Pregenerated sensors for KIRREL1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000226520Ensembl transcript IDs: ENST00000419415.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGGAGAGGAGGGGACTCTTTCCCAGGCAGCAGCCTCGATGCTACTaGGCTGTTTGCTGGCTCCATCTTAGAGAAGTCTTAATGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: GERRGLFPRQQPRCY*AVCWLHLREVLMRH Trigger: ATGTCTCATTAAGACTTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAAGAGTCCCCTCCTCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CCA 90 bp | TGCTTCTCCTCTTCGGTGCTGCTCTTGGCTGCATCTCTTCCCGCCTaGCCTCGTCTTGCTCTGTTTATCTTCTCTCCTCTCTCTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CFSSSVLLLAASLPA*PRLALFIFSPLSLL Trigger: AAGAAGAGAGAGAGGAGAGAAGATAAACAGAGCAAGACGAGGCCAGGCGGGAAGAGATGCAGCCAAGAGCAGCACCGAAGAGGAGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS GCA 90 bp | AGGGGACTCTTTCCCAGGCAGCAGCCTCGATGCTACTGGGCTGTTTaGTGGCTCCATCTTAGAGAAGTCTTAATGAGACATGTCTTAACA | + |
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Preference number: 5 (lower is better) Translates to: RGLFPRQQPRCYWAV*WLHLREVLMRHVLT Trigger: TGTTAAGACATGTCTCATTAAGACTTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAAGAGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CCA 90 bp | CAATGGGATTATCGTCCACTTTGGACCAGGATGAGCAGATGGAGCTaGGATTTGATGATGGGATGTTCAGTGCAACATGAGTCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: QWDYRPLWTRMSRWS*DLMMGCSVQHESAL Trigger: GAGTGCTGACTCATGTTGCACTGAACATCCCATCATCAAATCCCAGCTCCATCTGCTCATCCTGGTCCAAAGTGGACGATAATCCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CCA 90 bp | GGACTCTTTCCCAGGCAGCAGCCTCGATGCTACTGGGCTGTTTGCTaGCTCCATCTTAGAGAAGTCTTAATGAGACATGTCTTAACAATG | + |
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Preference number: 5 (lower is better) Translates to: GLFPRQQPRCYWAVC*LHLREVLMRHVLTM Trigger: CATTGTTAAGACATGTCTCATTAAGACTTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAAGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS TCA 90 bp | GCTGGACAGCCTCTACCACATAGGACAGGTACTCCAGCTACTGGATaGAATTCCAGGTATGAGACTACTTCTTTCTGGTTTTCTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: AGQPLPHRTGTPATG*NSRYETTSFWFSHL Trigger: CAGGTGAGAAAACCAGAAAGAAGTAGTCTCATACCTGGAATTTCATCCAGTAGCTGGAGTACCTGTCCTATGTGGTAGAGGCTGTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS GCA 72 bp | GAGAGGAGGGGACTCTTTCCCAGGCAGCAGCCTCGATaGTACTGGGCTGTTTGCTGGCTCCATCTTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: ERRGLFPRQQPR*YWAVCWLHLRE Trigger: TTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAAGAGTCCCCTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CCA 72 bp | TCTTCGGTGCTGCTCTTGGCTGCATCTCTTCCCGCCTaGCCTCGTCTTGCTCTGTTTATCTTCTCTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSVLLLAASLPA*PRLALFIFSPL Trigger: GAGAGGAGAGAAGATAAACAGAGCAAGACGAGGCCAGGCGGGAAGAGATGCAGCCAAGAGCAGCACCGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CCA 72 bp | AGGGGACTCTTTCCCAGGCAGCAGCCTCGATGCTACTaGGCTGTTTGCTGGCTCCATCTTAGAGAAGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: RGLFPRQQPRCY*AVCWLHLREVL Trigger: TAAGACTTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAAGAGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS GCA 72 bp | GCTCTTGGCTGCATCTCTTCCCGCCTGGCCTCGTCTTaGTCTGTTTATCTTCTCTCCTCTCTCTCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALGCISSRLASS*SVYLLSSLSSF Trigger: GAAAGAAGAGAGAGAGGAGAGAAGATAAACAGAGCAAGACGAGGCCAGGCGGGAAGAGATGCAGCCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CAA 72 bp | AACATGAGTCAGCACTCACACCTACTCCTGGGGATCTaGACTCTGGGTACCAAATCCAGAGAGGGGGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: NMSQHSHLLLGI*TLGTKSREGVH Trigger: ATGCACCCCCTCTCTGGATTTGGTACCCAGAGTCAAGATCCCCAGGAGTAGGTGTGAGTGCTGACTCATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS GCA 72 bp | TTTCCCAGGCAGCAGCCTCGATGCTACTGGGCTGTTTaGTGGCTCCATCTTAGAGAAGTCTTAATGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: FPRQQPRCYWAV*WLHLREVLMRH Trigger: ATGTCTCATTAAGACTTCTCTAAGATGGAGCCAGCAAACAGCCCAGTAGCATCGAGGCTGCTGCCTGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CAA 90 bp | GATTATCGTCCACTTTGGACCAGGATGAGCAGATGGAGCTGGGATTaGATGATGGGATGTTCAGTGCAACATGAGTCAGCACTCACACCT | + |
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Preference number: 6 (lower is better) Translates to: DYRPLWTRMSRWSWD*MMGCSVQHESALTP Trigger: AGGTGTGAGTGCTGACTCATGTTGCACTGAACATCCCATCATCAAATCCCAGCTCCATCTGCTCATCCTGGTCCAAAGTGGACGATAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS TCA 72 bp | GACAGGTACTCCAGCTACTGGATGAAATTCCAGGTATaGGACTACTTCTTTCTGGTTTTCTCACCTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: DRYSSYWMKFQV*DYFFLVFSPAP Trigger: TGGAGCAGGTGAGAAAACCAGAAAGAAGTAGTCTCATACCTGGAATTTCATCCAGTAGCTGGAGTACCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS CAA 90 bp | GAAGTCTTAATGAGACATGTCTTAACAATGGGATTATCGTCCACTTaGGACCAGGATGAGCAGATGGAGCTGGGATTTGATGATGGGATG | + |
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Preference number: 6 (lower is better) Translates to: EVLMRHVLTMGLSST*DQDEQMELGFDDGM Trigger: CATCCCATCATCAAATCCCAGCTCCATCTGCTCATCCTGGTCCAAAGTGGACGATAATCCCATTGTTAAGACATGTCTCATTAAGACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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| CDS TCA 72 bp | CCTCTACCACATAGGACAGGTACTCCAGCTACTGGATaGAATTCCAGGTATGAGACTACTTCTTTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PLPHRTGTPATG*NSRYETTSFWF Trigger: AAACCAGAAAGAAGTAGTCTCATACCTGGAATTTCATCCAGTAGCTGGAGTACCTGTCCTATGTGGTAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419415.1 |
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