTACAGGACCACAGTGGACTACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS GCA 72 bp TCTCTGGGAACGGGCACAGCAGAACGCCACGATGGTTaGCATAAGGACGAGGAAGGCCACACCAGCTCCTAC +
Preference number: 6 (lower is better)
Translates to: SLGTGTAERHDG*HKDEEGHTSSY
Trigger: GTAGGAGCTGGTGTGGCCTTCCTCGTCCTTATGGCAACCATCGTGGCGTTCTGCTGTGCCCGTTCCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CCA 72 bp CCGACGTCTCCTTTCCTCCGGGGATGGCTTTGTTGGTaGCACGACACACGATGCTCTGGCCATTCTCCACGT +
Preference number: 6 (lower is better)
Translates to: PTSPFLRGWLCW*HDTRCSGHSPR
Trigger: ACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGGAGACGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp AGAGCAGTGGAAAGTGACGACGTTGTCCTCCAGCACTaGCTGTGGCTCCACCGAGAGGTTGACCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: RAVESDDVVLQH*LWLHREVDQWR
Trigger: CCTCCACTGGTCAACCTCTCGGTGGAGCCACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 72 bp GTGACCGACGTCTCCTTTCCTCCGGGGATGGCTTTGTaGGTGGCACGACACACGATGCTCTGGCCATTCTCC +
Preference number: 6 (lower is better)
Translates to: VTDVSFPPGMAL*VARHTMLWPFS
Trigger: GGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGGAGACGTCGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 72 bp CACACGTACTTGCCCGCGTCCTCCTGGCGCACGGATTaGAGGGTCAGGGTCTTCTCATTGCTCAGGACCACT +
Preference number: 6 (lower is better)
Translates to: HTYLPASSWRTD*RVRVFSLLRTT
Trigger: AGTGGTCCTGAGCAATGAGAAGACCCTGACCCTCAAATCCGTGCGCCAGGAGGACGCGGGCAAGTACGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 72 bp GGCACCCGGGAAGGGCACGTCCCTGCTGGCGCCCTCTaGGGTGGGTTCAGAAGTGTATTCATTAATCCAAGC +
Preference number: 6 (lower is better)
Translates to: GTREGHVPAGAL*GGFRSVFINPS
Trigger: GCTTGGATTAATGAATACACTTCTGAACCCACCCAAGAGGGCGCCAGCAGGGACGTGCCCTTCCCGGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CAA 90 bp GGCGCAGCTGAAGATGGCATCAGAGCCCAGATCCACGAGCAAGGATaGGGGTTCTGTGGTCATCCGGGGCCCAAAGTAGACGTCAACCGT +
Preference number: 6 (lower is better)
Translates to: GAAEDGIRAQIHEQG*GFCGHPGPKVDVNR
Trigger: ACGGTTGACGTCTACTTTGGGCCCCGGATGACCACAGAACCCCAATCCTTGCTCGTGGATCTGGGCTCTGATGCCATCTTCAGCTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp ATTGTCAGCAATGTCCCCACTCGGAGAAGATCCATTCTCTGGCTCTaGGCATCCCAGGCACACGGCTTCCTCAGGCGGGCTCCTCCCACA +
Preference number: 6 (lower is better)
Translates to: IVSNVPTRRRSILWL*ASQAHGFLRRAPPT
Trigger: TGTGGGAGGAGCCCGCCTGAGGAAGCCGTGTGCCTGGGATGCCAAGAGCCAGAGAATGGATCTTCTCCGAGTGGGGACATTGCTGACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS CCA 72 bp TCCTTAGCGCAGCGAAGGAAAGCCGGCGGGGTAACTTaGCTGTGGTTAGTTTCTCTTCCTTGGCGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SLAQRRKAGGVT*LWLVSLPWRLS
Trigger: CGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GGGATGGCTTTGTTGGTGGCACGACACACGATGCTCTaGCCATTCTCCACGTCACCAGGGGAGATGAAGAGG +
Preference number: 6 (lower is better)
Translates to: GMALLVARHTML*PFSTSPGEMKR
Trigger: CCTCTTCATCTCCCCTGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp GCACCCGGGAAGGGCACGTCCCTGCTGGCGCCCTCTTaGGTGGGTTCAGAAGTGTATTCATTAATCCAAGCA +
Preference number: 6 (lower is better)
Translates to: APGKGTSLLAPS*VGSEVYSLIQA
Trigger: TGCTTGGATTAATGAATACACTTCTGAACCCACCCAAGAGGGCGCCAGCAGGGACGTGCCCTTCCCGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CCA 72 bp GTAAAGCTAGAATGCGAAAACTGCAGCCTCCTGGGGTaGAAGCGGTGTGGCGTTTGGAGAGCCTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VKLECENCSLLG*KRCGVWRAWLR
Trigger: CCTCAGCCAGGCTCTCCAAACGCCACACCGCTTCCACCCCAGGAGGCTGCAGTTTTCGCATTCTAGCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GCAGTTGACATAGTGGAGACCCCAGGATCTTGCCAGTaGCTGCTGTCCAAGTCACTGGGTCCCCTCGTCATC +
Preference number: 6 (lower is better)
Translates to: AVDIVETPGSCQ*LLSKSLGPLVI
Trigger: GATGACGAGGGGACCCAGTGACTTGGACAGCAGCCACTGGCAAGATCCTGGGGTCTCCACTATGTCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 72 bp ATGGTGACCGACGTCTCCTTTCCTCCGGGGATGGCTTaGTTGGTGGCACGACACACGATGCTCTGGCCATTC +
Preference number: 6 (lower is better)
Translates to: MVTDVSFPPGMA*LVARHTMLWPF
Trigger: GAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGGAGACGTCGGTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp AGGGTTTCATTCCTTAGCGCAGCGAAGGAAAGCCGGCGGGGTAACTaGGCTGTGGTTAGTTTCTCTTCCTTGGCGGCTCTCGGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RVSFLSAAKESRRGN*AVVSFSSLAALGAQ
Trigger: CTGAGCACCGAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGCTAAGGAATGAAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 90 bp ATGTCAATGGTGACCGACGTCTCCTTTCCTCCGGGGATGGCTTTGTaGGTGGCACGACACACGATGCTCTGGCCATTCTCCACGTCACCA +
Preference number: 6 (lower is better)
Translates to: MSMVTDVSFPPGMAL*VARHTMLWPFSTSP
Trigger: TGGTGACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGGAGACGTCGGTCACCATTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp TGGATGTCAATGGTGACCGACGTCTCCTTTCCTCCGGGGATGGCTTaGTTGGTGGCACGACACACGATGCTCTGGCCATTCTCCACGTCA +
Preference number: 6 (lower is better)
Translates to: WMSMVTDVSFPPGMA*LVARHTMLWPFSTS
Trigger: TGACGTGGAGAATGGCCAGAGCATCGTGTGTCGTGCCACCAACAAAGCCATCCCCGGAGGAAAGGAGACGTCGGTCACCATTGACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CAA 90 bp AGCCGACACAAACTGCCTGTTCTTAGCCGCCTCGGGAAGCCGGGATaGTCAGCAATGTCCCCACTCGGAGAAGATCCATTCTCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: SRHKLPVLSRLGKPG*SAMSPLGEDPFSGS
Trigger: AGAGCCAGAGAATGGATCTTCTCCGAGTGGGGACATTGCTGACAATCCCGGCTTCCCGAGGCGGCTAAGAACAGGCAGTTTGTGTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
CDS CAA 90 bp GCCTGGCTGAGGAGCTGCCCACCGCCTCGGCAGGCTGCAAGTTTCTaGTCTTTGGAGGGATTCAAGCATAGGTTGCAACAGCCTCTTAGA +
Preference number: 6 (lower is better)
Translates to: AWLRSCPPPRQAASF*SLEGFKHRLQQPLR
Trigger: TCTAAGAGGCTGTTGCAACCTATGCTTGAATCCCTCCAAAGACAAGAAACTTGCAGCCTGCCGAGGCGGTGGGCAGCTCCTCAGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS TCA 72 bp AAGCAGAGAGAAGAAAGGAGGCCTCCCCGGTGCAGTTaGCATAGTGGAGACCCCAGGATCTTGCCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: KQREERRPPRCS*HSGDPRILPVA
Trigger: AGCCACTGGCAAGATCCTGGGGTCTCCACTATGTCAACTGCACCGGGGAGGCCTCCTTTCTTCTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp TACTGGGTGACAGCTGGGTTGGCCTTTGCAGAGCAGTaGAAAGTGACGACGTTGTCCTCCAGCACTGGCTGT +
Preference number: 6 (lower is better)
Translates to: YWVTAGLAFAEQ*KVTTLSSSTGC
Trigger: ACAGCCAGTGCTGGAGGACAACGTCGTCACTTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp GAGCACAGGGCCCGGCACTGTGACATGAGCACTCTGTaGAGGTGGGGCAAGCTCCTTCAGGTTTTTATTGAC +
Preference number: 6 (lower is better)
Translates to: EHRARHCDMSTL*RWGKLLQVFID
Trigger: GTCAATAAAAACCTGAAGGAGCTTGCCCCACCTCCACAGAGTGCTCATGTCACAGTGCCGGGCCCTGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533026.6
CDS CAA 72 bp TTCCTTAGCGCAGCGAAGGAAAGCCGGCGGGGTAACTaGGCTGTGGTTAGTTTCTCTTCCTTGGCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: FLSAAKESRRGN*AVVSFSSLAAL
Trigger: GAGAGCCGCCAAGGAAGAGAAACTAACCACAGCCAAGTTACCCCGCCGGCTTTCCTTCGCTGCGCTAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 90 bp GTCCCATTAGGCACCCGGGAAGGGCACGTCCCTGCTGGCGCCCTCTaGGGTGGGTTCAGAAGTGTATTCATTAATCCAAGCATTCAGCAA +
Preference number: 6 (lower is better)
Translates to: VPLGTREGHVPAGAL*GGFRSVFINPSIQQ
Trigger: TTGCTGAATGCTTGGATTAATGAATACACTTCTGAACCCACCCAAGAGGGCGCCAGCAGGGACGTGCCCTTCCCGGGTGCCTAATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CAA 72 bp AAACTGCCTGTTCTTAGCCGCCTCGGGAAGCCGGGATaGTCAGCAATGTCCCCACTCGGAGAAGATCCATTC +
Preference number: 6 (lower is better)
Translates to: KLPVLSRLGKPG*SAMSPLGEDPF
Trigger: GAATGGATCTTCTCCGAGTGGGGACATTGCTGACAATCCCGGCTTCCCGAGGCGGCTAAGAACAGGCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 72 bp AGGAGCTGCCCACCGCCTCGGCAGGCTGCAAGTTTCTaGTCTTTGGAGGGATTCAAGCATAGGTTGCAACAG +
Preference number: 6 (lower is better)
Translates to: RSCPPPRQAASF*SLEGFKHRLQQ
Trigger: CTGTTGCAACCTATGCTTGAATCCCTCCAAAGACAAGAAACTTGCAGCCTGCCGAGGCGGTGGGCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp GATGGTGGAGTGCTCCTCACCCTCCCGACCAGAGGCTaGTTCCTTGTGGACAATTTCCACTCGGATATCATT +
Preference number: 6 (lower is better)
Translates to: DGGVLLTLPTRG*FLVDNFHSDII
Trigger: AATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTCCACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS TCA 72 bp CGCCAGGCACAGAGCGGGTACTGGACACATGGTTGGTaGATAAATGAGCATTCCGCCGTGTTCACAGTCTTT +
Preference number: 6 (lower is better)
Translates to: RQAQSGYWTHGW*INEHSAVFTVF
Trigger: AAAGACTGTGAACACGGCGGAATGCTCATTTATTCACCAACCATGTGTCCAGTACCCGCTCTGTGCCTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp TGCTCCTCACCCTCCCGACCAGAGGCTGGTTCCTTGTaGACAATTTCCACTCGGATATCATTTTTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: CSSPSRPEAGSL*TISTRISFLAD
Trigger: GTCAGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CAA 72 bp GAGTGCTCCTCACCCTCCCGACCAGAGGCTGGTTCCTaGTGGACAATTTCCACTCGGATATCATTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: ECSSPSRPEAGS*WTISTRISFLA
Trigger: AGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CAA 90 bp TTGATGGTGGAGTGCTCCTCACCCTCCCGACCAGAGGCTGGTTCCTaGTGGACAATTTCCACTCGGATATCATTTTTGGCTGACACAACA +
Preference number: 6 (lower is better)
Translates to: LMVECSSPSRPEAGS*WTISTRISFLADTT
Trigger: TGTTGTGTCAGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGGTCGGGAGGGTGAGGAGCACTCCACCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CAA 90 bp CTGAGGAGCTGCCCACCGCCTCGGCAGGCTGCAAGTTTCTTGTCTTaGGAGGGATTCAAGCATAGGTTGCAACAGCCTCTTAGAATAAAA +
Preference number: 6 (lower is better)
Translates to: LRSCPPPRQAASFLS*EGFKHRLQQPLRIK
Trigger: TTTTATTCTAAGAGGCTGTTGCAACCTATGCTTGAATCCCTCCAAAGACAAGAAACTTGCAGCCTGCCGAGGCGGTGGGCAGCTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp AGACTTGGCCTTCATTCATTCTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCAGACAGCATCCTCTCT +
Preference number: 6 (lower is better)
Translates to: RLGLHSFSETCP*PCSPAPDSILS
Trigger: AGAGAGGATGCTGTCTGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGGCCAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525144.7
ENST00000525704.2
ENST00000529097.6
CDS CCA 72 bp ACTCCGTCTCTTCATTCATTCTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCAGACAGCATCCTCTCT +
Preference number: 6 (lower is better)
Translates to: TPSLHSFSETCP*PCSPAPDSILS
Trigger: AGAGAGGATGCTGTCTGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGAGACGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS CCA 72 bp CGTCTCTGTCTTCATTCATTCTCCGAAACTTGTCCTTaGCCATGTAGCCCAGCACCAGACAGCATCCTCTCT +
Preference number: 6 (lower is better)
Translates to: RLCLHSFSETCP*PCSPAPDSILS
Trigger: AGAGAGGATGCTGTCTGGTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGACAGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549874.1
CDS CCA 72 bp CTGGTACTTGGCAGGGATATGGAACCAGATGACCTTTaGTCCCTTCTGGCCTGGAGAATCTGTAATGATAGG +
Preference number: 6 (lower is better)
Translates to: LVLGRDMEPDDL*SLLAWRICNDR
Trigger: CCTATCATTACAGATTCTCCAGGCCAGAAGGGACCAAAGGTCATCTGGTTCCATATCCCTGCCAAGTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CCA 72 bp ACCTGCTCATTCCAGCGCACGGCTCTAAAAACTTTATaGCACCGCAAGCCATTAAGCGCCTTCGTTTATTCC +
Preference number: 6 (lower is better)
Translates to: TCSFQRTALKTL*HRKPLSAFVYS
Trigger: GGAATAAACGAAGGCGCTTAATGGCTTGCGGTGCCATAAAGTTTTTAGAGCCGTGCGCTGGAATGAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533026.6
ENST00000547738.5
CDS CAA 90 bp CCAGAGGCTGGTTCCTTGTGGACAATTTCCACTCGGATATCATTTTaGGCTGACACAACACCTTTGAGATTTCTCTGGGAACGGGCACAG +
Preference number: 6 (lower is better)
Translates to: PEAGSLWTISTRISF*ADTTPLRFLWERAQ
Trigger: CTGTGCCCGTTCCCAGAGAAATCTCAAAGGTGTTGTGTCAGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACCAGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS TCA 72 bp ACAGAGCGGGTACTGGACACATGGTTGGTGAATAAATaGGCATTCCGCCGTGTTCACAGTCTTTACACACAC +
Preference number: 6 (lower is better)
Translates to: TERVLDTWLVNK*AFRRVHSLYTH
Trigger: GTGTGTGTAAAGACTGTGAACACGGCGGAATGCTCATTTATTCACCAACCATGTGTCCAGTACCCGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS TCA 72 bp TGGAGAATCTGTAATGATAGGGGTCTAAGCCTGCCCTaGCTACACCCGGGATTTGAATCTAGATTTCTCCTA +
Preference number: 6 (lower is better)
Translates to: WRICNDRGLSLP*LHPGFESRFLL
Trigger: TAGGAGAAATCTAGATTCAAATCCCGGGTGTAGTCAGGGCAGGCTTAGACCCCTATCATTACAGATTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS GCA 72 bp CAAGCATTCAGCAAACATTTGCCGAAGGCCTGTATGTaGAAGGTAAAGTGCAAGGTAGAGGACTCAGAGATA +
Preference number: 6 (lower is better)
Translates to: QAFSKHLPKACM*KVKCKVEDSEI
Trigger: TATCTCTGAGTCCTCTACCTTGCACTTTACCTTGCACATACAGGCCTTCGGCAAATGTTTGCTGAATGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CAA 90 bp GTGGGTTCAGAAGTGTATTCATTAATCCAAGCATTCAGCAAACATTaGCCGAAGGCCTGTATGTGCAAGGTAAAGTGCAAGGTAGAGGAC +
Preference number: 6 (lower is better)
Translates to: VGSEVYSLIQAFSKH*PKACMCKVKCKVED
Trigger: GTCCTCTACCTTGCACTTTACCTTGCACATACAGGCCTTCGGCAAATGTTTGCTGAATGCTTGGATTAATGAATACACTTCTGAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526764.1
CDS CAA 90 bp CGGCAGGCTGCAAGTTTCTTGTCTTTGGAGGGATTCAAGCATAGGTaGCAACAGCCTCTTAGAATAAAACATCTCACAGGGCTTATTTCT +
Preference number: 6 (lower is better)
Translates to: RQAASFLSLEGFKHR*QQPLRIKHLTGLIS
Trigger: AGAAATAAGCCCTGTGAGATGTTTTATTCTAAGAGGCTGTTGCAACCTATGCTTGAATCCCTCCAAAGACAAGAAACTTGCAGCCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1
CDS CAA 72 bp GGTTCCTTGTGGACAATTTCCACTCGGATATCATTTTaGGCTGACACAACACCTTTGAGATTTCTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GSLWTISTRISF*ADTTPLRFLWE
Trigger: TTCCCAGAGAAATCTCAAAGGTGTTGTGTCAGCCAAAAATGATATCCGAGTGGAAATTGTCCACAAGGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525144.7
ENST00000526519.5
ENST00000529097.6
ENST00000532647.1
CDS CAA 72 bp GCAAGTTTCTTGTCTTTGGAGGGATTCAAGCATAGGTaGCAACAGCCTCTTAGAATAAAACATCTCACAGGG +
Preference number: 6 (lower is better)
Translates to: ASFLSLEGFKHR*QQPLRIKHLTG
Trigger: CCCTGTGAGATGTTTTATTCTAAGAGGCTGTTGCAACCTATGCTTGAATCCCTCCAAAGACAAGAAACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533026.6
ENST00000547738.5
ENST00000549874.1