Pregenerated sensors for KIR2DS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000274438, ENSG00000276425, ENSG00000278300Ensembl transcript IDs: ENST00000613017.2, ENST00000616472.1, ENST00000616523.1, ENST00000616541.4, ENST00000617284.4
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGACAGAAGACTGAAAGCTAGTCTGAGGGGAGGTGGAACAGCATaGGGGAAGGTGGAACAACACGTGTCTAAGTGCTGCGTTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: ADRRLKASLRGGGTA*GKVEQHVSKCCVKR Trigger: CCTCTTAACGCAGCACTTAGACACGTGTTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGACTAGCTTTCAGTCTTCTGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613017.2 ENST00000616541.4 |
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| 3UTR CCA 90 bp | AGCACGTGTCTAAGTGCTGTGTTAAGAGGGAGCCTCTTGTATGTTTaGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTA | + |
|
Preference number: 1 (lower is better) Translates to: STCLSAVLRGSLLYV*NCEFLSVIAASGRL Trigger: TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACAGCACTTAGACACGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616523.1 ENST00000617284.4 |
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| CDS-3UTR CCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCTAGTTAGGTTGGAGAGGTGGGCAGAACATGCAGGTGTCTaGGGTTACCGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKLVRLERWAEHAGV*GYRFWS Trigger: GCTCCAAAACCGGTAACCCCAGACACCTGCATGTTC...TGCCCACCTCTCCAACCTAACTAGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616472.1 ENST00000617284.4 |
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| CDS-3UTR CAA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCTAGTTAGGTTGGAGAGGTGGGCAAGTAAGCTAGTTAGGTaGGAGAGGTGGGCAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: IAASGRLGSKLVRLERWASKLVR*ERWAGV Trigger: GACCCCTGCCCACCTCTCCAACCTAACTAGCTTACT...TGCCCACCTCTCCAACCTAACTAGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000616472.1 ENST00000616523.1 ENST00000617284.4 |
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