RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIRREL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183853

Ensembl transcript IDs: ENST00000359209.11, ENST00000360089.8, ENST00000368172.1, ENST00000368173.7

Found 1142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCTGTGCTTACTCCCCGACCTCTGGCTCCAGGCACCTTGGACTaGAGGCTTCACCTGTTTGGTGAGAAGAACAAGCTGTCCCTGGGC +
Preference number: 1 (lower is better)
Translates to: AAVLTPRPLAPGTLD*RLHLFGEKNKLSLG
Trigger: GCCCAGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAAGCACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp GGAACATTTTGGGAACTGCACCAGAGGCCCTGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGCGGGAAACAGCCAACTCCAGACACT +
Preference number: 1 (lower is better)
Translates to: GTFWELHQRPCLPLG*TCSWGGGKQPTPDT
Trigger: AGTGTCTGGAGTTGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACAGGGCCTCTGGTGCAGTTCCCAAAATGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp CAGGGGCAGCTGTGCTTACTCCCCGACCTCTGGCTCCAGGCACCTTaGACTGCAGGCTTCACCTGTTTGGTGAGAAGAACAAGCTGTCCC +
Preference number: 1 (lower is better)
Translates to: QGQLCLLPDLWLQAP*TAGFTCLVRRTSCP
Trigger: GGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAAGCACAGCTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp GGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCACCTTCTCCCGGTCAGCACAAGTTCT +
Preference number: 1 (lower is better)
Translates to: GCACTWRRRNGLCNA*GALPHHLLPVSTSS
Trigger: AGAACTTGTGCTGACCGGGAGAAGGTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp CCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTaGCAGCAATGGGCAGTCCCATCCCTACCCCCAACCCTATGGGTA +
Preference number: 1 (lower is better)
Translates to: PALQPSPCLLLFPVP*QQWAVPSLPPTLWV
Trigger: TACCCATAGGGTTGGGGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp GGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTaGATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGCCCCGCA +
Preference number: 1 (lower is better)
Translates to: GGRRLVREGSNEQCP*ISGNSCESLLLCPA
Trigger: TGCGGGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp AGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAG +
Preference number: 1 (lower is better)
Translates to: RQERTVPCSLPSAVP*GRREAPRARMQTTE
Trigger: CTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp GTCAATGAGGACATGGTCCTAGCCTTTCTTTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCC +
Preference number: 1 (lower is better)
Translates to: VNEDMVLAFLSPPGP*LIWLAQHGGEGKRA
Trigger: GGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGAAAGAAAGGCTAGGACCATGTCCTCATTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp CCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATA +
Preference number: 1 (lower is better)
Translates to: PTPILHVPRPKPAHP*VPPFPLMGDQRGGI
Trigger: TATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp GGGCAATTCTCAACATGCACAGTGGCCTGTAGAGGCACCAAGCAGTaGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGAT +
Preference number: 1 (lower is better)
Translates to: GQFSTCTVACRGTKQ*PGSGQTALTWGSQD
Trigger: ATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGAATTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp ACTGGGGAGAGGAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGTATCTGGGTCAATGAGGACATGGTC +
Preference number: 1 (lower is better)
Translates to: TGERRLVWLPLVLVH*CAAHSSIWVNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTCCTCTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp GCCAGGGTCAGGAGCTTCACTAATCCTTTTGGGCAATTCTCAACATaGACAGTGGCCTGTAGAGGCACCAAGCAGTGGCCTGGCTCAGGT +
Preference number: 1 (lower is better)
Translates to: ARVRSFTNPFGQFST*TVACRGTKQWPGSG
Trigger: ACCTGAGCCAGGCCACTGCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGCTCCTGACCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp TGGACTGCAGGCTTCACCTGTTTGGTGAGAAGAACAAGCTGTCCCTaGGCCAGAGGAATGTTCCTAAGGATCAGGGTGGAGGAAGGCTCC +
Preference number: 1 (lower is better)
Translates to: WTAGFTCLVRRTSCP*ARGMFLRIRVEEGS
Trigger: GGAGCCTTCCTCCACCCTGATCCTTAGGAACATTCCTCTGGCCCAGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp CCTAACCTTCACTTTCCCTGTCCCCATTCTAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCA +
Preference number: 1 (lower is better)
Translates to: PNLHFPCPHSRVRQE*RSEETHPPEEEGRA
Trigger: TGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCTAGAATGGGGACAGGGAAAGTGAAGGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp GGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAAGTGGTGGCTaGGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACA +
Preference number: 1 (lower is better)
Translates to: GSPWSACSLWSESGG*EAVTWKVCVGCACT
Trigger: TGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp GCATCACCATGTTGCAGGACTCCAGGATTCGACAGCAAAGCTCTGTaGTCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGG +
Preference number: 1 (lower is better)
Translates to: ASPCCRTPGFDSKAL*SRTPSTPQKSYSTG
Trigger: CCCAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTGGAGTCCTGCAACATGGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp GGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAAGTaGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGC +
Preference number: 1 (lower is better)
Translates to: GYRFSLERLFSLVRK*WLRSSHMEGVCWMC
Trigger: GCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp TCAGGAGCTTCACTAATCCTTTTGGGCAATTCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGCAGTGGCCTGGCTCAGGTCAGACAG +
Preference number: 1 (lower is better)
Translates to: SGASLILLGNSQHAQ*PVEAPSSGLAQVRQ
Trigger: CTGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp AGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATaGGGACATGGTCCTAGCCTTTCTTTCTCCACCAGGACCCTGACT +
Preference number: 1 (lower is better)
Translates to: SVGSLLCSTQQYLGQ*GHGPSLSFSTRTLT
Trigger: AGTCAGGGTCCTGGTGGAGAAAGAAAGGCTAGGACCATGTCCTCATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp TACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAAGTGGTaGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTG +
Preference number: 1 (lower is better)
Translates to: YRFSLERLFSLVRKW*LRSSHMEGVCWMCV
Trigger: CACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp ACGCTGACAAAGATGAGCCAATGCCTTTCACAAAAAGCCTGGCCTTaGGGAGAGGAGGAGAAATACCATAGGGGGATAGGAGGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: TLTKMSQCLSQKAWP*GEEEKYHRGIGGGQ
Trigger: TTGGCCTCCTCCTATCCCCCTATGGTATTTCTCCTCCTCTCCTCAAGGCCAGGCTTTTTGTGAAAGGCATTGGCTCATCTTTGTCAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp TATCCCTATGTGCATACTATGTCCTGCCCTGGCAAAAGGCACCTTTaGAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGA +
Preference number: 1 (lower is better)
Translates to: YPYVHTMSCPGKRHL*KPIRNEWGAAQMTR
Trigger: TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCTTTTGCCAGGGCAGGACATAGTATGCACATAGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp AAGGACTCTATAGAAAGGTATCAGCTTCCAGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCAGATAGGGCCCACTCCACAGGAGTT +
Preference number: 1 (lower is better)
Translates to: KDSIERYQLPGMEYS*KPVNAPDRAHSTGV
Trigger: AACTCCTGTGGAGTGGGCCCTATCTGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGATACCTTTCTATAGAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp ATTCTGATGCACCAACACGTAAGTTACAGAGGGCAGAGACTACCTTaGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACA +
Preference number: 1 (lower is better)
Translates to: ILMHQHVSYRGQRLP*LLMLPCAFQGACLT
Trigger: TGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCCTCTGTAACTTACGTGTTGGTGCATCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 90 bp TCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTaGGCCCATCAGGTAGGTTCCAATTCAGATTCTGATGCACCAACA +
Preference number: 1 (lower is better)
Translates to: SVIKDAFHSPEKLFH*AHQVGSNSDSDAPT
Trigger: TGTTGGTGCATCAGAATCTGAATTGGAACCTACCTGATGGGCCCAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp GACACCCAAGAGGCTCCAGTTACCTTGTTAAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGCTTCTGGAAACTAGGCTTCCTTTCT +
Preference number: 1 (lower is better)
Translates to: DTQEAPVTLLRSRGQ*SSSVSGFWKLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGAGCTACTTCACTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTCTTGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp CACTTACTAGGCTTTTTGCTTCATGCAAACTCTGTGGCTGGACTTTaGGGGATCCAGAATTTAGGATATAGGGCGGGTCCTTCACGAGGG +
Preference number: 1 (lower is better)
Translates to: HLLGFLLHANSVAGL*GIQNLGYRAGPSRG
Trigger: CCCTCGTGAAGGACCCGCCCTATATCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCCTAGTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp ATCAGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTaGCTGAAACCTAGGCACATAACAATATCCCTATGTGCATACTAT +
Preference number: 1 (lower is better)
Translates to: IRVEEGSSHFPLQKE*LKPRHITISLCAYY
Trigger: ATAGTATGCACATAGGGATATTGTTATGTGCCTAGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp ATCCCTGGCCCCTTTCCTTTCTCACTTACTAGGCTTTTTGCTTCATaGAAACTCTGTGGCTGGACTTTGAGGGATCCAGAATTTAGGATA +
Preference number: 1 (lower is better)
Translates to: IPGPFPFSLTRLFAS*KLCGWTLRDPEFRI
Trigger: TATCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCCTAGTAAGTGAGAAAGGAAAGGGGCCAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp CATCTTCACAAAAATAAATGCCTTTCAATTACATCCCTTGGCCTGTaGACTTCAGTGTTCATTATGGCCTCGCCAGGGTCAGGAGCTTCA +
Preference number: 1 (lower is better)
Translates to: HLHKNKCLSITSLGL*TSVFIMASPGSGAS
Trigger: TGAAGCTCCTGACCCTGGCGAGGCCATAATGAACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAAGGCATTTATTTTTGTGAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 90 bp AATTTGTCTGTACAAGAACCTGAATTTCTTGACAGACCTTCCCACTaGGCTCTCATAAAAGGACTCTATAGAAAGGTATCAGCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: NLSVQEPEFLDRPSH*ALIKGLYRKVSASR
Trigger: CCTGGAAGCTGATACCTTTCTATAGAGTCCTTTTATGAGAGCTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTTGTACAGACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 90 bp TTATTATTATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTaGCCAGTATGGCCTGTGACTTCTGCGCAGCAATTATTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: LLLLLLLIRAGLYQN*PVWPVTSAQQLFLQ
Trigger: CTGGAGAAATAATTGCTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAATAATAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVSAPQR*PSQALA
Trigger: GGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPISAPQR*PSQALA
Trigger: GGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGA...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: PEEGERHPGHECRQQRDWAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEISAPQR*PSQALA
Trigger: GGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGA...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCAC +
Preference number: 2 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRGLCNA*GALPHH
Trigger: GTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCC...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp GCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTaGCCAGCAATGGGCAGTCCCATCCCTACCCCCAACCCTATGGGT +
Preference number: 2 (lower is better)
Translates to: ASSPALTMLATVPSS*PAMGSPIPTPNPMG
Trigger: ACCCATAGGGTTGGGGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp GCAGGGGCAGCTGTGCTTACTCCCCGACCTCTGGCTCCAGGCACCTaGGACTGCAGGCTTCACCTGTTTGGTGAGAAGAACAAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: AGAAVLTPRPLAPGT*DCRLHLFGEKNKLS
Trigger: GGACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAAGCACAGCTGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 2 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 2 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp GTGGGGCAGACTGGGGAGAGGAGGCTTGTGTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATGAG +
Preference number: 2 (lower is better)
Translates to: VGQTGERRLVWLPLV*VHCCAAHSSIWVNE
Trigger: CTCATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTCCTCTCCCCAGTCTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 2 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTCCAGGGTGCTTGTTTaGCACCCAAGAGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQSRVLV*HPRGSS
Trigger: ACTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGAGCCCTGTGGCTCCTaGCAGGTTAACGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFEPCGS*QVNERA
Trigger: TGCCCTCTCGTTAACCTGTCAGGAGCCACAGGGCTC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 2 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCAC +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQGLCNA*GALPHH
Trigger: GTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 2 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGCCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PEEGERHPGHECRQQRDWPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAGGCTGGACATGCAGCTaGGGAGGCGGGAAACAGCCA +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRGWTCS*GGGKQP
Trigger: TGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCC...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGATCCCTCTGCATGCTaGCAGACAGCTGTCCACAGT +
Preference number: 2 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQDPSAC*QTAVHS
Trigger: ACTGTGGACAGCTGTCTGTCAGCATGCAGAGGGATC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGATCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQRSRGQ*SSSVSG
Trigger: GCCTGACACAGAGCTACTTCACTGTCCTCTACTCCT...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 2 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACCCCACCTGCCATGGTaGGAGGAAGAAGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKPHLPW*EEEGWS
Trigger: GGACCAGCCTTCTTCCTCCCACCATGGCAGGTGGGG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 2 (lower is better)
Translates to: RRAQGPSILNKASGWGQQKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGAGAGGAGGCTTGTGTaGCTCCCTCTAGTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQERRLV*LPLVLV
Trigger: AACCAACACTAGAGGGAGCCACACAAGCCTCCTCTC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHCLPLG*TCSWGG
Trigger: GCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGGGCGAGGAACATTTTaGGAACTGCACCAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITGRGTF*ELHQRP
Trigger: GGGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTTACTCCCCGACCTCTaGCTCCAGGCACCTTGGACT +
Preference number: 2 (lower is better)
Translates to: ACDFCAAIISPGTGPEATLLPDL*LQAPWT
Trigger: AGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTCAGAAAGTGGTGGCTaGGAAGCAGTCACATGGAAG +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQSESGG*EAVTWK
Trigger: CTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGACAGCTGTCCACAGTaGGTAGCCAAGGTGACTGGC +
Preference number: 2 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLDSCPQ*VAKVTG
Trigger: GCCAGTCACCTTGGCTACCCACTGTGGACAGCTGTC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAATCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGC +
Preference number: 2 (lower is better)
Translates to: RRAQGPSILNKASGWGQQSQHAQ*PVEAPS
Trigger: GCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGA...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCGATCCCTCTGCATGCTaGCAGACAGCTGTCCACAGT +
Preference number: 2 (lower is better)
Translates to: VCVGCACTWRRRNGLCNADPSAC*QTAVHS
Trigger: ACTGTGGACAGCTGTCTGTCAGCATGCAGAGGGATC...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGAGGAGTTTTCCCTGCTaGAATGAAGGAGGATGCACA +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQRSFPC*NEGGCT
Trigger: TGTGCATCCTCCTTCATTTCAGCAGGGAAAACTCCT...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFRSRGQ*SSSVSG
Trigger: GCCTGACACAGAGCTACTTCACTGTCCTCTACTCCT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACGACGTGCTCCATTTTaGAAGCAGATAAAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RRAQGPSILNKASGWGQQRRAPF*KQIKLP
Trigger: GGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 2 (lower is better)
Translates to: RRAQGPSILNKASGWGQQRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATGTGTTGGATGTGCGTaGACATGGAGGAGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRCVGCA*TWRRRN
Trigger: ATTTCTCCTCCTCCATGTGCACGCACATCCAACACA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGAGGCATCACCATGTTaGAGGACTCCAGGATTCGAC +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITEASPC*RTPGFD
Trigger: GTCGAATCCTGGAGTCCTGCAACATGGTGATGCCTC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCCGAGATCTAACCTTTaGAGCTTCAGGACTGGGTCC +
Preference number: 2 (lower is better)
Translates to: ACDFCAAIISPGTGPEATPRSNL*SFRTGS
Trigger: GGACCCAGTCCTGAAGCTGCAAAGGTTAGATCTCGG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 2 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 2 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAGTTAAAGCCAGGAAGTaGGGCAGACTGGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRVKARK*GRLGRG
Trigger: TCCTCTCCCCAGTCTGCCCCACTTCCTGGCTTTAAC...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTTTTGTGTTGCTGTTTaGGATAAAGGGGTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSFCVAV*DKGVPG
Trigger: ACCAGGGACCCCTTTATCCCAAACAGCAACACAAAA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTCCCATCAGAAATGAGTaGGGAGCAGCACAGATGACC +
Preference number: 2 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPPIRNE*GAAQMT
Trigger: GGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGG...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp CTGATGCACCAACACGTAAGTTACAGAGGGCAGAGACTACCTTGGTaGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCC +
Preference number: 2 (lower is better)
Translates to: LMHQHVSYRGQRLPW*LMLPCAFQGACLTP
Trigger: GGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCCTCTGTAACTTACGTGTTGGTGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGACAGACCTTCCCACTaGGCTCTCATAAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITDRPSH*ALIKGL
Trigger: GAGTCCTTTTATGAGAGCTCAGTGGGAAGGTCTGTC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGCTTCACCTGTTTGGTaGGAAGAACAAGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITASPVW*EEQAVP
Trigger: AGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGTGCATACTATGTCCTaGCCTGGCAAAAGGCACCTT +
Preference number: 2 (lower is better)
Translates to: ACDFCAAIISPGTGPEATVHTMS*PGKRHL
Trigger: AAGGTGCCTTTTGCCAGGGCAGGACATAGTATGCAC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCA +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITGMEYS*KPVNAP
Trigger: TGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTCTGTGTCAGGCTTCTaGAAACTAGGCTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQSVSGF*KLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAGAACAAGCTGTCCCTaGGCCAGAGGAATGTTCCTA +
Preference number: 2 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFRTSCP*ARGMFL
Trigger: TAGGAACATTCCTCTGGCCCAGGGACAGCTTGTTCT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp GTGTTCATTATGGCCTCGCCAGGGTCAGGAGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCACAGTGGCCTGTAGAGGCACCAAGC +
Preference number: 2 (lower is better)
Translates to: VFIMASPGSGASLIL*GNSQHAQWPVEAPS
Trigger: GCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGCTCCTGACCCTGGCGAGGCCATAATGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGACAGTATCTGGGTCAATaGGGACATGGTCCTAGCCTT +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRQYLGQ*GHGPSL
Trigger: AAGGCTAGGACCATGTCCTCATTGACCCAGATACTG...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAAGGAGTTTTCCCTGCTaGAATGAAGGAGGATGCACA +
Preference number: 2 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITRSFPC*NEGGCT
Trigger: TGTGCATCCTCCTTCATTTCAGCAGGGAAAACTCCT...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 2 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTGGATGTGCGTGCACATaGAGGAGGAGAAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFGCACT*RRRNGL
Trigger: CAGGCCATTTCTCCTCCTCCATGTGCACGCACATCC...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGGTACAGGTTCTCCTTaGAGCGCCTGTTCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKGTGSP*SACSLW
Trigger: CCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGAGCTACTTGCTTCCTaGGTATTATCTGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: ACDFCAAIISPGTGPEATELLAS*VLSGPS
Trigger: GGAAGGACCAGATAATACCCAGGAAGCAAGTAGCTC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp TTGCAGCTTCAGGACTGGGTCCTGGGTCTCCTGACCTTTAGTCCCTaGCTCTTTCCACTAAAACAAGCCACCAAAGGTGATCAGGATCAC +
Preference number: 2 (lower is better)
Translates to: LQLQDWVLGLLTFSP*LFPLKQATKGDQDH
Trigger: GTGATCCTGATCACCTTTGGTGGCTTGTTTTAGTGGAAAGAGCAAGGGACTAAAGGTCAGGAGACCCAGGACCCAGTCCTGAAGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAATGAATTATGAATGGTaGCCACGGAGAAAGGGCGAG +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQMNYEW*PRRKGE
Trigger: CTCGCCCTTTCTCCGTGGTCACCATTCATAATTCAT...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLLVLVH*CAAHSS
Trigger: ACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAG...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTCTCAACAATTCTCCCTaGACCATCAGCTCAATTACC +
Preference number: 2 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFLNNSP*TISSIT
Trigger: GGTAATTGAGCTGATGGTGCAGGGAGAATTGTTGAG...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGGCTGATGCTTCCCTGTaGCTTCCAGGGTGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVADASL*LPGCLF
Trigger: AAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGC...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGATCAGCTTCCAGGGATaGAATACAGCTGGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLISFQG*NTAGSL
Trigger: CAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGAT...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp AAATCACAAGATCCTCCTCAAGATCCAGAATGTATTCCAAAGCTGTaGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: KSQDPPQDPECIPKL*YPFPSTGSPCKLLL
Trigger: AAGGAGCAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACATTCTGGATCTTGAGGAGGATCTTGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCCGAGAAGGGAGCAATaGGCAATGCCCCTGAATATC +
Preference number: 2 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNPRREQ*AMPLNI
Trigger: GATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGATTTTCCCTGCTGAAATaGAGGAGGATGCACAGACTT +
Preference number: 2 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRFSLLK*RRMHRL
Trigger: AAGTCTGTGCATCCTCCTTCATTTCAGCAGGGAAAA...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAATGTGTTGGATGTGCGTaGACATGGAGGAGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKCVGCA*TWRRRN
Trigger: ATTTCTCCTCCTCCATGTGCACGCACATCCAACACA...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACTCAACAATTCTCCCTaGACCATCAGCTCAATTACC +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQLNNSP*TISSIT
Trigger: GGTAATTGAGCTGATGGTGCAGGGAGAATTGTTGAG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGAACAATATCCCTATGTaGATACTATGTCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLNNIPM*ILCPAL
Trigger: CAGGGCAGGACATAGTATGCACATAGGGATATTGTT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 2 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCACCAAGCAGTGGCCTaGCTCAGGTCAGACAGCACT +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNHQAVA*LRSDST
Trigger: AGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp CAGGTTAACGAGAGGGCACGAAACTCCAGTGCGACGTGCTCCATTTaGAAAGCAGATAAAGCTCCCCTCATCAGAGTGAAGAGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: QVNERARNSSATCSI*KADKAPLIRVKRKV
Trigger: TACTTTCCTCTTCACTCTGATGAGGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCCCTCTCGTTAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 2 (lower is better)
Translates to: TLVADASLCLPGCLFDTQLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACGTGTTAGGAACCCCATaGAGAAGAATAGGTACTACC +
Preference number: 2 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHVLGTP*RRIGTT
Trigger: GGTAGTACCTATTCTTCTCCATGGGGTTCCTAACAC...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTCTGTGTCAGGCTTCTaGAAACTAGGCTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLSVSGF*KLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCAGAACTGCCCAGTATaGCCTGTGACTTCTGCGCAG +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNQNCPV*PVTSAQ
Trigger: CTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGGAGAGCGTACCGCTTaGAGACAGGGTGCTCAGATG +
Preference number: 2 (lower is better)
Translates to: IVIINKGRFVPELPSMACGERTA*RQGAQM
Trigger: CATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAAAATTAGAGCTACTTaGTTCCTGGGTATTATCTGG +
Preference number: 2 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFKIRAT*FLGIIW
Trigger: CCAGATAATACCCAGGAAGCAAGTAGCTCTAATTTT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCTGTGCCTTCCAGGGTaGTTGTTTGACACCCAAGAG +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLCLPG*LFDTQE
Trigger: CTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGATAGTTTTAGGTTTATaGAACCCTCCCCCTTCATTT +
Preference number: 2 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLIVLGL*NPPPSF
Trigger: AAATGAAGGGGGAGGGTTGCATAAACCTAAAACTAT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGACTACCTTGGTTGCTaGTGCTTCCCTGTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: IVIINKGRFVPELPSMACDYLGC*CFPVPS
Trigger: GGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCTGTTCGCTCCCTTCTaGAGTACCCTGAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: IVIINKGRFVPELPSMACLFAPF*STLRKE
Trigger: CTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGGCACGAAACTCCAGTaGGACGTGCTCCATTTTGAA +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNGTKLQ*DVLHFE
Trigger: TTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCTGTGCCTTCCAGGGTaGTTGTTTGACACCCAAGAG +
Preference number: 2 (lower is better)
Translates to: IVIINKGRFVPELPSMACLCLPG*LFDTQE
Trigger: CTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGGACTTGTATTTGGGTaGGGGAATCCCTACAGCTTT +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNGLVFG*GNPYSF
Trigger: AAAGCTGTAGGGATTCCCCCACCCAAATACAAGTCC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATACAGGTCTGGCAACCTaGATGTTTAAAAATGGATTC +
Preference number: 2 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNTGLAT*MFKNGF
Trigger: GAATCCATTTTTAAACATTCAGGTTGCCAGACCTGT...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTTCAGAAAGTGGTGGCTaGGAAGCAGTCACATGGAAG +
Preference number: 2 (lower is better)
Translates to: IVIINKGRFVPELPSMACSESGG*EAVTWK
Trigger: CTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGA...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCGCTTGAAGACAGGGTaGTCAGATGTTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNRLKTG*SDVFIP
Trigger: TGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTATTGGGATTTTGGCTaGTCTTTCCCCAGAGTTAGG +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNYWDFG*SFPRVR
Trigger: CCTAACTCTGGGGAAAGAGCAGCCAAAATCCCAATA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTTCTTCAAACCCAAATaGCTGAACATTGCTATGAAC +
Preference number: 2 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFFFKPK*LNIAMN
Trigger: GTTCATAGCAATGTTCAGCCATTTGGGTTTGAAGAA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCTTTGGATTCCCCCATaGTTTCTGGTTTTTGTGAAA +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLWIPP*FLVFVK
Trigger: TTTCACAAAAACCAGAAACCATGGGGGAATCCAAAG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCTTCTCAAAATTTTCTaGGTCACTGTTGCTAACAAG +
Preference number: 2 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLLKIF*VTVANK
Trigger: CTTGTTAGCAACAGTGACCCAGAAAATTTTGAGAAG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 90 bp CAAATGGAGTTATTATTATTATTGTTATTATTAATAAGGGCAGGTTaGTACCAGAACTGCCCAGTATGGCCTGTGACTTCTGCGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QMELLLLLLLLIRAG*YQNCPVWPVTSAQQ
Trigger: TTGCTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAATAATAATAATAACTCCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp TGGGAACTGCACCAGAGGCCCTGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGCGGGAAACAGCCAACT +
Preference number: 3 (lower is better)
Translates to: WELHQRPCLPLG*TCSWGGGKQPT
Trigger: AGTTGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACAGGGCCTCTGGTGCAGTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp CGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCCAGGGCACGAATGCAG +
Preference number: 3 (lower is better)
Translates to: RTVPCSLPSAVP*GRREAPRARMQ
Trigger: CTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAGGGTACTGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp CAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTaGCAGCAATGGGCAGTCCCATCCCTACCCCCAACC +
Preference number: 3 (lower is better)
Translates to: QPSPCLLLFPVP*QQWAVPSLPPT
Trigger: GGTTGGGGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCTCCACCGGCTCCCCTaGCAAGCTGCTCCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: ACDFCAAIISPGTGPEATLHRLP*QAAPSQ
Trigger: CTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGAG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACCTTCCTACAAGGGGTaGGCCAGGAATGTCGCCCCC +
Preference number: 3 (lower is better)
Translates to: TLVADASLCLPGCLFDTQPSYKG*ARNVAP
Trigger: GGGGGCGACATTCCTGGCCAACCCCTTGTAGGAAGG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCTGAGGCCAGGGTGCTaGGGGAGGAACTGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: ACDFCAAIISPGTGPEATLRPGC*GRNWSS
Trigger: TGAACTCCAGTTCCTCCCCAAGCACCCTGGCCTCAG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGAGGGCGAGGAACATTTaGGGAACTGCACCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLRARNI*GTAPEA
Trigger: GGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCCT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACCTTCCTACAAGGGGTaGGCCAGGAATGTCGCCCCC +
Preference number: 3 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKPSYKG*ARNVAP
Trigger: GGGGGCGACATTCCTGGCCAACCCCTTGTAGGAAGG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp CCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGCAATaGGCAGTCCCATCCCTACCCCCAACCCTATGGGTA +
Preference number: 3 (lower is better)
Translates to: PCLLLFPVPCQQ*AVPSLPPTLWV
Trigger: TACCCATAGGGTTGGGGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAACTGGGAACAGTAGCAAGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp TCAACATGCACAGTGGCCTGTAGAGGCACCAAGCAGTaGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGA +
Preference number: 3 (lower is better)
Translates to: STCTVACRGTKQ*PGSGQTALTWG
Trigger: TCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCTACAGGCCACTGTGCATGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp GACATGGTCCTAGCCTTTCTTTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAGCATGGAGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: DMVLAFLSPPGP*LIWLAQHGGEG
Trigger: TCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGAAAGAAAGGCTAGGACCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAWLPLV*VHCCAA
Trigger: TGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCA...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATCGGTCATCCAAAGCTaGACACTCAAGGCACTGAAA +
Preference number: 3 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRSVIQS*TLKALK
Trigger: TTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGAGGCTCCAGTTACCTaGTTAAGGAGTAGAGGACAG +
Preference number: 3 (lower is better)
Translates to: RRAQGPSILNKASGWGQQEAPVT*LRSRGQ
Trigger: CTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp AGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTaGATATCAGGGAACAGCTGTGAAAGCCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: RLVREGSNEQCP*ISGNSCESLLL
Trigger: GAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp CACTTTCCCTGTCCCCATTCTAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACATCCTCCCGAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: HFPCPHSRVRQE*RSEETHPPEEE
Trigger: CTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCTAGAATGGGGACAGGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp AGGAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGTATCTGGGTCAATGAG +
Preference number: 3 (lower is better)
Translates to: RRLVWLPLVLVH*CAAHSSIWVNE
Trigger: CTCATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTaGATGTGCGTGCACATGGAGGAGGAGAAATGGCCT +
Preference number: 3 (lower is better)
Translates to: WWLRSSHMEGVC*MCVHMEEEKWP
Trigger: AGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp GGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGGCTaGGTAGAAAATGTGACCACAGGGAGCCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GARNGGCNAKNG*VENVTTGSPGP
Trigger: AGGCCCAGGGCTCCCTGTGGTCACATTTTCTACCCAGCCATTCTTGGCATTGCAACCTCCATTTCTAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACATGGAAGGTGTGTGTaGGATGTGCGTGCACATGGA +
Preference number: 3 (lower is better)
Translates to: TLVADASLCLPGCLFDTQHGRCV*DVRAHG
Trigger: TCCATGTGCACGCACATCCAACACACACCTTCCATG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTTCCAGGGTGCTTGTTaGACACCCAAGAGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHFQGAC*TPKRLQ
Trigger: CTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCCTTCCAGGGTGCTaGTTTGACACCCAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHCLPGC*FDTQEA
Trigger: AGCCTCTTGGGTGTCAAACAAGCACCCTGGAAGGCA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACAGAGACTACCTTGGTaGCTGATGCTTCCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKQRLPW*LMLPCA
Trigger: GGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp CCCTGGCAAAAGGCACCTTTGCAAACCCATCAGAAATaGGTGGGGAGCAGCACAGATGACCCGATAGCCAAA +
Preference number: 3 (lower is better)
Translates to: PWQKAPLQTHQK*VGSSTDDPIAK
Trigger: TTTGGCTATCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCTTTTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp GAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTaGACATGGAGGAGGAGAAATGGCCTGTGTAATGCC +
Preference number: 3 (lower is better)
Translates to: EAVTWKVCVGCA*TWRRRNGLCNA
Trigger: GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp TCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAAGTGGTaGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGG +
Preference number: 3 (lower is better)
Translates to: SLERLFSLVRKW*LRSSHMEGVCW
Trigger: CCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp TCACTAATCCTTTTGGGCAATTCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGCAGTGGCCTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: SLILLGNSQHAQ*PVEAPSSGLAQ
Trigger: CTGAGCCAGGCCACTGCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGAATTGCCCAAAAGGATTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCACTGGGACTTGTATTaGGGTGGGGGAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVHWDLY*GGGIPT
Trigger: TGTAGGGATTCCCCCACCCAAATACAAGTCCCAGTG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCCTTTCCACTGGGACTaGTATTTGGGTGGGGGAATC +
Preference number: 3 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFPFHWD*YLGGGI
Trigger: GATTCCCCCACCCAAATACAAGTCCCAGTGGAAAGG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: ACDFCAAIISPGTGPEATKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGAGGGTGTATTTTGTGTaGCTGTTTGGGATAAAGGGG +
Preference number: 3 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLRVYFV*LFGIKG
Trigger: CCCCTTTATCCCAAACAGCAACACAAAATACACCCT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp TGTTGCAGGACTCCAGGATTCGACAGCAAAGCTCTGTaGTCAAGGACGCCTTCCACTCCCCAGAAAAGCTAT +
Preference number: 3 (lower is better)
Translates to: CCRTPGFDSKAL*SRTPSTPQKSY
Trigger: ATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTGGAGTCCTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp AATTTAGGATATAGGGCGGGTCCTTCACGAGGGAAGTaGCCGTGGCTCAGCCAAAATCACAAGATCCTCCTC +
Preference number: 3 (lower is better)
Translates to: NLGYRAGPSRGK*PWLSQNHKILL
Trigger: GAGGAGGATCTTGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATCCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp AGTAGCCCTGCTGGAATAAGGGGAGAGCGTACCGCTTaGAGACAGGGTGCTCAGATGTTTTCATTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: SSPAGIRGERTA*RQGAQMFSFQA
Trigger: TGCTTGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCCCCTTATTCCAGCAGGGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp CAGGTTAACGAGAGGGCACGAAACTCCAGTGCGACGTaGTCCATTTTGAAAGCAGATAAAGCTCCCCTCATC +
Preference number: 3 (lower is better)
Translates to: QVNERARNSSAT*SILKADKAPLI
Trigger: GATGAGGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCCCTCTCGTTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp ATAGAAAGGTATCAGCTTCCAGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCAGATAGGGCCCACTCC +
Preference number: 3 (lower is better)
Translates to: IERYQLPGMEYS*KPVNAPDRAHS
Trigger: GGAGTGGGCCCTATCTGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGATACCTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp GTAGCCAAGGTGACTGGCATTTTGATCCCAGCTGAATaGAGACTGGATTTGAATGCAGTGCCAGGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: VAKVTGILIPAE*RLDLNAVPGLF
Trigger: GAACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAAAATGCCAGTCACCTTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp GAGGCTCCAGTTACCTTGTTAAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGCTTCTGGAAACTAGGC +
Preference number: 3 (lower is better)
Translates to: EAPVTLLRSRGQ*SSSVSGFWKLG
Trigger: GCCTAGTTTCCAGAAGCCTGACACAGAGCTACTTCACTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp GCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATaGCCCGATAGCCAAAGGATAGCCCCACATCAATTT +
Preference number: 3 (lower is better)
Translates to: ANPSEMSGEQHR*PDSQRIAPHQF
Trigger: AAATTGATGTGGGGCTATCCTTTGGCTATCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp TTCATTCCAAGCAAGACAGTGATAACAGCACAGCACTaGTCCCATCCCTGGCCCCTTTCCTTTCTCACTTAC +
Preference number: 3 (lower is better)
Translates to: FIPSKTVITAQH*SHPWPLSFLTY
Trigger: GTAAGTGAGAAAGGAAAGGGGCCAGGGATGGGAGCAGTGCTGTGCTGTTATCACTGTCTTGCTTGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp AAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTaGGCCCATCAGGTAGGTTCCAATTCAGATTCTGAT +
Preference number: 3 (lower is better)
Translates to: KDAFHSPEKLFH*AHQVGSNSDSD
Trigger: ATCAGAATCTGAATTGGAACCTACCTGATGGGCCCAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTATGGATTCAAAGTGCTaGGAGACTGAAAGAGTAATG +
Preference number: 3 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPMDSKC*ETERVM
Trigger: CATTACTCTTTCAGTCTCCAAGCACTTTGAATCCAT...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTTCCAGGGTGCTTGTTaGACACCCAAGAGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: LGGENSTGARNGGCNAKNFQGAC*TPKRLQ
Trigger: CTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp GGCTTTTTGCTTCATGCAAACTCTGTGGCTGGACTTTaGGGGATCCAGAATTTAGGATATAGGGCGGGTCCT +
Preference number: 3 (lower is better)
Translates to: GFLLHANSVAGL*GIQNLGYRAGP
Trigger: AGGACCCGCCCTATATCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp GAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTaGCTGAAACCTAGGCACATAACAATATCCCTATGT +
Preference number: 3 (lower is better)
Translates to: EEGSSHFPLQKE*LKPRHITISLC
Trigger: ACATAGGGATATTGTTATGTGCCTAGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp GAATGGCTGGGTAGAAAATGTGACCACAGGGAGCCCTaGGCCTCTTCTGGTGAAATTGGACTTCTCAAAATT +
Preference number: 3 (lower is better)
Translates to: EWLGRKCDHREP*ASSGEIGLLKI
Trigger: AATTTTGAGAAGTCCAATTTCACCAGAAGAGGCCCAGGGCTCCCTGTGGTCACATTTTCTACCCAGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGAGCGCCTGTTCTCTTaGGTCAGAAAGTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACERLFS*VRKWWL
Trigger: CAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTAGGGCAGAGACTACCTaGGTTGCTGATGCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACRAETT*VADASL
Trigger: CAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCCT...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp TCCCTTGCTCTTTCCACTAAAACAAGCCACCAAAGGTaGTCAGGATCACCAACTACTGAGGCATCACCATGT +
Preference number: 3 (lower is better)
Translates to: SLALSTKTSHQR*SGSPTTEASPC
Trigger: ACATGGTGATGCCTCAGTAGTTGGTGATCCTGATCACCTTTGGTGGCTTGTTTTAGTGGAAAGAGCAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp TGGAATAAGGGGAGAGCGTACCGCTTGAAGACAGGGTaGTCAGATGTTTTCATTCCAAGCAAGACAGTGATA +
Preference number: 3 (lower is better)
Translates to: WNKGRAYRLKTG*SDVFIPSKTVI
Trigger: TATCACTGTCTTGCTTGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCCCCTTATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCCTTTCCACTGGGACTaGTATTTGGGTGGGGGAATC +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACPFHWD*YLGGGI
Trigger: GATTCCCCCACCCAAATACAAGTCCCAGTGGAAAGG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTACTGTATTGGGATTTaGGCTGCTCTTTCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: LGGENSTGARNGGCNAKNYCIGI*AALSPE
Trigger: CTCTGGGGAAAGAGCAGCCAAAATCCCAATACAGTA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTTCAGACAGCACTAACTaGGGGAAGCCAGGATTTCTG +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACSDSTN*GKPGFL
Trigger: CAGAAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGA...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR TCA 72 bp CCTATCAGAGTCCACTGTGTGACAGGTCTGGCAACCTaGATGTTTAAAAATGGATTCAAAGTGCTTGGAGAC +
Preference number: 3 (lower is better)
Translates to: PIRVHCVTGLAT*MFKNGFKVLGD
Trigger: GTCTCCAAGCACTTTGAATCCATTTTTAAACATTCAGGTTGCCAGACCTGTCACACAGTGGACTCTGATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp AAAAATAAATGCCTTTCAATTACATCCCTTGGCCTGTaGACTTCAGTGTTCATTATGGCCTCGCCAGGGTCA +
Preference number: 3 (lower is better)
Translates to: KNKCLSITSLGL*TSVFIMASPGS
Trigger: TGACCCTGGCGAGGCCATAATGAACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAAGGCATTTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR GCA 72 bp TTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTaGCCAGTATGGCCTGTGACTTCTGCGCAGCAATTA +
Preference number: 3 (lower is better)
Translates to: LLLLIRAGLYQN*PVWPVTSAQQL
Trigger: TAATTGCTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTTTTCAATTACATCCCTaGGCCTGTGCACTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACFQLHP*ACALQC
Trigger: ACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAA...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCA +
Preference number: 3 (lower is better)
Translates to: IVIINKGRFVPELPSMACASLIL*GNSQHA
Trigger: TGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CCA 72 bp GGTCTTGGCTTTAATGTGGTTTTCTTCAAACCCAAATaGCTGAACATTGCTATGAACATAGGTCATGTATAT +
Preference number: 3 (lower is better)
Translates to: GLGFNVVFFKPK*LNIAMNIGHVY
Trigger: ATATACATGACCTATGTTCATAGCAATGTTCAGCCATTTGGGTTTGAAGAAAACCACATTAAAGCCAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGTGGGAGAGACGGGATaGGGGGCGGCCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRVGETG*GAAVEA
Trigger: CGCTTCGACGGCCGCCCCTCATCCCGTCTCTCCCAC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGCCACAGCGCCCTCCTaGTGCGTCCCGTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPATAPS*CVPSRN
Trigger: GTTCCGGGACGGGACGCAGCAGGAGGGCGCTGTGGC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGCTGGGGCCCGGAGTTaGCGAGCGAGCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGAGARS*RASQRS
Trigger: GCTCCTCTGGCTCGCTCGCCAACTCCGGGCCCCAGC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCACCGTGGCCAGGCTTTaGGGCCCTGGCCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPTVARL*GPGPCP
Trigger: TGGGCATGGGCCAGGGCCTCAAAGCCTGGCCACGGT...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR TCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGTGCCAGCGTCTGCCTaGGTCACCGACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPVPASA*VTDFSS
Trigger: GCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCAC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGCTCTTCCAGCTGGATaGTGGCTGTGCCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPALPAG*WLCLAR
Trigger: TCGGGCCAGGCACAGCCATCATCCAGCTGGAAGAGC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACGAGGAGGCTCAGCATaGTGTCCGCCCGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRGGSA*CPPAVR
Trigger: GCGCACGGCGGGCGGACAGCATGCTGAGCCTCCTCG...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCAGGCTTTGAGGCCCTaGCCCATGCCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRQALRP*PMPRAS
Trigger: GCTGGCCCTGGGCATGGGCCAGGGCCTCAAAGCCTG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCCCCACCTGCCATGGTaGGAGGAAGAAGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPPHLPW*EEEGWS
Trigger: GGACCAGCCTTCTTCCTCCCACCATGGCAGGTGGGG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGTGGGAGAGACGGGATaGGGGGCGGCCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGVGETG*GAAVEA
Trigger: CGCTTCGACGGCCGCCCCTCATCCCGTCTCTCCCAC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPLHDPG*CGDAGG
Trigger: ACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGGTGGGGTACCCAGCTaGCCCAGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPGGVPS*PREGMG
Trigger: TCCCATCCCTTCCCTGGGGCAGCTGGGTACCCCACC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGCCACAGCGCCCTCCTaGTGCGTCCCGTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQATAPS*CVPSRN
Trigger: GTTCCGGGACGGGACGCAGCAGGAGGGCGCTGTGGC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGCTGGGGCCCGGAGTTaGCGAGCGAGCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQAGARS*RASQRS
Trigger: GCTCCTCTGGCTCGCTCGCCAACTCCGGGCCCCAGC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCCTCCCGGGTGTCGATaGTGTCGCAGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRPPGCR*CRSAGP
Trigger: AGGACCTGCGCTGCGACACCATCGACACCCGGGAGG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAGCCCAGTCGGTAGGTaGGGTACCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGSPVGR*GTQLPQ
Trigger: CTGGGGCAGCTGGGTACCCCACCTACCGACTGGGCT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGAGCCCAGTCGGTAGGTaGGGTACCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWSPVGR*GTQLPQ
Trigger: CTGGGGCAGCTGGGTACCCCACCTACCGACTGGGCT...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGCCCCAGCCAGGCTCTaGCCCCTACACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWAPARL*PLHVSL
Trigger: CAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCTGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCCLPLG*TCSWGG
Trigger: GCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACA...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACTCCCTCCCTCCGCCTaGCGTCTACTCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGLPPSA*RLLSLR
Trigger: TCGGAGGGAGAGTAGACGTCAGGCGGAGGGAGGGAG...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGTGCCAGCGTCTGCCTaGGTCACCGACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRVPASA*VTDFSS
Trigger: GCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCAC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGTAGGTGCCAGCGTCTaGCTGAGTCACCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPVGASV*LSHRLQ
Trigger: CTGAAGTCGGTGACTCAGGCAGACGCTGGCACCTAC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCCTCCTTCCAGGCCCATaGTATGCGGTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPLLPGP*YAVWGW
Trigger: CCACCCCCAGACCGCATAGCATGGGCCTGGAAGGAG...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCTCCTTCCAGGCCCATaGTATGCGGTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRLLPGP*YAVWGW
Trigger: CCACCCCCAGACCGCATAGCATGGGCCTGGAAGGAG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTCTCCTTCCAGGCCCATaGTATGCGGTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSLLPGP*YAVWGW
Trigger: CCACCCCCAGACCGCATAGCATGGGCCTGGAAGGAG...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCTTTGCGACTGCCTTTaGGGCGCCGGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPLCDCL*GAGRGR
Trigger: TCTTCCTCTACCGGCGCCGCAAAGGCAGTCGCAAAG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCGGTGGGGTACCCAGCTaGCCCAGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIGGVPS*PREGMG
Trigger: TCCCATCCCTTCCCTGGGGCAGCTGGGTACCCCACC...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWSAPQR*PSQALA
Trigger: GGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGA...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCACAGCGCCCTCCTGCTaGGTCCCGTCCCGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEITAPSC*VPSRNQ
Trigger: CTGGTTCCGGGACGGGACGCAGCAGGAGGGCGCTGT...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRGLCNA*GALPHH
Trigger: GTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWGLCNA*GALPHH
Trigger: GTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCAGGCAGGGGCAGCTGTaGTTACTCCCCGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGRQGQL*LLPDLW
Trigger: CCAGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCT...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGACCAGCCACCACCGTCTaGTCAGCTGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRPATTV*SAGSWL
Trigger: CAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGG...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCCACAACCCGGTACCGTaGCCAGGCTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPHNPVP*PGFEAL
Trigger: CAGGGCCTCAAAGCCTGGCCACGGTACCGGGTTGTG...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGCTGGGCATAGCCGCTaGAGTGGGAGAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWAGHSR*SGRDGM
Trigger: CATCCCGTCTCTCCCACTCCAGCGGCTATGCCCAGC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCTGGCTGGCCCAGCATaGAGGAGAAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRLAGPA*RRRKAG
Trigger: GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCCGGCATGTGAGGTTGTaGGGGGTGCCTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPRHVRL*GVPACS
Trigger: ACTGCAGGCAGGCACCCCCCACAACCTCACATGCCG...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTCTCCCTCCCTCCGCCTaGCGTCTACTCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPLPPSA*RLLSLR
Trigger: TCGGAGGGAGAGTAGACGTCAGGCGGAGGGAGGGAG...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCAGCTGGCTCCTGGCTaGAGCGGGTCTGGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVQLAPG*SGSGSL
Trigger: TAAGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCGCTCTTCCAGCTGGATaGTGGCTGTGCCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIALPAG*WLCLAR
Trigger: TCGGGCCAGGCACAGCCATCATCCAGCTGGAAGAGC...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTGGGAGAGACGGGATaGGGGGCGGCCGTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLVGETG*GAAVEA
Trigger: CGCTTCGACGGCCGCCCCTCATCCCGTCTCTCCCAC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCAGCTGGCTCCTGGCTaGAGCGGGTCTGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIQLAPG*SGSGSL
Trigger: AAGGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR GCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCGAGGAGGCTCAGCATaGTGTCCGCCCGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYRGGSA*CPPAVR
Trigger: GCGCACGGCGGGCGGACAGCATGCTGAGCCTCCTCG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGLHDPG*CGDAGG
Trigger: ACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATSAPQR*PSQALA
Trigger: GGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCCTTCAGCAATTCCGTaGTGGCCACAGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGPSAIP*WPQRPP
Trigger: AGGAGGGCGCTGTGGCCAGCACGGAATTGCTGAAGG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCCAGCCACCACCGTCTaGTCAGCTGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWPATTV*SAGSWL
Trigger: CAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTGCAGGGCGGCCTCCGTaGCCTGGCACTCGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPAGRPP*PGTRKR
Trigger: CCTCTTACGAGTGCCAGGCCACGGAGGCCGCCCTGC...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCCCATGCTATGCGGTCTaGGGGTGGTGTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCPCYAV*GWCAPN
Trigger: ATTGGGAGCACACCACCCCCAGACCGCATAGCATGG...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGATGATGGCTGTGCCTaGCCCGAAGCTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPDDGCA*PEAVPG
Trigger: GCCTGGAACAGCTTCGGGCCAGGCACAGCCATCATC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCAGGGCCAGGGGGTGTaGGCTCAGGGCCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGQGQGV*AQGHSQ
Trigger: CTGACTATGGCCCTGAGCCCACACCCCCTGGCCCTG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCAGGGCCAGGGGGTGTaGGCTCAGGGCCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIQGQGV*AQGHSQ
Trigger: CTGACTATGGCCCTGAGCCCACACCCCCTGGCCCTG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGCCCCAGCCAGGCTCTaGCCCCTACACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQAPARL*PLHVSL
Trigger: CAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGCCCCAGCCAGGCTCTaGCCCCTACACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGAPARL*PLHVSL
Trigger: CAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCCCCACCTGCCATGGTaGGAGGAAGAAGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVPHLPW*EEEGWS
Trigger: GGACCAGCCTTCTTCCTCCCACCATGGCAGGTGGGG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTCAGCAATTCCGTGCTaGCCACAGCGCCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWSAIPC*PQRPPA
Trigger: AGCAGGAGGGCGCTGTGGCCAGCACGGAATTGCTGA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGCLPLG*TCSWGG
Trigger: GCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGCTCTTCCAGCTGGATaGTGGCTGTGCCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQALPAG*WLCLAR
Trigger: TCGGGCCAGGCACAGCCATCATCCAGCTGGAAGAGC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCTGGTGGCCCCAGCTATaGTGCCCACAGGTAACACCT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGWWPQL*CPQVTP
Trigger: AGGTGTTACCTGTGGGCATCATAGCTGGGGCCACCA...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAGAGCCCTGTGGCTCCTaGCAGGTTAACGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVREPCGS*QVNERA
Trigger: TGCCCTCTCGTTAACCTGTCAGGAGCCACAGGGCTC...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGCCCAGTATGGCCTGTaGCTTCTGCGCAGCAATTAT +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPAQYGL*LLRSNY
Trigger: ATAATTGCTGCGCAGAAGTCACAGGCCATACTGGGC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAATCTCCAGGTTGTACTaGCCAGCGTCTGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRISRLY*PASAEP
Trigger: GGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGAT...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAATCTCCAGGTTGTACTaGCCAGCGTCTGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGISRLY*PASAEP
Trigger: GGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGAT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR GCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGCCCGGCAGGTGTAGGTaGCAGCGTCTGCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQPGRCR*QRLPES
Trigger: TGACTCAGGCAGACGCTGGCACCTACACCTGCCGGG...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCACAGCATACTGCACTaGCTCACTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPHSILH*LTGDDG
Trigger: CCCATCATCTCCAGTGAGGCAGTGCAGTATGCTGTG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTCCAGGCCCATGCTATaGGGTCTGGGGGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQSRPML*GLGVVC
Trigger: GCACACCACCCCCAGACCGCATAGCATGGGCCTGGA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCACACGTGAGTCTGCATaGGCTGCTGGAATCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPTRESA*AAGIAG
Trigger: GCCAGCGATTCCAGCAGCGCATGCAGACTCACGTGT...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGGCCTGTGTAATGCCTaGGGTGCCCTTCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPGLCNA*GALPHH
Trigger: GTGGTGCGGAAGGGCACCGCAGGCATTACACAGGCC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTCACCGTCTGGTCAGCTaGCTCCTGGCTGAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPHRLVS*LLAEAG
Trigger: ACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTG...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCACAACCCGGTACCGTaGCCAGGCTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGHNPVP*PGFEAL
Trigger: CAGGGCCTCAAAGCCTGGCCACGGTACCGGGTTGTG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGCAGGGCGGCCTCCGTaGCCTGGCACTCGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGAGRPP*PGTRKR
Trigger: CCTCTTACGAGTGCCAGGCCACGGAGGCCGCCCTGC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCGATTCGAGGCACGATaGCCCGGCAGGTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGRFEAR*PGRCRC
Trigger: GCACCTACACCTGCCGGGCCATCGTGCCTCGAATCG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTCTCGCTCTTCCAGCTaGATGATGGCTGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWSRSSS*MMAVPG
Trigger: GCCAGGCACAGCCATCATCCAGCTGGAAGAGCGAGA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTTGCTGTGGAGACGCTaGCGGTGTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVLLWRR*RCHPPG
Trigger: ACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCCTCCCGGGTGTCGATaGTGTCGCAGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATPPGCR*CRSAGP
Trigger: AGGACCTGCGCTGCGACACCATCGACACCCGGGAGG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGCTGGGCATAGCCGCTaGAGTGGGAGAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQAGHSR*SGRDGM
Trigger: CATCCCGTCTCTCCCACTCCAGCGGCTATGCCCAGC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGCTGGGCATAGCCGCTaGAGTGGGAGAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWAGHSR*SGRDGM
Trigger: CATCCCGTCTCTCCCACTCCAGCGGCTATGCCCAGC...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGACAGCTGTCCACAGTaGGTAGCCAAGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGDSCPQ*VAKVTG
Trigger: GCCAGTCACCTTGGCTACCCACTGTGGACAGCTGTC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCTGGCTGGCCCAGCATaGAGGAGAAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQLAGPA*RRRKAG
Trigger: GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCGGCATGTGAGGTTGTaGGGGGTGCCTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWRHVRL*GVPACS
Trigger: ACTGCAGGCAGGCACCCCCCACAACCTCACATGCCG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTTAGGAAGGCGAGGCTaGGGCAGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGLGRRG*GRGTGS
Trigger: AGAACCTGTACCCCTGCCCCAGCCTCGCCTTCCTAA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTGTCTCCCACTGGGCTaGACATGCAGCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQCLPLG*TCSWGG
Trigger: GCCTCCCCAGCTGCATGTCCAGCCCAGTGGGAGACA...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGGGCGAGGAACATTTTaGGAACTGCACCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRGRGTF*ELHQRP
Trigger: GGGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTTACTCCCCGACCTCTaGCTCCAGGCACCTTGGACT +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSLLPDL*LQAPWT
Trigger: AGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp CCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTaGCCAGCAATGGGCAGTCCCATCCCTACCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PALTMLATVPSS*PAMGSPIPTPN
Trigger: GTTGGGGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWKYRRE*GSRRGG
Trigger: GCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTT...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCTTCCCACTTTGTTGTaGACCTCACAAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPLPTLL*TSQDTG
Trigger: GCCTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGTGCCAGCGTCTGCCTaGGTCACCGACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFVPASA*VTDFSS
Trigger: GCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCAC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGTGGTGTGCTCCCAATaGAACACTCCACCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPVVCSQ*NTPPCH
Trigger: GTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCAC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTCCCGGCTATAGGTGTTaGGCTGGGCATAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFPGYRC*AGHSRW
Trigger: CCAGCGGCTATGCCCAGCTCAACACCTATAGCCGGG...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGATCCCTCTGCATGCTaGCAGACAGCTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGDPSAC*QTAVHS
Trigger: ACTGTGGACAGCTGTCTGTCAGCATGCAGAGGGATC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCTCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEISPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCGTCCCGGAACCAGATaGTGGTGGCAGCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATRPGTR*WWQQAS
Trigger: CGAAGCCTGCTGCCACCATCATCTGGTTCCGGGACG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCRSRGQ*SSSVSG
Trigger: GCCTGACACAGAGCTACTTCACTGTCCTCTACTCCT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCCTTCACGAGGGAAGTaGCCGTGGCTCAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGPSRGK*PWLSQN
Trigger: ATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGACTTTGCGACTGCCTTTaGGGCGCCGGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRLCDCL*GAGRGR
Trigger: TCTTCCTCTACCGGCGCCGCAAAGGCAGTCGCAAAG...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWSSRSE*IVSGSR
Trigger: CCGAGAGCCACTTACGATGCATTCTGACCGGGAGGA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWLHDPG*CGDAGG
Trigger: ACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGCTGTTCGCTCCCTTCTaGAGTACCCTGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGLFAPF*STLRKE
Trigger: CTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAG...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCCTGTGCCTTCCAGGGTaGTTGTTTGACACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCLCLPG*LFDTQE
Trigger: CTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAG...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGCTCCCCTTGCAAGCTaGTCCTTCTCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATAPLAS*SFSGRG
Trigger: GCCCCTGCCTGAGAAGGAGCAGCTTGCAAGGGGAGC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTCCACCGGCTCCCCTTaGAAGCTGCTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQSTGSP*KLLLLR
Trigger: CCTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGA...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGTCCACCGGCTCCCCTTaGAAGCTGCTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGSTGSP*KLLLLR
Trigger: CCTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGA...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGTGGTCAGCTGGCTCCTaGCTGAAGCGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLWSAGS*LKRVWV
Trigger: GACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCA...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACACCGTCTGGTCAGCTaGCTCCTGGCTGAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITHRLVS*LLAEAG
Trigger: ACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPILLHRL*LNGQGH
Trigger: GTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAG...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACGATTCGAGGCACGATaGCCCGGCAGGTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITRFEAR*PGRCRC
Trigger: GCACCTACACCTGCCGGGCCATCGTGCCTCGAATCG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCCCCACTGCCTGAGTTaGTCCTCTCCACTGTATAGC +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGPHCLS*SSPLYS
Trigger: GCTATACAGTGGAGAGGACCAACTCAGGCAGTGGGG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGATGATGGCTGTGCCTaGCCCGAAGCTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGDDGCA*PEAVPG
Trigger: GCCTGGAACAGCTTCGGGCCAGGCACAGCCATCATC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACCCTCCCGGGTGTCGATaGTGTCGCAGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYPPGCR*CRSAGP
Trigger: AGGACCTGCGCTGCGACACCATCGACACCCGGGAGG...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGHRALP*KTGGLH
Trigger: ATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGCTGGGCATAGCCGCTaGAGTGGGAGAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITAGHSR*SGRDGM
Trigger: CATCCCGTCTCTCCCACTCCAGCGGCTATGCCCAGC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGCAGGGCCAGGGGGTGTaGGCTCAGGGCCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMQGQGV*AQGHSQ
Trigger: CTGACTATGGCCCTGAGCCCACACCCCCTGGCCCTG...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCGTAGGACAGCTGGCTaGTTGTGTCAGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVRRTAG*LCQCQL
Trigger: CAGCTGGCACTGACACAACCAGCCAGCTGTCCTACG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCAGCCCAGTCGGTAGGTaGGGTACCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNASPVGR*GTQLPQ
Trigger: CTGGGGCAGCTGGGTACCCCACCTACCGACTGGGCT...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCGCCCCAGCCAGGCTCTaGCCCCTACACGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAAPARL*PLHVSL
Trigger: CAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGC...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGACAGCTGTCCACAGTaGGTAGCCAAGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVDSCPQ*VAKVTG
Trigger: GCCAGTCACCTTGGCTACCCACTGTGGACAGCTGTC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAATCCTGGTGTCCTCTaGGGGGATGAGCACGGTGAG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRNPGVL*GDEHGE
Trigger: CTCACCGTGCTCATCCCCCCAGAGGACACCAGGATT...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGTCACTGTAGGAGGGTaGTGCACATCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWVTVGG*CTSSSM
Trigger: CATCGAGCTGGATGTGCACCACCCTCCTACAGTGAC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCTGCTTGGGGAGGAACTaGAGTTCAGCAGTAGGGACA +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCCLGRN*SSAVGT
Trigger: TGTCCCTACTGCTGAACTCCAGTTCCTCCCCAAGCA...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCAGAGGCACCAAGCAGTaGCCTGGCTCAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIRGTKQ*PGSGQT
Trigger: TGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCT...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGCAGAACTGCCCAGTATaGCCTGTGACTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGQNCPV*PVTSAQ
Trigger: CTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTG...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATGTGCCAGCGTCTGCCTaGGTCACCGACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYVPASA*VTDFSS
Trigger: GCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCAC...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGTGGTGGCCCCAGCTATaGTGCCCACAGGTAACACCT +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWWWPQL*CPQVTP
Trigger: AGGTGTTACCTGTGGGCATCATAGCTGGGGCCACCA...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCAGTAGATGGCCTTCATaGCCCGGGTTGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPISRWPS*PGLLWR
Trigger: TCTCCACAGCAACCCGGGTCATGAAGGCCATCTACT...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCCCGGCTATAGGTGTTaGGCTGGGCATAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLPGYRC*AGHSRW
Trigger: CCAGCGGCTATGCCCAGCTCAACACCTATAGCCGGG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATCTGGCCCCTACACGTaGGTCTGCATGCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQSGPYT*VCMRCW
Trigger: CCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACCGTCCCGGAACCAGATaGTGGTGGCAGCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYRPGTR*WWQQAS
Trigger: CGAAGCCTGCTGCCACCATCATCTGGTTCCGGGACG...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTCATGCTTCGGCAAGTaGAGACACGCCCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSSCFGK*RHALCP
Trigger: TGGACATAGGGCGTGTCTTCACTTGCCGAAGCATGA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGACTACCTTGGTTGCTaGTGCTTCCCTGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVDYLGC*CFPVPS
Trigger: GGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGACTACCTTGGTTGCTaGTGCTTCCCTGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQDYLGC*CFPVPS
Trigger: GGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTTCACGAGGGAAGTaGCCGTGGCTCAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIPSRGK*PWLSQN
Trigger: ATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGG...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGGAGAGCGTACCGCTTaGAGACAGGGTGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQGERTA*RQGAQM
Trigger: CATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCGAGGAGGCTCAGCATaGTGTCCGCCCGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNRGGSA*CPPAVR
Trigger: GCGCACGGCGGGCGGACAGCATGCTGAGCCTCCTCG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEITRSPS*TVCGSM
Trigger: CATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGT...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGTAGGTGCCAGCGTCTaGCTGAGTCACCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQVGASV*LSHRLQ
Trigger: CTGAAGTCGGTGACTCAGGCAGACGCTGGCACCTAC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGTAGGTGCCAGCGTCTaGCTGAGTCACCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGVGASV*LSHRLQ
Trigger: CTGAAGTCGGTGACTCAGGCAGACGCTGGCACCTAC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCCCCGGCAGGTGTAGGTaGCAGCGTCTGCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAPGRCR*QRLPES
Trigger: TGACTCAGGCAGACGCTGGCACCTACACCTGCCGGG...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCTCCAGGCCCATGCTATaGGGTCTGGGGGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNASRPML*GLGVVC
Trigger: GCACACCACCCCCAGACCGCATAGCATGGGCCTGGA...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTCCAGGCCCATGCTATaGGGTCTGGGGGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLSRPML*GLGVVC
Trigger: GCACACCACCCCCAGACCGCATAGCATGGGCCTGGA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATGGATAGCACCCCACTaGCTGAGTTGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGWIAPH*LSWSSP
Trigger: TGGAGAGGACCAACTCAGGCAGTGGGGTGCTATCCA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCTTTGCGACTGCCTTTaGGGCGCCGGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQLCDCL*GAGRGR
Trigger: TCTTCCTCTACCGGCGCCGCAAAGGCAGTCGCAAAG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATCGCAGCGCAGGTCCTaGTTCAGATCCACATCATCC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGSQRRS*FRSTSS
Trigger: GGATGATGTGGATCTGAAGCAGGACCTGCGCTGCGA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTCGCAGCGCAGGTCCTaGTTCAGATCCACATCATCC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVSQRRS*FRSTSS
Trigger: GGATGATGTGGATCTGAAGCAGGACCTGCGCTGCGA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACGGTGGGGTACCCAGCTaGCCCAGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHGGVPS*PREGMG
Trigger: TCCCATCCCTTCCCTGGGGCAGCTGGGTACCCCACC...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGGTGGGGTACCCAGCTaGCCCAGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECGGVPS*PREGMG
Trigger: TCCCATCCCTTCCCTGGGGCAGCTGGGTACCCCACC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGACACGTGAGTCTGCATaGGCTGCTGGAATCGCTGGC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWTRESA*AAGIAG
Trigger: GCCAGCGATTCCAGCAGCGCATGCAGACTCACGTGT...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGCTGTGCCTTCCAGGGTaGTTGTTTGACACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWLCLPG*LFDTQE
Trigger: CTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAG...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGCCGAGATCTAACCTTTaGAGCTTCAGGACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGPRSNL*SFRTGS
Trigger: GGACCCAGTCCTGAAGCTGCAAAGGTTAGATCTCGG...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCGCTCCCCTTGCAAGCTaGTCCTTCTCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAAPLAS*SFSGRG
Trigger: GCCCCTGCCTGAGAAGGAGCAGCTTGCAAGGGGAGC...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGCTCCCCTTGCAAGCTaGTCCTTCTCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGAPLAS*SFSGRG
Trigger: GCCCCTGCCTGAGAAGGAGCAGCTTGCAAGGGGAGC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCGGTTTGTACCAGAACTaGCCAGTATGGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCGLYQN*PVWPVT
Trigger: AGTCACAGGCCATACTGGGCAGTTCTGGTACAAACC...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCAGGCTTTGAGGCCCTaGCCCATGCCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVQALRP*PMPRAS
Trigger: GCTGGCCCTGGGCATGGGCCAGGGCCTCAAAGCCTG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGACTTCAGCAGCAGCTaGTTGCTGTTACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPDFSSS*LLLLRT
Trigger: GGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGACTTCAGCAGCAGCTaGTTGCTGTTACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWDFSSS*LLLLRT
Trigger: GGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTATGCGGTCTGGGGGTaGTGTGCTCCCAATGAAACA +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRYAVWG*CAPNET
Trigger: TGTTTCATTGGGAGCACACCACCCCCAGACCGCATA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCCATGCTATGCGGTCTaGGGGTGGTGTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQPCYAV*GWCAPN
Trigger: ATTGGGAGCACACCACCCCCAGACCGCATAGCATGG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGCCCCACTGCCTGAGTTaGTCCTCTCCACTGTATAGC +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQPHCLS*SSPLYS
Trigger: GCTATACAGTGGAGAGGACCAACTCAGGCAGTGGGG...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGTCTCGCTCTTCCAGCTaGATGATGGCTGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWSRSSS*MMAVPG
Trigger: GCCAGGCACAGCCATCATCCAGCTGGAAGAGCGAGA...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCCTCCCGGGTGTCGATaGTGTCGCAGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNPPGCR*CRSAGP
Trigger: AGGACCTGCGCTGCGACACCATCGACACCCGGGAGG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTGGGAGGAAGAAGGCTaGTCCGAGAAGGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQWEEEG*SEKGAM
Trigger: CATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCCCCCACCTGCCATGGTaGGAGGAAGAAGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAPHLPW*EEEGWS
Trigger: GGACCAGCCTTCTTCCTCCCACCATGGCAGGTGGGG...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACCCCCACCTGCCATGGTaGGAGGAAGAAGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYPHLPW*EEEGWS
Trigger: GGACCAGCCTTCTTCCTCCCACCATGGCAGGTGGGG...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGCAGGCCCAGGAGGCTaGGGCATGCACAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECAGPGG*GMHRAP
Trigger: TGGTGCTCTGTGCATGCCCCAGCCTCCTGGGCCTGC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGACAGCTGTCCACAGTaGGTAGCCAAGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQDSCPQ*VAKVTG
Trigger: GCCAGTCACCTTGGCTACCCACTGTGGACAGCTGTC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGACCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAGTTAAAGCCAGGAAGTaGGGCAGACTGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRVKARK*GRLGRG
Trigger: TCCTCTCCCCAGTCTGCCCCACTTCCTGGCTTTAAC...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGCGGGTCTGGGTCCCTTaGGAGAAAGTATCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQRVWVP*EKVSER
Trigger: TCTCTCCGATACTTTCTCCCAAGGGACCCAGACCCG...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCATGGAAGGTGTGTGTTaGATGTGCGTGCACATGGAG +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCMEGVC*MCVHME
Trigger: CTCCATGTGCACGCACATCCAACACACACCTTCCAT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGGCTGGACATGCAGCTaGGGAGGCGGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMGWTCS*GGGKQP
Trigger: TGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGAGCTACTTGCTTCCTaGGTATTATCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPELLAS*VLSGPS
Trigger: GGAAGGACCAGATAATACCCAGGAAGCAAGTAGCTC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGTTCCTTGCCAGCAATaGGCAGTCCCATCCCTACCC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPVPCQQ*AVPSLP
Trigger: GGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAAC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTGCTTGGGGAGGAACTaGAGTTCAGCAGTAGGGACA +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGCLGRN*SSAVGT
Trigger: TGTCCCTACTGCTGAACTCCAGTTCCTCCCCAAGCA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACACCAAGCAGTGGCCTaGCTCAGGTCAGACAGCACT +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQHQAVA*LRSDST
Trigger: AGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRSQHAQ*PVEAPS
Trigger: GCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCTTCAGTGTTCATTATaGCCTCGCCAGGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGLQCSL*PRQGQE
Trigger: CTCCTGACCCTGGCGAGGCCATAATGAACACTGAAG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCTTCAGTGTTCATTATaGCCTCGCCAGGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRLQCSL*PRQGQE
Trigger: CTCCTGACCCTGGCGAGGCCATAATGAACACTGAAG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGTGGTGTGCTCCCAATaGAACACTCCACCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWVVCSQ*NTPPCH
Trigger: GTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCAC...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGAGTAGATGGCCTTCATaGCCCGGGTTGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWSRWPS*PGLLWR
Trigger: TCTCCACAGCAACCCGGGTCATGAAGGCCATCTACT...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCCCGGCTATAGGTGTTaGGCTGGGCATAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNPGYRC*AGHSRW
Trigger: CCAGCGGCTATGCCCAGCTCAACACCTATAGCCGGG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATTCTGGCCCCTACACGTaGGTCTGCATGCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNSGPYT*VCMRCW
Trigger: CCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGA...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATCATGCTTCGGCAAGTaGAGACACGCCCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRSCFGK*RHALCP
Trigger: TGGACATAGGGCGTGTCTTCACTTGCCGAAGCATGA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGACAGACCTTCCCACTaGGCTCTCATAAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRDRPSH*ALIKGL
Trigger: GAGTCCTTTTATGAGAGCTCAGTGGGAAGGTCTGTC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGACAGACCTTCCCACTaGGCTCTCATAAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGDRPSH*ALIKGL
Trigger: GAGTCCTTTTATGAGAGCTCAGTGGGAAGGTCTGTC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGACAGACCTTCCCACTaGGCTCTCATAAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWDRPSH*ALIKGL
Trigger: GAGTCCTTTTATGAGAGCTCAGTGGGAAGGTCTGTC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACTACCTTGGTTGCTaGTGCTTCCCTGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWDYLGC*CFPVPS
Trigger: GGAAGGCACAGGGAAGCATCAGCAACCAAGGTAGTC...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGCTTCACCTGTTTGGTaGGAAGAACAAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWASPVW*EEQAVP
Trigger: AGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACGAGCCCTGTGGCTCCTaGCAGGTTAACGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYEPCGS*QVNERA
Trigger: TGCCCTCTCGTTAACCTGTCAGGAGCCACAGGGCTC...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCCTGGGCCTCTTCTGGTaGAATTGGACTTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPLGLFW*NWTSQN
Trigger: ATTTTGAGAAGTCCAATTTCACCAGAAGAGGCCCAG...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTAGGTGCCAGCGTCTaGCTGAGTCACCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWVGASV*LSHRLQ
Trigger: CTGAAGTCGGTGACTCAGGCAGACGCTGGCACCTAC...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCCCGGCAGGTGTAGGTaGCAGCGTCTGCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNPGRCR*QRLPES
Trigger: TGACTCAGGCAGACGCTGGCACCTACACCTGCCGGG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCTTTGCGACTGCCTTTaGGGCGCCGGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWLCDCL*GAGRGR
Trigger: TCTTCCTCTACCGGCGCCGCAAAGGCAGTCGCAAAG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQSSRSE*IVSGSR
Trigger: CCGAGAGCCACTTACGATGCATTCTGACCGGGAGGA...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCT +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQWLWRT*QWGHTP
Trigger: AGGCGTATGACCCCATTGGCAAGTACGCCACAGCCA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGACACGTGAGTCTGCATaGGCTGCTGGAATCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWTRESA*AAGIAG
Trigger: GCCAGCGATTCCAGCAGCGCATGCAGACTCACGTGT...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCAGGAGGCTGGGGCATaGACAGAGCACCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNQEAGA*TEHHPR
Trigger: CCGAGGATGGTGCTCTGTGCATGCCCCAGCCTCCTG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACTGTTCGCTCCCTTCTaGAGTACCCTGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQLFAPF*STLRKE
Trigger: CTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCTGTTCGCTCCCTTCTaGAGTACCCTGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWLFAPF*STLRKE
Trigger: CTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGLVLVH*CAAHSS
Trigger: ACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCCCCTACAGAAGGAGTaGCTGAAACCTAGGCACATA +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGPLQKE*LKPRHI
Trigger: TATGTGCCTAGGTTTCAGGCACTCCTTCTGTAGGGG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGATAACAGCACAGCACTaGTCCCATCCCTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQITAQH*SHPWPL
Trigger: AAGGGGCCAGGGATGGGAGCAGTGCTGTGCTGTTAT...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGGCACGAAACTCCAGTaGGACGTGCTCCATTTTGAA +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGGTKLQ*DVLHFE
Trigger: TTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTGGTTTGTACCAGAACTaGCCAGTATGGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSGLYQN*PVWPVT
Trigger: AGTCACAGGCCATACTGGGCAGTTCTGGTACAAACC...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCAGAGCCAATGTCTGTaGTTGTGGGTTTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGQSQCL*LWVWGQ
Trigger: TTGACCCCAAACCCACAACCACAGACATTGGCTCTG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCCATGCTATGCGGTCTaGGGGTGGTGTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATPCYAV*GWCAPN
Trigger: ATTGGGAGCACACCACCCCCAGACCGCATAGCATGG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCRMHRK*LSVHCL
Trigger: GAGACAGTGAACCGAGAGCCACTTACGATGCATTCT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATTTGCTGTGGAGACGCTaGCGGTGTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYLLWRR*RCHPPG
Trigger: ACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAA...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTTGCTGTGGAGACGCTaGCGGTGTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLLLWRR*RCHPPG
Trigger: ACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCTGTAGTAGCCATTGGTaGGGTCCTTCATCTCATACT +
Preference number: 4 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPCSSHW*GPSSHT
Trigger: AGTATGAGATGAAGGACCCCACCAATGGCTACTACA...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQHRALP*KTGGLH
Trigger: ATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWHRALP*KTGGLH
Trigger: ATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACGTAGGACAGCTGGCTaGTTGTGTCAGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITRRTAG*LCQCQL
Trigger: CAGCTGGCACTGACACAACCAGCCAGCTGTCCTACG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCGTAGGACAGCTGGCTaGTTGTGTCAGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWRRTAG*LCQCQL
Trigger: CAGCTGGCACTGACACAACCAGCCAGCTGTCCTACG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATG +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGWRTCQ*GHTPHM
Trigger: CATATGAGGCGTATGACCCCATTGGCAAGTACGCCA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRIEWL*RTCQWG
Trigger: ACCCCATTGGCAAGTACGCCACAGCCACTCGATTCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQRIEWL*RTCQWG
Trigger: ACCCCATTGGCAAGTACGCCACAGCCACTCGATTCT...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWCRRIE*LWRTCQ
Trigger: TTGGCAAGTACGCCACAGCCACTCGATTCTCCTACA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACTGGCTGGCCCAGCATaGAGGAGAAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKLAGPA*RRRKAG
Trigger: GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCTGGCTGGCCCAGCATaGAGGAGAAGGAAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLLAGPA*RRRKAG
Trigger: GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAG...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGGATGTGCGTGCACATaGAGGAGGAGAAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQGCACT*RRRNGL
Trigger: CAGGCCATTTCTCCTCCTCCATGTGCACGCACATCC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGGATGTGCGTGCACATaGAGGAGGAGAAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPGCACT*RRRNGL
Trigger: CAGGCCATTTCTCCTCCTCCATGTGCACGCACATCC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGGCTGGACATGCAGCTaGGGAGGCGGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECGWTCS*GGGKQP
Trigger: TGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGGGCGAGGAACATTTTaGGAACTGCACCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFGRGTF*ELHQRP
Trigger: GGGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGGGGCGAGGAACATTTTaGGAACTGCACCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLGRGTF*ELHQRP
Trigger: GGGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCC...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTTTGCAGCTTCAGGACTaGGTCCTGGGTCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFLQLQD*VLGLLT
Trigger: GGTCAGGAGACCCAGGACCCAGTCCTGAAGCTGCAA...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTTGGCTCCAGGCACCTTaGACTGCAGGCTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPWLQAP*TAGFTC
Trigger: ACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCA...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCACCAAGCAGTGGCCTaGCTCAGGTCAGACAGCACT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATHQAVA*LRSDST
Trigger: AGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAGAGGCACCAAGCAGTaGCCTGGCTCAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFRGTKQ*PGSGQT
Trigger: TGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGAGAGGCACCAAGCAGTaGCCTGGCTCAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLRGTKQ*PGSGQT
Trigger: TGTCTGACCTGAGCCAGGCCACTGCTTGGTGCCTCT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCAGAACTGCCCAGTATaGCCTGTGACTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIQNCPV*PVTSAQ
Trigger: CTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGCAATTCCAGAGTAGTTaGGCAGCACACAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQQFQSS*AAHRGA
Trigger: TGCTCCCCTGTGTGCTGCTCAACTACTCTGGAATTG...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR TCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCACTCAGGACCATATTTaGGTCCTTTTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCTQDHI*VLFGPG
Trigger: ACCTGGACCAAAAAGGACTCAAATATGGTCCTGAGT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGTCACTGTCTCCACCTTaGTATCCAGCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGSLSPP*YPASSG
Trigger: CCCTGAGGAAGCTGGATATCAAGGTGGAGACAGTGA...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGTCTGGCCCCTACACGTaGGTCTGCATGCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVSGPYT*VCMRCW
Trigger: CCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGA...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGATCAGGGAACAGCTGTaGAAGCCTTCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLIREQL*KPSPLP
Trigger: GGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGAT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCCGAGAAGGGAGCAATaGGCAATGCCCCTGAATATC +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQPRREQ*AMPLNI
Trigger: GATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATCAGAAAGTGGTGGCTaGGAAGCAGTCACATGGAAG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRSESGG*EAVTWK
Trigger: CTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATCAGAAAGTGGTGGCTaGGAAGCAGTCACATGGAAG +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGSESGG*EAVTWK
Trigger: CTTCCATGTGACTGCTTCTCAGCCACCACTTTCTGA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTCCAGGGTGCTTGTTTaGCACCCAAGAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATSRVLV*HPRGSS
Trigger: ACTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTTCCAGGGTGCTTGTTTaGCACCCAAGAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFSRVLV*HPRGSS
Trigger: ACTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGA...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGACAGCAAAGCTCTGTaGTCAAGGACGCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQDSKAL*SRTPST
Trigger: AGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCACAAGCCACCAAAGGTaGTCAGGATCACCAACTACT +
Preference number: 4 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPTSHQR*SGSPTT
Trigger: AGTAGTTGGTGATCCTGATCACCTTTGGTGGCTTGT...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGACAAGCCACCAAAGGTaGTCAGGATCACCAACTACT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGTSHQR*SGSPTT
Trigger: AGTAGTTGGTGATCCTGATCACCTTTGGTGGCTTGT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTCCTTCACGAGGGAAGTaGCCGTGGCTCAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPPSRGK*PWLSQN
Trigger: ATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGG...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGGAGAGCGTACCGCTTaGAGACAGGGTGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGGERTA*RQGAQM
Trigger: CATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGAGCCCTGTGGCTCCTaGCAGGTTAACGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECEPCGS*QVNERA
Trigger: TGCCCTCTCGTTAACCTGTCAGGAGCCACAGGGCTC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGCCCAGTATGGCCTGTaGCTTCTGCGCAGCAATTAT +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGAQYGL*LLRSNY
Trigger: ATAATTGCTGCGCAGAAGTCACAGGCCATACTGGGC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGTRSPS*TVCGSM
Trigger: CATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCACAGCATACTGCACTaGCTCACTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGHSILH*LTGDDG
Trigger: CCCATCATCTCCAGTGAGGCAGTGCAGTATGCTGTG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCCCCTCACAGCATACTaGACTGCCTCACTGGAGATG +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATPLTAY*TASLEM
Trigger: CATCTCCAGTGAGGCAGTGCAGTATGCTGTGAGGGG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTCCAGGCCCATGCTATaGGGTCTGGGGGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFSRPML*GLGVVC
Trigger: GCACACCACCCCCAGACCGCATAGCATGGGCCTGGA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCTCCTTCCAGGCCCATaGTATGCGGTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSLLPGP*YAVWGW
Trigger: CCACCCCCAGACCGCATAGCATGGGCCTGGAAGGAG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTGGATAGCACCCCACTaGCTGAGTTGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWWIAPH*LSWSSP
Trigger: TGGAGAGGACCAACTCAGGCAGTGGGGTGCTATCCA...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTTGGATAGCACCCCACTaGCTGAGTTGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPWIAPH*LSWSSP
Trigger: TGGAGAGGACCAACTCAGGCAGTGGGGTGCTATCCA...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAACACGTGAGTCTGCATaGGCTGCTGGAATCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRTRESA*AAGIAG
Trigger: GCCAGCGATTCCAGCAGCGCATGCAGACTCACGTGT...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCAACTCCAGACACTaGTTTTTAGGAAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPANSRH*FLGRRG
Trigger: GCCTCGCCTTCCTAAAAAGCAGTGTCTGGAGTTGGC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGCCAACTCCAGACACTaGTTTTTAGGAAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWANSRH*FLGRRG
Trigger: GCCTCGCCTTCCTAAAAAGCAGTGTCTGGAGTTGGC...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCTGATGCTTCCCTGTaGCTTCCAGGGTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPADASL*LPGCLF
Trigger: AAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAGTGCATACTATGTCCTaGCCTGGCAAAAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRVHTMS*PGKRHL
Trigger: AAGGTGCCTTTTGCCAGGGCAGGACATAGTATGCAC...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACCCCTACAGAAGGAGTaGCTGAAACCTAGGCACATA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGPLQKE*LKPRHI
Trigger: TATGTGCCTAGGTTTCAGGCACTCCTTCTGTAGGGG...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACCAGGCACCTTGGACTaGAGGCTTCACCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITPGTLD*RLHLFG
Trigger: ACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTAGGCAGGGGCAGCTGTaGTTACTCCCCGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSRQGQL*LLPDLW
Trigger: CCAGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCT...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTCCACCGGCTCCCCTTaGAAGCTGCTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHSTGSP*KLLLLR
Trigger: CCTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGGCCAGCCCGTCCTTaGTCCATTGCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLGPARP*SIAQFQ
Trigger: CTGGAATTGTGCAATGGACCAAGGACGGGCTGGCCC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGGGCCAGCCCGTCCTTaGTCCATTGCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGGPARP*SIAQFQ
Trigger: CTGGAATTGTGCAATGGACCAAGGACGGGCTGGCCC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGTCAAGAAACCCCCTTTaGCCCACCTGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWSRNPL*PTCSPR
Trigger: TCTTGGGCTACAGGTGGGCCAAAGGGGGTTTCTTGA...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTCTGTGGTTGTGGGTTTaGGGTCAACTACAATCCGGG +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPLWLWV*GQLQSG
Trigger: CCCGGATTGTAGTTGACCCCAAACCCACAACCACAG...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCTGTGGTTGTGGGTTTaGGGTCAACTACAATCCGGG +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWLWLWV*GQLQSG
Trigger: CCCGGATTGTAGTTGACCCCAAACCCACAACCACAG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCAGAGCCAATGTCTGTaGTTGTGGGTTTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVQSQCL*LWVWGQ
Trigger: TTGACCCCAAACCCACAACCACAGACATTGGCTCTG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCGATTCGAGGCACGATaGCCCGGCAGGTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVRFEAR*PGRCRC
Trigger: GCACCTACACCTGCCGGGCCATCGTGCCTCGAATCG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTTATGCGGTCTGGGGGTaGTGTGCTCCCAATGAAACA +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPYAVWG*CAPNET
Trigger: TGTTTCATTGGGAGCACACCACCCCCAGACCGCATA...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCCATGCTATGCGGTCTaGGGGTGGTGTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYPCYAV*GWCAPN
Trigger: ATTGGGAGCACACCACCCCCAGACCGCATAGCATGG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGATGATGGCTGTGCCTaGCCCGAAGCTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLDDGCA*PEAVPG
Trigger: GCCTGGAACAGCTTCGGGCCAGGCACAGCCATCATC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTCTCGCTCTTCCAGCTaGATGATGGCTGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYSRSSS*MMAVPG
Trigger: GCCAGGCACAGCCATCATCCAGCTGGAAGAGCGAGA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGRMHRK*LSVHCL
Trigger: GAGACAGTGAACCGAGAGCCACTTACGATGCATTCT...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCAGGGCCAGGGGGTGTaGGCTCAGGGCCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNQGQGV*AQGHSQ
Trigger: CTGACTATGGCCCTGAGCCCACACCCCCTGGCCCTG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACGTCATACGCCTCATATaGGGTCCGCTCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYVIRLI*GPLQAR
Trigger: TCTGGCCTGGAGCGGACCCCATATGAGGCGTATGAC...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTCATACGCCTCATATaGGGTCCGCTCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLVIRLI*GPLQAR
Trigger: TCTGGCCTGGAGCGGACCCCATATGAGGCGTATGAC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAGTCATACGCCTCATATaGGGTCCGCTCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRVIRLI*GPLQAR
Trigger: TCTGGCCTGGAGCGGACCCCATATGAGGCGTATGAC...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATG +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQWRTCQ*GHTPHM
Trigger: CATATGAGGCGTATGACCCCATTGGCAAGTACGCCA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGATGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGCRRIE*LWRTCQ
Trigger: TTGGCAAGTACGCCACAGCCACTCGATTCTCCTACA...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGGGACGGGGTGTTTCTaGGAGACCTGCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSGTGCF*ETCSPP
Trigger: AGGTGGGGAGCAGGTCTCCCAGAAACACCCCGTCCC...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGGMEYS*KPVNAP
Trigger: TGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCC...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGAAAAGCTATTCCACTaGGCCCATCAGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVEKLFH*AHQVGS
Trigger: GGAACCTACCTGATGGGCCCAGTGGAATAGCTTTTC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGTTCCTTGCCAGCAATaGGCAGTCCCATCCCTACCC +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQVPCQQ*AVPSLP
Trigger: GGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAAC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTGGCTCCAGGCACCTTaGACTGCAGGCTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYWLQAP*TAGFTC
Trigger: ACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATTACTCCCCGACCTCTaGCTCCAGGCACCTTGGACT +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGLLPDL*LQAPWT
Trigger: AGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGTTACTCCCCGACCTCTaGCTCCAGGCACCTTGGACT +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMLLPDL*LQAPWT
Trigger: AGTCCAAGGTGCCTGGAGCCAGAGGTCGGGGAGTAA...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQSQHAQ*PVEAPS
Trigger: GCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATGGGAGCCAGGAGGCCTaGGCCCCATATTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNGSQEA*APYLSP
Trigger: AGGACTCAAATATGGGGCCCAGGCCTCCTGGCTCCC...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368172.1
CDS-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTCAATTCCAGAGTAGTTaGGCAGCACACAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPQFQSS*AAHRGA
Trigger: TGCTCCCCTGTGTGCTGCTCAACTACTCTGGAATTG...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR TCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGAGAGCTCAGCATCTGTaGTCTCCAGGTTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWRAQHL*SPGCTA
Trigger: GGCAGTACAACCTGGAGATCACAGATGCTGAGCTCT...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR TCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCTTCCCACTTTGTTGTaGACCTCACAAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEILPTLL*TSQDTG
Trigger: GCCTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTGGTGTGCTCCCAATaGAACACTCCACCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLVVCSQ*NTPPCH
Trigger: GTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCAC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAAGTAGATGGCCTTCATaGCCCGGGTTGCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGSRWPS*PGLLWR
Trigger: TCTCCACAGCAACCCGGGTCATGAAGGCCATCTACT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCCCGGCTATAGGTGTTaGGCTGGGCATAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNPGYRC*AGHSRW
Trigger: CCAGCGGCTATGCCCAGCTCAACACCTATAGCCGGG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCCGAGAAGGGAGCAATaGGCAATGCCCCTGAATATC +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWPRREQ*AMPLNI
Trigger: GATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCCGAGAAGGGAGCAATaGGCAATGCCCCTGAATATC +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLPRREQ*AMPLNI
Trigger: GATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGG...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPINEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACGATCCCTCTGCATGCTaGCAGACAGCTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYDPSAC*QTAVHS
Trigger: ACTGTGGACAGCTGTCTGTCAGCATGCAGAGGGATC...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGCAGTATCTGGGTCAATaGGGACATGGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQQYLGQ*GHGPSL
Trigger: AAGGCTAGGACCATGTCCTCATTGACCCAGATACTG...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAAAGTGCTTGGAGACTaGAAGAGTAATGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGKVLGD*KSNGGC
Trigger: ACACCCTCCATTACTCTTTCAGTCTCCAAGCACTTT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCATGAATTATGAATGGTaGCCACGGAGAAAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIMNYEW*PRRKGE
Trigger: CTCGCCCTTTCTCCGTGGTCACCATTCATAATTCAT...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGGAGTTTTCCCTGCTaGAATGAAGGAGGATGCACA +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRSFPC*NEGGCT
Trigger: TGTGCATCCTCCTTCATTTCAGCAGGGAAAACTCCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGACAAGCCACCAAAGGTaGTCAGGATCACCAACTACT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVTSHQR*SGSPTT
Trigger: AGTAGTTGGTGATCCTGATCACCTTTGGTGGCTTGT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCAAACCCATCAGAAATaGGTGGGGAGCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGQTHQK*VGSSTD
Trigger: ATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGCAAACCCATCAGAAATaGGTGGGGAGCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQQTHQK*VGSSTD
Trigger: ATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTG...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGATCTGTGGCTGGACTTTaGGGGATCCAGAATTTAGGA +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRSVAGL*GIQNLG
Trigger: TCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGA...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGCCCAGTATGGCCTGTaGCTTCTGCGCAGCAATTAT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATAQYGL*LLRSNY
Trigger: ATAATTGCTGCGCAGAAGTCACAGGCCATACTGGGC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGACTGGCAGGAATGAGTaGCAGTTCTATGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGTGRNE*QFYANG
Trigger: TCCATTTGCATAGAACTGTCACTCATTCCTGCCAGT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHTRSPS*TVCGSM
Trigger: CATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGT...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCATAT +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPISAAAG*CYSGPY
Trigger: ATATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGA...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCACAGCATACTGCACTaGCTCACTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLHSILH*LTGDDG
Trigger: CCCATCATCTCCAGTGAGGCAGTGCAGTATGCTGTG...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATGGATAGCACCCCACTaGCTGAGTTGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGWIAPH*LSWSSP
Trigger: TGGAGAGGACCAACTCAGGCAGTGGGGTGCTATCCA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLSSRSE*IVSGSR
Trigger: CCGAGAGCCACTTACGATGCATTCTGACCGGGAGGA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATTCGCAGCGCAGGTCCTaGTTCAGATCCACATCATCC +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYSQRRS*FRSTSS
Trigger: GGATGATGTGGATCTGAAGCAGGACCTGCGCTGCGA...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGGACCTGCTCCCCACCTaGCATGGTGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVDLLPT*HGGRKK
Trigger: CTTCTTCCTCCCACCATGGCAGGTGGGGAGCAGGTC...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCTGTTCGCTCCCTTCTaGAGTACCCTGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLLFAPF*STLRKE
Trigger: CTCCTTCCTCAGGGTACTGCAGAAGGGAGCGAACAG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCTGTGCCTTCCAGGGTaGTTGTTTGACACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWLCLPG*LFDTQE
Trigger: CTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGGCAAAAGGCACCTTTaGAAACCCATCAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRGKRHL*KPIRNE
Trigger: CTCATTTCTGATGGGTTTGCAAAGGTGCCTTTTGCC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACCCCTACAGAAGGAGTaGCTGAAACCTAGGCACATA +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQPLQKE*LKPRHI
Trigger: TATGTGCCTAGGTTTCAGGCACTCCTTCTGTAGGGG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCCCAGGCACCTTGGACTaGAGGCTTCACCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAPGTLD*RLHLFG
Trigger: ACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGG...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAGGCTTTTTGCTTCATaGAAACTCTGTGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGRLFAS*KLCGWT
Trigger: AGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCCT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTAGGCTTTTTGCTTCATaGAAACTCTGTGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSRLFAS*KLCGWT
Trigger: AGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCCT...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTATTGGGATTTTGGCTaGTCTTTCCCCAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWYWDFG*SFPRVR
Trigger: CCTAACTCTGGGGAAAGAGCAGCCAAAATCCCAATA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATGGCTGAAGCGGGTCTaGGTCCTTACCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGWLKRV*VLTLGE
Trigger: TTCTCCCAAGGTAAGGACCCAGACCCGCTTCAGCCA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR CCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHLLHRL*LNGQGH
Trigger: GTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAG...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLLLHRL*LNGQGH
Trigger: GTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAG...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGTCAAGAAACCCCCTTTaGCCCACCTGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLSRNPL*PTCSPR
Trigger: TCTTGGGCTACAGGTGGGCCAAAGGGGGTTTCTTGA...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGACTTCAGCAGCAGCTaGTTGCTGTTACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATDFSSS*LLLLRT
Trigger: GGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTATGCGGTCTGGGGGTaGTGTGCTCCCAATGAAACA +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATYAVWG*CAPNET
Trigger: TGTTTCATTGGGAGCACACCACCCCCAGACCGCATA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGTTGCTGTGGAGACGCTaGCGGTGTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVLLWRR*RCHPPG
Trigger: ACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAA...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTGTAGTAGCCATTGGTaGGGTCCTTCATCTCATACT +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSCSSHW*GPSSHT
Trigger: AGTATGAGATGAAGGACCCCACCAATGGCTACTACA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYHRALP*KTGGLH
Trigger: ATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATGTCATACGCCTCATATaGGGTCCGCTCCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNVIRLI*GPLQAR
Trigger: TCTGGCCTGGAGCGGACCCCATATGAGGCGTATGAC...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGGGTTAATAAGCAGTTaGCTCACGGTGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATGLISS*LTVVSL
Trigger: GAGGGAGACCACCGTGAGCCAACTGCTTATTAACCC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGGACTTGTATTTGGGTaGGGGAATCCCTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQGLVFG*GNPYSF
Trigger: AAAGCTGTAGGGATTCCCCCACCCAAATACAAGTCC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGTGTTAGGAACCCCATaGAGAAGAATAGGTACTACC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWVLGTP*RRIGTT
Trigger: GGTAGTACCTATTCTTCTCCATGGGGTTCCTAACAC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGATGGAAGGTGTGTGTTaGATGTGCGTGCACATGGAG +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQMEGVC*MCVHME
Trigger: CTCCATGTGCACGCACATCCAACACACACCTTCCAT...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGAGCTACTTGCTTCCTaGGTATTATCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGELLAS*VLSGPS
Trigger: GGAAGGACCAGATAATACCCAGGAAGCAAGTAGCTC...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIGMEYS*KPVNAP
Trigger: TGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCC...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTCTGTGTCAGGCTTCTaGAAACTAGGCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRSVSGF*KLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATTTGCAGCTTCAGGACTaGGTCCTGGGTCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNLQLQD*VLGLLT
Trigger: GGTCAGGAGACCCAGGACCCAGTCCTGAAGCTGCAA...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGTTCCTTGCCAGCAATaGGCAGTCCCATCCCTACCC +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKVPCQQ*AVPSLP
Trigger: GGGTAGGGATGGGACTGCCCATTGCTGGCAAGGAAC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTAGAACAAGCTGTCCCTaGGCCAGAGGAATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPRTSCP*ARGMFL
Trigger: TAGGAACATTCCTCTGGCCCAGGGACAGCTTGTTCT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTACTGATTCCGTTTTATaGAGCCCTGTGGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPTDSVL*SPVAPD
Trigger: GTCAGGAGCCACAGGGCTCCATAAAACGGAATCAGT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGCAGAACTGCCCAGTATaGCCTGTGACTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMQNCPV*PVTSAQ
Trigger: CTGCGCAGAAGTCACAGGCCATACTGGGCAGTTCTG...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGACCACAGGGAGCCCTaGGCCTCTTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMDHREP*ASSGEI
Trigger: AATTTCACCAGAAGAGGCCCAGGGCTCCCTGTGGTC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACAGAGCTCAGCATCTGTaGTCTCCAGGTTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYRAQHL*SPGCTA
Trigger: GGCAGTACAACCTGGAGATCACAGATGCTGAGCTCT...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR TCA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGHLLKC*HWCFPL
Trigger: AAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGTGGTGGCCCCAGCTATaGTGCCCACAGGTAACACCT +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVWWPQL*CPQVTP
Trigger: AGGTGTTACCTGTGGGCATCATAGCTGGGGCCACCA...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATCTGGCCCCTACACGTaGGTCTGCATGCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKSGPYT*VCMRCW
Trigger: CCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGATCCCTCTGCATGCTaGCAGACAGCTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECDPSAC*QTAVHS
Trigger: ACTGTGGACAGCTGTCTGTCAGCATGCAGAGGGATC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLRSRGQ*SSSVSG
Trigger: GCCTGACACAGAGCTACTTCACTGTCCTCTACTCCT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTCCAGGGTGCTTGTTTaGCACCCAAGAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHSRVLV*HPRGSS
Trigger: ACTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTCGACGTGCTCCATTTTaGAAGCAGATAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPRRAPF*KQIKLP
Trigger: GGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCG...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTGTATATTGAGACACTaGTTCCGTTTTATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSCILRH*FRFMEP
Trigger: GGGCTCCATAAAACGGAATCAGTGTCTCAATATACA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGCCTGGGCCCCATATTTaGGTCCTTTTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMPGPHI*VLFGPG
Trigger: ACCTGGACCAAAAAGGACTCAAATATGGGGCCCAGG...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368172.1
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGACAAACTCATTTCCCTaGCCTCCGATTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRTNSFP*PPILFI
Trigger: GATAAAGAGAATCGGAGGGCAGGGAAATGAGTTTGT...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR GCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVTRSPS*TVCGSM
Trigger: CATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGT...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACACAGCATACTGCACTaGCTCACTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQHSILH*LTGDDG
Trigger: CCCATCATCTCCAGTGAGGCAGTGCAGTATGCTGTG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCCCCTCACAGCATACTaGACTGCCTCACTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNPLTAY*TASLEM
Trigger: CATCTCCAGTGAGGCAGTGCAGTATGCTGTGAGGGG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAATCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKSSRSE*IVSGSR
Trigger: CCGAGAGCCACTTACGATGCATTCTGACCGGGAGGA...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECWLWRT*QWGHTP
Trigger: AGGCGTATGACCCCATTGGCAAGTACGCCACAGCCA...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCT +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLWLWRT*QWGHTP
Trigger: AGGCGTATGACCCCATTGGCAAGTACGCCACAGCCA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGAAAGCCTTCTCCTCTaGCCCGCAGAGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNESLLL*PAEMPQ
Trigger: CTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGGGAATGCTAAAAAGTaGCCCCCTCTGCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITGNAKK*PPLLSL
Trigger: TAGGGAAAGCAGAGGGGGGCACTTTTTAGCATTCCC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWLVLVH*CAAHSS
Trigger: ACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFLVLVH*CAAHSS
Trigger: ACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAG...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCTGTGTTGGATGTGCGTaGACATGGAGGAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEICVGCA*TWRRRN
Trigger: ATTTCTCCTCCTCCATGTGCACGCACATCCAACACA...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCTCAACAATTCTCCCTaGACCATCAGCTCAATTACC +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVLNNSP*TISSIT
Trigger: GGTAATTGAGCTGATGGTGCAGGGAGAATTGTTGAG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGAGGCATCACCATGTTaGAGGACTCCAGGATTCGAC +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMEASPC*RTPGFD
Trigger: GTCGAATCCTGGAGTCCTGCAACATGGTGATGCCTC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCCGAGATCTAACCTTTaGAGCTTCAGGACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYPRSNL*SFRTGS
Trigger: GGACCCAGTCCTGAAGCTGCAAAGGTTAGATCTCGG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTGCATACTATGTCCTaGCCTGGCAAAAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWVHTMS*PGKRHL
Trigger: AAGGTGCCTTTTGCCAGGGCAGGACATAGTATGCAC...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGAGGCTTTTTGCTTCATaGAAACTCTGTGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVRLFAS*KLCGWT
Trigger: AGTCCAGCCACAGAGTTTGCATGAAGCAAAAAGCCT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACATAACAGCACAGCACTaGTCCCATCCCTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHITAQH*SHPWPL
Trigger: AAGGGGCCAGGGATGGGAGCAGTGCTGTGCTGTTAT...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCATAACAGCACAGCACTaGTCCCATCCCTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECITAQH*SHPWPL
Trigger: AAGGGGCCAGGGATGGGAGCAGTGCTGTGCTGTTAT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTACAAAGATGAGCCAATaGCTTTCACAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSTKMSQ*LSQKAW
Trigger: CCAGGCTTTTTGTGAAAGGCATTGGCTCATCTTTGT...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGGTTTGTACCAGAACTaGCCAGTATGGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFGLYQN*PVWPVT
Trigger: AGTCACAGGCCATACTGGGCAGTTCTGGTACAAACC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGATCCGGGGAGCAAAGTaGACATTTACTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVIRGAK*TFTKVL
Trigger: CAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGAT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGACTGTGGTTGTGGGTTTaGGGTCAACTACAATCCGGG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGLWLWV*GQLQSG
Trigger: CCCGGATTGTAGTTGACCCCAAACCCACAACCACAG...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCAATGTCTGTGGTTGTaGGTTTGGGGTCAACTACAA +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIQCLWL*VWGQLQ
Trigger: TTGTAGTTGACCCCAAACCCACAACCACAGACATTG...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATGACTTCAGCAGCAGCTaGTTGCTGTTACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYDFSSS*LLLLRT
Trigger: GGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTC...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACGATTCGAGGCACGATaGCCCGGCAGGTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKRFEAR*PGRCRC
Trigger: GCACCTACACCTGCCGGGCCATCGTGCCTCGAATCG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGATGATGGCTGTGCCTaGCCCGAAGCTGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNDDGCA*PEAVPG
Trigger: GCCTGGAACAGCTTCGGGCCAGGCACAGCCATCATC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTCTCGCTCTTCCAGCTaGATGATGGCTGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFSRSSS*MMAVPG
Trigger: GCCAGGCACAGCCATCATCCAGCTGGAAGAGCGAGA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPRMHRK*LSVHCL
Trigger: GAGACAGTGAACCGAGAGCCACTTACGATGCATTCT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCGTAGGACAGCTGGCTaGTTGTGTCAGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFRRTAG*LCQCQL
Trigger: CAGCTGGCACTGACACAACCAGCCAGCTGTCCTACG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATG +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWWRTCQ*GHTPHM
Trigger: CATATGAGGCGTATGACCCCATTGGCAAGTACGCCA...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCAAGCCTGCCCATCCCTaGGTACCCCCATTTCCACTT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECKPAHP*VPPFPL
Trigger: AAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGAGAGGAGGCTTGTGTaGCTCCCTCTAGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQERRLV*LPLVLV
Trigger: AACCAACACTAGAGGGAGCCACACAAGCCTCCTCTC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACGAGAGGAGGCTTGTGTaGCTCCCTCTAGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYERRLV*LPLVLV
Trigger: AACCAACACTAGAGGGAGCCACACAAGCCTCCTCTC...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGAGAGGAGGCTTGTGTaGCTCCCTCTAGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLERRLV*LPLVLV
Trigger: AACCAACACTAGAGGGAGCCACACAAGCCTCCTCTC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGAGAGGAGGCTTGTGTaGCTCCCTCTAGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGERRLV*LPLVLV
Trigger: AACCAACACTAGAGGGAGCCACACAAGCCTCCTCTC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGTCACTGTAGGAGGGTaGTGCACATCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLVTVGG*CTSSSM
Trigger: CATCGAGCTGGATGTGCACCACCCTCCTACAGTGAC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTACAGGTTCTCCTTaGAGCGCCTGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLGTGSP*SACSLW
Trigger: CCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGGTACAGGTTCTCCTTaGAGCGCCTGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMGTGSP*SACSLW
Trigger: CCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGGTACAGGTTCTCCTTaGAGCGCCTGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQGTGSP*SACSLW
Trigger: CCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTTAGGAAGGCGAGGCTaGGGCAGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFLGRRG*GRGTGS
Trigger: AGAACCTGTACCCCTGCCCCAGCCTCGCCTTCCTAA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGTTCCTGGGTATTATCTaGTCCTTCCTACAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQFLGII*SFLQGV
Trigger: AACCCCTTGTAGGAAGGACCAGATAATACCCAGGAA...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAATCAGCTTCCAGGGATaGAATACAGCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITISFQG*NTAGSL
Trigger: CAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGAT...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGGCAGAGACTACCTTaGTTGCTGATGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLGQRLP*LLMLPC
Trigger: ACAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGGGCAGAGACTACCTTaGTTGCTGATGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMGQRLP*LLMLPC
Trigger: ACAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGCCCATCAGAAATGAGTaGGGAGCAGCACAGATGACC +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMPIRNE*GAAQMT
Trigger: GGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGG...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGACCCATCAGAAATGAGTaGGGAGCAGCACAGATGACC +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRPIRNE*GAAQMT
Trigger: GGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGG...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTAGAACAAGCTGTCCCTaGGCCAGAGGAATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPRTSCP*ARGMFL
Trigger: TAGGAACATTCCTCTGGCCCAGGGACAGCTTGTTCT...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTGCAAACTCTGTGGCTaGACTTTGAGGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQCKLCG*TLRDPE
Trigger: TTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGACTGATTCCGTTTTATaGAGCCCTGTGGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWTDSVL*SPVAPD
Trigger: GTCAGGAGCCACAGGGCTCCATAAAACGGAATCAGT...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATGCTTGGGGAGGAACTaGAGTTCAGCAGTAGGGACA +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQCLGRN*SSAVGT
Trigger: TGTCCCTACTGCTGAACTCCAGTTCCTCCCCAAGCA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCACCAAGCAGTGGCCTaGCTCAGGTCAGACAGCACT +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVHQAVA*LRSDST
Trigger: AGTGCTGTCTGACCTGAGCCAGGCCACTGCTTGGTG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTTCAATTACATCCCTTaGCCTGTGCACTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWFNYIP*PVHFSV
Trigger: AACACTGAAGTGCACAGGCCAAGGGATGTAATTGAA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTTGCAATGCCAAGAATaGCTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRLQCQE*LGRKCD
Trigger: GTCACATTTTCTACCCAGCCATTCTTGGCATTGCAA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp GATCCTCCTCAAGATCCAGAATGTATTCCAAAGCTGTaGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: DPPQDPECIPKL*YPFPSTGSPCK
Trigger: CTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACATTCTGGATCTTGAGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp ATGGCCTCGCCAGGGTCAGGAGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCACAGTGGCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: MASPGSGASLIL*GNSQHAQWPVE
Trigger: CTCTACAGGCCACTGTGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGCTCCTGACCCTGGCGAGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGAAGACACAGGCTCCGTaGAAAAGGAATAATCCACAT +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVKTQAP*KRNNPH
Trigger: ATGTGGATTATTCCTTTTTCACGGAGCCTGTGTCTT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTACTCAGGACCATATTTaGGTCCTTTTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPTQDHI*VLFGPG
Trigger: ACCTGGACCAAAAAGGACTCAAATATGGTCCTGAGT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGACTCAGGACCATATTTaGGTCCTTTTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQTQDHI*VLFGPG
Trigger: ACCTGGACCAAAAAGGACTCAAATATGGTCCTGAGT...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGCTCTTCCAGCTGGATaGTGGCTGTGCCTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNALPAG*WLCLAR
Trigger: TCGGGCCAGGCACAGCCATCATCCAGCTGGAAGAGC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTCACTGTCTCCACCTTaGTATCCAGCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHSLSPP*YPASSG
Trigger: CCCTGAGGAAGCTGGATATCAAGGTGGAGACAGTGA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGGGAAGGGATGGGAGTTaGACTTCTCATAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLGRDGS*TSHSSR
Trigger: ACGAGAACTATGAGAAGTTCAACTCCCATCCCTTCC...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAATGAAGACTGGATTTaGATGCAGTGCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFNEDWI*MQCQGC
Trigger: ACAGCCCTGGCACTGCATTCAAATCCAGTCTTCATT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATCTCCACCAGGACCCTaGCTTATCTGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKSPPGP*LIWLAQ
Trigger: CTGGGCCAGCCAGATAAGTCAGGGTCCTGGTGGAGA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAATGAATTATGAATGGTaGCCACGGAGAAAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITMNYEW*PRRKGE
Trigger: CTCGCCCTTTCTCCGTGGTCACCATTCATAATTCAT...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGAGCGAACATGAATTATaGATGGTGACCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQSEHEL*MVTTEK
Trigger: TTTCTCCGTGGTCACCATTCATAATTCATGTTCGCT...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATAGGAGTAGAGGACAGTaGAGTAGCTCTGTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNRSRGQ*SSSVSG
Trigger: GCCTGACACAGAGCTACTTCACTGTCCTCTACTCCT...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGACAGCAAAGCTCTGTaGTCAAGGACGCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECDSKAL*SRTPST
Trigger: AGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGACAAACCCATCAGAAATaGGTGGGGAGCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRQTHQK*VGSSTD
Trigger: ATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTG...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCGCTTCACCTGTTTGGTaGGAAGAACAAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAASPVW*EEQAVP
Trigger: AGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGC...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGGCTTCACCTGTTTGGTaGGAAGAACAAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMASPVW*EEQAVP
Trigger: AGGGACAGCTTGTTCTTCTCACCAAACAGGTGAAGC...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCTGTATATTGAGACACTaGTTCCGTTTTATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPICILRH*FRFMEP
Trigger: GGGCTCCATAAAACGGAATCAGTGTCTCAATATACA...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCATAT +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPSAAAG*CYSGPY
Trigger: ATATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGA...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKLHDPG*CGDAGG
Trigger: ACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTCGCAGCGCAGGTCCTaGTTCAGATCCACATCATCC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSSQRRS*FRSTSS
Trigger: GGATGATGTGGATCTGAAGCAGGACCTGCGCTGCGA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCT +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVWLWRT*QWGHTP
Trigger: AGGCGTATGACCCCATTGGCAAGTACGCCACAGCCA...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCCTAGTGTTGGTTCACTaGTGTGCAGCACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNALVLVH*CAAHSS
Trigger: ACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAG...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTACAGCGCCCTCCTGCTaGGTCCCGTCCCGGAACCAG +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACTAPSC*VPSRNQ
Trigger: CTGGTTCCGGGACGGGACGCAGCAGGAGGGCGCTGT...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACCTTCAGCAATTCCGTaGTGGCCACAGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKPSAIP*WPQRPP
Trigger: AGGAGGGCGCTGTGGCCAGCACGGAATTGCTGAAGG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACTCAACAATTCTCCCTaGACCATCAGCTCAATTACC +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQLNNSP*TISSIT
Trigger: GGTAATTGAGCTGATGGTGCAGGGAGAATTGTTGAG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGAGGCATCACCATGTTaGAGGACTCCAGGATTCGAC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLEASPC*RTPGFD
Trigger: GTCGAATCCTGGAGTCCTGCAACATGGTGATGCCTC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCCGAGATCTAACCTTTaGAGCTTCAGGACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNPRSNL*SFRTGS
Trigger: GGACCCAGTCCTGAAGCTGCAAAGGTTAGATCTCGG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCATAGTTTTAGGTTTATaGAACCCTCCCCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCIVLGL*NPPPSF
Trigger: AAATGAAGGGGGAGGGTTGCATAAACCTAAAACTAT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGGCAAAAGGCACCTTTaGAAACCCATCAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQGKRHL*KPIRNE
Trigger: CTCATTTCTGATGGGTTTGCAAAGGTGCCTTTTGCC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCCAGGCACCTTGGACTaGAGGCTTCACCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVPGTLD*RLHLFG
Trigger: ACCAAACAGGTGAAGCCTGCAGTCCAAGGTGCCTGG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATAGGCAGGGGCAGCTGTaGTTACTCCCCGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNRQGQL*LLPDLW
Trigger: CCAGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCT...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGTATTGGGATTTTGGCTaGTCTTTCCCCAGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGYWDFG*SFPRVR
Trigger: CCTAACTCTGGGGAAAGAGCAGCCAAAATCCCAATA...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTCAAGAAACCCCCTTTaGCCCACCTGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECSRNPL*PTCSPR
Trigger: TCTTGGGCTACAGGTGGGCCAAAGGGGGTTTCTTGA...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTATCCGGGGAGCAAAGTaGACATTTACTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPIRGAK*TFTKVL
Trigger: CAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGAT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCAATGTCTGTGGTTGTaGGTTTGGGGTCAACTACAA +
Preference number: 4 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIQCLWL*VWGQLQ
Trigger: TTGTAGTTGACCCCAAACCCACAACCACAGACATTG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCAATGTCTGTGGTTGTaGGTTTGGGGTCAACTACAA +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWQCLWL*VWGQLQ
Trigger: TTGTAGTTGACCCCAAACCCACAACCACAGACATTG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACAGAGCCAATGTCTGTaGTTGTGGGTTTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQQSQCL*LWVWGQ
Trigger: TTGACCCCAAACCCACAACCACAGACATTGGCTCTG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTATGCGGTCTGGGGGTaGTGTGCTCCCAATGAAACA +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECYAVWG*CAPNET
Trigger: TGTTTCATTGGGAGCACACCACCCCCAGACCGCATA...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCCCCACTGCCTGAGTTaGTCCTCTCCACTGTATAGC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSPHCLS*SSPLYS
Trigger: GCTATACAGTGGAGAGGACCAACTCAGGCAGTGGGG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCCCCACTGCCTGAGTTaGTCCTCTCCACTGTATAGC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFPHCLS*SSPLYS
Trigger: GCTATACAGTGGAGAGGACCAACTCAGGCAGTGGGG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTGTAGTAGCCATTGGTaGGGTCCTTCATCTCATACT +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQCSSHW*GPSSHT
Trigger: AGTATGAGATGAAGGACCCCACCAATGGCTACTACA...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLWRTCQ*GHTPHM
Trigger: CATATGAGGCGTATGACCCCATTGGCAAGTACGCCA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLRIEWL*RTCQWG
Trigger: ACCCCATTGGCAAGTACGCCACAGCCACTCGATTCT...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLCRRIE*LWRTCQ
Trigger: TTGGCAAGTACGCCACAGCCACTCGATTCTCCTACA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACCCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGTTAAAGCCAGGAAGTaGGGCAGACTGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSVKARK*GRLGRG
Trigger: TCCTCTCCCCAGTCTGCCCCACTTCCTGGCTTTAAC...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTGTTAAAGCCAGGAAGTaGGGCAGACTGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFVKARK*GRLGRG
Trigger: TCCTCTCCCCAGTCTGCCCCACTTCCTGGCTTTAAC...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATCAGCAATTCCGTGCTaGCCACAGCGCCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKSAIPC*PQRPPA
Trigger: AGCAGGAGGGCGCTGTGGCCAGCACGGAATTGCTGA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGGACTTGTATTTGGGTaGGGGAATCCCTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATGLVFG*GNPYSF
Trigger: AAAGCTGTAGGGATTCCCCCACCCAAATACAAGTCC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTTGGTCAGAAAGTGGTaGCTGAGAAGCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATLVRKW*LRSSHM
Trigger: CATGTGACTGCTTCTCAGCCACCACTTTCTGACCAA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGATCAGCTTCCAGGGATaGAATACAGCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMISFQG*NTAGSL
Trigger: CAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGAT...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCCCATCAGAAATGAGTaGGGAGCAGCACAGATGACC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLPIRNE*GAAQMT
Trigger: GGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGG...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTTGCAAACTCTGTGGCTaGACTTTGAGGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFCKLCG*TLRDPE
Trigger: TTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCA...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCTTCTTCAAACCCAAATaGCTGAACATTGCTATGAAC +
Preference number: 4 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCFFKPK*LNIAMN
Trigger: GTTCATAGCAATGTTCAGCCATTTGGGTTTGAAGAA...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTCTCAACATGCACAGTaGCCTGTAGAGGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLSQHAQ*PVEAPS
Trigger: GCTTGGTGCCTCTACAGGCCACTGTGCATGTTGAGA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGGAGTTTTACTGTATTaGGATTTTGGCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PEEGERHPGHECRQQRDWGVLLY*DFGCSF
Trigger: GAAAGAGCAGCCAAAATCCCAATACAGTAAAACTCC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCCTTCCCACTTTGTTGTaGACCTCACAAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECLPTLL*TSQDTG
Trigger: GCCTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAG...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTCACTGTCTCCACCTTaGTATCCAGCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSSLSPP*YPASSG
Trigger: CCCTGAGGAAGCTGGATATCAAGGTGGAGACAGTGA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGGAAGGGATGGGAGTTaGACTTCTCATAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQGRDGS*TSHSSR
Trigger: ACGAGAACTATGAGAAGTTCAACTCCCATCCCTTCC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCGGAAGGGATGGGAGTTaGACTTCTCATAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAGRDGS*TSHSSR
Trigger: ACGAGAACTATGAGAAGTTCAACTCCCATCCCTTCC...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCCGAGAAGGGAGCAATaGGCAATGCCCCTGAATATC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSPRREQ*AMPLNI
Trigger: GATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCCTTCTGCAGTACCCTaGGGAAGGAGAGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNPSAVP*GRREAP
Trigger: GGGTGCCTCTCTCCTTCCTCAGGGTACTGCAGAAGG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGCAGTATCTGGGTCAATaGGGACATGGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLQYLGQ*GHGPSL
Trigger: AAGGCTAGGACCATGTCCTCATTGACCCAGATACTG...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCACAGGTCTGGCAACCTaGATGTTTAAAAATGGATTC +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPITGLAT*MFKNGF
Trigger: GAATCCATTTTTAAACATTCAGGTTGCCAGACCTGT...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGATGAATTATGAATGGTaGCCACGGAGAAAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLMNYEW*PRRKGE
Trigger: CTCGCCCTTTCTCCGTGGTCACCATTCATAATTCAT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTTTTTCCCTGCTGAAATaGAGGAGGATGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPFSLLK*RRMHRL
Trigger: AAGTCTGTGCATCCTCCTTCATTTCAGCAGGGAAAA...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGCAGACTGGCAGGAATaGGTGACAGTTCTATGCAAA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGADWQE*VTVLCK
Trigger: TTTGCATAGAACTGTCACTCATTCCTGCCAGTCTGC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGCAGACTGGCAGGAATaGGTGACAGTTCTATGCAAA +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQADWQE*VTVLCK
Trigger: TTTGCATAGAACTGTCACTCATTCCTGCCAGTCTGC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAAGGGTCAGGCAAGAGTaGAGGTCAGAAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKRVRQE*RSEETH
Trigger: ATGTGTCTCTTCTGACCTGCACTCTTGCCTGACCCT...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACTCAACAATTCTCCCTaGACCATCAGCTCAATTACC +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITLNNSP*TISSIT
Trigger: GGTAATTGAGCTGATGGTGCAGGGAGAATTGTTGAG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTGAGGCATCACCATGTTaGAGGACTCCAGGATTCGAC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFEASPC*RTPGFD
Trigger: GTCGAATCCTGGAGTCCTGCAACATGGTGATGCCTC...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGGCAAAAGGCACCTTTaGAAACCCATCAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFGKRHL*KPIRNE
Trigger: CTCATTTCTGATGGGTTTGCAAAGGTGCCTTTTGCC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGAACAATATCCCTATGTaGATACTATGTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQNNIPM*ILCPAL
Trigger: CAGGGCAGGACATAGTATGCACATAGGGATATTGTT...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGCGCTTGAAGACAGGGTaGTCAGATGTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLRLKTG*SDVFIP
Trigger: TGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCG...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGGCACGAAACTCCAGTaGGACGTGCTCCATTTTGAA +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKGTKLQ*DVLHFE
Trigger: TTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGGCACGAAACTCCAGTaGGACGTGCTCCATTTTGAA +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLGTKLQ*DVLHFE
Trigger: TTCAAAATGGAGCACGTCGCACTGGAGTTTCGTGCC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCAAATGGCTGAACATTaGTATGAACATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRQMAEH*YEHRSC
Trigger: ACATGACCTATGTTCATAGCAATGTTCAGCCATTTG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTATCCGGGGAGCAAAGTaGACATTTACTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFIRGAK*TFTKVL
Trigger: CAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGAT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCAGAGCCAATGTCTGTaGTTGTGGGTTTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNQSQCL*LWVWGQ
Trigger: TTGACCCCAAACCCACAACCACAGACATTGGCTCTG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACATGTAGTAGCCATTGGTaGGGTCCTTCATCTCATACT +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITCSSHW*GPSSHT
Trigger: AGTATGAGATGAAGGACCCCACCAATGGCTACTACA...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTAGCCCAGTCGGTAGGTaGGGTACCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACSPVGR*GTQLPQ
Trigger: CTGGGGCAGCTGGGTACCCCACCTACCGACTGGGCT...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSRIEWL*RTCQWG
Trigger: ACCCCATTGGCAAGTACGCCACAGCCACTCGATTCT...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAGACAGCTGTCCACAGTaGGTAGCCAAGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKDSCPQ*VAKVTG
Trigger: GCCAGTCACCTTGGCTACCCACTGTGGACAGCTGTC...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCCTGACTTATCTGGCTaGCCCAGCATGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNPDLSG*PSMEEK
Trigger: CTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATTGGCTGAAGCGGGTCTaGGTCCCTTGGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNWLKRV*VPWEKV
Trigger: TACTTTCTCCCAAGGGACCCAGACCCGCTTCAGCCA...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CCA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTGTGTTAGGAACCCCATaGAGAAGAATAGGTACTACC +
Preference number: 4 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPVLGTP*RRIGTT
Trigger: GGTAGTACCTATTCTTCTCCATGGGGTTCCTAACAC...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGGATGTGCGTGCACATaGAGGAGGAGAAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNGCACT*RRRNGL
Trigger: CAGGCCATTTCTCCTCCTCCATGTGCACGCACATCC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAATTGGTCAGAAAGTGGTaGCTGAGAAGCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQLVRKW*LRSSHM
Trigger: CATGTGACTGCTTCTCAGCCACCACTTTCTGACCAA...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATTAGGAAGGCGAGGCTaGGGCAGGGGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKLGRRG*GRGTGS
Trigger: AGAACCTGTACCCCTGCCCCAGCCTCGCCTTCCTAA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAGAGCTACTTGCTTCCTaGGTATTATCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGELLAS*VLSGPS
Trigger: GGAAGGACCAGATAATACCCAGGAAGCAAGTAGCTC...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGAAAAGCTATTCCACTaGGCCCATCAGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKEKLFH*AHQVGS
Trigger: GGAACCTACCTGATGGGCCCAGTGGAATAGCTTTTC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGGAGTTTTACTGTATTaGGATTTTGGCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQGVLLY*DFGCSF
Trigger: GAAAGAGCAGCCAAAATCCCAATACAGTAAAACTCC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTGCTAACAAGATTGTGTaGAGTTTTACTGTATTGGGA +
Preference number: 4 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSANKIV*SFTVLG
Trigger: TCCCAATACAGTAAAACTCCACACAATCTTGTTAGC...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGTTGCAATGCCAAGAATaGCTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGLQCQE*LGRKCD
Trigger: GTCACATTTTCTACCCAGCCATTCTTGGCATTGCAA...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp CACACAACCGCCCACATAGGGTCGGTCATCCAAAGCTaGACACTCAAGGCACTGAAAGTGGAAGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: HTTAHIGSVIQS*TLKALKVEEGI
Trigger: GATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCTATGTGGGCGGTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp TTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTaGTTTGACACCCAAGAGGCTCCAGTTACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LVADASLCLPGC*FDTQEAPVTLL
Trigger: TAACAAGGTAACTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp CAGGACTGGGTCCTGGGTCTCCTGACCTTTAGTCCCTaGCTCTTTCCACTAAAACAAGCCACCAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QDWVLGLLTFSP*LFPLKQATKGD
Trigger: ATCACCTTTGGTGGCTTGTTTTAGTGGAAAGAGCAAGGGACTAAAGGTCAGGAGACCCAGGACCCAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCTTCCCACTTTGTTGTaGACCTCACAAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSLPTLL*TSQDTG
Trigger: GCCTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGGTGGCCCCAGCTATaGTGCCCACAGGTAACACCT +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNWWPQL*CPQVTP
Trigger: AGGTGTTACCTGTGGGCATCATAGCTGGGGCCACCA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATTCACTGTCTCCACCTTaGTATCCAGCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNSLSPP*YPASSG
Trigger: CCCTGAGGAAGCTGGATATCAAGGTGGAGACAGTGA...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGGAAGGGATGGGAGTTaGACTTCTCATAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECGRDGS*TSHSSR
Trigger: ACGAGAACTATGAGAAGTTCAACTCCCATCCCTTCC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCAGCGAACATGAATTATaGATGGTGACCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATSEHEL*MVTTEK
Trigger: TTTCTCCGTGGTCACCATTCATAATTCATGTTCGCT...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATTTTTCCCTGCTGAAATaGAGGAGGATGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYFSLLK*RRMHRL
Trigger: AAGTCTGTGCATCCTCCTTCATTTCAGCAGGGAAAA...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTCTGTGGCTGGACTTTaGGGGATCCAGAATTTAGGA +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHSVAGL*GIQNLG
Trigger: TCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGA...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTCGACGTGCTCCATTTTaGAAGCAGATAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSRRAPF*KQIKLP
Trigger: GGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCG...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGCGACGTGCTCCATTTTaGAAGCAGATAAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVRRAPF*KQIKLP
Trigger: GGGGAGCTTTATCTGCTTTCAAAATGGAGCACGTCG...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAACTGGCAGGAATGAGTaGCAGTTCTATGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQTGRNE*QFYANG
Trigger: TCCATTTGCATAGAACTGTCACTCATTCCTGCCAGT...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGCAGACTGGCAGGAATaGGTGACAGTTCTATGCAAA +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLADWQE*VTVLCK
Trigger: TTTGCATAGAACTGTCACTCATTCCTGCCAGTCTGC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCTGGGCCTCTTCTGGTaGAATTGGACTTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYLGLFW*NWTSQN
Trigger: ATTTTGAGAAGTCCAATTTCACCAGAAGAGGCCCAG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCCCGGCAGGTGTAGGTaGCAGCGTCTGCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACPGRCR*QRLPES
Trigger: TGACTCAGGCAGACGCTGGCACCTACACCTGCCGGG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGCCAACTCCAGACACTaGTTTTTAGGAAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNANSRH*FLGRRG
Trigger: GCCTCGCCTTCCTAAAAAGCAGTGTCTGGAGTTGGC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAAAATTAGAGCTACTTaGTTCCTGGGTATTATCTGG +
Preference number: 4 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRKIRAT*FLGIIW
Trigger: CCAGATAATACCCAGGAAGCAAGTAGCTCTAATTTT...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAATAGTTTTAGGTTTATaGAACCCTCCCCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGIVLGL*NPPPSF
Trigger: AAATGAAGGGGGAGGGTTGCATAAACCTAAAACTAT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACGCTTGAAGACAGGGTaGTCAGATGTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQRLKTG*SDVFIP
Trigger: TGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGACGCTTGAAGACAGGGTaGTCAGATGTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGRLKTG*SDVFIP
Trigger: TGGAATGAAAACATCTGAGCACCCTGTCTTCAAGCG...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGAAACTCCAGTGCGACGTaGTCCATTTTGAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRNSSAT*SILKAD
Trigger: ATCTGCTTTCAAAATGGAGCACGTCGCACTGGAGTT...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAACATCCCTTGGCCTGTaGACTTCAGTGTTCATTATG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGTSLGL*TSVFIM
Trigger: CATAATGAACACTGAAGTGCACAGGCCAAGGGATGT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGACAAAGATGAGCCAATaGCTTTCACAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLTKMSQ*LSQKAW
Trigger: CCAGGCTTTTTGTGAAAGGCATTGGCTCATCTTTGT...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLLHRL*LNGQGH
Trigger: GTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHRMHRK*LSVHCL
Trigger: GAGACAGTGAACCGAGAGCCACTTACGATGCATTCT...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGCACACAGCAGTATCTaGGTCAATGAGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSAHSSI*VNEDMV
Trigger: GACCATGTCCTCATTGACCCAGATACTGCTGTGTGC...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAGTTAAAGCCAGGAAGTaGGGCAGACTGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKVKARK*GRLGRG
Trigger: TCCTCTCCCCAGTCTGCCCCACTTCCTGGCTTTAAC...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTTGGTCAGAAAGTGGTaGCTGAGAAGCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLLVRKW*LRSSHM
Trigger: CATGTGACTGCTTCTCAGCCACCACTTTCTGACCAA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGGCTGGACATGCAGCTaGGGAGGCGGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACGWTCS*GGGKQP
Trigger: TGGCTGTTTCCCGCCTCCCCAGCTGCATGTCCAGCC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGATTCCTGGGTATTATCTaGTCCTTCCTACAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRFLGII*SFLQGV
Trigger: AACCCCTTGTAGGAAGGACCAGATAATACCCAGGAA...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTTCCTGGGTATTATCTaGTCCTTCCTACAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYFLGII*SFLQGV
Trigger: AACCCCTTGTAGGAAGGACCAGATAATACCCAGGAA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGGGGATGGAATACAGCTaGAAGCCTGTAAATGCCCCA +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVGMEYS*KPVNAP
Trigger: TGGGGCATTTACAGGCTTCCAGCTGTATTCCATCCC...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCTTTGGATTCCCCCATaGTTTCTGGTTTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWLWIPP*FLVFVK
Trigger: TTTCACAAAAACCAGAAACCATGGGGGAATCCAAAG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTCTGTGTCAGGCTTCTaGAAACTAGGCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYSVSGF*KLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTTGCAGCTTCAGGACTaGGTCCTGGGTCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNLQLQD*VLGLLT
Trigger: GGTCAGGAGACCCAGGACCCAGTCCTGAAGCTGCAA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATTTTGTGTTGCTGTTTaGGATAAAGGGGTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGFCVAV*DKGVPG
Trigger: ACCAGGGACCCCTTTATCCCAAACAGCAACACAAAA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCTTTTGTGTTGCTGTTTaGGATAAAGGGGTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VCVGCACTWRRRNGLCNAFCVAV*DKGVPG
Trigger: ACCAGGGACCCCTTTATCCCAAACAGCAACACAAAA...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGAGAACAAGCTGTCCCTaGGCCAGAGGAATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVRTSCP*ARGMFL
Trigger: TAGGAACATTCCTCTGGCCCAGGGACAGCTTGTTCT...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGGCTCCAGGCACCTTaGACTGCAGGCTTCACCTGT +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNWLQAP*TAGFTC
Trigger: ACAGGTGAAGCCTGCAGTCCAAGGTGCCTGGAGCCA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTACTGATTCCGTTTTATaGAGCCCTGTGGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFTDSVL*SPVAPD
Trigger: GTCAGGAGCCACAGGGCTCCATAAAACGGAATCAGT...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTTCAATTACATCCCTTaGCCTGTGCACTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ACDFCAAIISPGTGPEATFNYIP*PVHFSV
Trigger: AACACTGAAGTGCACAGGCCAAGGGATGTAATTGAA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACATTCAATTACATCCCTTaGCCTGTGCACTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITFNYIP*PVHFSV
Trigger: AACACTGAAGTGCACAGGCCAAGGGATGTAATTGAA...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGGAGTTTTACTGTATTaGGATTTTGGCTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQGVLLY*DFGCSF
Trigger: GAAAGAGCAGCCAAAATCCCAATACAGTAAAACTCC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCTTCTCAAAATTTTCTaGGTCACTGTTGCTAACAAG +
Preference number: 4 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVLLKIF*VTVANK
Trigger: CTTGTTAGCAACAGTGACCCAGAAAATTTTGAGAAG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACATTGCAATGCCAAGAATaGCTGGGTAGAAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITLQCQE*LGRKCD
Trigger: GTCACATTTTCTACCCAGCCATTCTTGGCATTGCAA...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNKYRRE*GSRRGG
Trigger: GCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTT...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLHLLKC*HWCFPL
Trigger: AAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAACATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: TLVADASLCLPGCLFDTQHLLKC*HWCFPL
Trigger: AAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATG...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTACAGGTCTGGCAACCTaGATGTTTAAAAATGGATTC +
Preference number: 4 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFTGLAT*MFKNGF
Trigger: GAATCCATTTTTAAACATTCAGGTTGCCAGACCTGT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATAGCGAACATGAATTATaGATGGTGACCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYSEHEL*MVTTEK
Trigger: TTTCTCCGTGGTCACCATTCATAATTCATGTTCGCT...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATACTGGCAGGAATGAGTaGCAGTTCTATGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNTGRNE*QFYANG
Trigger: TCCATTTGCATAGAACTGTCACTCATTCCTGCCAGT...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACACAAACTCATTTCCCTaGCCTCCGATTCTCTTTATC +
Preference number: 4 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYTNSFP*PPILFI
Trigger: GATAAAGAGAATCGGAGGGCAGGGAAATGAGTTTGT...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR GCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCCCCTCACAGCATACTaGACTGCCTCACTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNPLTAY*TASLEM
Trigger: CATCTCCAGTGAGGCAGTGCAGTATGCTGTGAGGGG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTAAGACTGGATTTGAATaGAGTGCCAGGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSKTGFE*SARAVL
Trigger: CAGAACAGCCCTGGCACTGCATTCAAATCCAGTCTT...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTGTGTTGGATGTGCGTaGACATGGAGGAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFCVGCA*TWRRRN
Trigger: ATTTCTCCTCCTCCATGTGCACGCACATCCAACACA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAAAATTAGAGCTACTTaGTTCCTGGGTATTATCTGG +
Preference number: 4 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQKIRAT*FLGIIW
Trigger: CCAGATAATACCCAGGAAGCAAGTAGCTCTAATTTT...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATAACAATATCCCTATGTaGATACTATGTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYNNIPM*ILCPAL
Trigger: CAGGGCAGGACATAGTATGCACATAGGGATATTGTT...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGAACTCCAGTGCGACGTaGTCCATTTTGAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLNSSAT*SILKAD
Trigger: ATCTGCTTTCAAAATGGAGCACGTCGCACTGGAGTT...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACAACTCCAGTGCGACGTaGTCCATTTTGAAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHNSSAT*SILKAD
Trigger: ATCTGCTTTCAAAATGGAGCACGTCGCACTGGAGTT...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCAAATGGCTGAACATTaGTATGAACATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWQMAEH*YEHRSC
Trigger: ACATGACCTATGTTCATAGCAATGTTCAGCCATTTG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACAAATGGCTGAACATTaGTATGAACATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: RRAQGPSILNKASGWGQQQMAEH*YEHRSC
Trigger: ACATGACCTATGTTCATAGCAATGTTCAGCCATTTG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCACATCCCTTGGCCTGTaGACTTCAGTGTTCATTATG +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECTSLGL*TSVFIM
Trigger: CATAATGAACACTGAAGTGCACAGGCCAAGGGATGT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAACAAAGATGAGCCAATaGCTTTCACAAAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGTKMSQ*LSQKAW
Trigger: CCAGGCTTTTTGTGAAAGGCATTGGCTCATCTTTGT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTCTGGGTCCTTACCTTaGGAGAAAGTATCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSSGSLP*EKVSER
Trigger: TCTCTCCGATACTTTCTCCCAAGGTAAGGACCCAGA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATCAAGAAACCCCCTTTaGCCCACCTGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKSRNPL*PTCSPR
Trigger: TCTTGGGCTACAGGTGGGCCAAAGGGGGTTTCTTGA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATATCCGGGGAGCAAAGTaGACATTTACTAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNIRGAK*TFTKVL
Trigger: CAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGAT...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATTGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNCRRIE*LWRTCQ
Trigger: TTGGCAAGTACGCCACAGCCACTCGATTCTCCTACA...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACCCCATTTCCACTTATaGGAGATCAGAGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKPHFHL*EIRGVG
Trigger: TCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAGGGTTAATAAGCAGTTaGCTCACGGTGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKGLISS*LTVVSL
Trigger: GAGGGAGACCACCGTGAGCCAACTGCTTATTAACCC...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGTCACTGTAGGAGGGTaGTGCACATCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNVTVGG*CTSSSM
Trigger: CATCGAGCTGGATGTGCACCACCCTCCTACAGTGAC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTTTTGTGTTGCTGTTTaGGATAAAGGGGTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLFCVAV*DKGVPG
Trigger: ACCAGGGACCCCTTTATCCCAAACAGCAACACAAAA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTGCAAACTCTGTGGCTaGACTTTGAGGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSCKLCG*TLRDPE
Trigger: TTCTGGATCCCTCAAAGTCCAGCCACAGAGTTTGCA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCGTCTTGGCTTTAATGTaGTTTTCTTCAAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: CHSHPLPYFMSLGQSLPIVLALM*FSSNPN
Trigger: ATTTGGGTTTGAAGAAAACCACATTAAAGCCAAGAC...GATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCTTCTCAAAATTTTCTaGGTCACTGTTGCTAACAAG +
Preference number: 4 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQLLKIF*VTVANK
Trigger: CTTGTTAGCAACAGTGACCCAGAAAATTTTGAGAAG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGACCACAGGGAGCCCTaGGCCTCTTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNDHREP*ASSGEI
Trigger: AATTTCACCAGAAGAGGCCCAGGGCTCCCTGTGGTC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAAAGACACAGGCTCCGTaGAAAAGGAATAATCCACAT +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKKTQAP*KRNNPH
Trigger: ATGTGGATTATTCCTTTTTCACGGAGCCTGTGTCTT...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCAAGACACAGGCTCCGTaGAAAAGGAATAATCCACAT +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECKTQAP*KRNNPH
Trigger: ATGTGGATTATTCCTTTTTCACGGAGCCTGTGTCTT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKHLLKC*HWCFPL
Trigger: AAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAACAGTATCTGGGTCAATaGGGACATGGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKQYLGQ*GHGPSL
Trigger: AAGGCTAGGACCATGTCCTCATTGACCCAGATACTG...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTAAAGTGCTTGGAGACTaGAAGAGTAATGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSKVLGD*KSNGGC
Trigger: ACACCCTCCATTACTCTTTCAGTCTCCAAGCACTTT...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTTTTCCCTGCTGAAATaGAGGAGGATGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFFSLLK*RRMHRL
Trigger: AAGTCTGTGCATCCTCCTTCATTTCAGCAGGGAAAA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGACAGCAAAGCTCTGTaGTCAAGGACGCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNDSKAL*SRTPST
Trigger: AGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCATAT +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNSAAAG*CYSGPY
Trigger: ATATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGA...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR GCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAGTGCATACTATGTCCTaGCCTGGCAAAAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKVHTMS*PGKRHL
Trigger: AAGGTGCCTTTTGCCAGGGCAGGACATAGTATGCAC...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGAACAATATCCCTATGTaGATACTATGTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLNNIPM*ILCPAL
Trigger: CAGGGCAGGACATAGTATGCACATAGGGATATTGTT...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGGACTTGTATTTGGGTaGGGGAATCCCTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNGLVFG*GNPYSF
Trigger: AAAGCTGTAGGGATTCCCCCACCCAAATACAAGTCC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAATCAGCTTCCAGGGATaGAATACAGCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKISFQG*NTAGSL
Trigger: CAGGCTTCCAGCTGTATTCCATCCCTGGAAGCTGAT...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACKYRRE*GSRRGG
Trigger: GCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTT...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTAAGACACAGGCTCCGTaGAAAAGGAATAATCCACAT +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSKTQAP*KRNNPH
Trigger: ATGTGGATTATTCCTTTTTCACGGAGCCTGTGTCTT...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTTGATCCCAGCTGAATaGAGACTGGATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSLIPAE*RLDLNA
Trigger: TGCATTCAAATCCAGTCTTCATTCAGCTGGGATCAA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCACAGGTCTGGCAACCTaGATGTTTAAAAATGGATTC +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECTGLAT*MFKNGF
Trigger: GAATCCATTTTTAAACATTCAGGTTGCCAGACCTGT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAATCTGTGGCTGGACTTTaGGGGATCCAGAATTTAGGA +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKSVAGL*GIQNLG
Trigger: TCCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGA...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTGTATATTGAGACACTaGTTCCGTTTTATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFCILRH*FRFMEP
Trigger: GGGCTCCATAAAACGGAATCAGTGTCTCAATATACA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCTGGGCCTCTTCTGGTaGAATTGGACTTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNLGLFW*NWTSQN
Trigger: ATTTTGAGAAGTCCAATTTCACCAGAAGAGGCCCAG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATACATCCCTTGGCCTGTaGACTTCAGTGTTCATTATG +
Preference number: 4 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNTSLGL*TSVFIM
Trigger: CATAATGAACACTGAAGTGCACAGGCCAAGGGATGT...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAACTTTGGATTCCCCCATaGTTTCTGGTTTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKLWIPP*FLVFVK
Trigger: TTTCACAAAAACCAGAAACCATGGGGGAATCCAAAG...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGAAAAGCTATTCCACTaGGCCCATCAGGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNEKLFH*AHQVGS
Trigger: GGAACCTACCTGATGGGCCCAGTGGAATAGCTTTTC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGTTCTTCAAACCCAAATaGCTGAACATTGCTATGAAC +
Preference number: 4 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMFFKPK*LNIAMN
Trigger: GTTCATAGCAATGTTCAGCCATTTGGGTTTGAAGAA...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCTTGGCTTTAATGTaGTTTTCTTCAAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWVLALM*FSSNPN
Trigger: ATTTGGGTTTGAAGAAAACCACATTAAAGCCAAGAC...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGACTTCTCAAAATTTTCTaGGTCACTGTTGCTAACAAG +
Preference number: 4 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGLLKIF*VTVANK
Trigger: CTTGTTAGCAACAGTGACCCAGAAAATTTTGAGAAG...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGACCACAGGGAGCCCTaGGCCTCTTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACDHREP*ASSGEI
Trigger: AATTTCACCAGAAGAGGCCCAGGGCTCCCTGTGGTC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAAAAGTGCTTGGAGACTaGAAGAGTAATGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKKVLGD*KSNGGC
Trigger: ACACCCTCCATTACTCTTTCAGTCTCCAAGCACTTT...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR TCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATAGGAGTTTTCCCTGCTaGAATGAAGGAGGATGCACA +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNRSFPC*NEGGCT
Trigger: TGTGCATCCTCCTTCATTTCAGCAGGGAAAACTCCT...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCTTTGGATTCCCCCATaGTTTCTGGTTTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFLWIPP*FLVFVK
Trigger: TTTCACAAAAACCAGAAACCATGGGGGAATCCAAAG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTTCTTCAAACCCAAATaGCTGAACATTGCTATGAAC +
Preference number: 4 (lower is better)
Translates to: VPPFPLMGDQRGGIERECFFKPK*LNIAMN
Trigger: GTTCATAGCAATGTTCAGCCATTTGGGTTTGAAGAA...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCTTCAGTGTTCATTATaGCCTCGCCAGGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACLQCSL*PRQGQE
Trigger: CTCCTGACCCTGGCGAGGCCATAATGAACACTGAAG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CAGGATTCGACAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTAACAAGATTGTGTaGAGTTTTACTGTATTGGGA +
Preference number: 4 (lower is better)
Translates to: QDSTAKLCDQGRLPLPRKANKIV*SFTVLG
Trigger: TCCCAATACAGTAAAACTCCACACAATCTTGTTAGC...TTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTGTCGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp ACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTaGGCTTTAATGTGGTTTTCTTCAAACCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: TAKNKAVRSKRV*ALMWFSSNPNG
Trigger: GCCATTTGGGTTTGAAGAAAACCACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR GCA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAAAATTAGAGCTACTTaGTTCCTGGGTATTATCTGG +
Preference number: 4 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFKIRAT*FLGIIW
Trigger: CCAGATAATACCCAGGAAGCAAGTAGCTCTAATTTT...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCAATGTCTGTGGTTGTaGGTTTGGGGTCAACTACAA +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNQCLWL*VWGQLQ
Trigger: TTGTAGTTGACCCCAAACCCACAACCACAGACATTG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGTGTTAGGAACCCCATaGAGAAGAATAGGTACTACC +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACVLGTP*RRIGTT
Trigger: GGTAGTACCTATTCTTCTCCATGGGGTTCCTAACAC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTTCTGTGTCAGGCTTCTaGAAACTAGGCTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACSVSGF*KLGFLS
Trigger: AGAAAGGAAGCCTAGTTTCCAGAAGCCTGACACAGA...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGTCTTGGCTTTAATGTaGTTTTCTTCAAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: LGGENSTGARNGGCNAKNVLALM*FSSNPN
Trigger: ATTTGGGTTTGAAGAAAACCACATTAAAGCCAAGAC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CCA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTGCTAACAAGATTGTGTaGAGTTTTACTGTATTGGGA +
Preference number: 4 (lower is better)
Translates to: IVIINKGRFVPELPSMACANKIV*SFTVLG
Trigger: TCCCAATACAGTAAAACTCCACACAATCTTGTTAGC...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
3UTR CAA 72 bp TTATTATTATTATTGTTATTATTAATAAGGGCAGGTTaGTACCAGAACTGCCCAGTATGGCCTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLIRAG*YQNCPVWPVTS
Trigger: AGAAGTCACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAATAATAATAATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp AGTGAGGATCCAGACGAGGAGGCTCAGCATGCTGTCCGCCCGCCGTaGGCCCGCCCGCGGCTGGGGCCCGGAGTTGGCGAGCGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SEDPDEEAQHAVRPP*ARPRLGPGVGERAR
Trigger: TCTGGCTCGCTCGCCAACTCCGGGCCCCAGCCGCGGGCGGGCGCACGGCGGGCGGACAGCATGCTGAGCCTCCTCGTCTGGATCCTCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS CCA 90 bp AGCAGCACACAGGGGAGCACGGCCCGCTGTCCAGCCACCACCGTCTaGTCAGCTGGCTCCTGGCTGAAGCGGGTCTGGGTCCCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSTQGSTARCPATTV*SAGSWLKRVWVPWE
Trigger: CTCCCAAGGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCGGGCCGTGCTCCCCTGTGTGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS CCA 90 bp AGCAGCACACAGGGGAGCACGGCCCGCTGTCCAGCCACCACCGTCTaGTCAGCTGGCTCCTGGCTGAAGCGGGTCTGGGTCCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: SSTQGSTARCPATTV*SAGSWLKRVWVLTL
Trigger: CAAGGTAAGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCGGGCCGTGCTCCCCTGTGTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS TCA 90 bp TGGGCTCAGGGCCATAGTCAGAGGCAGGGCCCCGGCTATAGGTGTTaGGCTGGGCATAGCCGCTGGAGTGGGAGAGACGGGATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: WAQGHSQRQGPGYRC*AGHSRWSGRDGMRG
Trigger: GCCCCTCATCCCGTCTCTCCCACTCCAGCGGCTATGCCCAGCTCAACACCTATAGCCGGGGCCCTGCCTCTGACTATGGCCCTGAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS TCA 90 bp CCAGGGCCAGCCCGTCCTTGGTCCATTGCACAATTCCAGAGTAGTTaGGCAGCACACAGGGGAGCACGGCCCGCTGTCCAGCCACCACCG +
Preference number: 5 (lower is better)
Translates to: PGPARPWSIAQFQSS*AAHRGARPAVQPPP
Trigger: CGGTGGTGGCTGGACAGCGGGCCGTGCTCCCCTGTGTGCTGCTCAACTACTCTGGAATTGTGCAATGGACCAAGGACGGGCTGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 90 bp GCTCAGCCACTCCGATTCGAGGCACGATGGCCCGGCAGGTGTAGGTaGCAGCGTCTGCCTGAGTCACCGACTTCAGCAGCAGCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: AQPLRFEARWPGRCR*QRLPESPTSAAAGC
Trigger: GCAACCAGCTGCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCACCTACACCTGCCGGGCCATCGTGCCTCGAATCGGAGTGGCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp AGCACGGCCCGCTGTCCAGCCACCACCGTCTGGTCAGCTGGCTCCTaGCTGAAGCGGGTCTGGGTCCCTTGGGAGAAAGTATCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: STARCPATTVWSAGS*LKRVWVPWEKVSER
Trigger: TCTCTCCGATACTTTCTCCCAAGGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCGGGCCGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CAA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGGGCTGGGGCCCGGAGTaGGCGAGCGAGCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQGWGPE*ASEPEE
Trigger: CTCCTCTGGCTCGCTCGCCAACTCCGGGCCCCAGCC...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS GCA 90 bp GAGGCGTCGTCAGAGAGCTCAGCATCTGTGATCTCCAGGTTGTACTaGCCAGCGTCTGCGGAGCCCACAACCCGGTACCGTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: EASSESSASVISRLY*PASAEPTTRYRGQA
Trigger: AGCCTGGCCACGGTACCGGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCTGACGACGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 90 bp AGGTGCCAGCGTCTGCCTGAGTCACCGACTTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCTGGGCAGAGAGAGCAGCCTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RCQRLPESPTSAAAG*CYSGPGQREQPRVG
Trigger: CCCCACCCGAGGCTGCTCTCTCTGCCCAGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTCGGTGACTCAGGCAGACGCTGGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368172.1
CDS CCA 90 bp AGCGGGCAGGGCCAGGGGCACGGTAGTCAGCATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCATGGGCACGCACGTTGTAGTAGCCAT +
Preference number: 5 (lower is better)
Translates to: SGQGQGHGSQHRALP*KTGGLHGHARCSSH
Trigger: ATGGCTACTACAACGTGCGTGCCCATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATGCTGACTACCGTGCCCCTGGCCCTGCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACAGGCTGGGGCCCGGAGTaGGCGAGCGAGCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITGWGPE*ASEPEE
Trigger: CTCCTCTGGCTCGCTCGCCAACTCCGGGCCCCAGCC...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368173.7
CDS GCA 90 bp AGAGAGCTCAGCATCTGTGATCTCCAGGTTGTACTGCCCAGCGTCTaGGGAGCCCACAACCCGGTACCGTGGCCAGGCTTTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RELSICDLQVVLPSV*GAHNPVPWPGFEAL
Trigger: CAGGGCCTCAAAGCCTGGCCACGGTACCGGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCCTTCCTACAAGGGGTaGGCCAGGAATGTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRPSYKG*ARNVAP
Trigger: GGGGGCGACATTCCTGGCCAACCCCTTGTAGGAAGG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGGGAGAGCGTACCGCTaGAAGACAGGGTGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPGRAYR*KTGCSD
Trigger: ATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCCC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS TCA 90 bp GAAGCGGGTCTGGGTCCTTACCTTGGGAGAAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGCTCAGCATGCTGTCCGCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: EAGLGPYLGRKYRRE*GSRRGGSACCPPAV
Trigger: CACGGCGGGCGGACAGCATGCTGAGCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTTTCTCCCAAGGTAAGGACCCAGACCCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS TCA 90 bp TGGCCTGGCACTCGTAAGAGGCGTCGTCAGAGAGCTCAGCATCTGTaGTCTCCAGGTTGTACTGCCCAGCGTCTGCGGAGCCCACAACCC +
Preference number: 5 (lower is better)
Translates to: WPGTRKRRRQRAQHL*SPGCTAQRLRSPQP
Trigger: GGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCTGACGACGCCTCTTACGAGTGCCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 90 bp CCGAGTGCTGGGAGGTGTAGGAGAATCGAGTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCTCATATGGGGTCCGCTCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PSAGRCRRIEWLWRT*QWGHTPHMGSAPGQ
Trigger: CTGGCCTGGAGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp TATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCCCCTACACGTGAGTCTGCATGCGCT +
Preference number: 5 (lower is better)
Translates to: YQGTAVKAFSSAPQR*PSQALAPTRESACA
Trigger: AGCGCATGCAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTCACAGCTGTTCCCTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp GGGTTGGCTGTGGCCTGGCAGGTAAAGACAACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATGGACAGGGTCACTGTAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GLAVAWQVKTTRSPS*TVCGSMDRVTVGGW
Trigger: CCACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACCTGCCAGGCCACAGCCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp GCTGGGAGGTGTAGGAGAATCGAGTGGCTGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATGGGGTCCGCTCCAGGCCAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: AGRCRRIEWLWRTCQ*GHTPHMGSAPGQRV
Trigger: CACCCTCTGGCCTGGAGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTACCGTGGCCAGGCTTaGAGGCCCTGGCCCATGCCC +
Preference number: 5 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWYRGQA*RPWPMP
Trigger: GGGCATGGGCCAGGGCCTCAAAGCCTGGCCACGGTA...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTTGAGCACGGTGAGTTaGGCCCGCCGAGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQLSTVS*ARRERR
Trigger: CCTGCGCTCTCGGCGGGCCAAACTCACCGTGCTCAA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR CAA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGCTCAGGGTCACGTCTTaGCGACTGCCTTTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQLRVTS*RLPLRR
Trigger: GCGCCGCAAAGGCAGTCGCAAAGACGTGACCCTGAG...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGACTCAGGGTCACGTCTTaGCGACTGCCTTTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRLRVTS*RLPLRR
Trigger: GCGCCGCAAAGGCAGTCGCAAAGACGTGACCCTGAG...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTGTGGCTGTGGCGTACTaGCCAATGGGGTCATACGCC +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSVAVAY*PMGSYA
Trigger: GGCGTATGACCCCATTGGCAAGTACGCCACAGCCAC...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGTGGCTGTGGCGTACTaGCCAATGGGGTCATACGCC +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRVAVAY*PMGSYA
Trigger: GGCGTATGACCCCATTGGCAAGTACGCCACAGCCAC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CAGCCAGCTCTCCAGCCCTCACCATGCTTGCTACTGTTCCCAGTTCCTTGCCAGGCAGCAGGCTTCGCATaGAAGGCCCGGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: QPALQPSPCLLLFPVPCQAAGFA*KARHVR
Trigger: CCTCACATGCCGGGCCTTCAATGCGAAGCCTGCTGC...CTGGCAAGGAACTGGGAACAGTAGCAAGCATGGTGAGGGCTGGAGAGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCGAGCGCCTGTTCTCTTaGGTCAGAAAGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPERLFS*VRKWWL
Trigger: CAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTC...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCTGAGGCCAGGGTGCTaGGGGAGGAACTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGLRPGC*GRNWSS
Trigger: TGAACTCCAGTTCCTCCCCAAGCACCCTGGCCTCAG...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS TCA 90 bp CCTTCCAGGCCCATGCTATGCGGTCTGGGGGTGGTGTGCTCCCAATaGAACACTCCACCTTGCCACCGTCACCCCTCACAGCATACTGCA +
Preference number: 5 (lower is better)
Translates to: PSRPMLCGLGVVCSQ*NTPPCHRHPSQHTA
Trigger: TGCAGTATGCTGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCACCCCCAGACCGCATAGCATGGGCCTGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp GGGTTGGCTGTGGCCTGGCAGGTAAAGACAACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATGGACAGGGTCACTGTAGGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: GLAVAWQVKTTRSPS*TVCGSMDRVTVGGL
Trigger: CAACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACCTGCCAGGCCACAGCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS CCA 90 bp GGCCTGGCAGGTAAAGACAACACGCTCACCCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCACTGTAGGAGGGTTGAGCACGGTGAG +
Preference number: 5 (lower is better)
Translates to: GLAGKDNTLTLLHRL*LNGQGHCRRVEHGE
Trigger: CTCACCGTGCTCAACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACCTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS CCA 90 bp GGCCGTAGTCCGAGTGCTGGGAGGTGTAGGAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGTCATACGCCTCATATGGGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GRSPSAGRCRRIEWL*RTCQWGHTPHMGSA
Trigger: AGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGGACTACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp GGCCTGGCAGGTAAAGACAACACGCTCACCCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCACTGTAGGAGGGTGGTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: GLAGKDNTLTLLHRL*LNGQGHCRRVVHIQ
Trigger: CTGGATGTGCACCACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACCTGCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGCCCAAGATCTCGGGGTaGGCTGTGGCCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWPKISG*AVAWQV
Trigger: TACCTGCCAGGCCACAGCCAACCCCGAGATCTTGGG...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTCCCAAGATCTCGGGGTaGGCTGTGGCCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPPKISG*AVAWQV
Trigger: TACCTGCCAGGCCACAGCCAACCCCGAGATCTTGGG...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGACAGCTGGCTGGTaGTGTCAGTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQRTAGW*CQCQLG
Trigger: CCCCAGCTGGCACTGACACAACCAGCCAGCTGTCCT...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCGGGGTTAATAAGCAGTaGGCTCACGGTGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCGVNKQ*AHGGLP
Trigger: AGGGAGACCACCGTGAGCCAACTGCTTATTAACCCC...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTAGGGCGAGGAACATTTaGGGAACTGCACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSRARNI*GTAPEA
Trigger: GGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCCT...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCAGGGCAGAGACTACCTaGGTTGCTGATGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCRAETT*VADASL
Trigger: CAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCCT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGCTCCACCGGCTCCCCTaGCAAGCTGCTCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQLHRLP*QAAPSQ
Trigger: CTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGAG...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp ATCGCTGGCCGTAGTCCGAGTGCTGGGAGGTGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAATGGGGTCATACGCCTCATATGGGG +
Preference number: 5 (lower is better)
Translates to: IAGRSPSAGRCRRIE*LWRTCQWGHTPHMG
Trigger: CCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGGACTACGGCCAGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGTCACTGTAGGAGGGTaGAGCACGGTGAGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVVTVGG*STVSLA
Trigger: GGCCAAACTCACCGTGCTCAACCCTCCTACAGTGAC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR CAA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGATGAAACACTCCACCTaGCCACCGTCACCCCTCACA +
Preference number: 5 (lower is better)
Translates to: PEEGERHPGHECRQQRDWMKHST*PPSPLT
Trigger: TGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCAT...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCTCAGGGTCACGTCTTaGCGACTGCCTTTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWLRVTS*RLPLRR
Trigger: GCGCCGCAAAGGCAGTCGCAAAGACGTGACCCTGAG...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PEEGERHPGHECRQQRDWWLPLV*VHCCAA
Trigger: TGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCA...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGGGGTTAATAAGCAGTaGGCTCACGGTGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPGVNKQ*AHGGLP
Trigger: AGGGAGACCACCGTGAGCCAACTGCTTATTAACCCC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTTCGATGGAAGTCTCCTaGCCACTAGGGATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSSMEVS*PLGMAS
Trigger: CGAAGCCATCCCTAGTGGCAAGGAGACTTCCATCGA...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGGGGTACAGGTTCTCCTaGGAGCGCCTGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PEEGERHPGHECRQQRDWGYRFS*ERLFSL
Trigger: CAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCC...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGGGCGAGGAACATTTaGGGAACTGCACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRARNI*GTAPEA
Trigger: GGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GATATAGGGCGGGTCCTTCACGAGGGAAGTGACCGTGGCTCAGCCAAAATCACACCTTCCTACAAGGGGTaGGCCAGGAATGTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: DIGRVLHEGSDRGSAKITPSYKG*ARNVAP
Trigger: GGGGGCGACATTCCTGGCCAACCCCTTGTAGGAAGG...TGTGATTTTGGCTGAGCCACGGTCACTTCCCTCGTGAAGGACCCGCCCTATATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GGCATGCACAGAGCACCATCCTCGGGACGGGGTGTTTCTGGGAGACCTGCTCCCTGTATTCCAAAGCTGTaGTACCCCTTTCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GMHRAPSSGRGVSGRPAPCIPKL*YPFPST
Trigger: GGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA...GGGAGCAGGTCTCCCAGAAACACCCCGTCCCGAGGATGGTGCTCTGTGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACTGAGGCCAGGGTGCTaGGGGAGGAACTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: RRAQGPSILNKASGWGQQLRPGC*GRNWSS
Trigger: TGAACTCCAGTTCCTCCCCAAGCACCCTGGCCTCAG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp CGGGTTGCTGTGGAGACGCTGGCGGTGTCATCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGGTTCACTGTCTCCACCTTGATATCC +
Preference number: 5 (lower is better)
Translates to: RVAVETLAVSSSRSE*IVSGSRFTVSTLIS
Trigger: GGATATCAAGGTGGAGACAGTGAACCGAGAGCCACTTACGATGCATTCTGACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGTCTGGGTCCTTACCTaGGGAGAAAGTATCGGAGAG +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGVWVLT*GESIGE
Trigger: CTCTCCGATACTTTCTCCCAAGGTAAGGACCCAGAC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGCCAGCCCGTCCTaGGTCCATTGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQRASPS*VHCTIP
Trigger: TGGAATTGTGCAATGGACCAAGGACGGGCTGGCCCT...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTCTGTGATCTCCAGGTaGTACTGCCCAGCGTCTGCG +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQSVISR*YCPASA
Trigger: CGCAGACGCTGGGCAGTACAACCTGGAGATCACAGA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTGCCTCCATGACATTGTaGATGGTGAGCGTGGATAGC +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSASMTL*MVSVDS
Trigger: GCTATCCACGCTCACCATCAACAATGTCATGGAGGC...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGGCCTCCATGACATTGTaGATGGTGAGCGTGGATAGC +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRASMTL*MVSVDS
Trigger: GCTATCCACGCTCACCATCAACAATGTCATGGAGGC...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGGCCTCCATGACATTGTaGATGGTGAGCGTGGATAGC +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGASMTL*MVSVDS
Trigger: GCTATCCACGCTCACCATCAACAATGTCATGGAGGC...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTCGGCCTCCATGACATaGTTGATGGTGAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGSASMT*LMVSVD
Trigger: ATCCACGCTCACCATCAACAATGTCATGGAGGCCGA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCAGGACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCTCGGCCTCCATGACATaGTTGATGGTGAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: TRTLTYLAGPAWRRRKAGSASMT*LMVSVD
Trigger: ATCCACGCTCACCATCAACAATGTCATGGAGGCCGA...GCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGAGGACAGCTGGCTGGTaGTGTCAGTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLRTAGW*CQCQLG
Trigger: CCCCAGCTGGCACTGACACAACCAGCCAGCTGTCCT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTGCGGGTCTGGGTCCCTaGGGAGAAAGTATCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPAGLGP*GESIGE
Trigger: CTCTCCGATACTTTCTCCCAAGGGACCCAGACCCGC...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CAA 90 bp ACCTTGGTTGCTGATGCTTCCCTGTGCCTTCCAGGGTGCTTGTTTGACACCCAAGCAGCAGGCTTCGCATaGAAGGCCCGGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: TLVADASLCLPGCLFDTQAAGFA*KARHVR
Trigger: CCTCACATGCCGGGCCTTCAATGCGAAGCCTGCTGC...TTGGGTGTCAAACAAGCACCCTGGAAGGCACAGGGAAGCATCAGCAACCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTCGATGGAAGTCTCCTaGCCACTAGGGATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVSMEVS*PLGMAS
Trigger: CGAAGCCATCCCTAGTGGCAAGGAGACTTCCATCGA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTCCTTTCCACTGGGACTaGTATTTGGGTGGGGGAATC +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSPFHWD*YLGGGI
Trigger: GATTCCCCCACCCAAATACAAGTCCCAGTGGAAAGG...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCCCTTTCCACTGGGACTaGTATTTGGGTGGGGGAATC +
Preference number: 5 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPPFHWD*YLGGGI
Trigger: GATTCCCCCACCCAAATACAAGTCCCAGTGGAAAGG...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACAGAGACTACCTTGGTaGCTGATGCTTCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGQRLPW*LMLPCA
Trigger: GGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTG...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGCTCCACCGGCTCCCCTaGCAAGCTGCTCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLLHRLP*QAAPSQ
Trigger: CTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGAG...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCCTCTGTGGCTGGACTTaGAGGGATCCAGAATTTAGG +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCLCGWT*RDPEFR
Trigger: CCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAG...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGCCTGGGCCCCATATTaGAGTCCTTTTTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVAWAPY*SPFWSR
Trigger: CCTGGACCAAAAAGGACTCAAATATGGGGCCCAGGC...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368172.1
CDS CCA 90 bp GGAGACGCTGGCGGTGTCATCCTCCCGGTCAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTCCACCTTGATATCCAGCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GDAGGVILPVRMHRK*LSVHCLHLDIQLPQ
Trigger: CTGAGGAAGCTGGATATCAAGGTGGAGACAGTGAACCGAGAGCCACTTACGATGCATTCTGACCGGGAGGATGACACCGCCAGCGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTCTGTGATCTCCAGGTaGTACTGCCCAGCGTCTGCG +
Preference number: 5 (lower is better)
Translates to: ACDFCAAIISPGTGPEATSVISR*YCPASA
Trigger: CGCAGACGCTGGGCAGTACAACCTGGAGATCACAGA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CAA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCCCCAAGATCTCGGGGTaGGCTGTGGCCTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: VPPFPLMGDQRGGIERECPKISG*AVAWQV
Trigger: TACCTGCCAGGCCACAGCCAACCCCGAGATCTTGGG...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGAGCCAATGTCTGTGGTaGTGGGTTTGGGGTCAACTA +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGSQCLW*WVWGQL
Trigger: TAGTTGACCCCAAACCCACAACCACAGACATTGGCT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTTCAGCAGCAGCTGGTaGCTGTTACTCAGGACCATA +
Preference number: 5 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPFSSSW*LLLRTI
Trigger: TATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAA...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATGTGGCTGTGGCGTACTaGCCAATGGGGTCATACGCC +
Preference number: 5 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYVAVAY*PMGSYA
Trigger: GGCGTATGACCCCATTGGCAAGTACGCCACAGCCAC...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPWLPLV*VHCCAA
Trigger: TGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCA...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGACATGGAAGGTGTGTGTaGGATGTGCGTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGHGRCV*DVRAHG
Trigger: TCCATGTGCACGCACATCCAACACACACCTTCCATG...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAGGGTACAGGTTCTCCTaGGAGCGCCTGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RRAQGPSILNKASGWGQQGYRFS*ERLFSL
Trigger: CAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCC...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCTTCCAGGGTGCTTGTTaGACACCCAAGAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIFQGAC*TPKRLQ
Trigger: CTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAA...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCAGAGACTACCTTGGTaGCTGATGCTTCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIQRLPW*LMLPCA
Trigger: GGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCGCAGGCTTCACCTGTTaGGTGAGAAGAACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPAGFTC*VRRTSC
Trigger: ACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGC...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCTCCACCGGCTCCCCTaGCAAGCTGCTCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNLHRLP*QAAPSQ
Trigger: CTGAGAAGGAGCAGCTTGCAAGGGGAGCCGGTGGAG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCGGGAGAGCGTACCGCTaGAAGACAGGGTGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: ACDFCAAIISPGTGPEATGRAYR*KTGCSD
Trigger: ATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCCC...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp CACATCATCCTTAAACGACGAGTAGATGGCCTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGTGTCATCCTCCCGGTCAGAATGCAT +
Preference number: 5 (lower is better)
Translates to: HIILKRRVDGLHDPG*CGDAGGVILPVRMH
Trigger: ATGCATTCTGACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAGGCCATCTACTCGTCGTTTAAGGATGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp GTGAAGACACGCCCTATGTCCAGGTCCGTGGGGTTAATAAGCAGTTaGCTCACGGTGGTCTCCCTCTTCCCATCCTTCAGCAATTCCGTG +
Preference number: 5 (lower is better)
Translates to: VKTRPMSRSVGLISS*LTVVSLFPSFSNSV
Trigger: CACGGAATTGCTGAAGGATGGGAAGAGGGAGACCACCGTGAGCCAACTGCTTATTAACCCCACGGACCTGGACATAGGGCGTGTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAAGGGCCAGCCCGTCCTaGGTCCATTGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGRASPS*VHCTIP
Trigger: TGGAATTGTGCAATGGACCAAGGACGGGCTGGCCCT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGCCAATGTCTGTGGTaGTGGGTTTGGGGTCAACTA +
Preference number: 5 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGSQCLW*WVWGQL
Trigger: TAGTTGACCCCAAACCCACAACCACAGACATTGGCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGAGCCAATGTCTGTGGTaGTGGGTTTGGGGTCAACTA +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVSQCLW*WVWGQL
Trigger: TAGTTGACCCCAAACCCACAACCACAGACATTGGCT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAGGACAGCTGGCTGGTaGTGTCAGTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFRTAGW*CQCQLG
Trigger: CCCCAGCTGGCACTGACACAACCAGCCAGCTGTCCT...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATATGAGCACGGTGAGTTaGGCCCGCCGAGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNMSTVS*ARRERR
Trigger: CCTGCGCTCTCGGCGGGCCAAACTCACCGTGCTCAT...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS-3UTR CAA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAACACTGGGACTTGTATTaGGGTGGGGGAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: RRAQGPSILNKASGWGQQHWDLY*GGGIPT
Trigger: TGTAGGGATTCCCCCACCCAAATACAAGTCCCAGTG...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGCATGGAAGGTGTGTGTaGGATGTGCGTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGHGRCV*DVRAHG
Trigger: TCCATGTGCACGCACATCCAACACACACCTTCCATG...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTGAGCGCCTGTTCTCTTaGGTCAGAAAGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFERLFS*VRKWWL
Trigger: CAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTC...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTTTCCAGGGTGCTTGTTaGACACCCAAGAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPFQGAC*TPKRLQ
Trigger: CTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAA...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGCGCTCCAAACGGGTCTaGGCTTTAATGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRRSKRV*ALMWFS
Trigger: AGAAAACCACATTAAAGCCAAGACCCGTTTGGAGCG...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCATGGTGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTACTGTATTGGGATTTaGGCTGCTCTTTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AMVGGRRLVREGSNEQCPYCIGI*AALSPE
Trigger: CTCTGGGGAAAGAGCAGCCAAAATCCCAATACAGTA...GGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGCCCGTCCTTGGTCCATaGCACAATTCCAGAGTAGTT +
Preference number: 5 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQPVLGP*HNSRVV
Trigger: AACTACTCTGGAATTGTGCAATGGACCAAGGACGGG...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCCCGTCCTTGGTCCATaGCACAATTCCAGAGTAGTT +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIPVLGP*HNSRVV
Trigger: AACTACTCTGGAATTGTGCAATGGACCAAGGACGGG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGACTAAAGTGCTGACATaGGTGCTTCCCACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGTKVLT*VLPTLL
Trigger: CAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGT...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CCTGAGGAAGGAGAGAGGCACCCAGGGCACGAATGCAGACAACAGAGGGACTGGACTAAAGTGCTGACATaGGTGCTTCCCACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PEEGERHPGHECRQQRDWTKVLT*VLPTLL
Trigger: CAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGT...CCAGTCCCTCTGTTGTCTGCATTCGTGCCCTGGGTGCCTCTCTCCTTCCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGATGAAACACTCCACCTaGCCACCGTCACCCCTCACA +
Preference number: 5 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMMKHST*PPSPLT
Trigger: TGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCAT...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGAATGAAACACTCCACCTaGCCACCGTCACCCCTCACA +
Preference number: 5 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGMKHST*PPSPLT
Trigger: TGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCAT...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGATGAAACACTCCACCTaGCCACCGTCACCCCTCACA +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLMKHST*PPSPLT
Trigger: TGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCAT...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTGCCTCCATGACATTGTaGATGGTGAGCGTGGATAGC +
Preference number: 5 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPASMTL*MVSVDS
Trigger: GCTATCCACGCTCACCATCAACAATGTCATGGAGGC...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTATTCCAAAGCTGTTGTACCCCTTTCCCTCCACCGGCTCCCCTTGCAAGCTGTCGGCCTCCATGACATaGTTGATGGTGAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: CIPKLLYPFPSTGSPCKLSASMT*LMVSVD
Trigger: ATCCACGCTCACCATCAACAATGTCATGGAGGCCGA...CAGCTTGCAAGGGGAGCCGGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCTCAGGGTCACGTCTTaGCGACTGCCTTTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNLRVTS*RLPLRR
Trigger: GCGCCGCAAAGGCAGTCGCAAAGACGTGACCCTGAG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATAGGACAGCTGGCTGGTaGTGTCAGTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNRTAGW*CQCQLG
Trigger: CCCCAGCTGGCACTGACACAACCAGCCAGCTGTCCT...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCAGGGCGAGGAACATTTaGGGAACTGCACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VPPFPLMGDQRGGIERECRARNI*GTAPEA
Trigger: GGCCTCTGGTGCAGTTCCCAAAATGTTCCTCGCCCT...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGGAGGCTCCAGTTACCTaGTTAAGGAGTAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGEAPVT*LRSRGQ
Trigger: CTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTC...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCGAGGCTCCAGTTACCTaGTTAAGGAGTAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIEAPVT*LRSRGQ
Trigger: CTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTC...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGATTCCAGGGTGCTTGTTaGACACCCAAGAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRFQGAC*TPKRLQ
Trigger: CTGGAGCCTCTTGGGTGTCAAACAAGCACCCTGGAA...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTGCCTTCCAGGGTGCTaGTTTGACACCCAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYCLPGC*FDTQEA
Trigger: AGCCTCTTGGGTGTCAAACAAGCACCCTGGAAGGCA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGCAGGCTTCACCTGTTaGGTGAGAAGAACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQAGFTC*VRRTSC
Trigger: ACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGC...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGTGTATTCCAAAGCTGTaGTACCCCTTTCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: RPKPAHPWVPPFPLMGDQCIPKL*YPFPST
Trigger: GGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA...CTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCCTCTGTGGCTGGACTTaGAGGGATCCAGAATTTAGG +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEILCGWT*RDPEFR
Trigger: CCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAG...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGGGGAGAGCGTACCGCTaGAAGACAGGGTGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLGRAYR*KTGCSD
Trigger: ATCTGAGCACCCTGTCTTCAAGCGGTACGCTCTCCC...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCA +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCASLIL*GNSQHA
Trigger: TGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGC...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTTTCAATTACATCCCTaGGCCTGTGCACTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRFQLHP*ACALQC
Trigger: ACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTTTCAATTACATCCCTaGGCCTGTGCACTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGFQLHP*ACALQC
Trigger: ACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTTAATAAGGGCAGGTTaGTACCAGAACTGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: SHPLPYFMSLGQSLPIPGLIRAG*YQNCPV
Trigger: TACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAA...CCCAGGGATGGGCAGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTTAATAAGGGCAGGTTaGTACCAGAACTGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRLIRAG*YQNCPV
Trigger: TACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GACCCTGACTTATCTGGCTGGCCCAGCATGGAGGAGAAGGAAAGCGGGCCGTGCTGGATCCATTTATTTTaGGGGTCTGGGTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: DPDLSGWPSMEEKESGPCWIHLF*GSGWRK
Trigger: TTTTCTCCACCCAGACCCCAAAAATAAATGGATCCA...GCACGGCCCGCTTTCCTTCTCCTCCATGCTGGGCCAGCCAGATAAGTCAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGACTAAAGTGCTGACATaGGTGCTTCCCACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVTKVLT*VLPTLL
Trigger: CAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGT...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTAGCCAATGTCTGTGGTaGTGGGTTTGGGGTCAACTA +
Preference number: 5 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFSQCLW*WVWGQL
Trigger: TAGTTGACCCCAAACCCACAACCACAGACATTGGCT...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCTTCAGCAGCAGCTGGTaGCTGTTACTCAGGACCATA +
Preference number: 5 (lower is better)
Translates to: ACDFCAAIISPGTGPEATFSSSW*LLLRTI
Trigger: TATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAA...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCACTGGGACTTGTATTaGGGTGGGGGAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYHWDLY*GGGIPT
Trigger: TGTAGGGATTCCCCCACCCAAATACAAGTCCCAGTG...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGCCTTTCCACTGGGACTaGTATTTGGGTGGGGGAATC +
Preference number: 5 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMPFHWD*YLGGGI
Trigger: GATTCCCCCACCCAAATACAAGTCCCAGTGGAAAGG...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCACCTTTGCAAACCCATCAGAAATGAGTGGGGAGCAGCACAGATGACCCGACATGGAAGGTGTGTGTaGGATGTGCGTGCACATGGA +
Preference number: 5 (lower is better)
Translates to: RHLCKPIRNEWGAAQMTRHGRCV*DVRAHG
Trigger: TCCATGTGCACGCACATCCAACACACACCTTCCATG...TCGGGTCATCTGTGCTGCTCCCCACTCATTTCTGATGGGTTTGCAAAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CAGCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACGAGCGCCTGTTCTCTTaGGTCAGAAAGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QQSSVIKDAFHSPEKLFHERLFS*VRKWWL
Trigger: CAGCCACCACTTTCTGACCAAAGAGAACAGGCGCTC...GTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCAGAGACTACCTTGGTaGCTGATGCTTCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNQRLPW*LMLPCA
Trigger: GGCACAGGGAAGCATCAGCAACCAAGGTAGTCTCTG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTCTGACCTTTAGTCCCTaGCTCTTTCCACTAAAACAA +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSLTFSP*LFPLKQ
Trigger: TTGTTTTAGTGGAAAGAGCAAGGGACTAAAGGTCAG...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAAGGGTGTATTTTGTGTaGCTGTTTGGGATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: VPRPKPAHPWVPPFPLMGRVYFV*LFGIKG
Trigger: CCCCTTTATCCCAAACAGCAACACAAAATACACCCT...TCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTCGCTCCAAACGGGTCTaGGCTTTAATGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPRSKRV*ALMWFS
Trigger: AGAAAACCACATTAAAGCCAAGACCCGTTTGGAGCG...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGTTTCAATTACATCCCTaGGCCTGTGCACTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVFQLHP*ACALQC
Trigger: ACACTGAAGTGCACAGGCCAAGGGATGTAATTGAAA...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTACTGTATTGGGATTTaGGCTGCTCTTTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQYCIGI*AALSPE
Trigger: CTCTGGGGAAAGAGCAGCCAAAATCCCAATACAGTA...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS GCA 90 bp TATTTCTCCTCTCAAGCTGTATCTCTCTGGGTCTCTTTCGGTCTTTaGTCCCCCTTTCTCTCCCCTTCTCTTCCTTCCCTCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: YFSSQAVSLWVSFGL*SPFLSPSLPSLSPS
Trigger: GGAGGGAGAGAGGGAAGGAAGAGAAGGGGAGAGAAAGGGGGAGCAAAGACCGAAAGAGACCCAGAGAGATACAGCTTGAGAGGAGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGCTGGGGCAGGGGTACAGGTTCTCCTTGGAGCGCCTGTTCTCTTTGGTCAGAAGGAATAATCCACATTaGTCTCATAGCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: RLGQGYRFSLERLFSLVRRNNPH*SHSDSR
Trigger: ACGAGAGTCGCTATGAGACAAATGTGGATTATTCCT...TCTGACCAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCCCTGCCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTACTAAAGTGCTGACATaGGTGCTTCCCACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPTKVLT*VLPTLL
Trigger: CAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGATATTTGAGTCCTTTTaGGTCCAGGTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGIFESF*VQVRVR
Trigger: CCTCACTCTCACCTGGACCAAAAAGGACTCAAATAT...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GAGGCTTGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGATATTTGAGTCCTTTTaGGTCCAGGTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: EACVAPSSVGSLLCSTQQIFESF*VQVRVR
Trigger: CCTCACTCTCACCTGGACCAAAAAGGACTCAAATAT...CTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTTCAGCAGCAGCTGGTaGCTGTTACTCAGGACCATA +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLFSSSW*LLLRTI
Trigger: TATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CAA 90 bp CCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTAAAAGTGGCTGTGGCGTACTaGCCAATGGGGTCATACGCC +
Preference number: 5 (lower is better)
Translates to: PISTYGRSEGWDRKGMLKVAVAY*PMGSYA
Trigger: GGCGTATGACCCCATTGGCAAGTACGCCACAGCCAC...TTTTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSWLPLV*VHCCAA
Trigger: TGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTGGCTCCCTCTAGTGTaGGTTCACTGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFWLPLV*VHCCAA
Trigger: TGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGATGGATTCAAAGTGCTaGGAGACTGAAAGAGTAATG +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRMDSKC*ETERVM
Trigger: CATTACTCTTTCAGTCTCCAAGCACTTTGAATCCAT...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTTGCCTTCCAGGGTGCTaGTTTGACACCCAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSCLPGC*FDTQEA
Trigger: AGCCTCTTGGGTGTCAAACAAGCACCCTGGAAGGCA...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGAGGGCAGAGACTACCTaGGTTGCTGATGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVRAETT*VADASL
Trigger: CAGGGAAGCATCAGCAACCAAGGTAGTCTCTGCCCT...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCTGACCTTTAGTCCCTaGCTCTTTCCACTAAAACAA +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVLTFSP*LFPLKQ
Trigger: TTGTTTTAGTGGAAAGAGCAAGGGACTAAAGGTCAG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTAGGGTGTATTTTGTGTaGCTGTTTGGGATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPRVYFV*LFGIKG
Trigger: CCCCTTTATCCCAAACAGCAACACAAAATACACCCT...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGCACTTACTAGGCTTTTaGCTTCATGCAAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLPIPGYPHFHLWEIRGVHLLGF*LHANSV
Trigger: CACAGAGTTTGCATGAAGCAAAAAGCCTAGTAAGTG...CACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCGCTCCAAACGGGTCTaGGCTTTAATGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ACDFCAAIISPGTGPEATRSKRV*ALMWFS
Trigger: AGAAAACCACATTAAAGCCAAGACCCGTTTGGAGCG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATCAGGGATCAGACAGCACTAACTaGGGGAAGCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: EEGWSEKGAMSNAPEYQGSDSTN*GKPGFL
Trigger: CAGAAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGA...TCCCTGATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGTGTGTTGGATGTGCGTGCACATGGAGGAGGAGAAATGGCCTGTGTAATGCCTCAGACAGCACTAACTaGGGGAAGCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: VCVGCACTWRRRNGLCNASDSTN*GKPGFL
Trigger: CAGAAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGA...GGCATTACACAGGCCATTTCTCCTCCTCCATGTGCACGCACATCCAACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GGCTGTTCTGTAGACAAGAGCGAACAGTACCCTGTTCGCTCCCTTCTGCAGTACTCAGACAGCACTAACTaGGGGAAGCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: GCSVDKSEQYPVRSLLQYSDSTN*GKPGFL
Trigger: CAGAAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGA...GTACTGCAGAAGGGAGCGAACAGGGTACTGTTCGCTCTTGTCTACAGAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGCAGGTCAGAAGAGACACATCCTCCCGAAGAAGAGGGAAGGGCAGGCCCAGGTGGAGTTTTACTGTATaGGGATTTTGGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: VQVRRDTSSRRRGKGRPRWSFTV*GFWLLF
Trigger: AAAGAGCAGCCAAAATCCCAATACAGTAAAACTCCA...CCTGGGCCTGCCCTTCCCTCTTCTTCGGGAGGATGTGTCTCTTCTGACCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCAGGAATAATCCACATTaGTCTCATAGCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIRNNPH*SHSDSR
Trigger: ACGAGAGTCGCTATGAGACAAATGTGGATTATTCCT...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ATGTCCCTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGAGGAATAATCCACATTaGTCTCATAGCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: MSLGQSLPIPGYPHFHLWRNNPH*SHSDSR
Trigger: ACGAGAGTCGCTATGAGACAAATGTGGATTATTCCT...CCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ACCACTCCCCAAACCAGCTCAAGAGTTAAAGCCAGGAAGTGGGGCAGACTGGGGAGGAATAATCCACATTaGTCTCATAGCGACTCTCGT +
Preference number: 5 (lower is better)
Translates to: TTPQTSSRVKARKWGRLGRNNPH*SHSDSR
Trigger: ACGAGAGTCGCTATGAGACAAATGTGGATTATTCCT...CCCCAGTCTGCCCCACTTCCTGGCTTTAACTCTTGAGCTGGTTTGGGGAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTCACTGGGACTTGTATTaGGGTGGGGGAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFHWDLY*GGGIPT
Trigger: TGTAGGGATTCCCCCACCCAAATACAAGTCCCAGTG...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCGAGGCTCCAGTTACCTaGTTAAGGAGTAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: VPPFPLMGDQRGGIERECEAPVT*LRSRGQ
Trigger: CTGTCCTCTACTCCTTAACAAGGTAACTGGAGCCTC...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTGGAGGAAGGCTCCTCCCATTTTCCCCTACAGAAGGAGTGCCTGAAACCTAGGGTGTATTTTGTGTaGCTGTTTGGGATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RVEEGSSHFPLQKECLKPRVYFV*LFGIKG
Trigger: CCCCTTTATCCCAAACAGCAACACAAAATACACCCT...AGGTTTCAGGCACTCCTTCTGTAGGGGAAAATGGGAGGAGCCTTCCTCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATCTCTGTGGCTGGACTTaGAGGGATCCAGAATTTAGG +
Preference number: 5 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNLCGWT*RDPEFR
Trigger: CCTAAATTCTGGATCCCTCAAAGTCCAGCCACAGAG...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTTGCAAGCTGCTCCTTCTCAGGCAGGGGCAGCTGTGCTTACTCCCCGACCTCTCTGTTGCTAACAAGATaGTGTGGAGTTTTACTGTAT +
Preference number: 5 (lower is better)
Translates to: LASCSFSGRGSCAYSPTSLLLTR*CGVLLY
Trigger: ATACAGTAAAACTCCACACAATCTTGTTAGCAACAG...AGAGGTCGGGGAGTAAGCACAGCTGCCCCTGCCTGAGAAGGAGCAGCTTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTAGGCCAAAGCCTGCCCATCCCTGGGTACCCCCATTTCCACTTATGGGAGATCTTTTCTGGGTCACTGTaGCTAACAAGATTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LGQSLPIPGYPHFHLWEIFSGSL*LTRLCG
Trigger: TCCACACAATCTTGTTAGCAACAGTGACCCAGAAAA...GATCTCCCATAAGTGGAAATGGGGGTACCCAGGGATGGGCAGGCTTTGGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGTGGCTGAGAAGCAGTCACATGGAAGGTGTGTGTTGGATGTGCGTGCACATGATATTTGAGTCCTTTTaGGTCCAGGTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: WWLRSSHMEGVCWMCVHMIFESF*VQVRVR
Trigger: CCTCACTCTCACCTGGACCAAAAAGGACTCAAATAT...CATGTGCACGCACATCCAACACACACCTTCCATGTGACTGCTTCTCAGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGAAGAGCTCAGGGCCCATCGATACTCAACAAGGCCAGTGGTTGGGGCCAGCAAATGGATTCAAAGTGCTaGGAGACTGAAAGAGTAATG +
Preference number: 5 (lower is better)
Translates to: RRAQGPSILNKASGWGQQMDSKC*ETERVM
Trigger: CATTACTCTTTCAGTCTCCAAGCACTTTGAATCCAT...TTGCTGGCCCCAACCACTGGCCTTGTTGAGTATCGATGGGCCCTGAGCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCAAAGCTCTGTGATCAAGGACGCCTTCCACTCCCCAGAAAAGCTATTCCACTGTCGGTCATCCAAAGCTaGACACTCAAGGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: AKLCDQGRLPLPRKAIPLSVIQS*TLKALK
Trigger: TTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGA...CAGTGGAATAGCTTTTCTGGGGAGTGGAAGGCGTCCTTGATCACAGAGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCCTTCCTACAAGGGGTaGGCCAGGAATGTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: IVIINKGRFVPELPSMACPSYKG*ARNVAP
Trigger: GGGGGCGACATTCCTGGCCAACCCCTTGTAGGAAGG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCAATGAGCAATGCCCCTGAATATCAGGGAACAGCTGTGAAAGCCTTCTCCTCTGCAGGCTTCACCTGTTaGGTGAGAAGAACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: AMSNAPEYQGTAVKAFSSAGFTC*VRRTSC
Trigger: ACAGCTTGTTCTTCTCACCAAACAGGTGAAGCCTGC...AGAGGAGAAGGCTTTCACAGCTGTTCCCTGATATTCAGGGGCATTGCTCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGTTAATAAGGGCAGGTTaGTACCAGAACTGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLLIRAG*YQNCPV
Trigger: TACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAA...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGTCTGTGCCACAGCCACCCACTCCCATACTTCATGTCCCTAGGCCAAAGCCTTGGAGTTTTACTGTATaGGGATTTTGGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LSVPQPPTPILHVPRPKPWSFTV*GFWLLF
Trigger: AAAGAGCAGCCAAAATCCCAATACAGTAAAACTCCA...AGGCTTTGGCCTAGGGACATGAAGTATGGGAGTGGGTGGCTGTGGCACAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CAAGCAGTGGCCTGGCTCAGGTCAGACAGCACTAACTTGGGGAAGCCAGGATTTTTTTCTGGGTCACTGTaGCTAACAAGATTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: QAVAWLRSDSTNLGKPGFFSGSL*LTRLCG
Trigger: TCCACACAATCTTGTTAGCAACAGTGACCCAGAAAA...AAATCCTGGCTTCCCCAAGTTAGTGCTGTCTGACCTGAGCCAGGCCACTGCTTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGTGGATCCATTTATTTTaGGGGTCTGGGTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: VWLPLVLVHCCAAHSSIWWIHLF*GSGWRK
Trigger: TTTTCTCCACCCAGACCCCAAAAATAAATGGATCCA...CCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AACCTTCCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTTCGGTCATCCAAAGCTaGACACTCAAGGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: NLPHSKEQGSSLQTGLGFSVIQS*TLKALK
Trigger: TTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGA...AAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATGGGTACAGGTTCTCCTaGGAGCGCCTGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNGYRFS*ERLFSL
Trigger: CAAAGAGAACAGGCGCTCCAAGGAGAACCTGTACCC...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGGTCAATAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: LPLVLVHCCAAHSSIWVNKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...ATTGACCCAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGCCTTCCAGGGTGCTaGTTTGACACCCAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNCLPGC*FDTQEA
Trigger: AGCCTCTTGGGTGTCAAACAAGCACCCTGGAAGGCA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCTGAGGCCAGGGTGCTaGGGGAGGAACTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IVIINKGRFVPELPSMACLRPGC*GRNWSS
Trigger: TGAACTCCAGTTCCTCCCCAAGCACCCTGGCCTCAG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGTGTGGCTCCCTCTAGTGTTGGTTCACTGCTGTGCAGCACACAGCAGTATCTGGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCA +
Preference number: 5 (lower is better)
Translates to: CVAPSSVGSLLCSTQQYLASLIL*GNSQHA
Trigger: TGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGC...CAGATACTGCTGTGTGCTGCACAGCAGTGAACCAACACTAGAGGGAGCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS TCA 90 bp TGGTGCTTCCCACTTTGTTGTGAACCTCACAAGACACAGGCTCCGTaGAAAAGGAATAATCCACATTTGTCTCATAGCGACTCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: WCFPLCCEPHKTQAP*KRNNPHLSHSDSRG
Trigger: CCCACGAGAGTCGCTATGAGACAAATGTGGATTATTCCTTTTTCACGGAGCCTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp TGGGAGGAAGAAGGCTGGTCCGAGAAGGGAGCAATGAGCAATGCCCCTGAATATATGGATTCAAAGTGCTaGGAGACTGAAAGAGTAATG +
Preference number: 5 (lower is better)
Translates to: WEEEGWSEKGAMSNAPEYMDSKC*ETERVM
Trigger: CATTACTCTTTCAGTCTCCAAGCACTTTGAATCCAT...ATATTCAGGGGCATTGCTCATTGCTCCCTTCTCGGACCAGCCTTCTTCCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CCACACAGCAAAGAACAAGGCAGTTCGCTCCAAACGGGTCTTGGCTTTAATGTGAAGAACCTGAATTTCTaGACAGACCTTCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: PHSKEQGSSLQTGLGFNVKNLNF*TDLPTE
Trigger: CTCAGTGGGAAGGTCTGTCAAGAAATTCAGGTTCTT...CACATTAAAGCCAAGACCCGTTTGGAGCGAACTGCCTTGTTCTTTGCTGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCCACTTACTAGGCTTTTaGCTTCATGCAAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: VPPFPLMGDQRGGIERECHLLGF*LHANSV
Trigger: CACAGAGTTTGCATGAAGCAAAAAGCCTAGTAAGTG...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GCCTGTGACTTCTGCGCAGCAATTATTTCTCCAGGGACAGGGCCTGAAGCTACCCTGTTGCTAACAAGATaGTGTGGAGTTTTACTGTAT +
Preference number: 5 (lower is better)
Translates to: ACDFCAAIISPGTGPEATLLLTR*CGVLLY
Trigger: ATACAGTAAAACTCCACACAATCTTGTTAGCAACAG...GGTAGCTTCAGGCCCTGTCCCTGGAGAAATAATTGCTGCGCAGAAGTCACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp GTACCCCCATTTCCACTTATGGGAGATCAGAGGGGTGGGATAGAAAGGGAATGCTTTTCTGGGTCACTGTaGCTAACAAGATTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: VPPFPLMGDQRGGIERECFSGSL*LTRLCG
Trigger: TCCACACAATCTTGTTAGCAACAGTGACCCAGAAAA...GCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAAGTGGAAATGGGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS TCA 90 bp GGTCAACTACAATCCGGGGAGCAAAGTGGACATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTTTGTTGTGAACCTCACAAGACACAG +
Preference number: 5 (lower is better)
Translates to: GQLQSGEQSGHLLKC*HWCFPLCCEPHKTQ
Trigger: CTGTGTCTTGTGAGGTTCACAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGATTGTAGTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 90 bp CCGATTCTCTTTATCTCTCTTTCCTCCCAGACCTTTTTCTCCTCCTaGTCGCCCTCCCCCTTTAATTATTTCTCCTCTCAAGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: PILFISLSSQTFFSS*SPSPFNYFSSQAVS
Trigger: AGATACAGCTTGAGAGGAGAAATAATTAAAGGGGGAGGGCGACCAGGAGGAGAAAAAGGTCTGGGAGGAAAGAGAGATAAAGAGAATCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATATATTTGAGTCCTTTTaGGTCCAGGTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNIFESF*VQVRVR
Trigger: CCTCACTCTCACCTGGACCAAAAAGGACTCAAATAT...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGTATTCCAAAGCTGTaGTACCCCTTTCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNCIPKL*YPFPST
Trigger: GGTGGAGGGAAAGGGGTACAACAGCTTTGGAATACA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATGCTTCACTAATCCTTTaGGGCAATTCTCAACATGCA +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNASLIL*GNSQHA
Trigger: TGCATGTTGAGAATTGCCCAAAAGGATTAGTGAAGC...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATCACTTACTAGGCTTTTaGCTTCATGCAAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNHLLGF*LHANSV
Trigger: CACAGAGTTTGCATGAAGCAAAAAGCCTAGTAAGTG...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp AGGGTCGGTCATCCAAAGCTTGACACTCAAGGCACTGAAAGTGGAAGAAGGAATCTGTTGCTAACAAGATaGTGTGGAGTTTTACTGTAT +
Preference number: 5 (lower is better)
Translates to: RVGHPKLDTQGTESGRRNLLLTR*CGVLLY
Trigger: ATACAGTAAAACTCCACACAATCTTGTTAGCAACAG...ATTCCTTCTTCCACTTTCAGTGCCTTGAGTGTCAAGCTTTGGATGACCGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGGATCCATTTATTTTaGGGGTCTGGGTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNWIHLF*GSGWRK
Trigger: TTTTCTCCACCCAGACCCCAAAAATAAATGGATCCA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp CTGGGTGGAGAAAATTCAACAGGAGCTAGAAATGGAGGTTGCAATGCCAAGAATTGGAGTTTTACTGTATaGGGATTTTGGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LGGENSTGARNGGCNAKNWSFTV*GFWLLF
Trigger: AAAGAGCAGCCAAAATCCCAATACAGTAAAACTCCA...ATTCTTGGCATTGCAACCTCCATTTCTAGCTCCTGTTGAATTTTCTCCACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS-3UTR CAA 90 bp ATTGTTATTATTAATAAGGGCAGGTTTGTACCAGAACTGCCCAGTATGGCCTGTCTGACCTTTAGTCCCTaGCTCTTTCCACTAAAACAA +
Preference number: 5 (lower is better)
Translates to: IVIINKGRFVPELPSMACLTFSP*LFPLKQ
Trigger: TTGTTTTAGTGGAAAGAGCAAGGGACTAAAGGTCAG...ACAGGCCATACTGGGCAGTTCTGGTACAAACCTGCCCTTATTAATAATAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp AGCATGCTGTCCGCCCGCCGTGCGCCCGCCCGCGGCTaGGGCCCGGAGTTGGCGAGCGAGCCAGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: SMLSARRAPARG*GPELASEPEER
Trigger: CCGCTCCTCTGGCTCGCTCGCCAACTCCGGGCCCCAGCCGCGGGCGGGCGCACGGCGGGCGGACAGCATGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS CCA 72 bp CAGGGGAGCACGGCCCGCTGTCCAGCCACCACCGTCTaGTCAGCTGGCTCCTGGCTGAAGCGGGTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: QGSTARCPATTV*SAGSWLKRVWV
Trigger: GACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCGGGCCGTGCTCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS CAA 72 bp GACAGGGTCACTGTAGGAGGGTTGAGCACGGTGAGTTaGGCCCGCCGAGAGCGCAGGGCGGCCTCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: DRVTVGGLSTVS*ARRERRAASVA
Trigger: GGCCACGGAGGCCGCCCTGCGCTCTCGGCGGGCCAAACTCACCGTGCTCAACCCTCCTACAGTGACCCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS GCA 72 bp CCCAGCCAGGCTCTGGCCCCTACACGTGAGTCTGCATaGGCTGCTGGAATCGCTGGCCGTAGTCCGAGTGCT +
Preference number: 6 (lower is better)
Translates to: PSQALAPTRESA*AAGIAGRSPSA
Trigger: AGCACTCGGACTACGGCCAGCGATTCCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGAGCCTGGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp TGTGGCGTACTTGCCAATGGGGTCATACGCCTCATATaGGGTCCGCTCCAGGCCAGAGGGTGGGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: CGVLANGVIRLI*GPLQARGWGLG
Trigger: CCCCAGGCCCCACCCTCTGGCCTGGAGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp TTCAGCAATTCCGTGCTGGCCACAGCGCCCTCCTGCTaGGTCCCGTCCCGGAACCAGATGATGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: FSNSVLATAPSC*VPSRNQMMVAA
Trigger: TGCTGCCACCATCATCTGGTTCCGGGACGGGACGCAGCAGGAGGGCGCTGTGGCCAGCACGGAATTGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS GCA 72 bp TCCTTCAGCAATTCCGTGCTGGCCACAGCGCCCTCCTaGTGCGTCCCGTCCCGGAACCAGATGATGGTGGCA +
Preference number: 6 (lower is better)
Translates to: SFSNSVLATAPS*CVPSRNQMMVA
Trigger: TGCCACCATCATCTGGTTCCGGGACGGGACGCAGCAGGAGGGCGCTGTGGCCAGCACGGAATTGCTGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS CCA 72 bp CGCTGTCCAGCCACCACCGTCTGGTCAGCTGGCTCCTaGCTGAAGCGGGTCTGGGTCCTTACCTTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: RCPATTVWSAGS*LKRVWVLTLGE
Trigger: TTCTCCCAAGGTAAGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS CCA 72 bp GGCCAGGGGCACGGTAGTCAGCATAGAGCACTGCCCTaGAAGACGGGCGGTCTTCATGGGCACGCACGTTGT +
Preference number: 6 (lower is better)
Translates to: GQGHGSQHRALP*KTGGLHGHARC
Trigger: ACAACGTGCGTGCCCATGAAGACCGCCCGTCTTCCAGGGCAGTGCTCTATGCTGACTACCGTGCCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp CGCTGTCCAGCCACCACCGTCTGGTCAGCTGGCTCCTaGCTGAAGCGGGTCTGGGTCCCTTGGGAGAAAGTA +
Preference number: 6 (lower is better)
Translates to: RCPATTVWSAGS*LKRVWVPWEKV
Trigger: TACTTTCTCCCAAGGGACCCAGACCCGCTTCAGCCAGGAGCCAGCTGACCAGACGGTGGTGGCTGGACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS TCA 72 bp TGCCCACAGGTAACACCTCTCGCTCTTCCAGCTGGATaGTGGCTGTGCCTGGCCCGAAGCTGTTCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: CPQVTPLALPAG*WLCLARSCSRR
Trigger: CCGCCTGGAACAGCTTCGGGCCAGGCACAGCCATCATCCAGCTGGAAGAGCGAGAGGTGTTACCTGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp ACAGCTGTGAAAGCCTTCTCCTCTGCCCCGCAGAGATaGCCCAGCCAGGCTCTGGCCCCTACACGTGAGTCT +
Preference number: 6 (lower is better)
Translates to: TAVKAFSSAPQR*PSQALAPTRES
Trigger: AGACTCACGTGTAGGGGCCAGAGCCTGGCTGGGGCATCTCTGCGGGGCAGAGGAGAAGGCTTTCACAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CAA 72 bp GCGTCGTCAGAGAGCTCAGCATCTGTGATCTCCAGGTaGTACTGCCCAGCGTCTGCGGAGCCCACAACCCGG +
Preference number: 6 (lower is better)
Translates to: ASSESSASVISR*YCPASAEPTTR
Trigger: CCGGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCTGACGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS TCA 72 bp GCCCGTCCTTGGTCCATTGCACAATTCCAGAGTAGTTaGGCAGCACACAGGGGAGCACGGCCCGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: ARPWSIAQFQSS*AAHRGARPAVQ
Trigger: CTGGACAGCGGGCCGTGCTCCCCTGTGTGCTGCTCAACTACTCTGGAATTGTGCAATGGACCAAGGACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS TCA 72 bp CCCATGCTATGCGGTCTGGGGGTGGTGTGCTCCCAATaGAACACTCCACCTTGCCACCGTCACCCCTCACAG +
Preference number: 6 (lower is better)
Translates to: PMLCGLGVVCSQ*NTPPCHRHPSQ
Trigger: CTGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCACCCCCAGACCGCATAGCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp AGCATCTGTGATCTCCAGGTTGTACTGCCCAGCGTCTaGGGAGCCCACAACCCGGTACCGTGGCCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: SICDLQVVLPSV*GAHNPVPWPGF
Trigger: AAAGCCTGGCCACGGTACCGGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 72 bp CTGGGGGTAGCCCAGTCGGTAGGTGGGGTACCCAGCTaGCCCAGGGAAGGGATGGGAGTTGAACTTCTCATA +
Preference number: 6 (lower is better)
Translates to: LGVAQSVGGVPS*PREGMGVELLI
Trigger: TATGAGAAGTTCAACTCCCATCCCTTCCCTGGGGCAGCTGGGTACCCCACCTACCGACTGGGCTACCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CAA 90 bp GCTATGCGGTCTGGGGGTGGTGTGCTCCCAATGAAACACTCCACCTaGCCACCGTCACCCCTCACAGCATACTGCACTGCCTCACTGGAG +
Preference number: 6 (lower is better)
Translates to: AMRSGGGVLPMKHST*PPSPLTAYCTASLE
Trigger: CTCCAGTGAGGCAGTGCAGTATGCTGTGAGGGGTGACGGTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCACCCCCAGACCGCATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS TCA 72 bp GGGTCTGGGTCCCTTGGGAGAAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGCTCAGCATGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: GSGSLGRKYRRE*GSRRGGSACCP
Trigger: CGGACAGCATGCTGAGCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTTTCTCCCAAGGGACCCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359209.11
CDS GCA 72 bp TCAGAGAGCTCAGCATCTGTGATCTCCAGGTTGTACTaGCCAGCGTCTGCGGAGCCCACAACCCGGTACCGT +
Preference number: 6 (lower is better)
Translates to: SESSASVISRLY*PASAEPTTRYR
Trigger: ACGGTACCGGGTTGTGGGCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 72 bp GTGGAGACGCTGGCGGTGTCATCCTCCCGGTCAGAATaGATCGTAAGTGGCTCTCGGTTCACTGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: VETLAVSSSRSE*IVSGSRFTVST
Trigger: GGTGGAGACAGTGAACCGAGAGCCACTTACGATGCATTCTGACCGGGAGGATGACACCGCCAGCGTCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp CTTAAACGACGAGTAGATGGCCTTCATGACCCGGGTTaGTGTGGAGACGCTGGCGGTGTCATCCTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: LKRRVDGLHDPG*CGDAGGVILPV
Trigger: GACCGGGAGGATGACACCGCCAGCGTCTCCACAGCAACCCGGGTCATGAAGGCCATCTACTCGTCGTTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp CGTCTGCCTGAGTCACCGACTTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCTGGGCAGAGAGAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: RLPESPTSAAAG*CYSGPGQREQP
Trigger: AGGCTGCTCTCTCTGCCCAGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTCGGTGACTCAGGCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368172.1
CDS CCA 72 bp GTTCTCCTTCCAGGCCCATGCTATGCGGTCTGGGGGTaGTGTGCTCCCAATGAAACACTCCACCTTGCCACC +
Preference number: 6 (lower is better)
Translates to: VLLPGPCYAVWG*CAPNETLHLAT
Trigger: GGTGGCAAGGTGGAGTGTTTCATTGGGAGCACACCACCCCCAGACCGCATAGCATGGGCCTGGAAGGAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS TCA 72 bp ACTCGTAAGAGGCGTCGTCAGAGAGCTCAGCATCTGTaGTCTCCAGGTTGTACTGCCCAGCGTCTGCGGAGC +
Preference number: 6 (lower is better)
Translates to: TRKRRRQRAQHL*SPGCTAQRLRS
Trigger: GCTCCGCAGACGCTGGGCAGTACAACCTGGAGATCACAGATGCTGAGCTCTCTGACGACGCCTCTTACGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000360089.8
CDS GCA 72 bp GTGGCCTGGCAGGTAAAGACAACACGCTCACCCTCCTaGACCGTCTGTGGCTCAATGGACAGGGTCACTGTA +
Preference number: 6 (lower is better)
Translates to: VAWQVKTTRSPS*TVCGSMDRVTV
Trigger: TACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACCTGCCAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS GCA 72 bp GGGAGGTGTAGGAGAATCGAGTGGCTGTGGCGTACTTaGCAATGGGGTCATACGCCTCATATGGGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: GRCRRIEWLWRT*QWGHTPHMGSA
Trigger: AGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp TGGGGTCCTTCATCTCATACTCCTCCCGGGTGTCGATaGTGTCGCAGCGCAGGTCCTGCTTCAGATCCACAT +
Preference number: 6 (lower is better)
Translates to: WGPSSHTPPGCR*CRSAGPASDPH
Trigger: ATGTGGATCTGAAGCAGGACCTGCGCTGCGACACCATCGACACCCGGGAGGAGTATGAGATGAAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp TGTAGGAGAATCGAGTGGCTGTGGCGTACTTGCCAATaGGGTCATACGCCTCATATGGGGTCCGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: CRRIEWLWRTCQ*GHTPHMGSAPG
Trigger: GCCTGGAGCGGACCCCATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp CGTAGTCCGAGTGCTGGGAGGTGTAGGAGAATCGAGTaGCTGTGGCGTACTTGCCAATGGGGTCATACGCCT +
Preference number: 6 (lower is better)
Translates to: RSPSAGRCRRIE*LWRTCQWGHTP
Trigger: AGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGGACTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp CGCCCTATGTCCAGGTCCGTGGGGTTAATAAGCAGTTaGCTCACGGTGGTCTCCCTCTTCCCATCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RPMSRSVGLISS*LTVVSLFPSFS
Trigger: GCTGAAGGATGGGAAGAGGGAGACCACCGTGAGCCAACTGCTTATTAACCCCACGGACCTGGACATAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS CCA 72 bp GGTAAAGACAACACGCTCACCCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCACTGTAGGAGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GKDNTLTLLHRL*LNGQGHCRRVV
Trigger: CACCACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS TCA 72 bp CTGGGTCCTTACCTTGGGAGAAAGTATCGGAGAGAGTaGGGATCCAGACGAGGAGGCTCAGCATGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: LGPYLGRKYRRE*GSRRGGSACCP
Trigger: CGGACAGCATGCTGAGCCTCCTCGTCTGGATCCTCACTCTCTCCGATACTTTCTCCCAAGGTAAGGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS CCA 72 bp GGTAAAGACAACACGCTCACCCTCCTGCACCGTCTGTaGCTCAATGGACAGGGTCACTGTAGGAGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: GKDNTLTLLHRL*LNGQGHCRRVE
Trigger: CTCAACCCTCCTACAGTGACCCTGTCCATTGAGCCACAGACGGTGCAGGAGGGTGAGCGTGTTGTCTTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360089.8
CDS CCA 72 bp CCGAGTGCTGGGAGGTGTAGGAGAATCGAGTGGCTGTaGCGTACTTGCCAATGGGGTCATACGCCTCATATG +
Preference number: 6 (lower is better)
Translates to: PSAGRCRRIEWL*RTCQWGHTPHM
Trigger: CATATGAGGCGTATGACCCCATTGGCAAGTACGCCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CAA 72 bp ACGCCCTATGTCCAGGTCCGTGGGGTTAATAAGCAGTaGGCTCACGGTGGTCTCCCTCTTCCCATCCTTCAG +
Preference number: 6 (lower is better)
Translates to: TPYVQVRGVNKQ*AHGGLPLPILQ
Trigger: CTGAAGGATGGGAAGAGGGAGACCACCGTGAGCCAACTGCTTATTAACCCCACGGACCTGGACATAGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS CAA 72 bp GGAGGGTGGTGCACATCCAGCTCGATGGAAGTCTCCTaGCCACTAGGGATGGCTTCGTTCATGCTTCGGCAA +
Preference number: 6 (lower is better)
Translates to: GGWCTSSSMEVS*PLGMASFMLRQ
Trigger: TTGCCGAAGCATGAACGAAGCCATCCCTAGTGGCAAGGAGACTTCCATCGAGCTGGATGTGCACCACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000368172.1
ENST00000368173.7
CDS CCA 72 bp GGCGGTGTCATCCTCCCGGTCAGAATGCATCGTAAGTaGCTCTCGGTTCACTGTCTCCACCTTGATATCCAG +
Preference number: 6 (lower is better)
Translates to: GGVILPVRMHRK*LSVHCLHLDIQ
Trigger: CTGGATATCAAGGTGGAGACAGTGAACCGAGAGCCACTTACGATGCATTCTGACCGGGAGGATGACACCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CAA 90 bp AGTGAAGACACGCCCTATGTCCAGGTCCGTGGGGTTAATAAGCAGTaGGCTCACGGTGGTCTCCCTCTTCCCATCCTTCAGCAATTCCGT +
Preference number: 6 (lower is better)
Translates to: SEDTPYVQVRGVNKQ*AHGGLPLPILQQFR
Trigger: ACGGAATTGCTGAAGGATGGGAAGAGGGAGACCACCGTGAGCCAACTGCTTATTAACCCCACGGACCTGGACATAGGGCGTGTCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS CAA 90 bp GTCACTGTAGGAGGGTGGTGCACATCCAGCTCGATGGAAGTCTCCTaGCCACTAGGGATGGCTTCGTTCATGCTTCGGCAAGTGAAGACA +
Preference number: 6 (lower is better)
Translates to: VTVGGWCTSSSMEVS*PLGMASFMLRQVKT
Trigger: TGTCTTCACTTGCCGAAGCATGAACGAAGCCATCCCTAGTGGCAAGGAGACTTCCATCGAGCTGGATGTGCACCACCCTCCTACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359209.11
ENST00000368173.7
CDS GCA 72 bp TCTCAAGCTGTATCTCTCTGGGTCTCTTTCGGTCTTTaGTCCCCCTTTCTCTCCCCTTCTCTTCCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: SQAVSLWVSFGL*SPFLSPSLPSL
Trigger: GAGGGAAGGAAGAGAAGGGGAGAGAAAGGGGGAGCAAAGACCGAAAGAGACCCAGAGAGATACAGCTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS CCA 72 bp GGGTCACATCAGAGCCAATGTCTGTGGTTGTGGGTTTaGGGTCAACTACAATCCGGGGAGCAAAGTGGACAT +
Preference number: 6 (lower is better)
Translates to: GSHQSQCLWLWV*GQLQSGEQSGH
Trigger: ATGTCCACTTTGCTCCCCGGATTGTAGTTGACCCCAAACCCACAACCACAGACATTGGCTCTGATGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS CAA 72 bp CTCTCAAGCTGTATCTCTCTGGGTCTCTTTCGGTCTTaGCTCCCCCTTTCTCTCCCCTTCTCTTCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: LSSCISLGLFRS*LPLSLPFSSFP
Trigger: AGGGAAGGAAGAGAAGGGGAGAGAAAGGGGGAGCAAAGACCGAAAGAGACCCAGAGAGATACAGCTTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS CAA 90 bp TTATTTCTCCTCTCAAGCTGTATCTCTCTGGGTCTCTTTCGGTCTTaGCTCCCCCTTTCTCTCCCCTTCTCTTCCTTCCCTCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LFLLSSCISLGLFRS*LPLSLPFSSFPLSL
Trigger: GAGGGAGAGAGGGAAGGAAGAGAAGGGGAGAGAAAGGGGGAGCAAAGACCGAAAGAGACCCAGAGAGATACAGCTTGAGAGGAGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360089.8
ENST00000368173.7
CDS GCA 72 bp CGTCTGCCTGAGTCACCGACTTCAGCAGCAGCTGGTTaGTGTTACTCAGGACCATATTTGAGTCCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: RLPESPTSAAAG*CYSGPYLSPFW
Trigger: CCAAAAAGGACTCAAATATGGTCCTGAGTAACAGCAACCAGCTGCTGCTGAAGTCGGTGACTCAGGCAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368173.7
CDS CAA 90 bp ACACAGGTAAGGGTCACATCAGAGCCAATGTCTGTGGTTGTGGGTTaGGGGTCAACTACAATCCGGGGAGCAAAGTGGACATTTACTAAA +
Preference number: 6 (lower is better)
Translates to: TQVRVTSEPMSVVVG*GSTTIRGAKWTFTK
Trigger: TTTAGTAAATGTCCACTTTGCTCCCCGGATTGTAGTTGACCCCAAACCCACAACCACAGACATTGGCTCTGATGTGACCCTTACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7
CDS TCA 72 bp CAATCCGGGGAGCAAAGTGGACATTTACTAAAGTGCTaGCATTGGTGCTTCCCACTTTGTTGTGAACCTCAC +
Preference number: 6 (lower is better)
Translates to: QSGEQSGHLLKC*HWCFPLCCEPH
Trigger: GTGAGGTTCACAACAAAGTGGGAAGCACCAATGTCAGCACTTTAGTAAATGTCCACTTTGCTCCCCGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359209.11
ENST00000360089.8
ENST00000368172.1
ENST00000368173.7