RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIFC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140859

Ensembl transcript IDs: ENST00000379655.8, ENST00000421376.6, ENST00000445690.7, ENST00000465878.6, ENST00000540079.6, ENST00000541240.5, ENST00000543930.5, ENST00000561524.5, ENST00000562311.5, ENST00000562503.5, ENST00000562903.5, ENST00000562984.5, ENST00000563028.1, ENST00000563266.1, ENST00000563295.1, ENST00000564136.5, ENST00000564204.1, ENST00000564891.1, ENST00000565270.1, ENST00000565397.1, ENST00000565481.5, ENST00000565684.5, ENST00000565753.1, ENST00000565871.1, ENST00000566648.5, ENST00000566914.1, ENST00000566975.5, ENST00000567059.5, ENST00000567204.5, ENST00000567479.1, ENST00000569112.5, ENST00000569222.5, ENST00000569619.5, ENST00000623271.1

Found 1645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCCTCCTCCACACTCCCGCCCTCCTCACGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: PPSSTLPPSSRGPVR*WPRPARKSSHPRLS
Trigger: GGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGGGCGGGAGTGTGGAGGAGGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR TCA 90 bp CCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGGCTGTGGCGTCTGACAAGCCGGCTC +
Preference number: 1 (lower is better)
Translates to: PPDGSRAATGPRAGG*VGPCRGLWRLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR CCA 90 bp GGGGCTGGCCAGCTCTGCAAGCTGAGGAGAGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCCTCCACACTCCCGCCCTCCTCACGG +
Preference number: 1 (lower is better)
Translates to: GAGQLCKLRRGAEKA*VRGPPSSTLPPSSR
Trigger: CCGTGAGGAGGGCGGGAGTGTGGAGGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR CCA 90 bp CCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTaGCTGCCTCTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGG +
Preference number: 1 (lower is better)
Translates to: PASQAGERAAESPTR*LPLPAINTARPRGG
Trigger: CCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR CCA 90 bp CAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: QAVAATSPRAAASSG*IQGGYWSQSWGLSG
Trigger: CCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 90 bp AAGAAGAGCCTCCACTCTCGCCTCTACCTCCGGGGGTCCTGGCGCTaGAGCAGGGACAGGCCAGTGAGGGCCCAGCTTCAGGCCCAGCGG +
Preference number: 1 (lower is better)
Translates to: KKSLHSRLYLRGSWR*SRDRPVRAQLQAQR
Trigger: CCGCTGGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGCTGCAGCGCCAGGACCCCCGGAGGTAGAGGCGAGAGTGGAGGCTCTTCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
3UTR CCA 90 bp GCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTGCCGAGGGCTGTGGCGTCTGACAAG +
Preference number: 1 (lower is better)
Translates to: AASSGWIQGGYWSQS*GLSGPVPRAVASDK
Trigger: CTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR TCA 90 bp GATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTaGGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: DFRGKKIRETSEPGR*ASSRIPHPLAASAS
Trigger: GCTGGCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR GCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACAT +
Preference number: 1 (lower is better)
Translates to: PARKSSHPRLSAHAI*TQSHSRETPFPSEH
Trigger: ATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR CCA 90 bp GAGCTGTGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACAGCAG +
Preference number: 1 (lower is better)
Translates to: ELCSFRLVNSVVRLV*PNSNTQGCVLRTQQ
Trigger: CTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 90 bp AACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTaGGTGCTTAGGACACAGCAGAGCCTACATTCAAACCCAGTTGTG +
Preference number: 1 (lower is better)
Translates to: NSVVRLVWPNSNTQG*VLRTQQSLHSNPVV
Trigger: CACAACTGGGTTTGAATGTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR TCA 90 bp TGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: CNLHSEPQPRDTVSF*TCFSSLRGDGAEEE
Trigger: CTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PAINTARPRGGRPCASAHAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 2 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: ASQAGERAAESPTRWLPLEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 2 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR GCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTACCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: APTLDAPGLTRTQALPCVPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LPGRAATPAFPPMQFALRAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
3UTR-3UTR GCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 2 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR CCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR CCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PAINTARPRGGRPCASAHSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
3UTR-3UTR CCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTATTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 2 (lower is better)
Translates to: APTLDAPGLTRTQALPCVLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 2 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 2 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 2 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 2 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 2 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
3UTR-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 2 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 2 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
3UTR-3UTR TCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: ATPAFPPMQFALRATAERPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCCAA +
Preference number: 2 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGVVRLV*PNSNTQ
Trigger: TTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR TCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
3UTR-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGACACCCAAGGGTGCGTaGTTAGGACACAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSTPKGA*LGHSRA
Trigger: GGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: FPPMQFALRATAERHRFLHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
3UTR-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCAAACACCCAAGGGTaGGTGCTTAGGACACAGCAG +
Preference number: 2 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSNTQG*VLRTQQ
Trigger: CTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR TCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: SAHAICTQSHSRETPFPSDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR TCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CAA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 3 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 72 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTaGCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCA +
Preference number: 3 (lower is better)
Translates to: LLTGPSSLMAQA*QEEQPPPPFRP
Trigger: TGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR CCA 72 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTGAGTGGGCCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: AAASSGWIQGGY*SQSWGLSGPVP
Trigger: CGGCACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR CCA 72 bp GCCGCGACTTCCCCGAGGGCTGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: AATSPRAAASSG*IQGGYWSQSWG
Trigger: CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGGGGAAGTCGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR CAA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: AINTARPRGGRPCASAHPQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
3UTR-3UTR CAA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 3 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 72 bp CTCCACTCTCGCCTCTACCTCCGGGGGTCCTGGCGCTaGAGCAGGGACAGGCCAGTGAGGGCCCAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: LHSRLYLRGSWR*SRDRPVRAQLQ
Trigger: CTGAAGCTGGGCCCTCACTGGCCTGTCCCTGCTGCAGCGCCAGGACCCCCGGAGGTAGAGGCGAGAGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
3UTR CCA 72 bp TCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTaGCCGCGACTTCCCCGAGGGCTGCAGCTTCCTCCG +
Preference number: 3 (lower is better)
Translates to: SGPAGSHPSHRQ*PRLPRGLQLPP
Trigger: CGGAGGAAGCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR TCA 72 bp GGGGCTGAGTGGGCCCGTGCCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCTAGATGCTCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: GAEWARAEGCGV*QAGSHSRCSWL
Trigger: AAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR CCA 72 bp CAGCTCTGCAAGCTGAGGAGAGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCCTCCACACTCCCGCCC +
Preference number: 3 (lower is better)
Translates to: QLCKLRRGAEKA*VRGPPSSTLPP
Trigger: GGGCGGGAGTGTGGAGGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR CCA 72 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACC +
Preference number: 3 (lower is better)
Translates to: AAIGATNPPQSP*FLGLPRGSSPT
Trigger: GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
3UTR-3UTR CAA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
3UTR-3UTR CAA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 3 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR CAA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: PPHGAQFADGPGLPGRAATCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CAA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR CAA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CAA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
3UTR-3UTR CAA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR GCA 72 bp ACCGTCACGATGAGCAGCGCGTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTA +
Preference number: 3 (lower is better)
Translates to: TVTMSSACEREL*SFRLVNSVVRL
Trigger: TAATCGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGTGACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 72 bp AAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGAGAGACACCGTTTCCT +
Preference number: 3 (lower is better)
Translates to: KSSHPRLSAHAI*TQSHSRETPFP
Trigger: AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
3UTR-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR TCA 72 bp CACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTGAGGGGAGACGGGGCA +
Preference number: 3 (lower is better)
Translates to: HSEPQPRDTVSF*TCFSSLRGDGA
Trigger: TGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
3UTR CCA 72 bp TCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGG +
Preference number: 3 (lower is better)
Translates to: SFRLVNSVVRLV*PNSNTQGCVLR
Trigger: CCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR GCA 72 bp GTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTaGGTGCTTAGGACACAGCAGAGCCTACATTCAAAC +
Preference number: 3 (lower is better)
Translates to: VRLVWPNSNTQG*VLRTQQSLHSN
Trigger: GTTTGAATGTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR-3UTR CAA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCAGCGCCCGGCGAGACTaGCGCTCCGGCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASSARRD*RSGSTP
Trigger: GGGCGTGGAGCCGGAGCGTCAGTCTCGCCGGGCGCT...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR TCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACACCAGGCAGCCGGCCTaGCGGAGGCAGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHTRQPA*RRQDPG
Trigger: GCCTGGATCCTGCCTCCGCCAGGCCGGCTGCCTGGT...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379655.8
ENST00000445690.7
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPLRARH*ARAGRA
Trigger: AGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCACCAGGCAGCCGGCCTaGCGGAGGCAGGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPTRQPA*RRQDPG
Trigger: GCCTGGATCCTGCCTCCGCCAGGCCGGCTGCCTGGT...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379655.8
ENST00000445690.7
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPCWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPAINTARPRGGRPCASALLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCACAGCACGGCCCCGTaGCGGGAGGCCATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTHSTAP*REAMRL
Trigger: GAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCTTGCACCCCTTGTCCTaGAGGGCCTGCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPLHPLS*RACCRV
Trigger: GACCCTGCAGCAGGCCCTGCAGGACAAGGGGTGCAA...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465878.6
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGCAGCGAGGGCGTaGCTCCCAGGTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFPAARA*LPGSTS
Trigger: GGACGTGGAACCTGGGAGCCACGCCCTCGCTGCGGG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445690.7
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCAGAGCAGTGTGGCTGTaGTCAGGGGCTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSRAVWL*SGAPAS
Trigger: GGAGGCGGGAGCCCCTGACCACAGCCACACTGCTCT...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCACGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSARAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCAGGTTCCACGTCCTaGGAGAGGGGACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPPGSTS*ERGPWP
Trigger: AGGCCATGGTCCCCTCTCGCAGGACGTGGAACCTGG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCCAGGTTCCACGTCCTaGGAGAGGGGACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAPGSTS*ERGPWP
Trigger: AGGCCATGGTCCCCTCTCGCAGGACGTGGAACCTGG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
CDS-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCATCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSASWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCAGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPAINTARPRGGRPCASADLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFCWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACACAGCACGGCCCCGTaGCGGGAGGCCATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRHSTAP*REAMRL
Trigger: GAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCACAGCACGGCCCCGTaGCGGGAGGCCATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAHSTAP*REAMRL
Trigger: GAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
3UTR CAA 72 bp GCAGCAATGACGTCCCCCAGAGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGCAGGCGGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AAMTSPRADSDL*MCCASRRRLPS
Trigger: CGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCATTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHLRARH*ARAGRA
Trigger: AGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTLRARH*ARAGRA
Trigger: AGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCACCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPREGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACAGCGAGCCAGGCAGGTaGGCGAGCAGCAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHSEPGR*ASSRIP
Trigger: GGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCT...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACATCAGCAGGTCCCGGTaGTTCTCCAAGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHISRSR*FSKSVP
Trigger: GGGCACCGACTTGGAGAAGCACCGGGACCTGCTGAT...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAADSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPCEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSTMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLRGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTGCACCTCGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATCTSSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGAGGTGCA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACCCGCAGCGAGGGCGTaGCTCCCAGGTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRPAARA*LPGSTS
Trigger: GGACGTGGAACCTGGGAGCCACGCCCTCGCTGCGGG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
CDS-3UTR CCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCAGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LPAINTARPRGGRPCASAGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPCWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSAPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACACAGCACGGCCCCGTaGCGGGAGGCCATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATHSTAP*REAMRL
Trigger: GAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGAATCCCCCACCCGCTaGCTGCCTCTGCCAGCCATA +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTESPTR*LPLPAI
Trigger: TATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGLRARH*ARAGRA
Trigger: AGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR TCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCAGGGCACACGGGAGTaGCAGCTCACGATGCACCAC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFQGTRE*QLTMHH
Trigger: GTGGTGCATCGTGAGCTGTCACTCCCGTGTGCCCTG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTATCAGCAGGTCCCGGTaGTTCTCCAAGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATISRSR*FSKSVP
Trigger: GGGCACCGACTTGGAGAAGCACCGGGACCTGCTGAT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSASRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCATGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSAWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGACTTCCCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATDFPEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGGGAAGTC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: AQRLLAHPLRRGLASSASSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCAGGCAGCCGTGTCCTTaGACGCGCTGGCGCACATGC +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSARQPCP*TRWRTC
Trigger: GCATGTGCGCCAGCGCGTGCAAGGACACGGCTGCCT...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGCCTGCACCTCGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERACTSS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGAGGTGCAGGC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CGTAGCCCAGGCCCCAGCTCCACAGAGCGCACCCTCTCAGCAAACTTGAGGGAATGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSPGPSSTERTLSANLRECWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...TTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGGAATCCCCCACCCGCTaGCTGCCTCTGCCAGCCATA +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSESPTR*LPLPAI
Trigger: TATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTC...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCACGCCCGCCTaGCTCTGGGCTGTCGGTTAC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRGSTPA*LWAVGY
Trigger: GTAACCGACAGCCCAGAGCCAGGCGGGCGTGGAGCC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR CCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCTCCTCTAGAGCAGTGTaGCTGTGGTCAGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSSSRAV*LWSGAP
Trigger: GGGAGCCCCTGACCACAGCCACACTGCTCTAGAGGA...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCACTTTCCACAGGAAATaGTTAACTCGGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPTFHRK*LTRAAA
Trigger: CGCCGCGGCCCGAGTTAATCATTTCCTGTGGAAAGT...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379655.8
CDS-3UTR TCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSAASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAAGCGAGCCAGGCAGGTaGGCGAGCAGCAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERSEPGR*ASSRIP
Trigger: GGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGCCTCCACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGASTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSAALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAARSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTATCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGCEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATCEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATATMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRTMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSASASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTATCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSADLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCACCAGCCACCTGCCTaGGGCCCAGGGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPHQPPA*GPGFCS
Trigger: AGAACAGAACCCTGGGCCGCAGGCAGGTGGCTGGTG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCTACCCACCAGCCACCTaGCTGCGGCCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAYPPAT*LRPRVL
Trigger: CAGAACCCTGGGCCGCAGGCAGGTGGCTGGTGGGTA...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGGGGCCACACAGCCTTaGAGGAACAGCAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGGATQP*RNSSVR
Trigger: TCTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGGGGGCCACACAGCCTTaGAGGAACAGCAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGGATQP*RNSSVR
Trigger: TCTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCC...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
64% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPLVTAD*GIFSTP
Trigger: GGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSATGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSALTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHCWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCATTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SAQRLLAHPLRRGLASSALRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSARACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEALPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PAINTARPRGGRPCASAHSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACCGTCACACAGGCAGTaGCCGCGACTTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRPSHRQ*PRLPRG
Trigger: CCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379655.8
CDS-3UTR CCA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCGAATCCCCCACCCGCTaGCTGCCTCTGCCAGCCATA +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPESPTR*LPLPAI
Trigger: TATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTC...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCCTTGTTTACCAGCCTaGGCAGAGACCGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGPCLPA*AETGAS
Trigger: GCTAGCTCCGGTCTCTGCCCAGGCTGGTAAACAAGG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000465878.6
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGCAGAGTGTACCCCCTaGCGGGCTTTGCTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATAECTP*RALLRE
Trigger: CTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCAGAGCTGGGGGCTaGGTGGGCCCGTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSPRAGG*VGPCRG
Trigger: CCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCGGGGCCCAGTTCGCTaGTGGCCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPRGPVR*WPRPAR
Trigger: CCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCGCAGAGCTCTaGCCAGCTTGGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPQPAEL*PAWPEG
Trigger: TCCCTCTGGCCAAGCTGGTCAGAGCTCTGCGGGCTG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR TCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCGCAGGAACAGCAGTGTaGGAAAGCAGCCGATCAGAA +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSAGTAV*ESSRSE
Trigger: TTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGC...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCCAGGTTCCACGTCCTaGGAGAGGGGACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAPGSTS*ERGPWP
Trigger: AGGCCATGGTCCCCTCTCGCAGGACGTGGAACCTGG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPREVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRTMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTAACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVTMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEADLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAEREGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGCGGCGCGTTCCCATaGCAACCGGCTCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPRGAFP*QPAPTP
Trigger: CGGGGTCGGAGCCGGTTGCCATGGGAACGCGCCGCG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379655.8
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTLVTAD*GIFSTP
Trigger: GGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATALAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GACCAGCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DQRARQVSEQQNPPPAGCQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...GCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCTATTCTCTACATTCATaGTGCCACCAGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AINTARPRGGRPCASAHPYSLHS*CHQLPG
Trigger: CCCGGGAAGCTGGTGGCACCATGAATGTAGAGAATA...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465878.6
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCGTCACACAGGCAGTaGCCGCGACTTCCCTGTACC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLPSHRQ*PRLPCT
Trigger: GGTACAGGGAAGTCGCGGCCACTGCCTGTGTGACGG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565397.1
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACAGAGGGAATGCAGCTaGTTCCCCCTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRQRECS*FPLLCA
Trigger: GGCACAGAGCAGGGGGAATCAGCTGCATTCCCTCTG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTTCTTCTTTCGTCCCCTaGCTCTGGCTCTTGCACCCC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSSFVP*LWLLHP
Trigger: GGGGTGCAAGAGCCAGAGTCAGGGGACGAAAGAAGA...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465878.6
CDS-3UTR GCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGATTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTATCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp AAACTTGAGGGAATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGCCTCGGCCCCCGACTTaGCCACGCGCTCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KLEGIERLASVLLHGGHLPRPPT*PRAPSQ
Trigger: CTGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGG...CAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAAACACCCAAGGGTaGGTGCTTAGGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSNTQG*VLRTQQ
Trigger: CTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLLHFGH*SPRHRR
Trigger: TCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRLHFGH*SPRHRR
Trigger: TCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLHFGH*SPRHRR
Trigger: TCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGATGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTAAGCTTGTCACGGAGCTaGGCGCTCTCCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVSLSRS*ALSWLC
Trigger: GCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCT...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCATTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSASPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGAGTGTTTGCTGGGGGTaGGAGGCGGGATACCCACCA +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLSVCWG*EAGYPP
Trigger: TGGTGGGTATCCCGCCTCCCACCCCCAGCAAACACT...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR CCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGGCAGAGTGTACCCCCTaGCGGGCTTTGCTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALAECTP*RALLRE
Trigger: CTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGC...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
3UTR CAA 72 bp TCTGACAAGCCGGCTCCCACTCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTGCCCTGCGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SDKPAPTLDAPG*TRTQALPCVAQ
Trigger: CTGGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCTCGCACCGTCACGATaGGCAGCGCGTGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSLAPSR*AARASG
Trigger: CCCGCTCGCACGCGCTGCTCATCGTGACGGTGCGAG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTTAGAGACTGGGAAGTaGAGGCTCAGAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATLETGK*RLREEV
Trigger: CACTTCCTCTCTGAGCCTTCACTTCCCAGTCTCTAA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTCTTTTGAGGTCACCTaGCCAGTAAGTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSFEVT*PVSGGP
Trigger: AGGTCCACCACTTACTGGTCAGGTGACCTCAAAAGA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTTCAGGTGTTCTACATaGGCAGTCAAACCCACGGAG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGFRCST*AVKPTE
Trigger: CTCCGTGGGTTTGACTGCTCATGTAGAACACCTGAA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTAGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEALCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACGTCCGCAGTGCCGGCTaGAAGGTCAGCAAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHVRSAG*KVSKLV
Trigger: GACCAACTTGCTGACCTTGCAGCCGGCACTGCGGAC...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CGTAGCCCAGGCCCCAGCTCCACAGAGCGCACCCTCTCAGCAAACTTGAGGGAATCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: RSPGPSSTERTLSANLRESEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...TTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTACCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEACEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSCEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR GCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGGGGCTGGCCAGCTCTaGAAGCTGAGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSGAGQL*KLRRGA
Trigger: GGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCC...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAGGGGCGGGGAGGGCTaGCATTGGTGCCACCAACCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLARGGEG*HWCHQP
Trigger: GGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACCCCCTGGCGGGCTTTaGTTAGAGAGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLPPGGL*LERQSS
Trigger: TGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLVTAD*GIFSTP
Trigger: GGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRLVTAD*GIFSTP
Trigger: GGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHLHFGH*SPRHRR
Trigger: TCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLHFGH*SPRHRR
Trigger: TCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLACWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLALLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLLQQQ*EAAHLP
Trigger: CGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATATSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSALRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSARKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTATCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATASPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACCTTGTTTACCAGCCTaGGCAGAGACCGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERPCLPA*AETGAS
Trigger: GCTAGCTCCGGTCTCTGCCCAGGCTGGTAAACAAGG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000465878.6
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCGATCAGAAGCCAGTaGTGGATAGGGCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFPIRSQ*WIGLET
Trigger: TGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
3UTR CAA 72 bp GAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCGAGAGACACCGTTTCC +
Preference number: 4 (lower is better)
Translates to: EEQPPPPFRPCN*HSEPQPRDTVS
Trigger: GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTATGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp GCGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ASQAGERAAESPTRWLPLQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...CAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp ACCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TLLEGEGRGGLPLVPPTHTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...GTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACAGCAGAGCCTACAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: CGQTQTPKGACLGHSRAYSAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGCAGGAACAGCAGTGTaGGAAAGCAGCCGATCAGAA +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPAGTAV*ESSRSE
Trigger: TTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGATTCCCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRFPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGGAA...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565397.1
CDS-3UTR GCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSACELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCATCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTTCAGGTGTTCTACCTaGTGGGTAACCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGFRCST*WVTLDK
Trigger: CTTGTCCAAGGTTACCCAGCAGGTAGAACACCTGAA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLVTAD*GIFSTP
Trigger: GGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLCWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTACAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGACGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGATCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGGTTCAGCTTCCCCGTaGTGCGGAGGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFGSASP*CGGLCC
Trigger: GCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTTGCGGAAGGGCACGTaGCCCTGGCGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRLRKGT*PWRERR
Trigger: CCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGTACCACCATGAGTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: IERLASVLLHGGHLYHHEYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...CTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGGGGAGGGCTGCCATTaGTGCCACCAACCCACCCCA +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPGEGCH*CHQPTP
Trigger: TGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGGAAACTTACAATCCTaGCAGAAGGAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATGNLQS*QKEEET
Trigger: TGTCTCCTCCTCCTTCTGCCAGGATTGTAAGTTTCC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLATWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSASALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTGCGGAGGCCTGTGCTaGAGTCCACGCCTCGCACCG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTCGGLC*SPRLAP
Trigger: CGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFSASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGAGGGCTGCCATTGGTaGCACCAACCCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPEGCHW*HQPTPV
Trigger: GACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCAGCTGATTCCCCCTaGTCTGTGCCCGACCCGTGT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFAADSP*SVPDPC
Trigger: ACACGGGTCGGGCACAGAGCAGGGGGAATCAGCTGC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp GCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGGATCCACCCCCAAACTaGAATGCGACATTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGSHSRCSWLDQDPSSALDPPPN*NATFVS
Trigger: GCTCACAAATGTCGCATTGCAGTTTGGGGGTGGATC...CAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTACCCCCTGGCGGGCTTTaGTTAGAGAGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: APTLDAPGLTRTQALPCVPPGGL*LERQSS
Trigger: TGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGG...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEALTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCCGCAGGCTGGCAATaGTCTCGTGGCTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPAGWQ*SRGCHA
Trigger: TGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLATGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSLTGGD*ARRLAM
Trigger: CATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAA...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLICWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTAGGGCCTGCACCTCCTaGAACACGTCCTGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPRACTS*NTSCCE
Trigger: CTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCT...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLALPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCCGTCACACAGGCAGTaGCCGCGACTTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTPSHRQ*PRLPRG
Trigger: CCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379655.8
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGAATCCCCCACCCGCTaGCTGCCTCTGCCAGCCATA +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFESPTR*LPLPAI
Trigger: TATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGACTGATGCAGGGAGAGTaGGGTTTGCCAGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRLMQGE*GLPVFA
Trigger: AGCAAACACTGGCAAACCCCACTCTCCCTGCATCAG...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR CCA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGGAAACTTACAATCCTaGCAGAAGGAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFGNLQS*QKEEET
Trigger: TGTCTCCTCCTCCTTCTGCCAGGATTGTAAGTTTCC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATPAFPPMQFALRATAERISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PARKSSHPRLSAHAICTQISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTEGCGV*QAGSHS
Trigger: AGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGCAGGGACAGGCCAGTaGGGGCCCAGCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLAGTGQ*GPSFRP
Trigger: GGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCAGCGAGCCAGGCAGGTaGGCGAGCAGCAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: IGFQREENSRDQRARQVSSEPGR*ASSRIP
Trigger: GGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCT...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR TCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCAGGCACTCAGACCCTaGTGCAGGGAGAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFQALRP*CRESGV
Trigger: AACCCCACTCTCCCTGCATCAGGGTCTGAGTGCCTG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCAGGGCACACGGGAGTaGCAGCTCACGATGCACCAC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSQGTRE*QLTMHH
Trigger: GTGGTGCATCGTGAGCTGTCACTCCCGTGTGCCCTG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AAACTTGAGGGAATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLEGIERLASVLLHGGHLTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...CAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGCGCTCTCCTGGCTGTaGTCACAACCTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSALSWL*SQPGQG
Trigger: TCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATASALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp AAGCCGGCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: KPAPTLDAPGLTRTQALPSALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLADSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCCTGGAACACGTCCTaGTGCGAGGCCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLSWNTS*CEACGE
Trigger: CTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGACTTCCCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPDFPEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGGGAAGTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379655.8
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCATGGTTCTTGGGTCTaGCCAGAGGCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAHGSWV*PEAPRP
Trigger: TGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCGTCAGGCCGAGGGCTaGAGCTTCCTCCGGATGGAT +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSRQAEG*SFLRMD
Trigger: ATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLLAMVS*LSRRRR
Trigger: TCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAG...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACAACTGGGCCCGCAGGCTaGCAATGGTCTCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTTGPAG*QWSRGC
Trigger: ACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGT...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGGGCCTGCTTGGTCTTaGACGACTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAGPAWS*TTPPPL
Trigger: CAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGCTGGTTCCGGGCCTaGGACTCGCTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRACWFRA*DSLRAC
Trigger: GCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSRAVS*CELCSC
Trigger: GCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLALLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCCGTGCCGAGGGCTGTaGCGTCTGACAAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAPCRGL*RLTSRL
Trigger: GAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGAGCTGGGGGCTGAGTaGGCCCGTGCCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLELGAE*ARAEGC
Trigger: ACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTACTGGTCCCAGAGCTaGGGGCTGAGTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRYWSQS*GLSGPV
Trigger: CACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTATCCAGGGCGGCTACTaGTCCCAGAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTIQGGY*SQSWGL
Trigger: CAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGAT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCACCCCAGTCCCCATaGTTCTTGGGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPPPQSP*FLGLPR
Trigger: TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAA +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTPHPLW*LAGHEQ
Trigger: TTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGG...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCAGCGCAGGGCAGCAATaGCGTCCCCCAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRASAGQQ*RPPEPT
Trigger: TGTCGGCTCTGGGGGACGTCATTGCTGCCCTGCGCT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCAGGGCACACGGGAGTaGCAGCTCACGATGCACCAC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRQGTRE*QLTMHH
Trigger: GTGGTGCATCGTGAGCTGTCACTCCCGTGTGCCCTG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAACAAAGCATGTCTTTTaGGGTCACCTGACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLTKHVF*GHLTSK
Trigger: CTTACTGGTCAGGTGACCTCAAAAGACATGCTTTGT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR TCA 90 bp CGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCGAGGGCTGCAGCTTCAGTAGCAGAAGATaGAAAGAGTTAGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: RGHIRHTGSGRDFPEGCSFSSRR*KELVPH
Trigger: ATGTGGAACTAACTCTTTTCATCTTCTGCTACTGAA...GCTGCAGCCCTCGGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTTWAGT*WLCAQL
Trigger: GAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSSAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGEGPQ*RLQGQQ
Trigger: TTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGCTCGCGGCGGTACTTaGGCAGCAGCTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTARGGT*AAAPGC
Trigger: ACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACAGCAGAGCCTACCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: CGQTQTPKGACLGHSRAYHFLRS*SSRRYL
Trigger: CAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTG...GTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRHTAAH*RLGTAG
Trigger: TCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLACEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRATMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGGTGCGGAGGCCTGTaGTGCAGTCCACGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAWCGGL*CSPRLA
Trigger: TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLISASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNDLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGGGGCCACACAGCCTTaGAGGAACAGCAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFGATQP*RNSSVR
Trigger: TCTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR CCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACATGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRAASSG*IQGGYW
Trigger: CCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGC...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGGGGCCGAGAAAGCCTaGGTGAGAGGCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLGAEKA*VRGPPS
Trigger: GGAGGGTGGGCCTCTCACCCAGGCTTTCTCGGCCCC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGCAGAGTGTACCCCCTaGCGGGCTTTGCTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAAECTP*RALLRE
Trigger: CTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCAGCCAGGCAGTCCTTaGGTCGCAGCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAQPGSP*VAAPPQ
Trigger: CTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGGCCCGCTCCAGCTCTaGCTCGTACATGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTGPLQL*LVHGNL
Trigger: CAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRARAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAATPAFPPMQFALRATAQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGCAGGGCCCGCTGGTTaGTACCTGGGTTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLAGPAG*YLGSQR
Trigger: CCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCCGACAGCGACTTGTTaGTGTGCTGCGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAPTATC*CAAPPA
Trigger: TGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCTGCAGCAGGTAGGTaGGCTTGGAGTTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPAAGR*AWSCGR
Trigger: CCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGCCAGCTCTGCAAGCTaGGGAGAGGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAASSAS*GEGPRK
Trigger: CTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTQRRIS*LSRSFS
Trigger: GGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRDLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLARSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: IGFQREENSRDQRARQVSDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAIATCS*RCWFRA
Trigger: GGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTAT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTGGAACACGTCCTGCTaGGAGGCCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTWNTSC*EACGEK
Trigger: CTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAEVTRA*TSWNTS
Trigger: GGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCTGGTACATACAGCTaGCCACTGCCGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPGTYS*PLPSGH
Trigger: GTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTACGATGAGCAGCGCGTaGGAGCGGGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLTMSSA*ERELCS
Trigger: CGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCAGCTTCCCCGTGGTaGGGAGGCCTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRASASPW*GGLCCS
Trigger: ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGACTTGTTGATGTGCTaGGCCTCCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRADLLMC*ASRRRL
Trigger: CAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGGCTCCCACTCTAGATaGTCCTGGCTTGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSGSHSR*SWLDQD
Trigger: GTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTCTCTACATTCATGGTaGCACCAGCTTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSSLHSW*HQLPGP
Trigger: AGGCCCGGGAAGCTGGTGGCACCATGAATGTAGAGA...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465878.6
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGCACTGTACTCCCAGTaGCTGGAACAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPALYSQ*LEQCLV
Trigger: TACCAGGCACTGTTCCAGGCACTGGGAGTACAGTGC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR GCA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTAAACGAGATGATATATaGGAAGGCAGGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATKRDDI*EGRDFC
Trigger: ACAAAAATCCCTGCCTTCGCATATATCATCTCGTTT...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLARKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTLLRGL*GEDLVQ
Trigger: CTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCCGCTGGTTGATACCTaGGTTCTCAGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTPLVDT*VLSGPL
Trigger: GAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAGCTGCAGGGCCCGCTaGTTGATACCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSCRAR*LIPGFS
Trigger: TGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLLPTAV*AQPDLQ
Trigger: CTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTGTCCTTGCACGCGCTaGCGCACATGCACTCACACT +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLCPCTR*RTCTHT
Trigger: AGTGTGAGTGCATGTGCGCCAGCGCGTGCAAGGACA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541240.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCATTGTAGTCGTTGGTaGGGGTCCGCAGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAHCSRW*GSAVPA
Trigger: AGCCGGCACTGCGGACCCTCACCAACGACTACAATG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCGCGCACCTGCCGCTTaGGCCCATTGTAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLRAPAA*AHCSRW
Trigger: CCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCCTGGTTGTTGCTGTTaGCCTCCTCGATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAPGCCC*PPRWPG
Trigger: GCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTCAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCATCAATGCAAGAGGTaGCCAGGGCCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRHQCKR*PGPAPP
Trigger: AGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
CDS-3UTR TCA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRAATPAFPPMQFALRATQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFGLRNR*ETSVSS
Trigger: AGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCC...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR TCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGCAGGAACAGCAGTGTaGGAAAGCAGCCGATCAGAA +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAAGTAV*ESSRSE
Trigger: TTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCTACTTGAGGTCACCTaGCCAGTAAGTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPLLEVT*PVSGGP
Trigger: AGGTCCACCACTTACTGGTCAGGTGACCTCAAGTAG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAFVRSS*SSASQR
Trigger: GCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRADLLAL*AALAAR
Trigger: CCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSRSVF*CTSRFS
Trigger: GCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCTGCATAGCCACCTaGTCCTGCAGGTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTLCIAT*SCRCWF
Trigger: GAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLISDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACTCAGACGCCTTCTCCTaGACCTCGGAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNSDAFS*TSEKSS
Trigger: GCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCCGCCCATGCAATTTaGACTCAGAGCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLSAHAI*TQSHSR
Trigger: TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCATTCCCCCTGCTCTGTaGCCGACCCGTGTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAIPPAL*PTRVKV
Trigger: AACTTTAACACGGGTCGGGCACAGAGCAGGGGGAAT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR GCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTACACCCAAGGGTGCGTaGTTAGGACACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTTPKGA*LGHSRA
Trigger: GGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLTSWA*LMSFSF
Trigger: GAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACAAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGCTGTGCTCACAACCTaGGCAGGGACCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAAVLTT*AGTCWL
Trigger: AAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTAGCTGGGCGCTCTCCTaGCTGTGCTCACAACCTGGG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLSWALS*LCSQPG
Trigger: CCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTATCTCCAGCTGCAGCTaGGACAGCTTGTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTISSCS*DSLSRS
Trigger: GCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGAT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGCTCTGACTCGTACATaGCAATCTGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAALTRT*QSAPGA
Trigger: GGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFQRPPQ*PGSCPL
Trigger: AAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLISPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCTCCACCTGGGCTCTaGCAAAGGCCTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSPPGL*QRPPQW
Trigger: CCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAAFIST*ALAKAS
Trigger: GGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLITSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: IGFQREENSRDQRARQVSTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGACCTCCTCGATGGCCTaGCCTATCTCGGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRTSSMA*PISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSLRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCGCACGAGCTCATTGTaGCACTTCTTACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLRTSSL*HFLRSC
Trigger: GCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCG...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp AAACTTGAGGGAATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KLEGIERLASVLLHGGHLRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...CAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNPLCSR*MMESSS
Trigger: CGACGACGACTCCATCATCCACCTGCTGCACAAGGG...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTTGCCGGCGCCCGTCTaGCCGTACGCAAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLLPAPV*PYAKMQ
Trigger: CTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAA...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGAACTCAGTCAGCCCTaGTACATACAGCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPELSQP*YIQLPT
Trigger: AGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSTLCT*NSVSPG
Trigger: ACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCGATCAGAAGCCAGTaGTGGATAGGGCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPPIRSQ*WIGLET
Trigger: TGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACAGCAGAGCCTACCCGATCAGAAGCCAGTaGTGGATAGGGCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: CGQTQTPKGACLGHSRAYPIRSQ*WIGLET
Trigger: TGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGG...GTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRACAAGG*WSRRRH
Trigger: ATGCCGACGACGACTCCATCATCCACCTGCTGCACA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SAHAICTQSHSRETPFPSTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLITPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTTPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LPGRAATPAFPPMQFALRDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCAGGTGTTCTACCTTaGTCATCTCCACTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSGVLP*SSPLPP
Trigger: GGGCGGCAGTGGAGATGATCAAGGTAGAACACCTGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCGCCATCTCCAGCTaGAGCTGGGACAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRASAISS*SWDSLS
Trigger: TGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIRSVFC*TSRFSS
Trigger: AGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGACTCGCTGAGGGCCTaGTTGGTCTTGGACGACTCC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLDSLRA*LVLDDS
Trigger: GGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRACEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCGCCTTTCCGCCCATaGAATTTGCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPPFRP*NLHSEP
Trigger: TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCTTGATCATCTCCACTaGCGCCCCTGCCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLLDHLH*RPCQAL
Trigger: GAGTGCCTGGCAGGGGCGGCAGTGGAGATGATCAAG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCCCCTGGCGGGCTTTaGTTAGAGAGGCAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPPGGL*LERQSS
Trigger: TGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IGFQREENSRDQRARQVSSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLWAGTC*LCAQLL
Trigger: CAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCACTCTAGATGCTCCTaGCTTGACCAGGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIHSRCS*LDQDPS
Trigger: GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACAAGAGTTAGTTCCACATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTRVSST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGTGGAACTAACTCT...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCACACCTGTACCACCATaGGGGTCTTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRATPVPP*GSCCHH
Trigger: GTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTTAGAGACTGGGAAGTaGAGGCTCAGAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: FPPMQFALRATAERHRFLLETGK*RLREEV
Trigger: CACTTCCTCTCTGAGCCTTCACTTCCCAGTCTCTAA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR TCA 90 bp AAACTTGAGGGAATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGTTAGAGACTGGGAAGTaGAGGCTCAGAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLEGIERLASVLLHGGHLLETGK*RLREEV
Trigger: CACTTCCTCTCTGAGCCTTCACTTCCCAGTCTCTAA...CAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR GCA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IGFQREENSRDQRARQVSCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR GCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRCELCS*CSISFS
Trigger: GCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRASWCEL*SCCSIS
Trigger: GGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCGAAGGACACAGGCTTaGCCTTGTGCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLRRTQA*PCAAGG
Trigger: TCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLSEKSS*RARWLI
Trigger: TATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGA...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIMSSTL*TWNSVS
Trigger: GCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACAT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGCGAGCGGGAGCTGTaGTCGTTCAGGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLCEREL*SFRLVN
Trigger: GTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCA...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGCAAGGTCAGCAAGTTaGTCCGGACGCCTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAARSAS*SGRLLD
Trigger: ATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRALRSSS*LLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCATCCTCTTTGGTGACTaGCCGGACACGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIILFGD*PDTSNH
Trigger: GTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGAT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCAAGTCACAGCATTGGTaGCCTCAGGTCCTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLIKSQHW*PQVLPH
Trigger: ATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTAGTCCCCATGGTTCTTaGGTCTGCCCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLSPHGS*VCPEAP
Trigger: AGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGAGAGTTAGTTCCACATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRRVSST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGTGGAACTAACTCT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR CCA 90 bp ATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGTACCACCATGAGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCCAA +
Preference number: 4 (lower is better)
Translates to: IERLASVLLHGGHLYHHEVVRLV*PNSNTQ
Trigger: TTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...CTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTGTACTCCCAGTGCCTaGAACAGTGCCTGGTACACA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRCTPSA*NSAWYT
Trigger: TGTGTACCAGGCACTGTTCCAGGCACTGGGAGTACA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGACTCAAACACCTTGTTaGTGTCGTCCACGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRTQTPC*CRPRSA
Trigger: TGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCATGTTTCTCATCTTTaGGGGGAGACGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAHVSHL*GETGQK
Trigger: CTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCTTTTGAGGTCACCTaGCCAGTAAGTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSFEVT*PVSGGP
Trigger: AGGTCCACCACTTACTGGTCAGGTGACCTCAAAAGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS-3UTR GCA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCAGCTCTGACAGCATaGCTTTGCTTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: ALRATAERHRFLLNMFLISALTA*LCFPPS
Trigger: AGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLSRLTS*AWLMSF
Trigger: GAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCGAAAGTCACAGCATTaGTGGCCTCAGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLRKSQH*WPQVLP
Trigger: GGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR TCA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCAAAGATGCAGACATTaGAGCCATCAATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSQRCRH*SHQCKR
Trigger: CCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTG...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCATCTCCAGTTTTTCCTaGGGCTCTTTCCCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAISSFS*GSFPSR
Trigger: CCTGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGAT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LSAHAICTQSHSRETPFPDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLPARFS*TAFIST
Trigger: GGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGG...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR GCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGATCCACCCCCAAACTaGAATGCGACATTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRADPPPN*NATFVS
Trigger: GCTCACAAATGTCGCATTGCAGTTTGGGGGTGGATC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRVVRLV*PNSNTL
Trigger: CAAGGTGTTTGAGTTTGGCCACACTAATCGCACGAC...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR TCA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTACAAAGCATGTCTTTTaGGGTCACCTGACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTTKHVF*GHLTSK
Trigger: CTTACTGGTCAGGTGACCTCAAAAGACATGCTTTGT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGACACCGTTTCCTTCTaGACATGTTTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRDTVSF*TCFSSL
Trigger: CAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTC...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CCA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCAATGAGGCTACCTCATaGAAGCTGTCTCGAGGATTA +
Preference number: 4 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRANEATS*KLSRGL
Trigger: TAATCCTCGAGACAGCTTCCATGAGGTAGCCTCATT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR TCA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTTCAGTAGCAGAAGATaGAAAGAGTTAGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRFSSRR*KELVPH
Trigger: ATGTGGAACTAACTCTTTTCATCTTCTGCTACTGAA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS TCA 90 bp GGCCCGTGCCGAGGGCTGTGGCGTCTGACAAGCCGGCTCCCACTGTaGGCAGGGAAGGGCGGATGGGCGGGGGCCACGGCTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GPCRGLWRLTSRLPL*AGKGGWAGATAALA
Trigger: GGCCAGGGCAGCCGTGGCCCCCGCCCATCCGCCCTTCCCTGCTCACAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS TCA 90 bp CCAGAGCTGGGGGCTGAGTGGGCCCGTGCCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTGTGAGCAGGGAAGGGCGGATGGGCGG +
Preference number: 5 (lower is better)
Translates to: PELGAEWARAEGCGV*QAGSHCEQGRADGR
Trigger: CCGCCCATCCGCCCTTCCCTGCTCACAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS-3UTR CAA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS TCA 90 bp TGGGGGCTTCCGGGGCCAGCCCAGTCCACGCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCTGCACTTCGGGCACTGGAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: WGLPGPAQSTLRARH*ARAGRAALRALESS
Trigger: CGAGGACTCCAGTGCCCGAAGTGCAGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAGCGTGGACTGGGCTGGCCCCGGAAGCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
ENST00000561524.5
ENST00000562311.5
ENST00000562503.5
ENST00000562984.5
ENST00000563028.1
ENST00000564891.1
ENST00000565481.5
ENST00000565684.5
ENST00000566648.5
ENST00000566914.1
ENST00000566975.5
ENST00000567059.5
ENST00000569112.5
CDS TCA 90 bp CCTCTTTTCCAGACAGGGGCGCAGGGAAGGAGCGCCCGGCGAGACTaGCGCTCCGGCTCCACGCCCGCCTGGCTCTGGGCTGTCGGTTAC +
Preference number: 5 (lower is better)
Translates to: PLFQTGAQGRSARRD*RSGSTPAWLWAVGY
Trigger: GTAACCGACAGCCCAGAGCCAGGCGGGCGTGGAGCCGGAGCGTCAGTCTCGCCGGGCGCTCCTTCCCTGCGCCCCTGTCTGGAAAAGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000565871.1
CDS CCA 90 bp TCTGCAGCCCCAGCCGTCAGGCCGAGGGCTGCAGCTTCCTCCGGATaGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SAAPAVRPRAAASSG*IQGGYWSQSWGLSG
Trigger: CCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGGCCTGACGGCTGGGGCTGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AINTARPRGGRPCASAHPSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCTCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPSLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS TCA 90 bp TCGGCCAGCCCGCTCGCGCCCCTCCCGCACACTTTCCACAGGAAATaGTTAACTCGGGCCGCGGCGCGTTCCCATGGCAACCGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SASPLAPLPHTFHRK*LTRAAARSHGNRLR
Trigger: TCGGAGCCGGTTGCCATGGGAACGCGCCGCGGCCCGAGTTAATCATTTCCTGTGGAAAGTGTGCGGGAGGGGCGCGAGCGGGCTGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379655.8
CDS GCA 90 bp GAGCTGGGCGCTCTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTCTTGCAGCTCGGCCTCACAGCGCCG +
Preference number: 5 (lower is better)
Translates to: ELGALLAVLTTWAGT*WLCAQLLQLGLTAP
Trigger: CGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 90 bp CCAGCCTCCCCAGGTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTaGTGGTCACTGTCGCGGAGGGCCAGCCTCTCCTGTAGGACCACC +
Preference number: 5 (lower is better)
Translates to: PASPGTWFCSWVDVA*WSLSRRASLSCRTT
Trigger: GGTGGTCCTACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGGGGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CCA 90 bp GCCTCCCCAGGTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTGCTaGTCACTGTCGCGGAGGGCCAGCCTCTCCTGTAGGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: ASPGTWFCSWVDVAC*SLSRRASLSCRTTS
Trigger: GCTGGTGGTCCTACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CCA 90 bp CTCTGCCCATCCCAGCCTCCCCAGGTACCTGGTTCTGCAGCTGGGTaGACGTGGCCTGCTGGTCACTGTCGCGGAGGGCCAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LCPSQPPQVPGSAAG*TWPAGHCRGGPASP
Trigger: AGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGGGGAGGCTGGGATGGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CCA 90 bp CCAGGACAGCATGGACGTCAATCCAGGGCTGAGGACGGACCAGGCTaGGGCTGTGCGACACTCCTCCCGGGCCCAGGCTCCTCATCAGCC +
Preference number: 5 (lower is better)
Translates to: PGQHGRQSRAEDGPG*GCATLLPGPGSSSA
Trigger: GGCTGATGAGGAGCCTGGGCCCGGGAGGAGTGTCGCACAGCCCCAGCCTGGTCCGTCCTCAGCCCTGGATTGACGTCCATGCTGTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCATCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSASLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCATGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASSKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TTGCGGAAGGGCACGTGGCCCTGGCGGGAGCGCAGGGCAGCAATGACGTCCCCCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LRKGTWPWRERRAAMTSPVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: GRAATPAFPPMQFALRATPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCAGGCAGCCGTGTCCTaGCACGCGCTGGCGCACATG +
Preference number: 5 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHQAAVS*HALAHM
Trigger: CATGTGCGCCAGCGCGTGCAAGGACACGGCTGCCTG...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541240.5
CDS GCA 90 bp GGCCCAGGCTCCTCATCAGCCAGAGCAACTGAATCACGGGCCTGCTaGAGGGGGCGTCACCCTGCCTGCTCAAGGGGAAGAGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GPGSSSARATESRAC*RGRHPACSRGRGSW
Trigger: CCAGCTCCCTCTTCCCCTTGAGCAGGCAGGGTGACGCCCCCTGCAGCAGGCCCGTGATTCAGTTGCTCTGGCTGATGAGGAGCCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp CTGGGCGCTCTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTGCAGCTCGGCCTCACAGCGCCGCAT +
Preference number: 5 (lower is better)
Translates to: LGALLAVLTTWAGTC*LCAQLLQLGLTAPH
Trigger: ATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS CCA 90 bp CCATCCCAGCCTCCCCAGGTACCTGGTTCTGCAGCTGGGTGGACGTaGCCTGCTGGTCACTGTCGCGGAGGGCCAGCCTCTCCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: PSQPPQVPGSAAGWT*PAGHCRGGPASPVG
Trigger: TCCTACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGGGGAGGCTGGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CCA 90 bp CTGGCACCACGAGCACTCTGGCCAAGGCACCAGTGGCCTGCTCCGTaGCAGGTGGTTGGCCAGCTCTACTGGGGGCTAGGTCTCGGGCTT +
Preference number: 5 (lower is better)
Translates to: LAPRALWPRHQWPAP*QVVGQLYWGLGLGL
Trigger: AAGCCCGAGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCTCGTGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp CCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PAINTARPRGGRPCASAHRDLLA*CAALAA
Trigger: AGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCT...GTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LPAINTARPRGGRPCASARSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAARSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCATCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LPAINTARPRGGRPCASASKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAARADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CGAGCCAGGCAGGTGAGCGAGCAGCAGAATCCCCCACCCGCTGGCTGCCTCTGCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RARQVSEQQNPPPAGCLCRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp GCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: AINTARPRGGRPCASAHPFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCACAGGGAGAGTGGGGTTaGCCAGTGTTTGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAQGEWG*PVFAGG
Trigger: ACCCCCAGCAAACACTGGCAAACCCCACTCTCCCTG...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS GCA 90 bp TCTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTGCTGGCTTTGTaGGCAGCTCTTGCAGCTCGGCCTCACAGCGCCGCATCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPGCAHNLGRDLLAL*AALAARPHSAASPA
Trigger: GGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 90 bp TCGATGGCCTGGCCTATCTCGGCCTTGACACTCCTGAGGGCCTCCTaGAGCAGCAGTGGGAAGCCGCGCACCTGCCGCTTGAGCCCATTG +
Preference number: 5 (lower is better)
Translates to: SMAWPISALTLLRAS*SSSGKPRTCRLSPL
Trigger: CAATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp CAGCAGACTGGCACCACGAGCACTCTGGCCAAGGCACCAGTGGCCTaGTCCGTGGCAGGTGGTTGGCCAGCTCTACTGGGGGCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: QQTGTTSTLAKAPVA*SVAGGWPALLGARS
Trigger: AGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCTCGTGGTGCCAGTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp GGGCTCGGCACTGAGCTAGGGCTGGGCGAGCTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGACTGGGGTATCTTTTCCACGCCCAG +
Preference number: 5 (lower is better)
Translates to: GLGTELGLGELHFGH*SPRHRRLGYLFHAQ
Trigger: CTGGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
ENST00000562503.5
ENST00000563028.1
ENST00000564891.1
ENST00000565684.5
ENST00000566648.5
ENST00000566914.1
ENST00000567059.5
CDS CCA 90 bp CTACATTCATGGTGCCACCAGCTTCCCGGGCCTCCCGGGCCCGCCTaGGGGCCGGCGCCTGTCTCTTCCAAAGCTTCTCTTCTTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LHSWCHQLPGPPGPA*GPAPVSSKASLLSS
Trigger: GGACGAAAGAAGAGAAGCTTTGGAAGAGACAGGCGCCGGCCCCCAGGCGGGCCCGGGAGGCCCGGGAAGCTGGTGGCACCATGAATGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465878.6
ENST00000562311.5
CDS CCA 90 bp CTGGGACATGGCCTCCACCATCCTAAGCACCATGGGGGCCGCACCTaGTGGCCCCGACAAGCTCGAGCACCTCCTGCTGCCAAAGAGACG +
Preference number: 5 (lower is better)
Translates to: LGHGLHHPKHHGGRT*WPRQARAPPAAKET
Trigger: CGTCTCTTTGGCAGCAGGAGGTGCTCGAGCTTGTCGGGGCCACCAGGTGCGGCCCCCATGGTGCTTAGGATGGTGGAGGCCATGTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS CCA 90 bp AGACGCAGCAGACTGGCACCACGAGCACTCTGGCCAAGGCACCAGTaGCCTGCTCCGTGGCAGGTGGTTGGCCAGCTCTACTGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: RRSRLAPRALWPRHQ*PAPWQVVGQLYWGL
Trigger: TAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCTCGTGGTGCCAGTCTGCTGCGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAASWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCATCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSASWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGRSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTAAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCACCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCACTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSALDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CAA 90 bp GTGGTGCGGAGGCCTGTGCTGCAGTCCACGCCTCGCACCGTCACGATGAGCAGCCGCCTCCACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VVRRPVLQSTPRTVTMSSRLHTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCG...GCTGCTCATCGTGACGGTGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS TCA 90 bp GCTAGCCCACACGCTCTTGGCCAAGGACGGCAGCCCGCAGAGCTCTaGCCAGCTTGGCCAGAGGGAATGCAGCTGATTCCCCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ASPHALGQGRQPAEL*PAWPEGMQLIPPAL
Trigger: CAGAGCAGGGGGAATCAGCTGCATTCCCTCTGGCCAAGCTGGTCAGAGCTCTGCGGGCTGCCGTCCTTGGCCAAGAGCGTGTGGGCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421376.6
ENST00000565871.1
ENST00000566975.5
CDS GCA 90 bp TGCTCACAACCTGGGCAGGGACCTGCTGGCTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGCCGCATCTCCTGCCTCAGTCGCTCA +
Preference number: 5 (lower is better)
Translates to: CSQPGQGPAGFVRSS*SSASQRRISCLSRS
Trigger: TGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 90 bp ATCTGCGCCCGGAGCCGCGCGGTCAGCTGGTGTGAGCTCTGCAGCTaGTGTTCCATCTCCTTCAGCACCTGCCTCTGCATAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: ICARSRAVSWCELCS*CSISFSTCLCIATC
Trigger: GCAGGTGGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHRDLLA*CAALAA
Trigger: AGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCT...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRRDLLA*CAALAA
Trigger: AGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCT...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFRDLLA*CAALAA
Trigger: AGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSAVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGTCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPSLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTATCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: FRPSGVTSVTQAVAATSLSLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...TAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGSWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSRSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAACGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCATCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: ATPAFPPMQFALRATAERADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CAA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCATCTTTTCCACGCCCTaGTTTACCAGCCTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASIFSTP*FTSLGR
Trigger: TCTGCCCAGGCTGGTAAACAAGGGCGTGGAAAAGAT...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000465878.6
CDS TCA 90 bp CTCGTACATGGCAATCTGCGCCCGGAGCCGCGCGGTCAGCTGGTGTaGGCTCTGCAGCTGCTGTTCCATCTCCTTCAGCACCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LVHGNLRPEPRGQLV*ALQLLFHLLQHLPL
Trigger: CAGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTACGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp TGTTCCATCTCCTTCAGCACCTGCCTCTGCATAGCCACCTGCTCCTaGAGGTGCTGGTTCCGGGCCTGGGACTCGCTGAGGGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CSISFSTCLCIATCS*RCWFRAWDSLRACL
Trigger: CAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp ATGGCAATCTGCGCCCGGAGCCGCGCGGTCAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCCTTCAGCACCTGCCTCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: MAICARSRAVSWCEL*SCCSISFSTCLCIA
Trigger: GGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp TACTCCCAGTCAGACGCCTTCTCCTGCACCTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATACCTGGGTTCTCAGCGGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: YSQSDAFSCTSEKSS*RARWLIPGFSAVPS
Trigger: GGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGACTGGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565270.1
CDS GCA 90 bp TCCTTCAGGTGTTCTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTaGTGGTCACTGTCGCGGAGGGCCAGCCTCTCCTGTAGGACCACC +
Preference number: 5 (lower is better)
Translates to: SFRCSTWFCSWVDVA*WSLSRRASLSCRTT
Trigger: GGTGGTCCTACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTAGAACACCTGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS GCA 90 bp CAAGGGCCGTCCATGTCTCTAAGCCCAACAGGGGAGGGTCCCGAGTaGCACCCTGGGCCCGATACATACTTGTGGCCACAAAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QGPSMSLSPTGEGPE*HPGPDTYLWPQRGS
Trigger: GCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGTTGGGCTTAGAGACATGGACGGCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp GCCTATCTCGGCCTTGACACTCCTGAGGGCCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCGCTTGAGCCCATTGTAGTCGTTGGT +
Preference number: 5 (lower is better)
Translates to: AYLGLDTPEGLLQQQ*EAAHLPLEPIVVVG
Trigger: ACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp TTCAGGTGTTCTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTGCTaGTCACTGTCGCGGAGGGCCAGCCTCTCCTGTAGGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: FRCSTWFCSWVDVAC*SLSRRASLSCRTTS
Trigger: GCTGGTGGTCCTACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTAGAACACCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS CCA 90 bp GGCTCTCCCAGGCTGAAGCTGCTGAGCTGGGAAGGCCAGAGGGTCTaGGATCCAGACAACCTCAAGGAAACTCAGCCCAGAGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: GSPRLKLLSWEGQRV*DPDNLKETQPRGQR
Trigger: CCGCTGGCCTCTGGGCTGAGTTTCCTTGAGGTTGTCTGGATCCCAGACCCTCTGGCCTTCCCAGCTCAGCAGCTTCAGCCTGGGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp ACAGGGGAGGGTCCCGAGTGCCACCCTGGGCCCGATACATACTTGTaGCCACAAAGGGGCAGCAGGCACATGCCTGAGCCCAAGACACAG +
Preference number: 5 (lower is better)
Translates to: TGEGPECHPGPDTYL*PQRGSRHMPEPKTQ
Trigger: CTGTGTCTTGGGCTCAGGCATGTGCCTGCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp AGCACTCTGGCCAAGGCACCAGTGGCCTGCTCCGTGGCAGGTGGTTaGCCAGCTCTACTGGGGGCTAGGTCTCGGGCTTGTAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: STLAKAPVACSVAGG*PALLGARSRACRED
Trigger: ATCTTCCCTACAAGCCCGAGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp ACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: THPSPHGSWVCPEAPRPPVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...GGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RAAIGATNPPQSPWFLGLWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...CAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RAATPAFPPMQFALRATAWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRSWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: PSFRPSGVTSVTQAVAATCGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...AGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LPGRAATPAFPPMQFALRADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSATTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ATPAFPPMQFALRATAERQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PARKSSHPRLSAHAICTQQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCAGAGCTCTGACCAGCTaGGCCAGAGGGAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRRALTS*ARGNAA
Trigger: AGCTGCATTCCCTCTGGCCAAGCTGGTCAGAGCTCT...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS CCA 90 bp TCTGACTCGTACATGGCAATCTGCGCCCGGAGCCGCGCGGTCAGCTaGTGTGAGCTCTGCAGCTGCTGTTCCATCTCCTTCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SDSYMAICARSRAVS*CELCSCCSISFSTC
Trigger: GCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTACGAGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp TTCTTACGCAGCTGCAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTaGTTGTTGCTGTTGACCTCCTCGATGGCCTGGCCTATCTCGGCC +
Preference number: 5 (lower is better)
Translates to: FLRSCSSRRYLRSSS*LLLLTSSMAWPISA
Trigger: GGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp TCCTGTAGGACCACCAGCTCCTCCTGTAGCTGGGTCTTCTCGTCCTaGAGCTGGGACATGGCCTCCACCATCCTAAGCACCATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SCRTTSSSCSWVFSS*SWDMASTILSTMGA
Trigger: GGCCCCCATGGTGCTTAGGATGGTGGAGGCCATGTCCCAGCTCCAGGACGAGAAGACCCAGCTACAGGAGGAGCTGGTGGTCCTACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS CCA 90 bp GCTCTGCCGCCACCTGCACAAACACATTCCTTCCTAGCAACACGCTaGGCCACGGGCCAGGCAGGGAGGCAGAGCTTGTGCCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALPPPAQTHSFLATR*ATGQAGRQSLCHFS
Trigger: AGAGAAGTGGCACAAGCTCTGCCTCCCTGCCTGGCCCGTGGCCCAGCGTGTTGCTAGGAAGGAATGTGTTTGTGCAGGTGGCGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564204.1
CDS CCA 90 bp AGGCACCAGTGGCCTGCTCCGTGGCAGGTGGTTGGCCAGCTCTACTaGGGGCTAGGTCTCGGGCTTGTAGGGAAGATGTCTGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: RHQWPAPWQVVGQLY*GLGLGLVGKMSAFS
Trigger: GGAGAAAGCAGACATCTTCCCTACAAGCCCGAGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: ATPAFPPMQFALRATAERRDLLA*CAALAA
Trigger: AGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCT...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSSARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: LPGRAATPAFPPMQFALRSLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: AAIGATNPPQSPWFLGLPCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...GGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RAATPAFPPMQFALRATARSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSASRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PPTHPSPHGSWVCPEAPRSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...GCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TCTGCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SAQRLLAHPLRRGLASSANSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...TGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp GAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCTGAGGAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: EAPRPPPKEGAGQLCKLRNSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...CCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAANSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: PPHGAQFADGPGLPGRAAPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...GGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: GCHWCHQPTPVPMVLGSALCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp GAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: EQPPPPFRPCNLHSEPQPLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCACACCCACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SHKHSTAPWREAMRLRTPTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...GGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS TCA 90 bp GGCAGCCCGCAGAGCTCTGACCAGCTTGGCCAGAGGGAATGCAGCTaGTTCCCCCTGCTCTGTGCCCGACCCGTGTTAAAGTTTAACCCG +
Preference number: 5 (lower is better)
Translates to: GSPQSSDQLGQRECS*FPLLCARPVLKFNP
Trigger: CGGGTTAAACTTTAACACGGGTCGGGCACAGAGCAGGGGGAATCAGCTGCATTCCCTCTGGCCAAGCTGGTCAGAGCTCTGCGGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421376.6
ENST00000565871.1
ENST00000566975.5
CDS CCA 90 bp CCTCGGGGCACCAGGCAGCCTGTGGCCTCCCGGCTGCCTCCAACCTaGACACAGGGCTTTGCAGTCTTTCTAAATGAGAATCCTGATGGC +
Preference number: 5 (lower is better)
Translates to: PRGTRQPVASRLPPT*TQGFAVFLNENPDG
Trigger: GCCATCAGGATTCTCATTTAGAAAGACTGCAAAGCCCTGTGTCCAGGTTGGAGGCAGCCGGGAGGCCACAGGCTGCCTGGTGCCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565684.5
CDS CCA 90 bp GTCCATGTCTCTAAGCCCAACAGGGGAGGGTCCCGAGTGCCACCCTaGGCCCGATACATACTTGTGGCCACAAAGGGGCAGCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: VHVSKPNRGGSRVPP*ARYILVATKGQQAH
Trigger: ATGTGCCTGCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGTTGGGCTTAGAGACATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHSARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: PARKSSHPRLSAHAICTQCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: GRAATPAFPPMQFALRATPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: PARKSSHPRLSAHAICTQDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGAGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: ATPAFPPMQFALRATAERDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCCAGAGGCTCCTCGCCCACCCCCTAAGGAGGGGGCTGGCCAGCTCTGCAAGCGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: AQRLLAHPLRRGLASSASAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...GCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTGGGCGAGGAGCCTCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CTCCTCACGGGGCCCAGTTCGCTGATGGCCCAGGCCTGCCAGGAAGAGCAGCCAAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLTGPSSLMAQACQEEQPNSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: RAATPAFPPMQFALRATALCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCCCCTCGGCCCCCGACTaGCCCACGCGCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAPSAPD*PTRSEP
Trigger: TGGCTCGGAGCGCGTGGGCAAGTCGGGGGCCGAGGG...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: QPTPVPMVLGSAQRLLAHTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GTGAGGGCCCAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: VRAQLQAQRGHIRHTGSGTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...GCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCCCACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLEGEGRGGLPLVPPTHPTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...GGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000565397.1
CDS-3UTR CAA 90 bp GCTGCAGCTTCCTCCGGATGGATCCAGGGCGGCTACTGGTCCCAGAGCTGGGGGACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: AAASSGWIQGGYWSQSWGTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...CCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp GCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: ARKSSHPRLSAHAICTQSFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...GCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTAGCCCACACGCTCTaGGCCAAGGACGGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLAHTL*AKDGSP
Trigger: CGGGCTGCCGTCCTTGGCCAAGAGCGTGTGGGCTAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421376.6
CDS-3UTR CAA 90 bp GCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGTTCAGGTGTTCTACCTaGATCATCTCCACTGCCGCC +
Preference number: 5 (lower is better)
Translates to: ATNPPQSPWFLGLPRGSSFRCST*IISTAA
Trigger: GGCGGCAGTGGAGATGATCAAGGTAGAACACCTGAA...CGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS TCA 90 bp AGAGCAGTGTGGCTGTGGTCAGGGGCTCCCGCCTCCACACCTTGTTaGTGTCGTCCACGCTCTGCACTTGGAACTCAGTCAGCCCTGGTA +
Preference number: 5 (lower is better)
Translates to: RAVWLWSGAPASTPC*CRPRSALGTQSALV
Trigger: TACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGAGCCCCTGACCACAGCCACACTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS GCA 90 bp TCCTTGAGTCGCAGCTCCACCTCAGCCAGCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCTGACAGCATGCCTTTGCTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: SLSRSSTSASRSVFC*TSRFSSDSMPLLSA
Trigger: GGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGACTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562503.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS GCA 90 bp TTCCCTTTCAGCCGCACGAGCTCATTGTGGCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FPFSRTSSLWHFLRS*SSRRYLRSSSWLLL
Trigger: CAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGAAAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp GTCAGGGGCTCCCGCCTCCACACCTTGTTGATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: VRGSRLHTLLMSSTL*TWNSVSPGTYSCPL
Trigger: CAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGAGCCCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS GCA 90 bp GTGGAGGGTGACCTAACAGAAGAGGGCTTGCGGCAGACACTGGAATaGGATGTTCTGCTGGGAAACCCAGCCACCTGGGCGGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: VEGDLTEEGLRQTLE*DVLLGNPATWAEMP
Trigger: AGGCATCTCCGCCCAGGTGGCTGGGTTTCCCAGCAGAACATCGCATTCCAGTGTCTGCCGCAAGCCCTCTTCTGTTAGGTCACCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565684.5
CDS GCA 90 bp GTCTCCTTACACTGCCCCCTTCCCACAGACCTTCCATTTCCCACCTaGAGAACGGACACAGCACTGTCTGCCCTGACTACTGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VSLHCPLPTDLPFPT*RTDTALSALTTAWG
Trigger: CCCCCAGGCAGTAGTCAGGGCAGACAGTGCTGTGTCCGTTCTGCAGGTGGGAAATGGAAGGTCTGTGGGAAGGGGGCAGTGTAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS CCA 90 bp GCACAGCCTTCATCTCCACCTGGGCTCTGGCAAAGGCCTCCTCAATaGCCCGGTTCTTGTCCTCTTCCAGGGACTGCATCTCCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: AQPSSPPGLWQRPPQ*PGSCPLPGTASPPA
Trigger: TGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp GTCCGGACGCCTGCTAGATTCTCGTGCACAGCCTTCATCTCCACCTaGGCTCTGGCAAAGGCCTCCTCAATGGCCCGGTTCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: VRTPARFSCTAFIST*ALAKASSMARFLSS
Trigger: AGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp GGCTCCCGCCTCCACACCTTGTTGATGTCGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: GSRLHTLLMSSTLCT*NSVSPGTYSCPLPS
Trigger: AGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PARKSSHPRLSAHAICTQVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...CTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCCTCCTTGAAGGAGAGGGGCGGGGAGGGCTGCCATTGGTGCCACCAACCCACCTCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: PSLKERGGEGCHWCHQPTSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...GGTGGGTTGGTGGCACCAATGGCAGCCCTCCCCGCCCCTCTCCTTCAAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCAAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGATCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: ATPAFPPMQFALRATAERSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...TCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGATGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRCGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGCCAGCCATAAACACAGCACGGCCCCGTGGCGGGAGGCCATGCGCCTCCGCAGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: LPAINTARPRGGRPCASAAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...TGCGGAGGCGCATGGCCTCCCGCCACGGGGCCGTGCTGTGTTTATGGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp CCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: PTPVPMVLGSAQRLLAHPAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...GGGGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp AACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCTCGCCCACCCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: NPPQSPWFLGLPRGSSPTPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...GGTGGGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGACTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: LPGRAATPAFPPMQFALRLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAGCTTCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTGGCCGCGACTTCACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: QLQAQRGHIRHTGSGRDFTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...GAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 90 bp CAGTCCTTGAGTCGCAGCTCCACCTCAGCCAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGCTCTGACAGCATGCCTTTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: QSLSRSSTSASRSVF*CTSRFSSDSMPLLS
Trigger: GGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGACTCAAGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562503.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS CCA 90 bp CCCGCTCAGTGCCTGATGAGAGGACGGCTCAAGTCCTTTGGCCCCTaGGTGGGAGTAGGGACAGTTTGCATGAGGCAGCCTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: PAQCLMRGRLKSFGP*VGVGTVCMRQPFCF
Trigger: AAAGCAGAAAGGCTGCCTCATGCAAACTGTCCCTACTCCCACCCAGGGGCCAAAGGACTTGAGCCGTCCTCTCATCAGGCACTGAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564204.1
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFSLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGCTGAGGGCCTGCTaGGTCTTGGACGACTCCACC +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASLRAC*VLDDST
Trigger: GGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LSAHAICTQSHSRETPFPWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: GRAATPAFPPMQFALRATSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSRSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FPPMQFALRATAERHRFLSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AAACTTGAGGGAATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KLEGIERLASVLLHGGHLSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...CAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTATCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: APTLDAPGLTRTQALPCVSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGATGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: LPGRAATPAFPPMQFALRCGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCCATCGTGTACGTCTaGCCGGCGCCCGTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSIVYV*PAPVWP
Trigger: CGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GGGAGGGCTGCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: GRAAIGATNPPQSPWFLGPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...ACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: RAATPAFPPMQFALRATATTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: IGATNPPQSPWFLGLPRGTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000565397.1
CDS-3UTR CAA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCAGTCCCCATGGTTCTaGGGTCTGCCCAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SAHAICTQSHSRETPFPSQSPWF*GLPRGS
Trigger: GGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTG...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS TCA 90 bp TGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCATCGAAAGTCACAGCATTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: CPARRTQACPCAAGG*WSRRRHRKSQHWWP
Trigger: AGGCCACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS TCA 90 bp TCCTTACCTCCCACCAAGCCCAGTCAACGATCATCAGCTGTCTGCTaGGGAAAAGCGGGCTCTCCCAGGCTGAAGCTGCTGAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SLPPTKPSQRSSAVC*GKAGSPRLKLLSWE
Trigger: TTCCCAGCTCAGCAGCTTCAGCCTGGGAGAGCCCGCTTTTCCTCAGCAGACAGCTGATGATCGTTGACTGGGCTTGGTGGGAGGTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS GCA 90 bp GGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTaGAGCAGGTGGATGATGGAGTCGTCGTCGGCATCGAAAGTCACA +
Preference number: 5 (lower is better)
Translates to: GEKTLSSSKDTGLPL*SRWMMESSSASKVT
Trigger: TGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CCA 90 bp GCCGATCAGAAGCCAGTGGTGGATAGGGCTGGAAACACGGCACCATaGAAAACAAGGCAGAGTGTACCCCCTGGCGGGCTTTGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: ADQKPVVDRAGNTAP*KTRQSVPPGGLCLE
Trigger: CTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGCCTTGTTTTCCATGGTGCCGTGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 90 bp CCACCTGCATTTACACTTCACAGGCAGAAGCGGCTCGACCAAGGGTaGGGCCAGCCAGCCCAGGTCTTTGTGTTTTCTCAGCTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PPAFTLHRQKRLDQG*GQPAQVFVFSQLSA
Trigger: AGCAGACAGCTGAGAAAACACAAAGACCTGGGCTGGCTGGCCCCACCCTTGGTCGAGCCGCTTCTGCCTGTGAAGTGTAAATGCAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPSARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFRSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLARSSSW*LLLTSS
Trigger: CGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCG...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGA +
Preference number: 5 (lower is better)
Translates to: SAHAICTQSHSRETPFPSPSPSS*VTGRTR
Trigger: TCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGG...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLASKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFSKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LSAHAICTQSHSRETPFPVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCATTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AIGATNPPQSPWFLGLPRNSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...TCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLIADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLARADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACACCACCATGAGGGTCTaGCTGTCACCACTAAGCGAA +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHTTMRV*LSPLSE
Trigger: TTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp AGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATCTTTTCCACGCCCTaGTTTACCAGCCTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RKSSHPRLSAHAICTQSHIFSTP*FTSLGR
Trigger: TCTGCCCAGGCTGGTAAACAAGGGCGTGGAAAAGAT...GTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000465878.6
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGGGGCCACACAGCCTaGCAGGAACAGCAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFWGHTA*QEQQCE
Trigger: CTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCCA...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS-3UTR CAA 90 bp ATAGAGCGTCTCGCTAGTGTTCTTCTCCACGGGGGACACCTGTACCACCATGAGTGGGGCCACACAGCCTaGCAGGAACAGCAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: IERLASVLLHGGHLYHHEWGHTA*QEQQCE
Trigger: CTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCCA...CTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp TGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACAGCAGAGCCTACTCCCGCCTCCACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: CGQTQTPKGACLGHSRAYSRLHT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGA...GTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS TCA 90 bp AAGTCACAGCATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAATCACTCGGATGTTCCCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KSQHWWPQVLPHPLW*LAGHEQSLGCSLSA
Trigger: GGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS TCA 90 bp AAGTCACAGCATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAATCACTCGGATGTTCCCTGGATTGG +
Preference number: 5 (lower is better)
Translates to: KSQHWWPQVLPHPLW*LAGHEQSLGCSLDW
Trigger: CCAATCCAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS TCA 90 bp TATCTTTTCCACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCGGCCTGGCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: YLFHALTALTGLRNR*ETSVSSLVSAWRRQ
Trigger: CTGCCTCCGCCAGGCCGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTGGAAAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562311.5
ENST00000569112.5
CDS GCA 90 bp TCTGCACTTGGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGATCTCCAGTTTTTCCTGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SALGTQSALVHTAAH*RLGTAGSPVFPEAL
Trigger: AAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565270.1
CDS CCA 90 bp ACCTTGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCGGCATCGAAAGTCACAGCATTGGTG +
Preference number: 5 (lower is better)
Translates to: TLSSSKDTGLPLCSR*MMESSSASKVTALV
Trigger: CACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CCA 90 bp CTCTTTGGTGACTGGCCGGACACGAGCAATCACTCGGATGTTCCCTaGATTGGTTGGGGATGGGGAAATGGGTCCAGGCCATGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: LFGDWPDTSNHSDVP*IGWGWGNGSRPCQD
Trigger: GTCTTGACATGGCCTGGACCCATTTCCCCATCCCCAACCAATCCAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS CCA 90 bp AGGTCCCGGTGCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTTGATCATCTCC +
Preference number: 5 (lower is better)
Translates to: RSRCSSDRSRLTSWA*LMSFSFRCSTLIIS
Trigger: GGAGATGATCAAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGCACCGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569222.5
CDS CCA 90 bp ATCAGCAGGTCCCGGTGCAGCTCAGATCGCAGTCGGCTCACTTCCTaGGCCTGGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTTGATC +
Preference number: 5 (lower is better)
Translates to: ISRSRCSSDRSRLTS*AWLMSFSFRCSTLI
Trigger: GATCAAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGCACCGGGACCTGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569222.5
CDS CCA 90 bp CTTGTGGATGAGGTTGGTAAGCAGAGACAGAAAGGGTGGTGGGGCTaGAGCGTGCTAAAGGATGGTCACCTCCACCAAAGGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LVDEVGKQRQKGWWG*SVLKDGHLHQRQEL
Trigger: CAGCTCCTGCCTTTGGTGGAGGTGACCATCCTTTAGCACGCTCCAGCCCCACCACCCTTTCTGTCTCTGCTTACCAACCTCATCCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp AGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGATCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: SSHPRLSAHAICTQSHSRSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...TCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LSAHAICTQSHSRETPFPSWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRASSRRY*RSSSWL
Trigger: CAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: SAHAICTQSHSRETPFPSDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: LSAHAICTQSHSRETPFPDTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FPPMQFALRATAERHRFLSKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFLCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FRPCNLHSEPQPRDTVSFLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...GAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTGCCAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LPGRAATPAFPPMQFALRTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...TCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: LSAHAICTQSHSRETPFPFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...AGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTTTCCGCCCATGCAATTaGCACTCAGAGCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: SAHAICTQSHSRETPFPSFRPCN*HSEPQP
Trigger: CGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAA...AGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS GCA 90 bp CCAGCTCTACTGGGGGCTAGGTCTCGGGCTTGTAGGGAAGATGTCTaGTTTCTCCTGCACTTGAAGGCAGGCAATCTCTCAGAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: PALLGARSRACREDV*FLLHLKAGNLSELG
Trigger: CCCTAACTCTGAGAGATTGCCTGCCTTCAAGTGCAGGAGAAAGCAGACATCTTCCCTACAAGCCCGAGACCTAGCCCCCAGTAGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 90 bp GAGCAATCACTCGGATGTTCCCTGGATTGGTTGGGGATGGGGAAATaGGTCCAGGCCATGTCAAGACCAGTCTCCATTCTGGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: EQSLGCSLDWLGMGK*VQAMSRPVSILVHW
Trigger: CCAGTGGACCAGAATGGAGACTGGTCTTGACATGGCCTGGACCCATTTCCCCATCCCCAACCAATCCAGGGAACATCCGAGTGATTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLISARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTCAGCCAGGCAGTCCTaGAGTCGCAGCTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSARQS*SRSSTS
Trigger: TGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACATCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: GRAATPAFPPMQFALRATSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CAGGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCATCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: QEEQPPPPFRPCNLHSEPSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...TGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTATCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: APTLDAPGLTRTQALPCVSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGGCCTATCTCGGCCTaGACACTCCTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRAWPISA*TLLRAS
Trigger: GGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FPPMQFALRATAERHRFLSWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSKDTG*PLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLACGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTGGTGCCACCAACCCACCCCAGTCCCCATGGTTCTTGGGTCTGCCCAGAGGCTGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: LVPPTHPSPHGSWVCPEAAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...AGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
CDS-3UTR CAA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGCCGACAGCGACTTGTaGATGTGCTGCGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLADSDL*MCCASR
Trigger: GCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCAGAGCCGACAGCGACTaGTTGATGTGCTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLIRADSD*LMCCAS
Trigger: GGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GTCGTGCGATTAGTGTGGCCAAACTCAAACACCCAAGGGTGCGTGCTTAGGACACTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VVRLVWPNSNTQGCVLRTLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...TGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCACACTAATCGCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTGGGGCCACACAGCCTaGCAGGAACAGCAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRWGHTA*QEQQCE
Trigger: CTCACACTGCTGTTCCTGCAAGGCTGTGTGGCCCCA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543930.5
ENST00000562903.5
CDS TCA 90 bp TGGCAGAAGGAGGAGGAGACACAAAGCATGTCTTTTGAGGTCACCTaGCCAGTAAGTGGTGGACCTAGGACCGGAACTCGCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WQKEEETQSMSFEVT*PVSGGPRTGTRIWL
Trigger: CAGCCAGATGCGAGTTCCGGTCCTAGGTCCACCACTTACTGGTCAGGTGACCTCAAAAGACATGCTTTGTGTCTCCTCCTCCTTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS CCA 90 bp TGGCCAAACTCAAACACCTTGTTGATGTCGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTGCCGTCT +
Preference number: 5 (lower is better)
Translates to: WPNSNTLLMSSTLCT*NSVSPGTYSCPLPS
Trigger: AGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS CCA 90 bp TGCAGGAACAGCAGTGTGAGAAAGCAGCCGATCAGAAGCCAGTGGTaGATAGGGCTGGAAACACGGCACCATGGAAAACAAGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: CRNSSVRKQPIRSQW*IGLETRHHGKQGRV
Trigger: CACTCTGCCTTGTTTTCCATGGTGCCGTGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 90 bp CCTTGCAGGAACAGCAGTGTGAGAAAGCAGCCGATCAGAAGCCAGTaGTGGATAGGGCTGGAAACACGGCACCATGGAAAACAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PCRNSSVRKQPIRSQ*WIGLETRHHGKQGR
Trigger: TCTGCCTTGTTTTCCATGGTGCCGTGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 90 bp AGGAAGAATGCTGAATGCATGAGGGGCCAGCCAGAGCAGAACTTGTaGATGAGGTTGGTAAGCAGAGACAGAAAGGGTGGTGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RKNAECMRGQPEQNL*MRLVSRDRKGGGAG
Trigger: TCCAGCCCCACCACCCTTTCTGTCTCTGCTTACCAACCTCATCCACAAGTTCTGCTCTGGCTGGCCCCTCATGCATTCAGCATTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS-3UTR CAA 90 bp TTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTGTCTTGATGACATACTaGACAGGTGGGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: FPPMQFALRATAERHRFLVLMTY*TGGDWA
Trigger: GGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGAC...AAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRARACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRCKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLISWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TGCTCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTGGCCAAACTCAAACTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSFRLVNSVVRLVWPNSNSWLLL*TSSMAW
Trigger: CCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGA...GTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGC +
Preference number: 5 (lower is better)
Translates to: IGFQREENSRDQRARQVSSRTSS*WHFLRS
Trigger: GCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSCGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GGAAGAGCAGCCACCCCCGCCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: GRAATPAFPPMQFALRATAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...TGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGGTGGCTGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCTCCCACTCTAGATGCTCCTGGCTTGACCAGGACCCAAGCTCTGCCCTGCGTAGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: APTLDAPGLTRTQALPCVAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...TACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCTGTGCTCGTTCAGGTaGGTGAACTCGGTCGTGCGA +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLILCSFR*VNSVVR
Trigger: TCGCACGACCGAGTTCACCAACCTGAACGAGCACAG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTAGATGCTCCTGGCTaGACCAGGACCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTLDAPG*TRTQAL
Trigger: CAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAG...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS TCA 90 bp TATCTTTTCCACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATACTTCTCACGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: YLFHALTALTGLRNR*ETSVSSLVYFSRGL
Trigger: GAGCCCGCGTGAGAAGTATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTGGAAAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565481.5
CDS CCA 90 bp GGCTGGAAACACGGCACCATGGAAAACAAGGCAGAGTGTACCCCCTaGCGGGCTTTGCTTAGAGAGGCAAAGTTCAGAATTCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GWKHGTMENKAECTP*RALLREAKFRIPGK
Trigger: CTTTCCTGGAATTCTGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGCCTTGTTTTCCATGGTGCCGTGTTTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLRACLV*DDSTST
Trigger: AGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCT...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRACKVSK*VRTPAR
Trigger: TCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLISSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATG +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSSSWL*LLTSSM
Trigger: CATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCT...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: IGFQREENSRDQRARQVSSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCGAAAGTCACAGCATaGGTGGCCTCAGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSKVTA*VASGPS
Trigger: GGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRADTGLP*CSRWMM
Trigger: CATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTC...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: TQSHSRETPFPSEHVSHLVHALH*ELSQPW
Trigger: CCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGAC...AAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACA +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRACGEKT*SSSKDT
Trigger: TGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp CCTTTCCGCCCATGCAATTTGCACTCAGAGCCACAGCCGAGAGACACCGTTTCCGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: PFRPCNLHSEPQPRDTVSAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...GGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSNSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS TCA 90 bp TATCTTTTCCACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCAATGGTGCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: YLFHALTALTGLRNR*ETSVSSLVSMVQQF
Trigger: GAACTGCTGCACCATTGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTGGAAAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562984.5
CDS TCA 90 bp TGGACACAGGGCTTTGCAGTCTTTCTAAATGAGAATCCTGATGGCTaGAGAAGGCGGATGGTGGAGGGTGACCTAACAGAAGAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WTQGFAVFLNENPDG*RRRMVEGDLTEEGL
Trigger: CAAGCCCTCTTCTGTTAGGTCACCCTCCACCATCCGCCTTCTTCAGCCATCAGGATTCTCATTTAGAAAGACTGCAAAGCCCTGTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565684.5
CDS-3UTR CAA 90 bp ACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGTCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: TCFSSLRGDGAEEEPPLSSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...CGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCGCAAAGATGCAGACATaGAAGCCATCAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAAKMQT*KPSMQE
Trigger: CTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGC...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp ATAGGATTTCAGAGGGAAGAAAATTCGAGAGACCAGCGAGCCAGGCAGGTGAGCAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: IGFQREENSRDQRARQVSNSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...GCTCACCTGCCTGGCTCGCTGGTCTCTCGAATTTTCTTCCCTCTGAAATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000465878.6
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCAACTCAAACACCTTGTaGATGTCGTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLINSNTL*MSSTLC
Trigger: GCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTT...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCACTCAGAGCCACAGCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: ALRATAERHRFLLNMFLIPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...GATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGCCAAACTCAAACACCTaGTTGATGTCGTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRPNSNT*LMSSTL
Trigger: GAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGACATGTTTCTCATCTTaGAGGGGAGACGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRTCFSS*RGDGAE
Trigger: TTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGT...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS-3UTR CAA 90 bp ATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTACATTCAAACCCAGTaGTGTCCTCTAGAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: MFLIFEGRRGRRRASTLAYIQTQ*CPLEQC
Trigger: ACACTGCTCTAGAGGACACAACTGGGTTTGAATGTA...GGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS-3UTR CAA 90 bp TGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTCTCGCCTAGGGATTTTTGTCTGTaGTGTTCAGCACTGTACTCC +
Preference number: 5 (lower is better)
Translates to: CFSSLRGDGAEEEPPLSPRDFCL*CSALYS
Trigger: GGAGTACAGTGCTGAACACAACAGACAAAAATCCCT...AGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS-3UTR CAA 90 bp CTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCTCCACTTCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: LNMFLIFEGRRGRRRASTSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...AGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS-3UTR CAA 90 bp GCCGAGAGACACCGTTTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGTCCACCTCCACTGTCTaGATGACATACTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: AERHRFLLNMFLIFEGRRSTSTV*MTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA...CCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAAACGGTGTCTCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
CDS TCA 90 bp TTACCCTGTAATTACCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCAATGGTGCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LPCNYLTALTGLRNR*ETSVSSLVSMVQQF
Trigger: GAACTGCTGCACCATTGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGTAATTACAGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565871.1
CDS-3UTR CAA 90 bp TTCCTTCTGAACATGTTTCTCATCTTTGAGGGGAGACGGGGCAGAAGAAGAGCCACCTGCTGGGTAACCTaGGACAAGTCTCTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: FLLNMFLIFEGRRGRRRATCWVT*DKSLKF
Trigger: GAACTTAAGAGACTTGTCCAAGGTTACCCAGCAGGT...GGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAGAAACATGTTCAGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS TCA 72 bp CAGACAGGGGCGCAGGGAAGGAGCGCCCGGCGAGACTaGCGCTCCGGCTCCACGCCCGCCTGGCTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: QTGAQGRSARRD*RSGSTPAWLWA
Trigger: AGCCCAGAGCCAGGCGGGCGTGGAGCCGGAGCGTCAGTCTCGCCGGGCGCTCCTTCCCTGCGCCCCTGTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421376.6
ENST00000565871.1
CDS TCA 72 bp CGAGGGCTGTGGCGTCTGACAAGCCGGCTCCCACTGTaGGCAGGGAAGGGCGGATGGGCGGGGGCCACGGCT +
Preference number: 6 (lower is better)
Translates to: RGLWRLTSRLPL*AGKGGWAGATA
Trigger: AGCCGTGGCCCCCGCCCATCCGCCCTTCCCTGCTCACAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS TCA 72 bp GGGGCTGAGTGGGCCCGTGCCGAGGGCTGTGGCGTCTaGCAAGCCGGCTCCCACTGTGAGCAGGGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: GAEWARAEGCGV*QAGSHCEQGRA
Trigger: CGCCCTTCCCTGCTCACAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS TCA 72 bp CCGGGGCCAGCCCAGTCCACGCTAAGGGCTCGGCACTaGGCTAGGGCTGGGCGAGCTGCACTTCGGGCACTG +
Preference number: 6 (lower is better)
Translates to: PGPAQSTLRARH*ARAGRAALRAL
Trigger: CAGTGCCCGAAGTGCAGCTCGCCCAGCCCTAGCTCAGTGCCGAGCCCTTAGCGTGGACTGGGCTGGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
ENST00000561524.5
ENST00000562311.5
ENST00000562503.5
ENST00000562984.5
ENST00000563028.1
ENST00000564891.1
ENST00000565481.5
ENST00000565684.5
ENST00000566648.5
ENST00000566914.1
ENST00000566975.5
ENST00000567059.5
ENST00000569112.5
CDS CCA 72 bp GGTGGGGACTGGGCCCGCAGGCTGGCAATGGTCTCGTaGCTGTCACGCAGGCGCCGACTAAGCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GGDWARRLAMVS*LSRRRRLSRSS
Trigger: GGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS CCA 72 bp GGCCTCCACCATCCTAAGCACCATGGGGGCCGCACCTaGTGGCCCCGACAAGCTCGAGCACCTCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: GLHHPKHHGGRT*WPRQARAPPAA
Trigger: GGCAGCAGGAGGTGCTCGAGCTTGTCGGGGCCACCAGGTGCGGCCCCCATGGTGCTTAGGATGGTGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS GCA 72 bp CCTGGGCAGGGACCTGCTGGCTTTGTGCGCAGCTCTTaGAGCTCGGCCTCACAGCGCCGCATCTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: PGQGPAGFVRSS*SSASQRRISCL
Trigger: GAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 72 bp CCCACCCACACTGCCACTCCAGGCTCACCCGAGGGCTaGAGCTTCCTCCGGATGGATCCAGGGCGGCTACTG +
Preference number: 6 (lower is better)
Translates to: PTHTATPGSPEG*SFLRMDPGRLL
Trigger: CAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGGGTGAGCCTGGAGTGGCAGTGTGGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS GCA 72 bp GGCACCACGAGCACTCTGGCCAAGGCACCAGTGGCCTaGTCCGTGGCAGGTGGTTGGCCAGCTCTACTGGGG +
Preference number: 6 (lower is better)
Translates to: GTTSTLAKAPVA*SVAGGWPALLG
Trigger: CCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCTCGTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp GCAGGGAGAGTGGGGTTTGCCAGTGTTTGCTGGGGGTaGGAGGCGGGATACCCACCAGCCACCTGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: AGRVGFASVCWG*EAGYPPATCLR
Trigger: CCGCAGGCAGGTGGCTGGTGGGTATCCCGCCTCCCACCCCCAGCAAACACTGGCAAACCCCACTCTCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540079.6
ENST00000569222.5
ENST00000623271.1
CDS CCA 72 bp CCTCCCCAGGTACCTGGTTCTGCAGCTGGGTGGACGTaGCCTGCTGGTCACTGTCGCGGAGGGCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PPQVPGSAAGWT*PAGHCRGGPAS
Trigger: AGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CAA 72 bp CAGCCTGGGCAGAGACCGGAGCTAGCCCACACGCTCTaGGCCAAGGACGGCAGCCCGCAGAGCTCTGACCAG +
Preference number: 6 (lower is better)
Translates to: QPGQRPELAHTL*AKDGSPQSSDQ
Trigger: CTGGTCAGAGCTCTGCGGGCTGCCGTCCTTGGCCAAGAGCGTGTGGGCTAGCTCCGGTCTCTGCCCAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421376.6
ENST00000561524.5
ENST00000565871.1
ENST00000566975.5
CDS GCA 72 bp TGCGCCCGGAGCCGCGCGGTCAGCTGGTGTGAGCTCTaGAGCTGCTGTTCCATCTCCTTCAGCACCTGCCTC +
Preference number: 6 (lower is better)
Translates to: CARSRAVSWCEL*SCCSISFSTCL
Trigger: GAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 72 bp TGGCCTATCTCGGCCTTGACACTCCTGAGGGCCTCCTaGAGCAGCAGTGGGAAGCCGCGCACCTGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: WPISALTLLRAS*SSSGKPRTCRL
Trigger: CAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 72 bp CCGCACCTGGTGGCCCCGACAAGCTCGAGCACCTCCTaGTGCCAAAGAGACGCCCACCTGCAGGGTCAGGTA +
Preference number: 6 (lower is better)
Translates to: PHLVAPTSSSTS*CQRDAHLQGQV
Trigger: TACCTGACCCTGCAGGTGGGCGTCTCTTTGGCAGCAGGAGGTGCTCGAGCTTGTCGGGGCCACCAGGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS GCA 72 bp CCAGGTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTaGTGGTCACTGTCGCGGAGGGCCAGCCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PGTWFCSWVDVA*WSLSRRASLSC
Trigger: ACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566914.1
CDS CCA 72 bp GCCAAGGCACCAGTGGCCTGCTCCGTGGCAGGTGGTTaGCCAGCTCTACTGGGGGCTAGGTCTCGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: AKAPVACSVAGG*PALLGARSRAC
Trigger: ACAAGCCCGAGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp CGAGCACTCTGGCCAAGGCACCAGTGGCCTGCTCCGTaGCAGGTGGTTGGCCAGCTCTACTGGGGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: RALWPRHQWPAP*QVVGQLYWGLG
Trigger: ACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCACTGGTGCCTTGGCCAGAGTGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp GGCTGTGCTCACAACCTGGGCAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCTCGGCCTCACAGCGCC +
Preference number: 6 (lower is better)
Translates to: GCAHNLGRDLLA*CAALAARPHSA
Trigger: GGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS CAA 90 bp GTGCTCACAACCTGGGCAGGGACCTGCTGGCTTTGTGCGCAGCTCTaGCAGCTCGGCCTCACAGCGCCGCATCTCCTGCCTCAGTCGCTC +
Preference number: 6 (lower is better)
Translates to: VLTTWAGTCWLCAQL*QLGLTAPHLLPQSL
Trigger: GAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS CAA 90 bp CGCTCTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTGCTGGCTTaGTGCGCAGCTCTTGCAGCTCGGCCTCACAGCGCCGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: RSPGCAHNLGRDLLA*CAALAARPHSAASP
Trigger: AGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS CAA 90 bp CCTCCTCGGGGCACCAGGCAGCCAATGGTGCAGCAGTTCCCGGCCTaGCTGCAGAAGGCCCTGCTACTGGGGCACCTAGAGCCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: PPRGTRQPMVQQFPA*LQKALLLGHLEPQK
Trigger: CTTCTGAGGCTCTAGGTGCCCCAGTAGCAGGGCCTTCTGCAGCAAGGCCGGGAACTGCTGCACCATTGGCTGCCTGGTGCCCCGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564891.1
ENST00000567204.5
CDS TCA 72 bp CCGCTCGCGCCCCTCCCGCACACTTTCCACAGGAAATaGTTAACTCGGGCCGCGGCGCGTTCCCATGGCAAC +
Preference number: 6 (lower is better)
Translates to: PLAPLPHTFHRK*LTRAAARSHGN
Trigger: GTTGCCATGGGAACGCGCCGCGGCCCGAGTTAATCATTTCCTGTGGAAAGTGTGCGGGAGGGGCGCGAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379655.8
CDS GCA 72 bp GCTCTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTaGTGGCTTTGTGCGCAGCTCTTGCAGCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: ALLAVLTTWAGT*WLCAQLLQLGL
Trigger: GAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 72 bp CACCTGGTGGCCCCGACAAGCTCGAGCACCTCCTGCTaGCAAAGAGACGCCCACCTGCAGGGTCAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: HLVAPTSSSTSC*QRDAHLQGQVE
Trigger: CTCTACCTGACCCTGCAGGTGGGCGTCTCTTTGGCAGCAGGAGGTGCTCGAGCTTGTCGGGGCCACCAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS CCA 72 bp GGCCTTGACACTCCTGAGGGCCTCCTGCAGCAGCAGTaGGAAGCCGCGCACCTGCCGCTTGAGCCCATTGTA +
Preference number: 6 (lower is better)
Translates to: GLDTPEGLLQQQ*EAAHLPLEPIV
Trigger: TACAATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CCA 72 bp CCTGATGCAGGGAGAGTGGGGTTTGCCAGTGTTTGCTaGGGGTGGGAGGCGGGATACCCACCAGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: PDAGRVGFASVC*GWEAGYPPATC
Trigger: GCAGGTGGCTGGTGGGTATCCCGCCTCCCACCCCCAGCAAACACTGGCAAACCCCACTCTCCCTGCATCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540079.6
ENST00000569222.5
ENST00000623271.1
CDS CCA 72 bp GACCAGGGCCTGCACCTCGTCCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGG +
Preference number: 6 (lower is better)
Translates to: DQGLHLVLLRGL*GEDLVQLEGHR
Trigger: CCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGAGGTGCAGGCCCTGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS CCA 72 bp GGTCCCGAGTGCCACCCTGGGCCCGATACATACTTGTaGCCACAAAGGGGCAGCAGGCACATGCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: GPECHPGPDTYL*PQRGSRHMPEP
Trigger: GGGCTCAGGCATGTGCCTGCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp GGCACCAGGCAGCCAATGGTGCAGCAGTTCCCGGCCTaGCTGCAGAAGGCCCTGCTACTGGGGCACCTAGAG +
Preference number: 6 (lower is better)
Translates to: GTRQPMVQQFPA*LQKALLLGHLE
Trigger: CTCTAGGTGCCCCAGTAGCAGGGCCTTCTGCAGCAAGGCCGGGAACTGCTGCACCATTGGCTGCCTGGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564891.1
ENST00000567204.5
CDS CAA 72 bp GGCTGCTGCCTCAGCATGGGGCTGGGCGCACTAACCTaGATCATCTCCACTGCCGCCCCTGCCAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: GCCLSMGLGALT*IISTAAPARHS
Trigger: TGAGTGCCTGGCAGGGGCGGCAGTGGAGATGATCAAGGTTAGTGCGCCCAGCCCCATGCTGAGGCAGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 90 bp CTTGTTTACCAGCCTGGGCAGAGACCGGAGCTAGCCCACACGCTCTaGGCCAAGGACGGCAGCCCGCAGAGCTCTGACCAGCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LVYQPGQRPELAHTL*AKDGSPQSSDQLGQ
Trigger: CTGGCCAAGCTGGTCAGAGCTCTGCGGGCTGCCGTCCTTGGCCAAGAGCGTGTGGGCTAGCTCCGGTCTCTGCCCAGGCTGGTAAACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421376.6
ENST00000561524.5
ENST00000565871.1
ENST00000566975.5
CDS TCA 72 bp CACGCTCTTGGCCAAGGACGGCAGCCCGCAGAGCTCTaGCCAGCTTGGCCAGAGGGAATGCAGCTGATTCCC +
Preference number: 6 (lower is better)
Translates to: HALGQGRQPAEL*PAWPEGMQLIP
Trigger: GGGAATCAGCTGCATTCCCTCTGGCCAAGCTGGTCAGAGCTCTGCGGGCTGCCGTCCTTGGCCAAGAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421376.6
ENST00000565871.1
ENST00000566975.5
CDS GCA 72 bp AGCCGCACGAGCTCATTGTGGCACTTCTTACGCAGCTaGAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRTSSLWHFLRS*SSRRYLRSSSW
Trigger: CCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 72 bp TGTTCTACCTGGTTCTGCAGCTGGGTGGACGTGGCCTaGTGGTCACTGTCGCGGAGGGCCAGCCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: CSTWFCSWVDVA*WSLSRRASLSC
Trigger: ACAGGAGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTAGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS GCA 72 bp GCCACCTGCCTGCGGCCCAGGGTTCTGTTCTGTCCTTaGATCACAATGGGAACCTGGGGGCTCCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: ATCLRPRVLFCP*ITMGTWGLLGS
Trigger: AGAGCCCAGGAGCCCCCAGGTTCCCATTGTGATGCAAGGACAGAACAGAACCCTGGGCCGCAGGCAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp CTCCTGGCTGTGCTCACAACCTGGGCAGGGACCTGCTaGCTTTGTGCGCAGCTCTTGCAGCTCGGCCTCACA +
Preference number: 6 (lower is better)
Translates to: LLAVLTTWAGTC*LCAQLLQLGLT
Trigger: TGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000569112.5
ENST00000569222.5
CDS CCA 72 bp TCAGGTGTTCTACCTGGTTCTGCAGCTGGGTGGACGTaGCCTGCTGGTCACTGTCGCGGAGGGCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SGVLPGSAAGWT*PAGHCRGGPAS
Trigger: AGAGGCTGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTAGAACACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS CCA 72 bp GTAGTGTTCGGCCTCGGAGGTCCCTGTCTCCCAGGGTaGGAGAGAACGGCTGACTCACAGCAGCTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VVFGLGGPCLPG*ERTADSQQLGQ
Trigger: CTGGCCTAGCTGCTGTGAGTCAGCCGTTCTCTCCCACCCTGGGAGACAGGGACCTCCGAGGCCGAACACTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564204.1
CDS CCA 72 bp TCAGGCCCAGCGGGGTCACATCCGTCACACAGGCAGTaGCCGCGACTTCCCTGTACCACCATGAGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SGPAGSHPSHRQ*PRLPCTTMRVL
Trigger: CAAGACCCTCATGGTGGTACAGGGAAGTCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565397.1
CDS CAA 72 bp GTGAGGGTCCGCAGTGCCGGCTGCAAGGTCAGCAAGTaGGTCCGGACGCCTGCTAGATTCTCGTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: VRVRSAGCKVSK*VRTPARFSCTA
Trigger: GGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp GAGGGTCCCGAGTGCCACCCTGGGCCCGATACATACTaGTGGCCACAAAGGGGCAGCAGGCACATGCCTGAG +
Preference number: 6 (lower is better)
Translates to: EGPECHPGPDTY*WPQRGSRHMPE
Trigger: CTCAGGCATGTGCCTGCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp AGCCACCTGCCTGCGGCCCAGGGTTCTGTTCTGTCCTaGCATCACAATGGGAACCTGGGGGCTCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: SHLPAAQGSVLS*HHNGNLGAPGL
Trigger: GAGCCCAGGAGCCCCCAGGTTCCCATTGTGATGCAAGGACAGAACAGAACCCTGGGCCGCAGGCAGGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 90 bp CGCAGCTGCAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATGGCCTGGCCTATCTCGGCCTTGACA +
Preference number: 6 (lower is better)
Translates to: RSCSSRRYLRSSSWL*LLTSSMAWPISALT
Trigger: TGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 90 bp CCAACAGGGGAGGGTCCCGAGTGCCACCCTGGGCCCGATACATACTaGTGGCCACAAAGGGGCAGCAGGCACATGCCTGAGCCCAAGACA +
Preference number: 6 (lower is better)
Translates to: PTGEGPECHPGPDTY*WPQRGSRHMPEPKT
Trigger: TGTCTTGGGCTCAGGCATGTGCCTGCTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 90 bp TGCAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGGCCTATCTCGGCCTTGACACTCCTG +
Preference number: 6 (lower is better)
Translates to: CSSRRYLRSSSWLLL*TSSMAWPISALTLL
Trigger: CAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 90 bp TTACGCAGCTGCAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCGATGGCCTGGCCTATCTCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LRSCSSRRYLRSSSW*LLLTSSMAWPISAL
Trigger: CAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 90 bp ACCTCCTGGAACACGTCCTGCTGCGAGGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTGCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: TSWNTSCCEACGEKT*SSSKDTGLPLCSRW
Trigger: CCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS GCA 72 bp AGCTCTTGCAGCTCGGCCTCACAGCGCCGCATCTCCTaGCTCAGTCGCTCATTCTCCACCATCAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSCSSASQRRIS*LSRSFSTISRS
Trigger: GGACCTGCTGATGGTGGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000562984.5
ENST00000564136.5
ENST00000565481.5
ENST00000566648.5
ENST00000567204.5
ENST00000569112.5
ENST00000569222.5
CDS GCA 72 bp CTTGAGCCCATTGTAGTCGTTGGTGAGGGTCCGCAGTaGCGGCTGCAAGGTCAGCAAGTTGGTCCGGACGCC +
Preference number: 6 (lower is better)
Translates to: LEPIVVVGEGPQ*RLQGQQVGPDA
Trigger: GGCGTCCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 72 bp TCAGACGCCTTCTCCTGCACCTCGGAGAAGAGCAGCTaGAGGGCCCGCTGGTTGATACCTGGGTTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: SDAFSCTSEKSS*RARWLIPGFSA
Trigger: CGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565270.1
CDS GCA 72 bp TCCTCATCAGCCAGAGCAACTGAATCACGGGCCTGCTaGAGGGGGCGTCACCCTGCCTGCTCAAGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSSARATESRAC*RGRHPACSRGR
Trigger: TCTTCCCCTTGAGCAGGCAGGGTGACGCCCCCTGCAGCAGGCCCGTGATTCAGTTGCTCTGGCTGATGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp CTGCACCTCCTGGAACACGTCCTGCTGCGAGGCCTGTaGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGG +
Preference number: 6 (lower is better)
Translates to: LHLLEHVLLRGL*GEDLVQLEGHR
Trigger: CCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CCA 72 bp AGCCTCTCCTGTAGGACCACCAGCTCCTCCTGTAGCTaGGTCTTCTCGTCCTGGAGCTGGGACATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLSCRTTSSSCS*VFSSWSWDMAS
Trigger: GGAGGCCATGTCCCAGCTCCAGGACGAGAAGACCCAGCTACAGGAGGAGCTGGTGGTCCTACAGGAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS CCA 72 bp TCTCCTTCAGGTGTTCTACCTGGTTCTGCAGCTGGGTaGACGTGGCCTGCTGGTCACTGTCGCGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: SPSGVLPGSAAG*TWPAGHCRGGP
Trigger: TGGCCCTCCGCGACAGTGACCAGCAGGCCACGTCCACCCAGCTGCAGAACCAGGTAGAACACCTGAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS CCA 72 bp TCTAAGCCCAACAGGGGAGGGTCCCGAGTGCCACCCTaGGCCCGATACATACTTGTGGCCACAAAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SKPNRGGSRVPP*ARYILVATKGQ
Trigger: CTGCCCCTTTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGTTGGGCTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp TGGCCTGCTCCGTGGCAGGTGGTTGGCCAGCTCTACTaGGGGCTAGGTCTCGGGCTTGTAGGGAAGATGTCT +
Preference number: 6 (lower is better)
Translates to: WPAPWQVVGQLY*GLGLGLVGKMS
Trigger: AGACATCTTCCCTACAAGCCCGAGACCTAGCCCCCAGTAGAGCTGGCCAACCACCTGCCACGGAGCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp CGGCGGTACTTGCGCAGCAGCTCCTGGTTGTTGCTGTaGACCTCCTCGATGGCCTGGCCTATCTCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RRYLRSSSWLLL*TSSMAWPISAL
Trigger: CAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp AGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTTGTaGCTGTTGACCTCCTCGATGGCCTGGCCTATCTCG +
Preference number: 6 (lower is better)
Translates to: SSRRYLRSSSWL*LLTSSMAWPIS
Trigger: CGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp TGCAGCTCGCGGCGGTACTTGCGCAGCAGCTCCTGGTaGTTGCTGTTGACCTCCTCGATGGCCTGGCCTATC +
Preference number: 6 (lower is better)
Translates to: CSSRRYLRSSSW*LLLTSSMAWPI
Trigger: GATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp ACCTCGTCCTGCTGCGAGGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: TSSCCEACGEKT*SSSKDTGLPLC
Trigger: GCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543930.5
CDS CAA 72 bp GGCTCGACCAAGGGTGGGGCCAGCCAGCCCAGGTCTTaGTGTTTTCTCAGCTGTCTGCTTCCAAGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: GSTKGGASQPRS*CFLSCLLPRRP
Trigger: AGGCCGCCTTGGAAGCAGACAGCTGAGAAAACACAAAGACCTGGGCTGGCTGGCCCCACCCTTGGTCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 90 bp GAGGCCTGTGGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGGATGATGGAGTCGTCGTCGGCATCG +
Preference number: 6 (lower is better)
Translates to: EACGEKTLSSSKDTG*PLCSRWMMESSSAS
Trigger: CGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 90 bp GGGCTCCCGCCTCCACACCTTGTTGATGTCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTGCCGTC +
Preference number: 6 (lower is better)
Translates to: GLPPPHLVDVVHALH*ELSQPWYIQLPTAV
Trigger: GACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS CAA 90 bp GGCAGAAGCGGCTCGACCAAGGGTGGGGCCAGCCAGCCCAGGTCTTaGTGTTTTCTCAGCTGTCTGCTTCCAAGGCGGCCTCTTACCATC +
Preference number: 6 (lower is better)
Translates to: GRSGSTKGGASQPRS*CFLSCLLPRRPLTI
Trigger: GATGGTAAGAGGCCGCCTTGGAAGCAGACAGCTGAGAAAACACAAAGACCTGGGCTGGCTGGCCCCACCCTTGGTCGAGCCGCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS GCA 72 bp CGCAGCTCCACCTCAGCCAGCCGGTCGGTCTTCTGCTaGACCTCTAGGTTCAGCTCTGACAGCATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: RSSTSASRSVFC*TSRFSSDSMPL
Trigger: CAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562503.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS GCA 72 bp AGTCGCAGCTCCACCTCAGCCAGCCGGTCGGTCTTCTaGTGCACCTCTAGGTTCAGCTCTGACAGCATGCCT +
Preference number: 6 (lower is better)
Translates to: SRSSTSASRSVF*CTSRFSSDSMP
Trigger: AGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562503.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS GCA 72 bp GAGGGAGCTGGGCCTGTCTGCCGGCTTGACACCACCTaGATTTACACTTCACAGGCAGAAGCGGCTCGACCA +
Preference number: 6 (lower is better)
Translates to: EGAGPVCRLDTT*IYTSQAEAARP
Trigger: TGGTCGAGCCGCTTCTGCCTGTGAAGTGTAAATGCAGGTGGTGTCAAGCCGGCAGACAGGCCCAGCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp ACTGAGCTAGGGCTGGGCGAGCTGCACTTCGGGCACTaGAGTCCTCGTCACCGCAGACTGGGGTATCTTTTC +
Preference number: 6 (lower is better)
Translates to: TELGLGELHFGH*SPRHRRLGYLF
Trigger: GAAAAGATACCCCAGTCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCAGCTCGCCCAGCCCTAGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000541240.5
ENST00000561524.5
ENST00000562311.5
ENST00000562503.5
ENST00000562984.5
ENST00000563028.1
ENST00000564891.1
ENST00000565481.5
ENST00000565684.5
ENST00000565871.1
ENST00000566648.5
ENST00000566914.1
ENST00000566975.5
ENST00000567059.5
ENST00000569112.5
CDS CCA 72 bp ACCACCAGCTCCTCCTGTAGCTGGGTCTTCTCGTCCTaGAGCTGGGACATGGCCTCCACCATCCTAAGCACC +
Preference number: 6 (lower is better)
Translates to: TTSSSCSWVFSS*SWDMASTILST
Trigger: GGTGCTTAGGATGGTGGAGGCCATGTCCCAGCTCCAGGACGAGAAGACCCAGCTACAGGAGGAGCTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561524.5
ENST00000562503.5
ENST00000566914.1
CDS CCA 72 bp AGGGCTTGCGGCAGACACTGGAATGCGATGTTCTGCTaGGAAACCCAGCCACCTGGGCGGAGATGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: RACGRHWNAMFC*ETQPPGRRCLE
Trigger: TTCCAGGCATCTCCGCCCAGGTGGCTGGGTTTCCCAGCAGAACATCGCATTCCAGTGTCTGCCGCAAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565684.5
CDS CAA 72 bp TGGCACTTCTTACGCAGCTGCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTGTTGCTGTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: WHFLRSCSSRRY*RSSSWLLLLTS
Trigger: GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp AACACGTCCTGCTGCGAGGCCTGTGGGGAGAAGACCTaGTCCAGCTCGAAGGACACAGGCTTGCCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: NTSCCEACGEKT*SSSKDTGLPLC
Trigger: GCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 90 bp AGCTCATTGTGGCACTTCTTACGCAGCTGCAGCTCGCGGCGGTACTaGCGCAGCAGCTCCTGGTTGTTGCTGTTGACCTCCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: SSLWHFLRSCSSRRY*RSSSWLLLLTSSMA
Trigger: GGCCATCGAGGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS TCA 72 bp CAGAGCTCTGACCAGCTTGGCCAGAGGGAATGCAGCTaGTTCCCCCTGCTCTGTGCCCGACCCGTGTTAAAG +
Preference number: 6 (lower is better)
Translates to: QSSDQLGQRECS*FPLLCARPVLK
Trigger: CTTTAACACGGGTCGGGCACAGAGCAGGGGGAATCAGCTGCATTCCCTCTGGCCAAGCTGGTCAGAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421376.6
ENST00000565871.1
ENST00000566975.5
CDS TCA 72 bp CCCACCAAGCCCAGTCAACGATCATCAGCTGTCTGCTaGGGAAAAGCGGGCTCTCCCAGGCTGAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PTKPSQRSSAVC*GKAGSPRLKLL
Trigger: CAGCAGCTTCAGCCTGGGAGAGCCCGCTTTTCCTCAGCAGACAGCTGATGATCGTTGACTGGGCTTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS TCA 72 bp AGGACGGAGGAGAAAGCAGACTCCCCACTAGGCGGCTaGAACGGTCCCAGGACAGCATGGACGTCAATCCAG +
Preference number: 6 (lower is better)
Translates to: RTEEKADSPLGG*NGPRTAWTSIQ
Trigger: CTGGATTGACGTCCATGCTGTCCTGGGACCGTTTCAGCCGCCTAGTGGGGAGTCTGCTTTCTCCTCCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS GCA 72 bp TCCATTTCCCACCTGCAGAACGGACACAGCACTGTCTaGCCTGACTACTGCCTGGGGGCAGGGGAGGTTGTA +
Preference number: 6 (lower is better)
Translates to: SISHLQNGHSTV*PDYCLGAGEVV
Trigger: TACAACCTCCCCTGCCCCCAGGCAGTAGTCAGGGCAGACAGTGCTGTGTCCGTTCTGCAGGTGGGAAATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS GCA 72 bp TCCATGTCTCTAAGCCCAACAGGGGAGGGTCCCGAGTaGCACCCTGGGCCCGATACATACTTGTGGCCACAA +
Preference number: 6 (lower is better)
Translates to: SMSLSPTGEGPE*HPGPDTYLWPQ
Trigger: TTGTGGCCACAAGTATGTATCGGGCCCAGGGTGGCACTCGGGACCCTCCCCTGTTGGGCTTAGAGACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp TGCACTTCGGGCACTGGAGTCCTCGTCACCGCAGACTaGGGTATCTTTTCCACGCCCAGTTCTCAACCTCCC +
Preference number: 6 (lower is better)
Translates to: CTSGTGVLVTAD*GIFSTPSSQPP
Trigger: GGGAGGTTGAGAACTGGGCGTGGAAAAGATACCCCAGTCTGCGGTGACGAGGACTCCAGTGCCCGAAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000445690.7
ENST00000541240.5
ENST00000562503.5
ENST00000563028.1
ENST00000564891.1
ENST00000565684.5
ENST00000566648.5
ENST00000566914.1
ENST00000567059.5
CDS CCA 72 bp AGTCAGCCCTGGTACATACAGCTGCCCACTGCCGTCTaGGCACAGCCGGATCTCCAGTTTTTCCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SQPWYIQLPTAV*AQPDLQFFLRL
Trigger: GAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565270.1
CDS CCA 72 bp ACTGGGGTATCTTTTCCACGCCCTTGTTTACCAGCCTaGGCAGAGACCGGAGCTAGCCCACACGCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: TGVSFPRPCLPA*AETGASPHALG
Trigger: GCCAAGAGCGTGTGGGCTAGCTCCGGTCTCTGCCCAGGCTGGTAAACAAGGGCGTGGAAAAGATACCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421376.6
ENST00000465878.6
ENST00000561524.5
ENST00000565871.1
ENST00000566975.5
CDS CCA 72 bp GACTGGCCGGACACGAGCAATCACTCGGATGTTCCCTaGATTGGTTGGGGATGGGGAAATGGGTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: DWPDTSNHSDVP*IGWGWGNGSRP
Trigger: TGGCCTGGACCCATTTCCCCATCCCCAACCAATCCAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS CAA 72 bp TTCCGGGCCTGGGACTCGCTGAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACTGTCTTGATGACATAC +
Preference number: 6 (lower is better)
Translates to: FRAWDSLRACLV*DDSTSTVLMTY
Trigger: GTATGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS CAA 72 bp ATCACTCGGATGTTCCCTTTCAGCCGCACGAGCTCATaGTGGCACTTCTTACGCAGCTGCAGCTCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: ITRMFPFSRTSS*WHFLRSCSSRR
Trigger: CCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGAAAGGGAACATCCGAGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp GGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGGCTaGCCCTTGTGCAGCAGGTGGATGATGGAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GEKTLSSSKDTG*PLCSRWMMESS
Trigger: CGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 90 bp AGGTGCTGGTTCCGGGCCTGGGACTCGCTGAGGGCCTGCTTGGTCTaGGACGACTCCACCTCCACTGTCTTGATGACATACTTGACAGGT +
Preference number: 6 (lower is better)
Translates to: RCWFRAWDSLRACLV*DDSTSTVLMTYLTG
Trigger: ACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS CAA 90 bp TGTGGGGAGAAGACCTTGTCCAGCTCGAAGGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATGGAGTCGTCGTCGGCATCGAAAGTC +
Preference number: 6 (lower is better)
Translates to: CGEKTLSSSKDTGLP*CSRWMMESSSASKV
Trigger: GACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 90 bp ACCTCAGTCTCATCTCTGGTATCAATGGTGCAGCAGTTCCCGGCCTaGCTGCAGAAGGCCCTGCTACTGGGGCACCTAGAGCCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: TSVSSLVSMVQQFPA*LQKALLLGHLEPQK
Trigger: CTTCTGAGGCTCTAGGTGCCCCAGTAGCAGGGCCTTCTGCAGCAAGGCCGGGAACTGCTGCACCATTGATACCAGAGATGAGACTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562984.5
CDS TCA 72 bp CATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTTGGTaGCTGGCCGGACACGAGCAATCACTCGGATGTTCC +
Preference number: 6 (lower is better)
Translates to: HWWPQVLPHPLW*LAGHEQSLGCS
Trigger: GGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS TCA 72 bp GCCTGTCTCTTCCAAAGCTTCTCTTCTTTCGTCCCCTaGCTCTGGCTCTTGCACCCCTTGTCCTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ACLFQSFSSFVP*LWLLHPLSCRA
Trigger: GGCCCTGCAGGACAAGGGGTGCAAGAGCCAGAGTCAGGGGACGAAAGAAGAGAAGCTTTGGAAGAGACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465878.6
ENST00000562311.5
ENST00000567059.5
CDS TCA 72 bp CACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HALTALTGLRNR*ETSVSSLVSAW
Trigger: CCAGGCCGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562311.5
ENST00000569112.5
CDS TCA 72 bp TCCGTCCCCTCCTTCCCAGATTACCACCTGCCCCTTTaGCCCTGCCCTTTGGTCATCAGCCACAATCAGCTG +
Preference number: 6 (lower is better)
Translates to: SVPSFPDYHLPL*PCPLVISHNQL
Trigger: CAGCTGATTGTGGCTGATGACCAAAGGGCAGGGTCAAAGGGGCAGGTGGTAATCTGGGAAGGAGGGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563028.1
CDS GCA 72 bp GCTGCACCTCTAGGTTCAGCTCTGACAGCATGCCTTTaGTTTCCGCCATCTCCAGCTGCAGCTGGGACAGCT +
Preference number: 6 (lower is better)
Translates to: AAPLGSALTACL*FPPSPAAAGTA
Trigger: AGCTGTCCCAGCTGCAGCTGGAGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562311.5
ENST00000562503.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
ENST00000569222.5
CDS GCA 72 bp GTCAGCAAGTTGGTCCGGACGCCTGCTAGATTCTCGTaGACAGCCTTCATCTCCACCTGGGCTCTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: VSKLVRTPARFS*TAFISTWALAK
Trigger: CTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCAACTTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS GCA 72 bp ACATTGAAGCCATCAATGCAAGAGGTGACCAGGGCCTaGACCTCCTGGAACACGTCCTGCTGCGAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: TLKPSMQEVTRA*TSWNTSCCEAC
Trigger: ACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCTCTTGCATTGATGGCTTCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS GCA 72 bp GGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTaGCGTCTGGGCACAGCCGGATCTCCAGTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: GTQSALVHTAAH*RLGTAGSPVFP
Trigger: AGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565270.1
CDS GCA 72 bp CACTGCCCCCTTCCCACAGACCTTCCATTTCCCACCTaGAGAACGGACACAGCACTGTCTGCCCTGACTACT +
Preference number: 6 (lower is better)
Translates to: HCPLPTDLPFPT*RTDTALSALTT
Trigger: AGTAGTCAGGGCAGACAGTGCTGTGTCCGTTCTGCAGGTGGGAAATGGAAGGTCTGTGGGAAGGGGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565753.1
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTGC +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTC
Trigger: GCAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000541240.5
ENST00000562903.5
ENST00000562984.5
ENST00000565481.5
ENST00000565684.5
ENST00000566648.5
ENST00000569112.5
CDS CCA 72 bp TCCACTGTCTTGATGACATACTTGACAGGTGGGGACTaGGCCCGCAGGCTGGCAATGGTCTCGTGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: STVLMTYLTGGD*ARRLAMVSWLS
Trigger: TGACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
ENST00000565481.5
CDS CCA 72 bp AAGCCAGTGGTGGATAGGGCTGGAAACACGGCACCATaGAAAACAAGGCAGAGTGTACCCCCTGGCGGGCTT +
Preference number: 6 (lower is better)
Translates to: KPVVDRAGNTAP*KTRQSVPPGGL
Trigger: AAGCCCGCCAGGGGGTACACTCTGCCTTGTTTTCCATGGTGCCGTGTTTCCAGCCCTATCCACCACTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTGG +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTW
Trigger: CCAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561524.5
ENST00000562503.5
CDS CCA 72 bp GCCGGACACGAGCAATCACTCGGATGTTCCCTGGATTaGTTGGGGATGGGGAAATGGGTCCAGGCCATGTCA +
Preference number: 6 (lower is better)
Translates to: AGHEQSLGCSLD*LGMGKWVQAMS
Trigger: TGACATGGCCTGGACCCATTTCCCCATCCCCAACCAATCCAGGGAACATCCGAGTGATTGCTCGTGTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS CCA 72 bp ACAGAAAGGGTGGTGGGGCTGGAGCGTGCTAAAGGATaGTCACCTCCACCAAAGGCAGGAGCTGCCACTAGA +
Preference number: 6 (lower is better)
Translates to: TERVVGLERAKG*SPPPKAGAATR
Trigger: TCTAGTGGCAGCTCCTGCCTTTGGTGGAGGTGACCATCCTTTAGCACGCTCCAGCCCCACCACCCTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp ACAGCATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGAGCAATCACTCGGATG +
Preference number: 6 (lower is better)
Translates to: TALVASGPSPSS*VTGRTRAITRM
Trigger: CATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 72 bp AAGACCTTGTCCAGCTCGAAGGACACAGGCTTGCCCTaGTGCAGCAGGTGGATGATGGAGTCGTCGTCGGCA +
Preference number: 6 (lower is better)
Translates to: KTLSSSKDTGLP*CSRWMMESSSA
Trigger: TGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCTGGACAAGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CAA 72 bp TCATCTCTGGTATCAATGGTGCAGCAGTTCCCGGCCTaGCTGCAGAAGGCCCTGCTACTGGGGCACCTAGAG +
Preference number: 6 (lower is better)
Translates to: SSLVSMVQQFPA*LQKALLLGHLE
Trigger: CTCTAGGTGCCCCAGTAGCAGGGCCTTCTGCAGCAAGGCCGGGAACTGCTGCACCATTGATACCAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562984.5
ENST00000565871.1
CDS CAA 72 bp GTCCGTCCCCTCCTTCCCAGATTACCACCTGCCCCTTaGACCCTGCCCTTTGGTCATCAGCCACAATCAGCT +
Preference number: 6 (lower is better)
Translates to: VRPLLPRLPPAP*TLPFGHQPQSA
Trigger: AGCTGATTGTGGCTGATGACCAAAGGGCAGGGTCAAAGGGGCAGGTGGTAATCTGGGAAGGAGGGGACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563028.1
CDS CAA 90 bp TCGAAAGTCACAGCATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGAGCAATCACTCGGATGTTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: SKVTALVASGPSPSS*VTGRTRAITRMFPG
Trigger: TCCAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS TCA 72 bp CGAAGGACACAGGCTTGCCCTTGTGCAGCAGGTGGATaGTGGAGTCGTCGTCGGCATCGAAAGTCACAGCAT +
Preference number: 6 (lower is better)
Translates to: RRTQACPCAAGG*WSRRRHRKSQH
Trigger: ATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS GCA 72 bp TCCCGCCTCCACACCTTGTTGATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGCCCTGGTACATACAGC +
Preference number: 6 (lower is better)
Translates to: SRLHTLLMSSTL*TWNSVSPGTYS
Trigger: GCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS GCA 72 bp TTTGACCCTGCCCTTTGGTCATCAGCCACAATCAGCTaGTGTCTCCACCAAGCCTCACCAGCTCTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: FDPALWSSATIS*CLHQASPALQA
Trigger: GGCTTGGAGAGCTGGTGAGGCTTGGTGGAGACAGCAGCTGATTGTGGCTGATGACCAAAGGGCAGGGTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563028.1
CDS CCA 72 bp AGCTCGAAGGACACAGGCTTGCCCTTGTGCAGCAGGTaGATGATGGAGTCGTCGTCGGCATCGAAAGTCACA +
Preference number: 6 (lower is better)
Translates to: SSKDTGLPLCSR*MMESSSASKVT
Trigger: TGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTTCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000563266.1
ENST00000564136.5
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTGT +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTC
Trigger: ACAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465878.6
ENST00000562311.5
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTTG +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTL
Trigger: CAAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540079.6
CDS CCA 72 bp CTACATTCAAACCCAGTTGTGTCCTCTAGAGCAGTGTaGCTGTGGTCAGGGGCTCCCGCCTCCACACCTTGT +
Preference number: 6 (lower is better)
Translates to: LHSNPVVSSRAV*LWSGAPASTPC
Trigger: ACAAGGTGTGGAGGCGGGAGCCCCTGACCACAGCCACACTGCTCTAGAGGACACAACTGGGTTTGAATGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCAGT +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTS
Trigger: ACTGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567204.5
CDS CCA 72 bp CCCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTCT +
Preference number: 6 (lower is better)
Translates to: PSSDRSRLTSWA*LMSFSFRCSTS
Trigger: AGAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566975.5
CDS CCA 72 bp TTTACACTTCACAGGCAGAAGCGGCTCGACCAAGGGTaGGGCCAGCCAGCCCAGGTCTTTGTGTTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: FTLHRQKRLDQG*GQPAQVFVFSQ
Trigger: CTGAGAAAACACAAAGACCTGGGCTGGCTGGCCCCACCCTTGGTCGAGCCGCTTCTGCCTGTGAAGTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp CCTCCACACCTTGTTGATGTCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGGTACATACAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PPHLVDVVHALH*ELSQPWYIQLP
Trigger: GGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS CAA 90 bp TCGAAAGTCACAGCATTGGTGGCCTCAGGTCCTTCCCCATCCTCTTaGGTGACTGGCCGGACACGAGCAATCACTCGGATGTTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: SKVTALVASGPSPSS*VTGRTRAITRMFPF
Trigger: GAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCACCAATGCTGTGACTTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000564136.5
CDS CAA 90 bp GTGGCCAAACTCAAACACCTTGTTGATGTCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGGTACATACAGCTGCCCACTGCCGTC +
Preference number: 6 (lower is better)
Translates to: VAKLKHLVDVVHALH*ELSQPWYIQLPTAV
Trigger: GACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS TCA 72 bp GGGAGGCCTCAGGAAACTTACAATCTTGAGGTCACCTaGCCAGTAAGTGGTGGACCTAGGACCGGAACTCGC +
Preference number: 6 (lower is better)
Translates to: GRPQETYNLEVT*PVSGGPRTGTR
Trigger: GCGAGTTCCGGTCCTAGGTCCACCACTTACTGGTCAGGTGACCTCAAGATTGTAAGTTTCCTGAGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563295.1
CDS GCA 72 bp CTGGGGGCTAGGTCTCGGGCTTGTAGGGAAGATGTCTaGTTTCTCCTGCACTTGAAGGCAGGCAATCTCTCA +
Preference number: 6 (lower is better)
Translates to: LGARSRACREDV*FLLHLKAGNLS
Trigger: TGAGAGATTGCCTGCCTTCAAGTGCAGGAGAAAGCAGACATCTTCCCTACAAGCCCGAGACCTAGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp CTCCACACCTTGTTGATGTCGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGTACATACAGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LHTLLMSSTLCT*NSVSPGTYSCP
Trigger: TGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564136.5
CDS CCA 72 bp TGCAGCTCAGATCGCAGTCGGCTCACTTCCTGGGCCTaGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTTG +
Preference number: 6 (lower is better)
Translates to: CSSDRSRLTSWA*LMSFSFRCSTL
Trigger: CAAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGTGAGCCGACTGCGATCTGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569222.5
CDS CAA 72 bp GGACACGAGCAATCACTCGGATGTTCCCTGGATTGGTaGGGGATGGGGAAATGGGTCCAGGCCATGTCAAGA +
Preference number: 6 (lower is better)
Translates to: GHEQSLGCSLDW*GMGKWVQAMSR
Trigger: TCTTGACATGGCCTGGACCCATTTCCCCATCCCCAACCAATCCAGGGAACATCCGAGTGATTGCTCGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563266.1
CDS CAA 72 bp GGGGCACCAGGCAGCCTGGAGGAGCCACTCTGTTCTTaGTCTCCCAAACAGAGGCAGCATTTTATTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GAPGSLEEPLCS*SPKQRQHFIPE
Trigger: CTCTGGAATAAAATGCTGCCTCTGTTTGGGAGACAAAGAACAGAGTGGCTCCTCCAGGCTGCCTGGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566648.5
CDS TCA 72 bp CACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCAATGGTG +
Preference number: 6 (lower is better)
Translates to: HALTALTGLRNR*ETSVSSLVSMV
Trigger: CACCATTGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562984.5
CDS TCA 72 bp TCAGAGGTGTCAGACACTAGGTCATCTCTGGCTTCTTaGGGGCAGCAAAGCAGGGGGAATGTGACTGAGACG +
Preference number: 6 (lower is better)
Translates to: SEVSDTRSSLAS*GQQSRGNVTET
Trigger: CGTCTCAGTCACATTCCCCCTGCTTTGCTGCCCTCAAGAAGCCAGAGATGACCTAGTGTCTGACACCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CAA 72 bp CTCAAACACCTTGTTGATGTCGTCCACGCTCTGCACTaGGAACTCAGTCAGCCCTGGTACATACAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LKHLVDVVHALH*ELSQPWYIQLP
Trigger: GGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS CAA 90 bp TGTAGGAAGAATGCTGAATGCATGAGGGGCCAGCCAGAGCAGAACTaGTGGATGAGGTTGGTAAGCAGAGACAGAAAGGGTGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: CRKNAECMRGQPEQN*WMRLVSRDRKGGGA
Trigger: AGCCCCACCACCCTTTCTGTCTCTGCTTACCAACCTCATCCACAAGTTCTGCTCTGGCTGGCCCCTCATGCATTCAGCATTCTTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS TCA 72 bp CACGCCCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATACTTCTCA +
Preference number: 6 (lower is better)
Translates to: HALTALTGLRNR*ETSVSSLVYFS
Trigger: TGAGAAGTATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565481.5
CDS GCA 72 bp GCCCAGCTGGCACATGGCACAGCCAGAATAGAATCCTaGTCACGGGATTCCAAATCCAAAACTCTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: AQLAHGTARIES*SRDSKSKTLPV
Trigger: TACTGGGAGAGTTTTGGATTTGGAATCCCGTGAGCAGGATTCTATTCTGGCTGTGCCATGTGCCAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563295.1
CDS GCA 72 bp CCAGCCAGCCCAGGTCTTTGTGTTTTCTCAGCTGTCTaGTTCCAAGGCGGCCTCTTACCATCACAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: PASPGLCVFSAV*FQGGLLPSQKE
Trigger: TTCTTTCTGTGATGGTAAGAGGCCGCCTTGGAAGCAGACAGCTGAGAAAACACAAAGACCTGGGCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS CCA 72 bp TCAAACACCTTGTTGATGTCGTCCACGCTCTGCACTTaGAACTCAGTCAGCCCTGGTACATACAGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SNTLLMSSTLCT*NSVSPGTYSCP
Trigger: TGGGCAGCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS CCA 72 bp CACGGCACCATGGAAAACAAGGCAGAGTGTACCCCCTaGCGGGCTTTGCTTAGAGAGGCAAAGTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: HGTMENKAECTP*RALLREAKFRI
Trigger: AATTCTGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGCCTTGTTTTCCATGGTGCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 72 bp AACAGCAGTGTGAGAAAGCAGCCGATCAGAAGCCAGTaGTGGATAGGGCTGGAAACACGGCACCATGGAAAA +
Preference number: 6 (lower is better)
Translates to: NSSVRKQPIRSQ*WIGLETRHHGK
Trigger: TTTTCCATGGTGCCGTGTTTCCAGCCCTATCCACCACTGGCTTCTGATCGGCTGCTTTCTCACACTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS GCA 72 bp CCAAACTCAAACACCTTGTTGATGTCGTCCACGCTCTaGACTTGGAACTCAGTCAGCCCTGGTACATACAGC +
Preference number: 6 (lower is better)
Translates to: PNSNTLLMSSTL*TWNSVSPGTYS
Trigger: GCTGTATGTACCAGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS CCA 72 bp TCGTTCAGGTTGGTGAACTCGGTCGTGCGATTAGTGTaGCCAAACTCAAACACCTTGTTGATGTCGTCCACG +
Preference number: 6 (lower is better)
Translates to: SFRLVNSVVRLV*PNSNTLLMSST
Trigger: CGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCACGACCGAGTTCACCAACCTGAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000379655.8
ENST00000421376.6
ENST00000445690.7
ENST00000465878.6
ENST00000540079.6
ENST00000541240.5
ENST00000543930.5
ENST00000562903.5
ENST00000565270.1
CDS CCA 72 bp CACATGGCTGGGGAGGCCTCAGGAAACTTACAATCCTaGCAGAAGGAGGAGGAGACACAAAGCATGTCTTTT +
Preference number: 6 (lower is better)
Translates to: HMAGEASGNLQS*QKEEETQSMSF
Trigger: AAAAGACATGCTTTGTGTCTCCTCCTCCTTCTGCCAGGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000564136.5
CDS CAA 72 bp AATGCTGAATGCATGAGGGGCCAGCCAGAGCAGAACTaGTGGATGAGGTTGGTAAGCAGAGACAGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: NAECMRGQPEQN*WMRLVSRDRKG
Trigger: ACCCTTTCTGTCTCTGCTTACCAACCTCATCCACAAGTTCTGCTCTGGCTGGCCCCTCATGCATTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623271.1
CDS TCA 72 bp GGCTTTGCAGTCTTTCTAAATGAGAATCCTGATGGCTaGAGAAGGCGGATGGTGGAGGGTGACCTAACAGAA +
Preference number: 6 (lower is better)
Translates to: GFAVFLNENPDG*RRRMVEGDLTE
Trigger: TTCTGTTAGGTCACCCTCCACCATCCGCCTTCTTCAGCCATCAGGATTCTCATTTAGAAAGACTGCAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565684.5
CDS TCA 72 bp AATTACCTGACAGCTCTGACTGGGCTTAGGAACCGGTaGGAAACCTCAGTCTCATCTCTGGTATCAATGGTG +
Preference number: 6 (lower is better)
Translates to: NYLTALTGLRNR*ETSVSSLVSMV
Trigger: CACCATTGATACCAGAGATGAGACTGAGGTTTCTCACCGGTTCCTAAGCCCAGTCAGAGCTGTCAGGTAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565871.1
CDS GCA 72 bp GTCCATTCTTACAACAGATCCACCCCCAAACTGCAATaGGACATTTGTGAGCCCCAGTTTAGAGACTGGGAA +
Preference number: 6 (lower is better)
Translates to: VHSYNRSTPKLQ*DICEPQFRDWE
Trigger: TTCCCAGTCTCTAAACTGGGGCTCACAAATGTCGCATTGCAGTTTGGGGGTGGATCTGTTGTAAGAATGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CAA 72 bp CGAGATGATATATGCGAAGGCAGGGATTTTTGTCTGTaGTGTTCAGCACTGTACTCCCAGTGCCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: RDDICEGRDFCL*CSALYSQCLEQ
Trigger: CTGTTCCAGGCACTGGGAGTACAGTGCTGAACACAACAGACAAAAATCCCTGCCTTCGCATATATCATCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000623271.1
CDS CAA 90 bp AGGATTAAACGAGATGATATATGCGAAGGCAGGGATTTTTGTCTGTaGTGTTCAGCACTGTACTCCCAGTGCCTGGAACAGTGCCTGGTA +
Preference number: 6 (lower is better)
Translates to: RIKRDDICEGRDFCL*CSALYSQCLEQCLV
Trigger: TACCAGGCACTGTTCCAGGCACTGGGAGTACAGTGCTGAACACAACAGACAAAAATCCCTGCCTTCGCATATATCATCTCGTTTAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000623271.1
CDS GCA 72 bp TTTCTGTCCATTCTTACAACAGATCCACCCCCAAACTaGAATGCGACATTTGTGAGCCCCAGTTTAGAGACT +
Preference number: 6 (lower is better)
Translates to: FLSILTTDPPPN*NATFVSPSLET
Trigger: AGTCTCTAAACTGGGGCTCACAAATGTCGCATTGCAGTTTGGGGGTGGATCTGTTGTAAGAATGGACAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000543930.5
ENST00000562903.5
ENST00000563295.1
ENST00000564136.5
ENST00000567479.1
ENST00000569619.5
CDS CCA 72 bp TGGCTAATGAGCTTCTCCTTCAGGTGTTCTACCTGCTaGGTAACCTTGGACAAGTCTCTTAAGTTCTCTATG +
Preference number: 6 (lower is better)
Translates to: WLMSFSFRCSTC*VTLDKSLKFSM
Trigger: CATAGAGAACTTAAGAGACTTGTCCAAGGTTACCCAGCAGGTAGAACACCTGAAGGAGAAGCTCATTAGCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562903.5
CDS GCA 72 bp ATGGAAGCTGTCTCGAGGATTAAACGAGATGATATATaGGAAGGCAGGGATTTTTGTCTGTTGTGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: MEAVSRIKRDDI*EGRDFCLLCSA
Trigger: TGCTGAACACAACAGACAAAAATCCCTGCCTTCGCATATATCATCTCGTTTAATCCTCGAGACAGCTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562903.5
ENST00000623271.1