Pregenerated sensors for KIFC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204197Ensembl transcript IDs: ENST00000374523.8, ENST00000411963.1, ENST00000417146.1, ENST00000426791.1, ENST00000428849.7, ENST00000448818.6, ENST00000450504.1, ENST00000467671.1, ENST00000480346.1, ENST00000486695.1, ENST00000492385.1, ENST00000492999.1, ENST00000494554.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCAGGCCTCGGCTGGAGTaGTCCCCAGAAATCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PGEQCLRYLQNLSAQMCSRPRLE*SPEICS Trigger: GCTACAGATTTCTGGGGAGCACTCCAGCCGAGGCCT...GGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CCA 90 bp | CCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCCTGCCCTAGAAGACGATGACCGTTCATTCTaGGCTGTGCGGGCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PQIPAKPFCTNVLPALEDDDRSF*AVRATA Trigger: GGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATC...GTCTTCTAGGGCAGGGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR GCA 90 bp | GAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCGTTCATTCTGGGCTGTaGGGGCCACAGCCCGATTCT | + |
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Preference number: 4 (lower is better) Translates to: EPGEQCLRYLQNLSAQMCVHSGL*GPQPDS Trigger: AGAATCGGGCTGTGGCCCGCACAGCCCAGAATGAAC...GCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCCTGCAAAGCGTAGAGAGTTaGGGGACTCGGAGACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GEQCLRYLQNLSAQMCSLQSVES*GTRRRS Trigger: AGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTG...CAGGGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCGCAGGTAGGTCAGTTTaGTGTTCCGGTAAGGCACGT | + |
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Preference number: 4 (lower is better) Translates to: PGEQCLRYLQNLSAQMCSAGRSV*CSGKAR Trigger: ACGTGCCTTACCGGAACAGCAAACTGACCTACCTGC...GGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCAAAAATGGAACCAGGTaGGCAGTGCCTCAGATACCT | + |
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Preference number: 4 (lower is better) Translates to: PGEQCLRYLQNLSAQMCSKNGTR*AVPQIP Trigger: AGGTATCTGAGGCACTGCTCACCTGGTTCCATTTTT...GGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCCAAAAGGGATTGGAATaGAGAAGCCTACAACCACCC | + |
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Preference number: 4 (lower is better) Translates to: PGEQCLRYLQNLSAQMCSQKGLE*RSLQPP Trigger: GGGTGGTTGTAGGCTTCTCCATTCCAATCCCTTTTG...GGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR GCA 90 bp | AACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCACAAATGTGCTCCCTaGCCTAGAAGACAAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NQVSSASDTCKTFLHKCAHKCAP*PRRQKG Trigger: TCCCTTTTGTCTTCTAGGGCAGGGAGCACATTTGTG...AGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CCA 90 bp | TTAAAAATGGAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCAAGCTGGAATACACTGTaGCTGCGTGATGACCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LKMEPGEQCLRYLQNLSASWNTL*LRDDRS Trigger: TGAACGGTCATCACGCAGCCACAGTGTATTCCAGCT...TGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTCCATTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CCA 90 bp | TCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCCTGCCCTAGAAGACAACCAGAAATCTGTAGCTaGAATACACTGTGGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: SDTCKTFLHKCAPCPRRQPEICS*NTLWLR Trigger: ACGCAGCCACAGTGTATTCCAGCTACAGATTTCTGG...TTGTCTTCTAGGGCAGGGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CCA 90 bp | TTAAAAATGGAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCAGTGGTAATCGCACCTTaGAGGCAAAGCGTAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LKMEPGEQCLRYLQNLSAVVIAP*RQSVES Trigger: ACTCTCTACGCTTTGCCTCCAAGGTGCGATTACCAC...TGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTCCATTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR GCA 90 bp | TTAAAAATGGAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCAGGAATACACTGTGGCTaGGTGATGACCGTTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LKMEPGEQCLRYLQNLSAGIHCG*VMTVHS Trigger: AGAATGAACGGTCATCACGCAGCCACAGTGTATTCC...TGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTCCATTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS CCA 90 bp | CCACCTCGGTCCCACACGCGCCGGGGGAATGCAGTGGAAGAGAACTaGGTGCCGGGGATCCTGGGACTCGCGTTCTCTCGCCCGCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: PPRSHTRRGNAVEEN*VPGILGLAFSRPLA Trigger: CGCGAGCGGGCGAGAGAACGCGAGTCCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGACCGAGGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS GCA 90 bp | CTCGGTCCCACACGCGCCGGGGGAATGCAGTGGAAGAGAACTGGGTaGCGGGGATCCTGGGACTCGCGTTCTCTCGCCCGCTCGCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LGPTRAGGMQWKRTG*RGSWDSRSLARSRS Trigger: GCTTCGCGAGCGGGCGAGAGAACGCGAGTCCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGACCGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS TCA 90 bp | TCCTCACTCCCTGGCCCTGCACGGCGAATCTCACACTCGCCCCCTTaGCCCTTCCGGGTTCCAGTGGCCAGCAGGTCCCGGACAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SSLPGPARRISHSPP*PFRVPVASRSRTVS Trigger: TGAGACTGTCCGGGACCTGCTGGCCACTGGAACCCGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGGAGTGAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 90 bp | CTCTGCGGATCCATGTCCACCTCGGTCCCACACGCGCCGGGGGAATaGAGTGGAAGAGAACTGGGTGCCGGGGATCCTGGGACTCGCGTT | + |
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Preference number: 5 (lower is better) Translates to: LCGSMSTSVPHAPGE*SGRELGAGDPGTRV Trigger: AACGCGAGTCCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGACCGAGGTGGACATGGATCCGCAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 90 bp | CGGATCCATGTCCACCTCGGTCCCACACGCGCCGGGGGAATGCAGTaGAAGAGAACTGGGTGCCGGGGATCCTGGGACTCGCGTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RIHVHLGPTRAGGMQ*KRTGCRGSWDSRSL Trigger: GAGAGAACGCGAGTCCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGACCGAGGTGGACATGGATCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS GCA 90 bp | GCCACTTTTGAATTCCAACGGCCACCACCCACTCTCACCGCGCTCTaGACGCAGGGACCAATCGTCGCTGTCGCCACAGCCGAGGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: ATFEFQRPPPTLTAL*TQGPIVAVATAEGQ Trigger: TTGGCCCTCGGCTGTGGCGACAGCGACGATTGGTCCCTGCGTGCAGAGCGCGGTGAGAGTGGGTGGTGGCCGTTGGAATTCAAAAGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000417146.1 ENST00000448818.6 |
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| CDS TCA 90 bp | CCGGCAGGACAGGGCGGACCCGGCAGAATACACGGATGTTGCCCTTaGGTTCCTGCAGCTGGTTGTGCAGTCGCCGGCGCTCCATTTCTA | + |
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Preference number: 5 (lower is better) Translates to: PAGQGGPGRIHGCCP*VPAAGCAVAGAPFL Trigger: TAGAAATGGAGCGCCGGCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTGCCGGGTCCGCCCTGTCCTGCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 90 bp | GAATACCCGGTCAAAGGAAAAATCATGGCGAGTTGGGGGAGCTGGTaGCCCACTCAGGGTCCCACGCCGCTCGTCAGACCGGGAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: EYPVKGKIMASWGSW*PTQGPTPLVRPGEA Trigger: AGCCTCTCCCGGTCTGACGAGCGGCGTGGGACCCTGAGTGGGGCACCAGCTCCCCCAACTCGCCATGATTTTTCCTTTGACCGGGTATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 90 bp | GCTGGAATACACTGTGGCTGCGTGATGACCGTTCATTCTGGGCTGTaGGGGCCACAGCCCGATTCTGGCGGGCCAGATGAAGCAGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: AGIHCGCVMTVHSGL*GPQPDSGGPDEAGR Trigger: ACGCCCTGCTTCATCTGGCCCGCCAGAATCGGGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTGTATTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 90 bp | CCTGGGCCACAGTCTCCTGCCGCAGAGATGCCACCTCTGCTTGGCTaGTTGACAGGGCTGCTTCTGATGTCTGCAGCCTCCTCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PGPQSPAAEMPPLLG*LTGLLLMSAASSPS Trigger: AGAAGGAGAGGAGGCTGCAGACATCAGAAGCAGCCCTGTCAAGCAGCCAAGCAGAGGTGGCATCTCTGCGGCAGGAGACTGTGGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 90 bp | GACATATCGAGCATTGGTGACAGTGAGCTCCTCACTCCCTGGCCCTaGACGGCGAATCTCACACTCGCCCCCTTGACCCTTCCGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: DISSIGDSELLTPWP*TANLTLAPLTLPGS Trigger: GGAACCCGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGGAGTGAGGAGCTCACTGTCACCAATGCTCGATATGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 90 bp | GACAGGGACATATCGAGCATTGGTGACAGTGAGCTCCTCACTCCCTaGCCCTGCACGGCGAATCTCACACTCGCCCCCTTGACCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: DRDISSIGDSELLTP*PCTANLTLAPLTLP Trigger: CGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGGAGTGAGGAGCTCACTGTCACCAATGCTCGATATGTCCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS TCA 90 bp | TCCTGCAGCTGGTTGTGCAGTCGCCGGCGCTCCATTTCTAGCCCATaGAGACGTTCTTCCCGCTCAGTCAGTAAGGCTGCCTGGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SCSWLCSRRRSISSP*RRSSRSVSKAAWAT Trigger: TGTGGCCCAGGCAGCCTTACTGACTGAGCGGGAAGAACGTCTTCATGGGCTAGAAATGGAGCGCCGGCGACTGCACAACCAGCTGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 90 bp | CCTCGGCTGGAGTGCTCCCCAGAAATCTGTAGCTGGAATACACTGTaGCTGCGTGATGACCGTTCATTCTGGGCTGTGCGGGCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PRLECSPEICSWNTL*LRDDRSFWAVRATA Trigger: GGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTGTATTCCAGCTACAGATTTCTGGGGAGCACTCCAGCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS GCA 90 bp | GGCTGGAGTGCTCCCCAGAAATCTGTAGCTGGAATACACTGTGGCTaGGTGATGACCGTTCATTCTGGGCTGTGCGGGCCACAGCCCGAT | + |
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Preference number: 5 (lower is better) Translates to: GWSAPQKSVAGIHCG*VMTVHSGLCGPQPD Trigger: ATCGGGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTGTATTCCAGCTACAGATTTCTGGGGAGCACTCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS GCA 90 bp | AGCTCCAGGACACAAGCACGCAAGTTCTTCAGCTCCTGTTGGCCCTaGTCAGCCTGGGCCTGTACCTTGGCTAAATGCCCCTCCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: SSRTQARKFFSSCWP*SAWACTLAKCPSSV Trigger: AACACTGGAGGGGCATTTAGCCAAGGTACAGGCCCAGGCTGAGCAGGGCCAACAGGAGCTGAAGAACTTGCGTGCTTGTGTCCTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 90 bp | AGGCCTCTTGTCCGTTTCTTCTCAGGCTCCAGGCCATCTTCCATCTaGTCAGGCCTCCTCTTGAGTCTGCTTCCTGAGAGAGGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPLVRFFSGSRPSSI*SGLLLSLLPERGSW Trigger: CCAGCTGCCTCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGATGGAAGATGGCCTGGAGCCTGAGAAGAAACGGACAAGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS TCA 90 bp | CAGGCCATCTTCCATCTGGTCAGGCCTCCTCTTGAGTCTGCTTCCTaGGAGAGGCAGCTGGGAAGGGGCCTTAATCAGAGGTCTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QAIFHLVRPPLESAS*ERQLGRGLNQRSLQ Trigger: CTGAAGAGACCTCTGATTAAGGCCCCTTCCCAGCTGCCTCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGATGGAAGATGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 90 bp | CTGCACAAATGTGCTCCCTGCCCTAGAAGACAAAAGGGATTGGAATaGAGAAGCCTACAACCACCCACGGGTCCTGACAAGGCTGACGGG | + |
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Preference number: 5 (lower is better) Translates to: LHKCAPCPRRQKGLE*RSLQPPTGPDKADG Trigger: CCCGTCAGCCTTGTCAGGACCCGTGGGTGGTTGTAGGCTTCTCCATTCCAATCCCTTTTGTCTTCTAGGGCAGGGAGCACATTTGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS GCA 90 bp | AGTGAGGGATGGAACTCTTGGGTGGGATGTGGTAATTTTGGTCGTTaGACCCAGGCCTCTTGTCCGTTTCTTCTCAGGCTCCAGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: SEGWNSWVGCGNFGR*TQASCPFLLRLQAI Trigger: GATGGCCTGGAGCCTGAGAAGAAACGGACAAGAGGCCTGGGTGCAACGACCAAAATTACCACATCCCACCCAAGAGTTCCATCCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 90 bp | ATCTGGTCAGGCCTCCTCTTGAGTCTGCTTCCTGAGAGAGGCAGCTaGGAAGGGGCCTTAATCAGAGGTCTCTTCAGTTCTATGTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: IWSGLLLSLLPERGS*EGALIRGLFSSMFP Trigger: GGGGAACATAGAACTGAAGAGACCTCTGATTAAGGCCCCTTCCCAGCTGCCTCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 90 bp | TGGCCTTGTGTCTGTGGCACTGTAGTGAGGGATGGAACTCTTGGGTaGGATGTGGTAATTTTGGTCGTTGCACCCAGGCCTCTTGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: WPCVCGTVVRDGTLG*DVVILVVAPRPLVR Trigger: ACGGACAAGAGGCCTGGGTGCAACGACCAAAATTACCACATCCCACCCAAGAGTTCCATCCCTCACTACAGTGCCACAGACACAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 90 bp | TTAGGTCACATAACTGACCCTTTAAGTCCCAGGCTGGACGTTTGCTaGGTTTCTTCCCTCCTGCCATGGGAGGAACACCTGATGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LGHITDPLSPRLDVC*VSSLLPWEEHLMCQ Trigger: CTGGCACATCAGGTGTTCCTCCCATGGCAGGAGGGAAGAAACCCAGCAAACGTCCAGCCTGGGACTTAAAGGGTCAGTTATGTGACCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 ENST00000467671.1 ENST00000486695.1 ENST00000492999.1 |
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| CDS CCA 90 bp | CCTTTCTGCACAAATGTGCTCCCTGCCCTAGAAGACAAAAGGGATTaGAATGGAGAAGCCTACAACCACCCACGGGTCCTGACAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PFCTNVLPALEDKRD*NGEAYNHPRVLTRL Trigger: CAGCCTTGTCAGGACCCGTGGGTGGTTGTAGGCTTCTCCATTCCAATCCCTTTTGTCTTCTAGGGCAGGGAGCACATTTGTGCAGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS GCA 90 bp | CATTTAGGTCACATAACTGACCCTTTAAGTCCCAGGCTGGACGTTTaGTGGGTTTCTTCCCTCCTGCCATGGGAGGAACACCTGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: HLGHITDPLSPRLDV*WVSSLLPWEEHLMC Trigger: GCACATCAGGTGTTCCTCCCATGGCAGGAGGGAAGAAACCCAGCAAACGTCCAGCCTGGGACTTAAAGGGTCAGTTATGTGACCTAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 ENST00000467671.1 ENST00000486695.1 ENST00000492999.1 |
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| CDS-3UTR CAA 90 bp | ATGGAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGGGCACGTGGGACTCCTaGTTGCTCAGGGCCATGATA | + |
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Preference number: 5 (lower is better) Translates to: MEPGEQCLRYLQNLSAQMGTWDS*LLRAMI Trigger: TATCATGGCCCTGAGCAACAAGGAGTCCCACGTGCC...CATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTCCCTGCCCTAGAAGACGGTGGTAATCGCACCTaGGAGGCAAAGCGTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PQIPAKPFCTNVLPALEDGGNRT*EAKRRE Trigger: CTCTCTACGCTTTGCCTCCAAGGTGCGATTACCACC...GTCTTCTAGGGCAGGGAGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS TCA 90 bp | CACACACACACACAGATCTGGATCCGTCTTCACTTCCTGTTGGCCTaGGCAGTACCAATAACACACTGGTTCACCTTGGAGGCAAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: HTHTQIWIRLHFLLA*AVPITHWFTLEAKR Trigger: ACGCTTTGCCTCCAAGGTGAACCAGTGTGTTATTGGTACTGCTCAGGCCAACAGGAAGTGAAGACGGATCCAGATCTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS-3UTR CAA 90 bp | AACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGTGCTACGTGGGACTCCTTGTaGCTCAGGGCCATGATAACC | + |
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Preference number: 5 (lower is better) Translates to: NQVSSASDTCKTFLHKCATWDSL*LRAMIT Trigger: GGTTATCATGGCCCTGAGCAACAAGGAGTCCCACGT...AGCACATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS-3UTR CAA 90 bp | ATGGAACCAGGTGAGCAGTGCCTCAGATACCTGCAAAACCTTTCTGCACAAATGGCAAAGCGTAGAGAGTaGAGGGACTCGGAGACGTTC | + |
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Preference number: 5 (lower is better) Translates to: MEPGEQCLRYLQNLSAQMAKRRE*RDSETF Trigger: GAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGC...CATTTGTGCAGAAAGGTTTTGCAGGTATCTGAGGCACTGCTCACCTGGTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494554.2 |
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| CDS TCA 90 bp | GTCCTCTCACGGCACCGTTTTAGTTCTGCATTTAGGTCACATAACTaGCCCTTTAAGTCCCAGGCTGGACGTTTGCTGGGTTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSRHRFSSAFRSHN*PFKSQAGRLLGFFP Trigger: AGGGAAGAAACCCAGCAAACGTCCAGCCTGGGACTTAAAGGGTCAGTTATGTGACCTAAATGCAGAACTAAAACGGTGCCGTGAGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 ENST00000467671.1 ENST00000486695.1 ENST00000492999.1 |
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| CDS CCA 90 bp | AAGCATGGCAATCTCTTCAAACACTTCATCCTGTCCACTTCCTGGTaGGAATACCCGGTCAAAGGAAAAATCATGGCGAGTTGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHGNLFKHFILSTSW*EYPVKGKIMASWGS Trigger: GCTCCCCCAACTCGCCATGATTTTTCCTTTGACCGGGTATTCCCACCAGGAAGTGGACAGGATGAAGTGTTTGAAGAGATTGCCATGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 90 bp | GACAAGCATGGCAATCTCTTCAAACACTTCATCCTGTCCACTTCCTaGTGGGAATACCCGGTCAAAGGAAAAATCATGGCGAGTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DKHGNLFKHFILSTS*WEYPVKGKIMASWG Trigger: CCCCCAACTCGCCATGATTTTTCCTTTGACCGGGTATTCCCACCAGGAAGTGGACAGGATGAAGTGTTTGAAGAGATTGCCATGCTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 90 bp | CAAAGATGCATACTGGATAGCCATCCAGGGCTGACTGGACAAGCATaGCAATCTCTTCAAACACTTCATCCTGTCCACTTCCTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QRCILDSHPGLTGQA*QSLQTLHPVHFLVG Trigger: TCCCACCAGGAAGTGGACAGGATGAAGTGTTTGAAGAGATTGCCATGCTTGTCCAGTCAGCCCTGGATGGCTATCCAGTATGCATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS TCA 72 bp | CCTGGCCCTGCACGGCGAATCTCACACTCGCCCCCTTaGCCCTTCCGGGTTCCAGTGGCCAGCAGGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPARRISHSPP*PFRVPVASRSR Trigger: CCGGGACCTGCTGGCCACTGGAACCCGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 72 bp | CCCTGGCCCTGCACGGCGAATCTCACACTCGCCCCCTaGACCCTTCCGGGTTCCAGTGGCCAGCAGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PWPCTANLTLAP*TLPGSSGQQVP Trigger: CGGGACCTGCTGGCCACTGGAACCCGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | GGCTCCCCCGGCAGGACAGGGCGGACCCGGCAGAATACACGGATGTaGCCCTTGAGTTCCTGCAGCTGGTTGTGCAGTCGCCGGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSPGRTGRTRQNTRM*PLSSCSWLCSRRRS Trigger: GGAGCGCCGGCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTGCCGGGTCCGCCCTGTCCTGCCGGGGGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | CTCCTCACTCCCTGGCCCTGCACGGCGAATCTCACACTCGCCCCCTaGACCCTTCCGGGTTCCAGTGGCCAGCAGGTCCCGGACAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLTPWPCTANLTLAP*TLPGSSGQQVPDSL Trigger: GAGACTGTCCGGGACCTGCTGGCCACTGGAACCCGGAAGGGTCAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGGAGTGAGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 72 bp | TCCATGTCCACCTCGGTCCCACACGCGCCGGGGGAATaGAGTGGAAGAGAACTGGGTGCCGGGGATCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SMSTSVPHAPGE*SGRELGAGDPG Trigger: CCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGACCGAGGTGGACATGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 72 bp | TCCCACACGCGCCGGGGGAATGCAGTGGAAGAGAACTaGGTGCCGGGGATCCTGGGACTCGCGTTCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SHTRRGNAVEEN*VPGILGLAFSR Trigger: GCGAGAGAACGCGAGTCCCAGGATCCCCGGCACCCAGTTCTCTTCCACTGCATTCCCCCGGCGCGTGTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 72 bp | ACGCCGCTCGTCAGACCGGGAGAGGCTAAGGCGGGTTaGAGGATCAGAGGGCCCACCAGGGCCAGAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TPLVRPGEAKAG*RIRGPTRARGK Trigger: TTTCCCTCTGGCCCTGGTGGGCCCTCTGATCCTCCAACCCGCCTTAGCCTCTCCCGGTCTGACGAGCGGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 72 bp | CCGCCACCCGAAGCCACACCCCGCCCGACAGGCGCCTaGTCTTTTCTGTTTCGCAGGCGCAGGAGAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPEATPRPTGA*SFLFRRRRRGR Trigger: CCTACCTCTCCTGCGCCTGCGAAACAGAAAAGACAAGGCGCCTGTCGGGCGGGGTGTGGCTTCGGGTGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000417146.1 ENST00000448818.6 |
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| CDS GCA 72 bp | GAATTCCAACGGCCACCACCCACTCTCACCGCGCTCTaGACGCAGGGACCAATCGTCGCTGTCGCCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EFQRPPPTLTAL*TQGPIVAVATA Trigger: GGCTGTGGCGACAGCGACGATTGGTCCCTGCGTGCAGAGCGCGGTGAGAGTGGGTGGTGGCCGTTGGAATTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000417146.1 ENST00000448818.6 |
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| CDS TCA 72 bp | CAGGGCGGACCCGGCAGAATACACGGATGTTGCCCTTaGGTTCCTGCAGCTGGTTGTGCAGTCGCCGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGGPGRIHGCCP*VPAAGCAVAGA Trigger: AGCGCCGGCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTGCCGGGTCCGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | CAGCGTTCTCCGCCACCCGAAGCCACACCCCGCCCGACAGGCGCCTaGTCTTTTCTGTTTCGCAGGCGCAGGAGAGGTAGGCGGATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: QRSPPPEATPRPTGA*SFLFRRRRRGRRIN Trigger: ATTAATCCGCCTACCTCTCCTGCGCCTGCGAAACAGAAAAGACAAGGCGCCTGTCGGGCGGGGTGTGGCTTCGGGTGGCGGAGAACGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000417146.1 ENST00000448818.6 |
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| CDS TCA 72 bp | GCTGTGCGGGCCACAGCCCGATTCTGGCGGGCCAGATaGAGCAGGGCGTCCACTTCTTTCTCACAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: AVRATARFWRAR*SRASTSFSQET Trigger: TGTCTCCTGTGAGAAAGAAGTGGACGCCCTGCTTCATCTGGCCCGCCAGAATCGGGCTGTGGCCCGCACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 72 bp | GTCAAAGGAAAAATCATGGCGAGTTGGGGGAGCTGGTaGCCCACTCAGGGTCCCACGCCGCTCGTCAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: VKGKIMASWGSW*PTQGPTPLVRP Trigger: CGGTCTGACGAGCGGCGTGGGACCCTGAGTGGGGCACCAGCTCCCCCAACTCGCCATGATTTTTCCTTTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 72 bp | CACTGTGGCTGCGTGATGACCGTTCATTCTGGGCTGTaGGGGCCACAGCCCGATTCTGGCGGGCCAGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: HCGCVMTVHSGL*GPQPDSGGPDE Trigger: TTCATCTGGCCCGCCAGAATCGGGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 72 bp | TGGAATACACTGTGGCTGCGTGATGACCGTTCATTCTaGGCTGTGCGGGCCACAGCCCGATTCTGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WNTLWLRDDRSF*AVRATARFWRA Trigger: GGCCCGCCAGAATCGGGCTGTGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTGTATTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 72 bp | GGCAGGACAGGGCGGACCCGGCAGAATACACGGATGTaGCCCTTGAGTTCCTGCAGCTGGTTGTGCAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTGRTRQNTRM*PLSSCSWLCSR Trigger: GCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTGCCGGGTCCGCCCTGTCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | GGGCCACAGTCTCCTGCCGCAGAGATGCCACCTCTGCTTGGCTGCTaGACAGGGCTGCTTCTGATGTCTGCAGCCTCCTCTCCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPQSPAAEMPPLLGC*TGLLLMSAASSPSP Trigger: AGGAGAAGGAGAGGAGGCTGCAGACATCAGAAGCAGCCCTGTCAAGCAGCCAAGCAGAGGTGGCATCTCTGCGGCAGGAGACTGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 72 bp | GGCTCCAGGCCATCTTCCATCTGGTCAGGCCTCCTCTaGAGTCTGCTTCCTGAGAGAGGCAGCTGGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GSRPSSIWSGLL*SLLPERGSWEG Trigger: CCCTTCCCAGCTGCCTCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGATGGAAGATGGCCTGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 72 bp | ATATCGAGCATTGGTGACAGTGAGCTCCTCACTCCCTaGCCCTGCACGGCGAATCTCACACTCGCCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ISSIGDSELLTP*PCTANLTLAPL Trigger: CAAGGGGGCGAGTGTGAGATTCGCCGTGCAGGGCCAGGGAGTGAGGAGCTCACTGTCACCAATGCTCGATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | AGGGCGTCCACTTCTTTCTCACAGGAGACAGGGACATATCGAGCATaGGTGACAGTGAGCTCCTCACTCCCTGGCCCTGCACGGCGAATC | + |
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Preference number: 6 (lower is better) Translates to: RASTSFSQETGTYRA*VTVSSSLPGPARRI Trigger: GATTCGCCGTGCAGGGCCAGGGAGTGAGGAGCTCACTGTCACCAATGCTCGATATGTCCCTGTCTCCTGTGAGAAAGAAGTGGACGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | AACCACCCACGGGTCCTGACAAGGCTGACGGGTGGTAATCGCACCTaGGAGGCAAAGCGTAGAGAGTTGAGGGACTCGGAGACGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NHPRVLTRLTGGNRT*EAKRRELRDSETFS Trigger: AGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGCGATTACCACCCGTCAGCCTTGTCAGGACCCGTGGGTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS TCA 72 bp | TGGTTGTGCAGTCGCCGGCGCTCCATTTCTAGCCCATaGAGACGTTCTTCCCGCTCAGTCAGTAAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLCSRRRSISSP*RRSSRSVSKAA Trigger: GGCAGCCTTACTGACTGAGCGGGAAGAACGTCTTCATGGGCTAGAAATGGAGCGCCGGCGACTGCACAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 72 bp | ACCCGGCAGAATACACGGATGTTGCCCTTGAGTTCCTaGAGCTGGTTGTGCAGTCGCCGGCGCTCCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TRQNTRMLPLSS*SWLCSRRRSIS Trigger: AGAAATGGAGCGCCGGCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTGCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS GCA 72 bp | GCTCCCCAGAAATCTGTAGCTGGAATACACTGTGGCTaGGTGATGACCGTTCATTCTGGGCTGTGCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: APQKSVAGIHCG*VMTVHSGLCGP Trigger: TGGCCCGCACAGCCCAGAATGAACGGTCATCACGCAGCCACAGTGTATTCCAGCTACAGATTTCTGGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS CCA 72 bp | CAGAATACACGGATGTTGCCCTTGAGTTCCTGCAGCTaGTTGTGCAGTCGCCGGCGCTCCATTTCTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QNTRMLPLSSCS*LCSRRRSISSP Trigger: TGGGCTAGAAATGGAGCGCCGGCGACTGCACAACCAGCTGCAGGAACTCAAGGGCAACATCCGTGTATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 72 bp | GTCCGTTTCTTCTCAGGCTCCAGGCCATCTTCCATCTaGTCAGGCCTCCTCTTGAGTCTGCTTCCTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VRFFSGSRPSSI*SGLLLSLLPER Trigger: TCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGATGGAAGATGGCCTGGAGCCTGAGAAGAAACGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CAA 90 bp | GGCACTGTAGTGAGGGATGGAACTCTTGGGTGGGATGTGGTAATTTaGGTCGTTGCACCCAGGCCTCTTGTCCGTTTCTTCTCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTVVRDGTLGWDVVI*VVAPRPLVRFFSGS Trigger: GGAGCCTGAGAAGAAACGGACAAGAGGCCTGGGTGCAACGACCAAAATTACCACATCCCACCCAAGAGTTCCATCCCTCACTACAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS GCA 72 bp | CACATAACTGACCCTTTAAGTCCCAGGCTGGACGTTTaGTGGGTTTCTTCCCTCCTGCCATGGGAGGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: HITDPLSPRLDV*WVSSLLPWEEH Trigger: GTGTTCCTCCCATGGCAGGAGGGAAGAAACCCAGCAAACGTCCAGCCTGGGACTTAAAGGGTCAGTTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 ENST00000467671.1 ENST00000486695.1 ENST00000492999.1 |
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| CDS CAA 72 bp | ACTTCTTTCTCACAGGAGACAGGGACATATCGAGCATaGGTGACAGTGAGCTCCTCACTCCCTGGCCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSFSQETGTYRA*VTVSSSLPGPA Trigger: TGCAGGGCCAGGGAGTGAGGAGCTCACTGTCACCAATGCTCGATATGTCCCTGTCTCCTGTGAGAAAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 72 bp | GGTGGTAATCGCACCTTGGAGGCAAAGCGTAGAGAGTaGAGGGACTCGGAGACGTTCTCTTCCAGTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGNRTLEAKRRE*RDSETFSSSGE Trigger: TTCTCCACTGGAAGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGCGATTACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS CAA 90 bp | AGGCTGACGGGTGGTAATCGCACCTTGGAGGCAAAGCGTAGAGAGTaGAGGGACTCGGAGACGTTCTCTTCCAGTGGAGAAATGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RLTGGNRTLEAKRRE*RDSETFSSSGEMFT Trigger: TGTGAACATTTCTCCACTGGAAGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGCGATTACCACCCGTCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS TCA 72 bp | CACACTGGTTCACCTTGGAGGCAAAGCGTAGAGAGTTaGGGGACTCGGAGACGTTCTCTTCCAGTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HTGSPWRQSVES*GTRRRSLPVEK Trigger: TTTCTCCACTGGAAGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGAACCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS TCA 72 bp | GTGGTAATCGCACCTTGGAGGCAAAGCGTAGAGAGTTaGGGGACTCGGAGACGTTCTCTTCCAGTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VVIAPWRQSVES*GTRRRSLPVEK Trigger: TTTCTCCACTGGAAGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGCGATTACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS GCA 72 bp | TGGAACTCTTGGGTGGGATGTGGTAATTTTGGTCGTTaGACCCAGGCCTCTTGTCCGTTTCTTCTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WNSWVGCGNFGR*TQASCPFLLRL Trigger: GAGCCTGAGAAGAAACGGACAAGAGGCCTGGGTGCAACGACCAAAATTACCACATCCCACCCAAGAGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CCA 72 bp | GGTCTGGCCTTGTGTCTGTGGCACTGTAGTGAGGGATaGAACTCTTGGGTGGGATGTGGTAATTTTGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLALCLWHCSEG*NSWVGCGNFGR Trigger: ACGACCAAAATTACCACATCCCACCCAAGAGTTCCATCCCTCACTACAGTGCCACAGACACAAGGCCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CAA 72 bp | GTGAGGGATGGAACTCTTGGGTGGGATGTGGTAATTTaGGTCGTTGCACCCAGGCCTCTTGTCCGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRDGTLGWDVVI*VVAPRPLVRFF Trigger: GAAGAAACGGACAAGAGGCCTGGGTGCAACGACCAAAATTACCACATCCCACCCAAGAGTTCCATCCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000374523.8 ENST00000411963.1 ENST00000426791.1 ENST00000428849.7 ENST00000448818.6 ENST00000450504.1 |
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| CDS CAA 72 bp | ACACACTGGTTCACCTTGGAGGCAAAGCGTAGAGAGTaGAGGGACTCGGAGACGTTCTCTTCCAGTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: THWFTLEAKRRE*RDSETFSSSGE Trigger: TTCTCCACTGGAAGAGAACGTCTCCGAGTCCCTCAACTCTCTACGCTTTGCCTCCAAGGTGAACCAGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CAA 90 bp | ACCTTTCTGCACAAATGTGCTCCCTGCCCTAGAAGACAAAAGGGATaGGAATGGAGAAGCCTACAACCACCCACGGGTCCTGACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFLHKCAPCPRRQKG*EWRSLQPPTGPDKA Trigger: AGCCTTGTCAGGACCCGTGGGTGGTTGTAGGCTTCTCCATTCCAATCCCTTTTGTCTTCTAGGGCAGGGAGCACATTTGTGCAGAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000480346.1 ENST00000492385.1 ENST00000494554.2 |
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| CDS TCA 72 bp | ACACAGATCTGGATCCGTCTTCACTTCCTGTTGGCCTaGGCAGTACCAATAACACACTGGTTCACCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TQIWIRLHFLLA*AVPITHWFTLE Trigger: CTCCAAGGTGAACCAGTGTGTTATTGGTACTGCTCAGGCCAACAGGAAGTGAAGACGGATCCAGATCTGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 72 bp | GGCAATCTCTTCAAACACTTCATCCTGTCCACTTCCTaGTGGGAATACCCGGTCAAAGGAAAAATCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GNLFKHFILSTS*WEYPVKGKIMA Trigger: CGCCATGATTTTTCCTTTGACCGGGTATTCCCACCAGGAAGTGGACAGGATGAAGTGTTTGAAGAGATTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS TCA 72 bp | ATAGGCAAAGATGCATACTGGATAGCCATCCAGGGCTaGCTGGACAAGCATGGCAATCTCTTCAAACACTTC | + |
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Preference number: 6 (lower is better) Translates to: IGKDAYWIAIQG*LDKHGNLFKHF Trigger: GAAGTGTTTGAAGAGATTGCCATGCTTGTCCAGTCAGCCCTGGATGGCTATCCAGTATGCATCTTTGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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| CDS CCA 72 bp | AATCTCTTCAAACACTTCATCCTGTCCACTTCCTGGTaGGAATACCCGGTCAAAGGAAAAATCATGGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: NLFKHFILSTSW*EYPVKGKIMAS Trigger: ACTCGCCATGATTTTTCCTTTGACCGGGTATTCCCACCAGGAAGTGGACAGGATGAAGTGTTTGAAGAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374523.8 ENST00000428849.7 ENST00000448818.6 |
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