RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIFAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000075945

Ensembl transcript IDs: ENST00000361580.7, ENST00000367765.5, ENST00000367767.5, ENST00000474292.1, ENST00000490550.1, ENST00000538366.5

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTaGACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGC +
Preference number: 1 (lower is better)
Translates to: GSWEMLLSIKMWFDE*TMSVSTVLNRRQRG
Trigger: GCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR-3UTR TCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR CAA 90 bp AGTTTTGTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: SFVAHGKCYLASRCG*MSEQCQYQLYLTED
Trigger: GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCACAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR-3UTR TCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR-3UTR TCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: RPTITSTCIIRQRSKINPRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR TCA 72 bp GAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTaGACAATGTCAGTATCAACTGTACTTAACAGAAGA +
Preference number: 3 (lower is better)
Translates to: EMLLSIKMWFDE*TMSVSTVLNRR
Trigger: TCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACTGGCGTCCTCCCCTTaGATGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQLASSP*MAAAAA
Trigger: CGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTCGTCCTCCCCTTGCATaGCGGCAGCGGCAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGARPPLA*RQRQRR
Trigger: ACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACG...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACTGGCGTCCTCCCCTTaGATGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTLASSP*MAAAAA
Trigger: CGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAGCGGCGTGGAGAGGATaGGGTATCTTGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTAAWRG*GILRGR
Trigger: CCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGC...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACGTCCTCCCCTTGCATaGCGGCAGCGGCAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTRPPLA*RQRQRR
Trigger: ACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACCGTCCTCCCCTTGCATaGCGGCAGCGGCAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDRPPLA*RQRQRR
Trigger: ACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACG...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTACTGGCGTCCTCCCCTTaGATGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLLASSP*MAAAAA
Trigger: CGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAG...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAAGGGCGGAATCCATATaGTGTGGCAGGGCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTRAESI*CGRASK
Trigger: CTTGGACGCCCTGCCACAGCATATGGATTCCGCCCT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACTGTGGTTACCACGGTaGAGCCTCCAGCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQLWLPR*SLQLLP
Trigger: TGGGAGGAGCTGGAGGCTTCACCGTGGTAACCACAG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTGTGCCCCAAAACACTaGAGCGGCCCAGACCCGCCC +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTCAPKH*SGPDPP
Trigger: GGGCGGGTCTGGGCCGCTCCAGTGTTTTGGGGCACA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR CCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACATATTTCCGGGGACGGTaGCCAAAGTACCCTCACACC +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTYFRGR*PKYPHT
Trigger: GGTGTGAGGGTACTTTGGCCACCGTCCCCGGAAATA...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGCAGCGGCAGCGGCGTaGAGAGGATGGGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCAAAAA*RGWGIL
Trigger: CAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAAGGGCGGAATCCATATaGTGTGGCAGGGCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQRAESI*CGRASK
Trigger: CTTGGACGCCCTGCCACAGCATATGGATTCCGCCCT...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCATGTGCCCCAAAACACTaGAGCGGCCCAGACCCGCCC +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPCAPKH*SGPDPP
Trigger: GGGCGGGTCTGGGCCGCTCCAGTGTTTTGGGGCACA...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCGCAGCGGCAGCGGCGTaGAGAGGATGGGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTAAAAA*RGWGIL
Trigger: CAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGC...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATCTGTGGTTACCACGGTaGAGCCTCCAGCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDLWLPR*SLQLLP
Trigger: TGGGAGGAGCTGGAGGCTTCACCGTGGTAACCACAG...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTTGCCTAGGAGTGCAGTaGGCTTGGGAAGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGACLGVQ*AWEAVQ
Trigger: TTGGACTGCTTCCCAAGCTCACTGCACTCCTAGGCA...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACATCACTCTCATCCATCTaGCGACTCTCTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTSLSSI*RLSTIS
Trigger: GGAGATGGTAGAGAGTCGTCAGATGGATGAGAGTGA...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAACAGGGCGTCCAAGAATaGCAACTGGTTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKQGVQE*QLVGQS
Trigger: GCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTG...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATGCGGCGTGGAGAGGATaGGGTATCTTGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDAAWRG*GILRGR
Trigger: CCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGC...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACGCGGCGTGGAGAGGATaGGGTATCTTGAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDAAWRG*GILRGR
Trigger: CCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGC...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGCAGCGGCAGCGGCGTaGAGAGGATGGGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHAAAAA*RGWGIL
Trigger: CAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGAGGATGGGGTATCTTaGGAGGCAGGCGCGGTTATT +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCEDGVS*EAGAVI
Trigger: AATAACCGCGCCTGCCTCTCAAGATACCCCATCCTC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTACCATCTCCAGCCACTaGGAGTTATGCCAGCGAAAC +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGATISSH*ELCQRN
Trigger: GTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACTCCCACAGCTTCTGTaGCCCAAAACACTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTLPQLL*PKTLER
Trigger: CCGCTCCAGTGTTTTGGGGCACAGAAGCTGTGGGAG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR GCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGGGCGTCCAAGAATaGCAACTGGTTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCQGVQE*QLVGQS
Trigger: GCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTG...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGGCCGTCACGACGCATaGGCTTGCTCTGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSGRHDA*ACSAPL
Trigger: AAGAGGTGCAGAGCAAGCGCATGCGTCGTGACGGCC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538366.5
CDS-3UTR CCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTRMPTG*PKPSIP
Trigger: TGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKGIHML*QGVQEC
Trigger: GCATTCTTGGACGCCCTGCCACAGCATATGGATTCC...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATGCCTAGGAGTGCAGTaGGCTTGGGAAGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTCLGVQ*AWEAVQ
Trigger: TTGGACTGCTTCCCAAGCTCACTGCACTCCTAGGCA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTGCCTAGGAGTGCAGTaGGCTTGGGAAGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDCLGVQ*AWEAVQ
Trigger: TTGGACTGCTTCCCAAGCTCACTGCACTCCTAGGCA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAAGGCTGCCAGGAAATaGATGCTGCCCAACAACATC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKKAARK*MLPNNI
Trigger: GATGTTGTTGGGCAGCATTCATTTCCTGGCAGCCTT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACATCCATTCCAAGGCTaGCAGGAAATGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQHPFQG*QEMNAA
Trigger: GGCAGCATTCATTTCCTGGCAGCCTTGGAATGGATG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAGGGCGGAATCCATATaGTGTGGCAGGGCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSRAESI*CGRASK
Trigger: CTTGGACGCCCTGCCACAGCATATGGATTCCGCCCT...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATATTTCCGGGGACGGTaGCCAAAGTACCCTCACACC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTYFRGR*PKYPHT
Trigger: GGTGTGAGGGTACTTTGGCCACCGTCCCCGGAAATA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATTCGTTCTCCCAACATaGGGTCCCCCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQFVLPT*GPPFLQ
Trigger: TTGGAGAAATGGGGGACCCCATGTTGGGAGAACGAA...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGAGGATGGGGTATCTTaGGAGGCAGGCGCGGTTATT +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTEDGVS*EAGAVI
Trigger: AATAACCGCGCCTGCCTCTCAAGATACCCCATCCTC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGAGGATGGGGTATCTTaGGAGGCAGGCGCGGTTATT +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSEDGVS*EAGAVI
Trigger: AATAACCGCGCCTGCCTCTCAAGATACCCCATCCTC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTATGCCTAGGAGTGCAGTaGGCTTGGGAAGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLCLGVQ*AWEAVQ
Trigger: TTGGACTGCTTCCCAAGCTCACTGCACTCCTAGGCA...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACATGCATTAGGTCTATaGGATATGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQHALGL*DMLEPV
Trigger: CACAGGCTCCAGCATATCTCATAGACCTAATGCATG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACACCATCTCCAGCCACTaGGAGTTATGCCAGCGAAAC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDTISSH*ELCQRN
Trigger: GTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGT...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCACCATCTCCAGCCACTaGGAGTTATGCCAGCGAAAC +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTTISSH*ELCQRN
Trigger: GTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGT...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCCAGGGCGTCCAAGAATaGCAACTGGTTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSQGVQE*QLVGQS
Trigger: GCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTG...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATTATTTCCGGGGACGGTaGCCAAAGTACCCTCACACC +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHYFRGR*PKYPHT
Trigger: GGTGTGAGGGTACTTTGGCCACCGTCCCCGGAAATA...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTTCATCATTAGAGATCTaGGCTGCAAGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGASSLEI*AARSPT
Trigger: TGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGA...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGARMPTG*PKPSIP
Trigger: TGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTGIHML*QGVQEC
Trigger: GCATTCTTGGACGCCCTGCCACAGCATATGGATTCC...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAVKVGG*YSAGLH
Trigger: ATGAAGACCTGCTGAATATCACCCTCCGACTTTTAC...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTCAGAGCCCTCTTCATaGGCATCTTCAGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDSEPSS*ASSAHF
Trigger: GAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCATGCATTAGGTCTATaGGATATGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCHALGL*DMLEPV
Trigger: CACAGGCTCCAGCATATCTCATAGACCTAATGCATG...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATTCACTCTCATCCATCTaGCGACTCTCTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDSLSSI*RLSTIS
Trigger: GGAGATGGTAGAGAGTCGTCAGATGGATGAGAGTGA...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTCACTCTCATCCATCTaGCGACTCTCTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDSLSSI*RLSTIS
Trigger: GGAGATGGTAGAGAGTCGTCAGATGGATGAGAGTGA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGCTAACTCGACACTTTaGTTCCAGTCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCANSTL*FQSSLR
Trigger: CCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAATTAGAGATCTGGGCTaGAAGGTCCCCAACATAATC +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQIRDLG*KVPNII
Trigger: GATTATGTTGGGGACCTTGCAGCCCAGATCTCTAAT...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACATGGAATGGTCAAGTTTaGAAGAGTTCCCAAACATTC +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTWNGQV*KSSQTF
Trigger: GAATGTTTGGGAACTCTTGCAAACTTGACCATTCCA...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACCATCCATTCCAAGGCTaGCAGGAAATGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDHPFQG*QEMNAA
Trigger: GGCAGCATTCATTTCCTGGCAGCCTTGGAATGGATG...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCATCCATTCCAAGGCTaGCAGGAAATGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTHPFQG*QEMNAA
Trigger: GGCAGCATTCATTTCCTGGCAGCCTTGGAATGGATG...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTTCTCCGGTAAGTGTTaGCAAGGGCAATCGACATCC +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTFSGKC*QGQSTS
Trigger: GGATGTCGATTGCCCTTGGCAACACTTACCGGAGAA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538366.5
CDS-3UTR CCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATTTCGTTCTCCCAACATaGGGTCCCCCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDFVLPT*GPPFLQ
Trigger: TTGGAGAAATGGGGGACCCCATGTTGGGAGAACGAA...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHGIHML*QGVQEC
Trigger: GCATTCTTGGACGCCCTGCCACAGCATATGGATTCC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSGIHML*QGVQEC
Trigger: GCATTCTTGGACGCCCTGCCACAGCATATGGATTCC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAATAAGCTTTTACCTCTaGCTGGTCTTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQISFYL*LVFRLC
Trigger: ACAGAGCCTGAAGACCAGCCAGAGGTAAAAGCTTAT...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACATCAGAGCCCTCTTCATaGGCATCTTCAGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTSEPSS*ASSAHF
Trigger: GAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGA...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTCAGAGCCCTCTTCATaGGCATCTTCAGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSSEPSS*ASSAHF
Trigger: GAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACATTTAGCAATTCAATaGGTGCAGGGATTATGCCAG +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQHLAIQ*VQGLCQ
Trigger: CTGGCATAATCCCTGCACTCATTGAATTGCTAAATG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAAAGGCTGCCAGGAAATaGATGCTGCCCAACAACATC +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTKAARK*MLPNNI
Trigger: GATGTTGTTGGGCAGCATTCATTTCCTGGCAGCCTT...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATAAGGCTGCCAGGAAATaGATGCTGCCCAACAACATC +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHKAARK*MLPNNI
Trigger: GATGTTGTTGGGCAGCATTCATTTCCTGGCAGCCTT...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAAAGGCTGCCAGGAAATaGATGCTGCCCAACAACATC +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPKAARK*MLPNNI
Trigger: GATGTTGTTGGGCAGCATTCATTTCCTGGCAGCCTT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAATGTGGTTTGATGAGTaGACAATGTCAGTATCAACT +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTMWFDE*TMSVST
Trigger: AGTTGATACTGACATTGTTCACTCATCAAACCACAT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAAATCTAGAAATCCATaGGCATGCTCAGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKKSRNP*ACSGQN
Trigger: ATTCTGCCCTGAGCATGCTCATGGATTTCTAGATTT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAAACAAAACACAAGCTaGAAGCCCAAGAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAKQNTS*KPKRKV
Trigger: GACTTTCCTCTTGGGCTTTCAGCTTGTGTTTTGTTT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR GCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGGATTTCGAGCAAGCTaGAGGATCAAAGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTGFRAS*RIKAEP
Trigger: GGGTTCTGCTTTGATCCTGCAGCTTGCTCGAAATCC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCGCTAACTCGACACTTTaGTTCCAGTCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTANSTL*FQSSLR
Trigger: CCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGC...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACGCTAACTCGACACTTTaGTTCCAGTCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDANSTL*FQSSLR
Trigger: CCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGC...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTATTAGAGATCTGGGCTaGAAGGTCCCCAACATAATC +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCIRDLG*KVPNII
Trigger: GATTATGTTGGGGACCTTGCAGCCCAGATCTCTAAT...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACCTGCCAGGAAATGAATaGTGCCCAACAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDLPGNE*CPTTSP
Trigger: TGGAGATGTTGTTGGGCAGCATTCATTTCCTGGCAG...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACACATCCATTCCAAGGCTaGCAGGAAATGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTHPFQG*QEMNAA
Trigger: GGCAGCATTCATTTCCTGGCAGCCTTGGAATGGATG...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGGTCTTCAGGCTCTGTaGAAGCAGCAAATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTGLQAL*KQQMKA
Trigger: AGCCTTCATTTGCTGCTTGCACAGAGCCTGAAGACC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR GCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTCCTTTGAGGTCAGCTaGAAGGGGCTTTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTSFEVS*KGLSFV
Trigger: AACAAAGGAAAGCCCCTTGCAGCTGACCTCAAAGGA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTCATCATTAGAGATCTaGGCTGCAAGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTSSLEI*AARSPT
Trigger: TGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAGTCTATGAGATATGCTaGAGCCTGTGTTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKVYEIC*SLCFLD
Trigger: ATCAAGGAAACACAGGCTCCAGCATATCTCATAGAC...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAGTCTATGAGATATGCTaGAGCCTGTGTTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQVYEIC*SLCFLD
Trigger: ATCAAGGAAACACAGGCTCCAGCATATCTCATAGAC...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAGAAATCGGGACTTATaGCTCCTTCAGAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKRNRDL*LLQRQL
Trigger: TAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATTCCAAGAATGCCAACTaGTTGGCCAAAGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDSKNAN*LAKAIH
Trigger: ATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGA...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGAGTCAGACATTTTaGGGGAATAGATGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAGSQTF*GNRCFE
Trigger: TTCAAAGCATCTATTCCCCCAAAATGTCTGACTCCC...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCCACTCTCAAGCACAGTaGCAGTCTTCAAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSHSQAQ*QSSRWQ
Trigger: CTGCCATCTTGAAGACTGCCACTGTGCTTGAGAGTG...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR TCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAGCTTTCTTCTTCTTTaGGAGTTCTTCTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKSFLLL*EFFLPK
Trigger: CTTTGGCAAGAAGAACTCTCAAAGAAGAAGAAAGCT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAGCTTTCTTCTTCTTTaGGAGTTCTTCTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGASFLLL*EFFLPK
Trigger: CTTTGGCAAGAAGAACTCTCAAAGAAGAAGAAAGCT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDVKVGG*YSAGLH
Trigger: ATGAAGACCTGCTGAATATCACCCTCCGACTTTTAC...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATCATGCATTAGGTCTATaGGATATGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHHALGL*DMLEPV
Trigger: CACAGGCTCCAGCATATCTCATAGACCTAATGCATG...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGCTAACTCGACACTTTaGTTCCAGTCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHANSTL*FQSSLR
Trigger: CCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAATTCAGCAGGTCTTCATaGTCACAAGGTATCATTTTC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKFSRSS*SQGIIF
Trigger: GAAAATGATACCTTGTGAGCATGAAGACCTGCTGAA...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCATTAGAGATCTGGGCTaGAAGGTCCCCAACATAATC +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTIRDLG*KVPNII
Trigger: GATTATGTTGGGGACCTTGCAGCCCAGATCTCTAAT...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGGAATGGTCAAGTTTaGAAGAGTTCCCAAACATTC +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQWNGQV*KSSQTF
Trigger: GAATGTTTGGGAACTCTTGCAAACTTGACCATTCCA...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAATGGAATGGTCAAGTTTaGAAGAGTTCCCAAACATTC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKWNGQV*KSSQTF
Trigger: GAATGTTTGGGAACTCTTGCAAACTTGACCATTCCA...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCCTGCCAGGAAATGAATaGTGCCCAACAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSLPGNE*CPTTSP
Trigger: TGGAGATGTTGTTGGGCAGCATTCATTTCCTGGCAG...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATCTGCCAGGAAATGAATaGTGCCCAACAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHLPGNE*CPTTSP
Trigger: TGGAGATGTTGTTGGGCAGCATTCATTTCCTGGCAG...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACATTTACCACAAGCCCCTaGTACTTTTTAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTFTTSP*YFLKVF
Trigger: AAAAACCTTTAAAAAGTACCAGGGGCTTGTGGTAAA...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTATCATCATTAGAGATCTaGGCTGCAAGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLSSLEI*AARSPT
Trigger: TGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGA...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACATCATCATTAGAGATCTaGGCTGCAAGGTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTSSLEI*AARSPT
Trigger: TGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGA...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAGTCTAAGTCTGGAATaGTCAAGTTTGCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGASLSLE*SSLQEF
Trigger: GAACTCTTGCAAACTTGACCATTCCAGACTTAGACT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAGTCTAAGTCTGGAATaGTCAAGTTTGCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKSLSLE*SSLQEF
Trigger: GAACTCTTGCAAACTTGACCATTCCAGACTTAGACT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATCCTTCATGAATGTATaGCTCAATTCGATCATCACC +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQSFMNV*LNSIIT
Trigger: GGTGATGATCGAATTGAGCCATACATTCATGAAGGA...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPRMPTG*PKPSIP
Trigger: TGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSRMPTG*PKPSIP
Trigger: TGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCT...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATTCCAAGAATGCCAACTaGTTGGCCAAAGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHSKNAN*LAKAIH
Trigger: ATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGA...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCATCCAAGAATGCCAACTaGTTGGCCAAAGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPSKNAN*LAKAIH
Trigger: ATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGA...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTCAGTTTTGTGGCTCATaGGAAATGTTACTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAQFCGS*EMLLSI
Trigger: GATGCTAAGTAACATTTCCCATGAGCCACAAAACTG...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTCAGCATTCAGTTTTGTaGCTCATGGGAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAQHSVL*LMGNVT
Trigger: AGTAACATTTCCCATGAGCCACAAAACTGAATGCTG...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGCTTTCACCAACATGTaGACTATGTTCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTAFTNM*TMFLFL
Trigger: GAGGAACAAGAACATAGTTCACATGTTGGTGAAAGC...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTVKVGG*YSAGLH
Trigger: ATGAAGACCTGCTGAATATCACCCTCCGACTTTTAC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLVKVGG*YSAGLH
Trigger: ATGAAGACCTGCTGAATATCACCCTCCGACTTTTAC...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAGTCAATTCGTTCATCTaGACATTCAAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQVNSFI*TFKQHL
Trigger: AAGATGCTGTTTGAATGTTCAGATGAACGAATTGAC...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATCATTTAGCAATTCAATaGGTGCAGGGATTATGCCAG +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDHLAIQ*VQGLCQ
Trigger: CTGGCATAATCCCTGCACTCATTGAATTGCTAAATG...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAGAATATCTCCTTCATaGATGTATGGCTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGARISPS*MYGSIR
Trigger: TCGAATTGAGCCATACATTCATGAAGGAGATATTCT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAAAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATGCCATATCCAAACACTaGGTCAACCTACAAAGATCT +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDAISKH*VNLQRS
Trigger: AGATCTTTGTAGGTTGACTCAGTGTTTGGATATGGC...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR GCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAGAGTCAAGTGGACCTTaGTCCCAAGGAATTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLESSGP*SQGILS
Trigger: AGACAAAATTCCTTGGGAGCAAGGTCCACTTGACTC...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR CCA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACACAAGAGTCATCCATaGATACAGTTCCAATCATTA +
Preference number: 4 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQHKSHP*IQFQSL
Trigger: TAATGATTGGAACTGTATCCATGGATGACTCTTGTG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAAATCGGGACTTATaGCTCCTTCAGAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDRNRDL*LLQRQL
Trigger: TAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCT...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTTTTGTGGCTCATaGGAAATGTTACTTAGCATC +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCQFCGS*EMLLSI
Trigger: GATGCTAAGTAACATTTCCCATGAGCCACAAAACTG...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAGCTTTCACCAACATGTaGACTATGTTCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLAFTNM*TMFLFL
Trigger: GAGGAACAAGAACATAGTTCACATGTTGGTGAAAGC...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGCTTTCACCAACATGTaGACTATGTTCTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHAFTNM*TMFLFL
Trigger: GAGGAACAAGAACATAGTTCACATGTTGGTGAAAGC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGTCAATTCGTTCATCTaGACATTCAAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCVNSFI*TFKQHL
Trigger: AAGATGCTGTTTGAATGTTCAGATGAACGAATTGAC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTACATTTAGCAATTCAATaGGTGCAGGGATTATGCCAG +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLHLAIQ*VQGLCQ
Trigger: CTGGCATAATCCCTGCACTCATTGAATTGCTAAATG...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTAGAATATCTCCTTCATaGATGTATGGCTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCRISPS*MYGSIR
Trigger: TCGAATTGAGCCATACATTCATGAAGGAGATATTCT...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATTCAGCAGGTCTTCATaGTCACAAGGTATCATTTTC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTFSRSS*SQGIIF
Trigger: GAAAATGATACCTTGTGAGCATGAAGACCTGCTGAA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTTCAGCAGGTCTTCATaGTCACAAGGTATCATTTTC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDFSRSS*SQGIIF
Trigger: GAAAATGATACCTTGTGAGCATGAAGACCTGCTGAA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTGGAATGGTCAAGTTTaGAAGAGTTCCCAAACATTC +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDWNGQV*KSSQTF
Trigger: GAATGTTTGGGAACTCTTGCAAACTTGACCATTCCA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTCCTTTCTCAAGGTTTaGTTTTCAGGGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTSFLKV*FSGSSS
Trigger: TGATGAAGACCCTGAAAACCAAACCTTGAGAAAGGA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTCCTTTCTCAAGGTTTaGTTTTCAGGGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDSFLKV*FSGSSS
Trigger: TGATGAAGACCCTGAAAACCAAACCTTGAGAAAGGA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAAGTCTAAGTCTGGAATaGTCAAGTTTGCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTSLSLE*SSLQEF
Trigger: GAACTCTTGCAAACTTGACCATTCCAGACTTAGACT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAGTCTATGAGATATGCTaGAGCCTGTGTTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPVYEIC*SLCFLD
Trigger: ATCAAGGAAACACAGGCTCCAGCATATCTCATAGAC...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGTCTATGAGATATGCTaGAGCCTGTGTTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSVYEIC*SLCFLD
Trigger: ATCAAGGAAACACAGGCTCCAGCATATCTCATAGAC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATCCTTCATGAATGTATaGCTCAATTCGATCATCACC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTSFMNV*LNSIIT
Trigger: GGTGATGATCGAATTGAGCCATACATTCATGAAGGA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAAGAAATCGGGACTTATaGCTCCTTCAGAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTRNRDL*LLQRQL
Trigger: TAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCT...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACAGTTTTGTGGCTCATaGGAAATGTTACTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTQFCGS*EMLLSI
Trigger: GATGCTAAGTAACATTTCCCATGAGCCACAAAACTG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCAGCATTCAGTTTTGTaGCTCATGGGAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTQHSVL*LMGNVT
Trigger: AGTAACATTTCCCATGAGCCACAAAACTGAATGCTG...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
3UTR CAA 72 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAGTATCAACTGTACTTA +
Preference number: 4 (lower is better)
Translates to: AHGKCYLASRCG*MSEQCQYQLYL
Trigger: TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACCTTCATAGTGAACAATaGGTGCTTTTTCTGATGGAT +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDLHSEQ*VLFLMD
Trigger: ATCCATCAGAAAAAGCACTCATTGTTCACTATGAAG...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAGCTTTCTTCTTCTTTaGGAGTTCTTCTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSSFLLL*EFFLPK
Trigger: CTTTGGCAAGAAGAACTCTCAAAGAAGAAGAAAGCT...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAAGCTTTCTTCTTCTTTaGGAGTTCTTCTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTSFLLL*EFFLPK
Trigger: CTTTGGCAAGAAGAACTCTCAAAGAAGAAGAAAGCT...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCAGTGTATGCAAACATTaGTTTAAAGCGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTSVCKH*FKAVIH
Trigger: ATGGATGACCGCTTTAAATCAATGTTTGCATACACT...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAAGTGTATGCAAACATTaGTTTAAAGCGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTSVCKH*FKAVIH
Trigger: ATGGATGACCGCTTTAAATCAATGTTTGCATACACT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATAGTGTATGCAAACATTaGTTTAAAGCGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDSVCKH*FKAVIH
Trigger: ATGGATGACCGCTTTAAATCAATGTTTGCATACACT...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAATATCTCCTTCATaGATGTATGGCTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDRISPS*MYGSIR
Trigger: TCGAATTGAGCCATACATTCATGAAGGAGATATTCT...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAATGTGGTTTGATGAGTaGACAATGTCAGTATCAACT +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTMWFDE*TMSVST
Trigger: AGTTGATACTGACATTGTTCACTCATCAAACCACAT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR GCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTTCAGCAGGTCTTCATaGTCACAAGGTATCATTTTC +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSFSRSS*SQGIIF
Trigger: GAAAATGATACCTTGTGAGCATGAAGACCTGCTGAA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTATCCTTTCTCAAGGTTTaGTTTTCAGGGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLSFLKV*FSGSSS
Trigger: TGATGAAGACCCTGAAAACCAAACCTTGAGAAAGGA...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACACAAGAGTCATCCATaGATACAGTTCCAATCATTA +
Preference number: 4 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTHKSHP*IQFQSL
Trigger: TAATGATTGGAACTGTATCCATGGATGACTCTTGTG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTCCTTCATGAATGTATaGCTCAATTCGATCATCACC +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSSFMNV*LNSIIT
Trigger: GGTGATGATCGAATTGAGCCATACATTCATGAAGGA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTACAGCATTCAGTTTTGTaGCTCATGGGAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLQHSVL*LMGNVT
Trigger: AGTAACATTTCCCATGAGCCACAAAACTGAATGCTG...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTCACATAAGCTTGCTTaGAGTACAGAAACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTSHKLA*STETVS
Trigger: AGAAACTGTTTCTGTACTCCAAGCAAGCTTATGTGA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538366.5
CDS-3UTR TCA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACACTTCATAGTGAACAATaGGTGCTTTTTCTGATGGAT +
Preference number: 4 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTLHSEQ*VLFLMD
Trigger: ATCCATCAGAAAAAGCACTCATTGTTCACTATGAAG...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATCTTCATAGTGAACAATaGGTGCTTTTTCTGATGGAT +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHLHSEQ*VLFLMD
Trigger: ATCCATCAGAAAAAGCACTCATTGTTCACTATGAAG...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000538366.5
CDS-3UTR TCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGTCAATTCGTTCATCTaGACATTCAAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSVNSFI*TFKQHL
Trigger: AAGATGCTGTTTGAATGTTCAGATGAACGAATTGAC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAAGAATATCTCCTTCATaGATGTATGGCTCAATTCGA +
Preference number: 4 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLRISPS*MYGSIR
Trigger: TCGAATTGAGCCATACATTCATGAAGGAGATATTCT...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATAGATTTCTTCTAAGCTaGGATTACACATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHRFLLS*DYTWKQ
Trigger: CTGTTTCCATGTGTAATCTCAGCTTAGAAGAAATCT...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR TCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATATGTGGTTTGATGAGTaGACAATGTCAGTATCAACT +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHMWFDE*TMSVST
Trigger: AGTTGATACTGACATTGTTCACTCATCAAACCACAT...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTTTACCACAAGCCCCTaGTACTTTTTAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PTITSTCIIRQRSKINPTFTTSP*YFLKVF
Trigger: AAAAACCTTTAAAAAGTACCAGGGGCTTGTGGTAAA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCACACAAGAGTCATCCATaGATACAGTTCCAATCATTA +
Preference number: 4 (lower is better)
Translates to: RPTITSTCIIRQRSKINPHKSHP*IQFQSL
Trigger: TAATGATTGGAACTGTATCCATGGATGACTCTTGTG...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTTTACCACAAGCCCCTaGTACTTTTTAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSFTTSP*YFLKVF
Trigger: AAAAACCTTTAAAAAGTACCAGGGGCTTGTGGTAAA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CCA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATTTTACCACAAGCCCCTaGTACTTTTTAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHFTTSP*YFLKVF
Trigger: AAAAACCTTTAAAAAGTACCAGGGGCTTGTGGTAAA...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CCA 90 bp GCGTCCTCCCCTTGCATGGCGGCAGCGGCAGCGGCGTGGAGAGGATaGGGTATCTTGAGAGGCAGGCGCGGTTATTTCCGGGGACGGTGG +
Preference number: 5 (lower is better)
Translates to: ASSPCMAAAAAAWRG*GILRGRRGYFRGRW
Trigger: CCACCGTCCCCGGAAATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS GCA 90 bp GGCCAAAGTACCCTCACACCCAGAGGCGATGACAGTCCTGAGGCCTaGAAGGCGGGGCAGCAGCGGCGCTGTGGTTACCACGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: GQSTLTPRGDDSPEA*KAGQQRRCGYHGEA
Trigger: GGCTTCACCGTGGTAACCACAGCGCCGCTGCTGCCCCGCCTTGCAGGCCTCAGGACTGTCATCGCCTCTGGGTGTGAGGGTACTTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS CCA 90 bp AGGTATCTGGCGTCCTCCCCTTGCATGGCGGCAGCGGCAGCGGCGTaGAGAGGATGGGGTATCTTGAGAGGCAGGCGCGGTTATTTCCGG +
Preference number: 5 (lower is better)
Translates to: RYLASSPCMAAAAAA*RGWGILRGRRGYFR
Trigger: CCGGAAATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGATACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACATCTGGCGTCCTCCCCTaGCATGGCGGCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTSGVLP*HGGSGS
Trigger: GCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGA...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS CCA 90 bp CGGAATCCATATGCTGTGGCAGGGCGTCCAAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCAAGGCTGCCAGGAAATGAATGCTGC +
Preference number: 5 (lower is better)
Translates to: RNPYAVAGRPRMPTG*PKPSIPRLPGNECC
Trigger: GCAGCATTCATTTCCTGGCAGCCTTGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS GCA 90 bp AGATCCATAGCCATAGTAGTAAGGTTCATCAGGGCGGAATCCATATaGTGTGGCAGGGCGTCCAAGAATGCCAACTGGTTGGCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RSIAIVVRFIRAESI*CGRASKNANWLAKA
Trigger: GGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCGCCCTGATGAACCTTACTACTATGGCTATGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CCA 90 bp CATAGCCATAGTAGTAAGGTTCATCAGGGCGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGCCAACTGGTTGGCCAAAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: HSHSSKVHQGGIHML*QGVQECQLVGQSHP
Trigger: TGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCGCCCTGATGAACCTTACTACTATGGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATCTGGCGTCCTCCCCTaGCATGGCGGCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTSGVLP*HGGSGS
Trigger: GCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS GCA 90 bp AAATGGCCAGTGGGGCCCAAGGAGCCCATATCCACTGGCTATCAATaGCATTATCCTGCCACCTTTCCAATTAGTTTGAGCTCATGTAGC +
Preference number: 5 (lower is better)
Translates to: KWPVGPKEPISTGYQ*HYPATFPISLSSCS
Trigger: GCTACATGAGCTCAAACTAATTGGAAAGGTGGCAGGATAATGGCATTGATAGCCAGTGGATATGGGCTCCTTGGGCCCCACTGGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490550.1
CDS-3UTR CAA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAGGAGTGCAGTGAGCTaGGGAAGCAGTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGARSAVS*GSSPTC
Trigger: ACAAGTTGGACTGCTTCCCAAGCTCACTGCACTCCT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAGGAGCCTGTGTTTCCTaGATTATGACGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTGACVS*IMTSLV
Trigger: CACAAGAGACGTCATAATCAAGGAAACACAGGCTCC...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAAGAGGATGGGGTATCTaGAGAGGCAGGCGCGGTTAT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTRGWGI*RGRRGY
Trigger: ATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATCTTCTCTCAGGACCCTaGCTAATGCACCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDLLSGP*LMHQGQ
Trigger: CTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAG...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAATTAGCAGCTCAAAATaGTCCCGATCAAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTISSSK*SRSRAF
Trigger: GAAAGCCCTTGATCGGGACAATTTTGAGCTGCTAAT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTAAGAATGCCAACTGGTaGGCCAAAGCCATCCATTCC +
Preference number: 5 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAKNANW*AKAIHS
Trigger: GGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTT...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS TCA 90 bp TCCTCAGTCCTGTGTCAAAGGATAGGTTTAGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCATGCTCACAAGGTATCATTTTCACCA +
Preference number: 5 (lower is better)
Translates to: SSVLCQRIGLVKVGG*YSAGLHAHKVSFSP
Trigger: TGGTGAAAATGATACCTTGTGAGCATGAAGACCTGCTGAATATCACCCTCCGACTTTTACTAAACCTATCCTTTGACACAGGACTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAGAGGATGGGGTATCTaGAGAGGCAGGCGCGGTTAT +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSRGWGI*RGRRGY
Trigger: ATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCT...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAACCTTTAACTTTCCTTTaGAGGTATCTGGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQPLTFL*RYLASS
Trigger: GGAGGACGCCAGATACCTCAAAAGGAAAGTTAAAGG...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR CAA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAACTTCAACCACCTTCCTaGCCAGGGAAGTTATATCTG +
Preference number: 5 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKLQPPS*PGKLYL
Trigger: CAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAG...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTCTTCAACCACCTTCCTaGCCAGGGAAGTTATATCTG +
Preference number: 5 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGALQPPS*PGKLYL
Trigger: CAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAG...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATCTTCTCTCAGGACCCTaGCTAATGCACCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHLLSGP*LMHQGQ
Trigger: CTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAG...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCACTTCTCTCAGGACCCTaGCTAATGCACCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPLLSGP*LMHQGQ
Trigger: CTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAG...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTACTTCTCTCAGGACCCTaGCTAATGCACCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLLLSGP*LMHQGQ
Trigger: CTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAG...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGGAGTGCAGTGAGCTaGGGAAGCAGTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDRSAVS*GSSPTC
Trigger: ACAAGTTGGACTGCTTCCCAAGCTCACTGCACTCCT...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGATTATGCCAGATTaGGCTAGCAATGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAGIMPD*ASNAAQ
Trigger: TTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCC...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGACGTCTCTTGTGGCTaGGTGGAAAACCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCDVSCG*VENHLV
Trigger: TACCAGATGGTTTTCCACCAAGCCACAAGAGACGTC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAG +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTASRCG*MSEQCQ
Trigger: CTGACATTGTTCACTCATCAAACCACATCTTGATGC...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATTAAGTCGAATGCTTTaGAGGTATCTGGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQLSRML*RYLASS
Trigger: GGAGGACGCCAGATACCTCAAAAGCATTCGACTTAA...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS TCA 90 bp ATTAGCAGCTCAAAATTGTCCCGATCAAGGGCTTTCACCAACATGTaGACTATGTTCTTGTTCCTCATTTTCAGTTCGGTACGAGTATCC +
Preference number: 5 (lower is better)
Translates to: ISSSKLSRSRAFTNM*TMFLFLIFSSVRVS
Trigger: GGATACTCGTACCGAACTGAAAATGAGGAACAAGAACATAGTTCACATGTTGGTGAAAGCCCTTGATCGGGACAATTTTGAGCTGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000474292.1
ENST00000538366.5
CDS CCA 90 bp TGGTCCATCATGCTGAGAAATGTTTCTAATCATTTTCATCAGCAATaGATCCTTAAACTTCAGAGCCCTCTTCATGAGCATCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: WSIMLRNVSNHFHQQ*ILKLQSPLHEHLQP
Trigger: GGGCTGAAGATGCTCATGAAGAGGGCTCTGAAGTTTAAGGATCCATTGCTGATGAAAATGATTAGAAACATTTCTCAGCATGATGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATG +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTISVLA*RLLSRM
Trigger: CATTCGACTTAAGAGTCTCAATGCCAACACAGATAT...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGGGAAGCAGTCCAACTaGTACCATCTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCGKQSN*YHLIPQ
Trigger: CTGAGGAATAAGATGGTACAAGTTGGACTGCTTCCC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAAGGAGTGCAGTGAGCTaGGGAAGCAGTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLRSAVS*GSSPTC
Trigger: ACAAGTTGGACTGCTTCCCAAGCTCACTGCACTCCT...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAAGGAGTGCAGTGAGCTaGGGAAGCAGTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPRSAVS*GSSPTC
Trigger: ACAAGTTGGACTGCTTCCCAAGCTCACTGCACTCCT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGGGATTATGCCAGATTaGGCTAGCAATGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCGIMPD*ASNAAQ
Trigger: TTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATGACGTCTCTTGTGGCTaGGTGGAAAACCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDDVSCG*VENHLV
Trigger: TACCAGATGGTTTTCCACCAAGCCACAAGAGACGTC...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTGGAGCCTGTGTTTCCTaGATTATGACGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCGACVS*IMTSLV
Trigger: CACAAGAGACGTCATAATCAAGGAAACACAGGCTCC...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATAAGAATGCCAACTGGTaGGCCAAAGCCATCCATTCC +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDKNANW*AKAIHS
Trigger: GGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTT...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCAAGAATGCCAACTGGTaGGCCAAAGCCATCCATTCC +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTKNANW*AKAIHS
Trigger: GGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTT...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAAAGAATGCCAACTGGTaGGCCAAAGCCATCCATTCC +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTKNANW*AKAIHS
Trigger: GGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTT...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS GCA 90 bp TCATTCAATAGTAGTTCTTCCAAGTTATCAGGATTTCGAGCAAGCTaGAGGATCAAAGCAGAACCCCGAACTTTGTCAGGAATATCTTCA +
Preference number: 5 (lower is better)
Translates to: SFNSSSSKLSGFRAS*RIKAEPRTLSGISS
Trigger: TGAAGATATTCCTGACAAAGTTCGGGGTTCTGCTTTGATCCTGCAGCTTGCTCGAAATCCTGATAACTTGGAAGAACTACTATTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000490550.1
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACCTTCAACCACCTTCCTaGCCAGGGAAGTTATATCTG +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDLQPPS*PGKLYL
Trigger: CAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAG...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGGGAAGCAGTCCAACTaGTACCATCTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTGKQSN*YHLIPQ
Trigger: CTGAGGAATAAGATGGTACAAGTTGGACTGCTTCCC...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAACATATAAACTGGAATGGTCAAGTTaGCAAGAGTTCCCAAACATT +
Preference number: 5 (lower is better)
Translates to: YLTEDRGAGVNLQLTTYKLEWSS*QEFPNI
Trigger: AATGTTTGGGAACTCTTGCAAACTTGACCATTCCAG...TTTATATGTTGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TATCAACTGTACTTAACAGAAGACAGAGGGGCTGGGGTTAATCTGCAGCTAACAGGTTTTAGTTTATCCTaGAGGTATGGAACCAACTTA +
Preference number: 5 (lower is better)
Translates to: YQLYLTEDRGAGVNLQLTGFSLS*RYGTNL
Trigger: TAAGTTGGTTCCATACCTCAAGGATAAACTAAAACC...TGTTAGCTGCAGATTAACCCCAGCCCCTCTGTCTTCTGTTAAGTACAGTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATGGGATTATGCCAGATTaGGCTAGCAATGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDGIMPD*ASNAAQ
Trigger: TTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCC...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCGGGATTATGCCAGATTaGGCTAGCAATGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTGIMPD*ASNAAQ
Trigger: TTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCC...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGACGTCTCTTGTGGCTaGGTGGAAAACCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTDVSCG*VENHLV
Trigger: TACCAGATGGTTTTCCACCAAGCCACAAGAGACGTC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAGACGTCTCTTGTGGCTaGGTGGAAAACCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPDVSCG*VENHLV
Trigger: TACCAGATGGTTTTCCACCAAGCCACAAGAGACGTC...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GTGGCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAAATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATG +
Preference number: 5 (lower is better)
Translates to: VAHGKCYLASRCGLMSEQISVLA*RLLSRM
Trigger: CATTCGACTTAAGAGTCTCAATGCCAACACAGATAT...TTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCCTTCAACCACCTTCCTaGCCAGGGAAGTTATATCTG +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSLQPPS*PGKLYL
Trigger: CAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAG...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACATTAGCAGCTCAAAATaGTCCCGATCAAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDISSSK*SRSRAF
Trigger: GAAAGCCCTTGATCGGGACAATTTTGAGCTGCTAAT...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATATTAGCAGCTCAAAATaGTCCCGATCAAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDISSSK*SRSRAF
Trigger: GAAAGCCCTTGATCGGGACAATTTTGAGCTGCTAAT...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGGGAAGCAGTCCAACTaGTACCATCTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSGKQSN*YHLIPQ
Trigger: CTGAGGAATAAGATGGTACAAGTTGGACTGCTTCCC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAGGGAAGCAGTCCAACTaGTACCATCTTATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPGKQSN*YHLIPQ
Trigger: CTGAGGAATAAGATGGTACAAGTTGGACTGCTTCCC...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCTCATGGGAAATGTTACTTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCTGGAATGGTCAAGTTaGCAAGAGTTCCCAAACATT +
Preference number: 5 (lower is better)
Translates to: AHGKCYLASRCGLMSEQCLEWSS*QEFPNI
Trigger: AATGTTTGGGAACTCTTGCAAACTTGACCATTCCAG...ACATTGTTCACTCATCAAACCACATCTTGATGCTAAGTAACATTTCCCATGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAGGAGCCTGTGTTTCCTaGATTATGACGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLGACVS*IMTSLV
Trigger: CACAAGAGACGTCATAATCAAGGAAACACAGGCTCC...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGGAGCCTGTGTTTCCTaGATTATGACGTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSGACVS*IMTSLV
Trigger: CACAAGAGACGTCATAATCAAGGAAACACAGGCTCC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS TCA 90 bp CCACTGGCTATCAATGCCATTATCCTGCCACCTTTCCAATTAGTTTaGGCTCATGTAGCACATCTTAATACAAAGGAGATTTCAGTTAAA +
Preference number: 5 (lower is better)
Translates to: PLAINAIILPPFQLV*AHVAHLNTKEISVK
Trigger: TTTAACTGAAATCTCCTTTGTATTAAGATGTGCTACATGAGCTCAAACTAATTGGAAAGGTGGCAGGATAATGGCATTGATAGCCAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490550.1
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCGCAGAACCCCGAACTTaGTCAGGAATATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTAEPRT*SGISSY
Trigger: ATATGAAGATATTCCTGACAAAGTTCGGGGTTCTGC...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACGCAGAACCCCGAACTTaGTCAGGAATATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDAEPRT*SGISSY
Trigger: ATATGAAGATATTCCTGACAAAGTTCGGGGTTCTGC...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAATTAGCAGCTCAAAATaGTCCCGATCAAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLISSSK*SRSRAF
Trigger: GAAAGCCCTTGATCGGGACAATTTTGAGCTGCTAAT...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACACTGGAATGGTCAAGTTaGCAAGAGTTCCCAAACATT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTLEWSS*QEFPNI
Trigger: AATGTTTGGGAACTCTTGCAAACTTGACCATTCCAG...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACAGAGGGGCTGGTTTTAGTTTATCCTaGAGGTATGGAACCAACTTA +
Preference number: 5 (lower is better)
Translates to: LMSEQCQYQLYLTEDRGAGFSLS*RYGTNL
Trigger: TAAGTTGGTTCCATACCTCAAGGATAAACTAAAACC...AGCCCCTCTGTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAG +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDASRCG*MSEQCQ
Trigger: CTGACATTGTTCACTCATCAAACCACATCTTGATGC...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGCAGAACCCCGAACTTaGTCAGGAATATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHAEPRT*SGISSY
Trigger: ATATGAAGATATTCCTGACAAAGTTCGGGGTTCTGC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAGCAGAACCCCGAACTTaGTCAGGAATATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLAEPRT*SGISSY
Trigger: ATATGAAGATATTCCTGACAAAGTTCGGGGTTCTGC...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATCTGGAATGGTCAAGTTaGCAAGAGTTCCCAAACATT +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHLEWSS*QEFPNI
Trigger: AATGTTTGGGAACTCTTGCAAACTTGACCATTCCAG...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAG +
Preference number: 5 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTASRCG*MSEQCQ
Trigger: CTGACATTGTTCACTCATCAAACCACATCTTGATGC...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAGCATCAAGATGTGGTTaGATGAGTGAACAATGTCAG +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPASRCG*MSEQCQ
Trigger: CTGACATTGTTCACTCATCAAACCACATCTTGATGC...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGACTTTCAGCATTCAGTTTaGTGGCTCATGGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: RCGLMSEQCQYQLYLTEDFQHSV*WLMGNV
Trigger: AACATTTCCCATGAGCCACAAAACTGAATGCTGAAA...GTCTTCTGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATTTCAGCATTCAGTTTaGTGGCTCATGGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTFQHSV*WLMGNV
Trigger: AACATTTCCCATGAGCCACAAAACTGAATGCTGAAA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTTTCAGCATTCAGTTTaGTGGCTCATGGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTFQHSV*WLMGNV
Trigger: AACATTTCCCATGAGCCACAAAACTGAATGCTGAAA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATGCTCCCAAGGAATTTaGTCTGATTGTTTTGCAACT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTCSQGI*SDCFAT
Trigger: AGTTGCAAAACAATCAGACAAAATTCCTTGGGAGCA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTCTCTTCACATAAGCTaGCTTGGAGTACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSSLHIS*LGVQKQ
Trigger: CTGTTTCTGTACTCCAAGCAAGCTTATGTGAAGAGA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538366.5
CDS TCA 90 bp AAGAATGGTAGCTTCCACTTCATAGTGAACAATGAGTGCTTTTTCTaGTGGATGTACATCTATATTCCCTCCTTTAACTTTCCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: KNGSFHFIVNNECFF*WMYIYIPSFNFPFE
Trigger: CTCAAAAGGAAAGTTAAAGGAGGGAATATAGATGTACATCCATCAGAAAAAGCACTCATTGTTCACTATGAAGTGGAAGCTACCATTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS-3UTR CAA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATG +
Preference number: 5 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTISVLA*RLLSRM
Trigger: CATTCGACTTAAGAGTCTCAATGCCAACACAGATAT...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp TTAGCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATG +
Preference number: 5 (lower is better)
Translates to: LASRCGLMSEQCQYQLYLISVLA*RLLSRM
Trigger: CATTCGACTTAAGAGTCTCAATGCCAACACAGATAT...TAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACAGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTEVISV*ALRLLS
Trigger: ACTTAAGAGTCTCAATGCCAACACAGATATAACTTC...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTEVISV*ALRLLS
Trigger: ACTTAAGAGTCTCAATGCCAACACAGATATAACTTC...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATAACACACATTGCTATTaGTTTGTAGTTGTCATTGCC +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDNTHCY*FVVVIA
Trigger: GGCAATGACAACTACAAACAAATAGCAATGTGTGTT...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCAACACACATTGCTATTaGTTTGTAGTTGTCATTGCC +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTNTHCY*FVVVIA
Trigger: GGCAATGACAACTACAAACAAATAGCAATGTGTGTT...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAGATGGTTTTAGTTTATCCTaGAGGTATGGAACCAACTTA +
Preference number: 5 (lower is better)
Translates to: TSTCIIRQRSKINPTHTDGFSLS*RYGTNL
Trigger: TAAGTTGGTTCCATACCTCAAGGATAAACTAAAACC...ATCTGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCATTTCAGCATTCAGTTTaGTGGCTCATGGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPFQHSV*WLMGNV
Trigger: AACATTTCCCATGAGCCACAAAACTGAATGCTGAAA...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp GCATCAAGATGTGGTTTGATGAGTGAACAATGTCAGTATCAACTGTACTTAACATACATAATGCAGTGTTaGTTTTCCAGTCTAGTAGCT +
Preference number: 5 (lower is better)
Translates to: ASRCGLMSEQCQYQLYLTYIMQC*FSSLVA
Trigger: AGCTACTAGACTGGAAAACAAACACTGCATTATGTA...TGTTAAGTACAGTTGATACTGACATTGTTCACTCATCAAACCACATCTTGATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCTACATAATGCAGTGTTaGTTTTCCAGTCTAGTAGCT +
Preference number: 5 (lower is better)
Translates to: PTITSTCIIRQRSKINPTYIMQC*FSSLVA
Trigger: AGCTACTAGACTGGAAAACAAACACTGCATTATGTA...GGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS GCA 90 bp TCTAATGTATTATCACAGACCTTTCGGATTTCATTATTCTTATCATaGATTAGGTCTATGAGATATGCTGGAGCCTGTGTTTCCTTGATT +
Preference number: 5 (lower is better)
Translates to: SNVLSQTFRISLFLS*IRSMRYAGACVSLI
Trigger: AATCAAGGAAACACAGGCTCCAGCATATCTCATAGACCTAATGCATGATAAGAATAATGAAATCCGAAAGGTCTGTGATAATACATTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHEVISV*ALRLLS
Trigger: ACTTAAGAGTCTCAATGCCAACACAGATATAACTTC...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSEVISV*ALRLLS
Trigger: ACTTAAGAGTCTCAATGCCAACACAGATATAACTTC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp ATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAACCCACACAAACACACATTGCTATTaGTTTGTAGTTGTCATTGCC +
Preference number: 5 (lower is better)
Translates to: ITSTCIIRQRSKINPTHTNTHCY*FVVVIA
Trigger: GGCAATGACAACTACAAACAAATAGCAATGTGTGTT...TGTGTGGGTTGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAAACACACATTGCTATTaGTTTGTAGTTGTCATTGCC +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPNTHCY*FVVVIA
Trigger: GGCAATGACAACTACAAACAAATAGCAATGTGTGTT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCGGTTTTAGTTTATCCTaGAGGTATGGAACCAACTTA +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSGFSLS*RYGTNL
Trigger: TAAGTTGGTTCCATACCTCAAGGATAAACTAAAACC...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATTACATAATGCAGTGTTaGTTTTCCAGTCTAGTAGCT +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHYIMQC*FSSLVA
Trigger: AGCTACTAGACTGGAAAACAAACACTGCATTATGTA...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AAAAACAAACACAGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCTACATAATGCAGTGTTaGTTTTCCAGTCTAGTAGCT +
Preference number: 5 (lower is better)
Translates to: KNKHRPTITSTCIIRQRSYIMQC*FSSLVA
Trigger: AGCTACTAGACTGGAAAACAAACACTGCATTATGTA...GGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCTGTGTTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS-3UTR CAA 90 bp AGACCCACAATAACATCAACATGCATTATTAGGCAAAGATCCAAAATTAACCCAATGAAACTGTCCATTTaGAGGCACAGAAAGAAAACA +
Preference number: 5 (lower is better)
Translates to: RPTITSTCIIRQRSKINPMKLSI*RHRKKT
Trigger: TGTTTTCTTTCTGTGCCTCAAAATGGACAGTTTCAT...TGGGTTAATTTTGGATCTTTGCCTAATAATGCATGTTGATGTTATTGTGGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS-3UTR CAA 90 bp CACTTAACATACATAATGCAGTGTTTGTTTTCCAGTCTAGTAGCTTTTCAGCATTTTTGTCTGATTGTTTaGCAACTGACTGAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: HLTYIMQCLFSSLVAFQHFCLIV*QLTEVS
Trigger: GGAAACTTCAGTCAGTTGCAAAACAATCAGACAAAA...ATGCTGAAAAGCTACTAGACTGGAAAACAAACACTGCATTATGTATGTTAAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS CCA 72 bp GCGTCCTCCCCTTGCATGGCGGCAGCGGCAGCGGCGTaGAGAGGATGGGGTATCTTGAGAGGCAGGCGCGGT +
Preference number: 6 (lower is better)
Translates to: ASSPCMAAAAAA*RGWGILRGRRG
Trigger: ACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp GCGGCAGCGGCAGCGGCGTGGAGAGGATGGGGTATCTaGAGAGGCAGGCGCGGTTATTTCCGGGGACGGTGG +
Preference number: 6 (lower is better)
Translates to: AAAAAAWRGWGI*RGRRGYFRGRW
Trigger: CCACCGTCCCCGGAAATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS CCA 72 bp CCTTGCATGGCGGCAGCGGCAGCGGCGTGGAGAGGATaGGGTATCTTGAGAGGCAGGCGCGGTTATTTCCGG +
Preference number: 6 (lower is better)
Translates to: PCMAAAAAAWRG*GILRGRRGYFR
Trigger: CCGGAAATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS CAA 90 bp CCTTGCATGGCGGCAGCGGCAGCGGCGTGGAGAGGATGGGGTATCTaGAGAGGCAGGCGCGGTTATTTCCGGGGACGGTGGCCAAAGTAC +
Preference number: 6 (lower is better)
Translates to: PCMAAAAAAWRGWGI*RGRRGYFRGRWPKY
Trigger: GTACTTTGGCCACCGTCCCCGGAAATAACCGCGCCTGCCTCTCAAGATACCCCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361580.7
ENST00000367767.5
ENST00000538366.5
CDS GCA 72 bp AGTCGAATGCTTTTGAGGTATCTGGCGTCCTCCCCTTaGATGGCGGCAGCGGCAGCGGCGTGGAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: SRMLLRYLASSP*MAAAAAAWRGW
Trigger: CCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGATACCTCAAAAGCATTCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS CAA 72 bp AAGTCGAATGCTTTTGAGGTATCTGGCGTCCTCCCCTaGCATGGCGGCAGCGGCAGCGGCGTGGAGAGGATG +
Preference number: 6 (lower is better)
Translates to: KSNAFEVSGVLP*HGGSGSGVERM
Trigger: CATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGATACCTCAAAAGCATTCGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS GCA 72 bp TTAACTTTCCTTTTGAGGTATCTGGCGTCCTCCCCTTaGATGGCGGCAGCGGCAGCGGCGTGGAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: LTFLLRYLASSP*MAAAAAAWRGW
Trigger: CCATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGATACCTCAAAAGGAAAGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS CAA 72 bp TTTAACTTTCCTTTTGAGGTATCTGGCGTCCTCCCCTaGCATGGCGGCAGCGGCAGCGGCGTGGAGAGGATG +
Preference number: 6 (lower is better)
Translates to: FNFPFEVSGVLP*HGGSGSGVERM
Trigger: CATCCTCTCCACGCCGCTGCCGCTGCCGCCATGCAAGGGGAGGACGCCAGATACCTCAAAAGGAAAGTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361580.7
ENST00000538366.5
CDS CCA 72 bp TATGCTGTGGCAGGGCGTCCAAGAATGCCAACTGGTTaGCCAAAGCCATCCATTCCAAGGCTGCCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: YAVAGRPRMPTG*PKPSIPRLPGN
Trigger: ATTTCCTGGCAGCCTTGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp ATATGCTGTGGCAGGGCGTCCAAGAATGCCAACTGGTaGGCCAAAGCCATCCATTCCAAGGCTGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: ICCGRASKNANW*AKAIHSKAARK
Trigger: TTTCCTGGCAGCCTTGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS GCA 72 bp GCCATAGTAGTAAGGTTCATCAGGGCGGAATCCATATaGTGTGGCAGGGCGTCCAAGAATGCCAACTGGTTG +
Preference number: 6 (lower is better)
Translates to: AIVVRFIRAESI*CGRASKNANWL
Trigger: CAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCGCCCTGATGAACCTTACTACTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CCA 72 bp AGTAGTAAGGTTCATCAGGGCGGAATCCATATGCTGTaGCAGGGCGTCCAAGAATGCCAACTGGTTGGCCAA +
Preference number: 6 (lower is better)
Translates to: SSKVHQGGIHML*QGVQECQLVGQ
Trigger: TTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCGCCCTGATGAACCTTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CCA 72 bp TATATTCCCTCCTTTAACTTTCCTTGTGATTGCCTTTaGGATGCCATCAAATGGCCAGTGGGGCCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: YIPSFNFPCDCL*DAIKWPVGPKE
Trigger: CTCCTTGGGCCCCACTGGCCATTTGATGGCATCCCAAAGGCAATCACAAGGAAAGTTAAAGGAGGGAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490550.1
CDS CAA 90 bp TCTTCAACCACCTTCCTTGCCAGGGAAGTTATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATGCTTTTGAGGTATCTGGCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSTTFLAREVISVLA*RLLSRMLLRYLASS
Trigger: GGAGGACGCCAGATACCTCAAAAGCATTCGACTTAAGAGTCTCAATGCCAACACAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS GCA 72 bp AGTAGTTCTTCCAAGTTATCAGGATTTCGAGCAAGCTaGAGGATCAAAGCAGAACCCCGAACTTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: SSSSKLSGFRAS*RIKAEPRTLSG
Trigger: TCCTGACAAAGTTCGGGGTTCTGCTTTGATCCTGCAGCTTGCTCGAAATCCTGATAACTTGGAAGAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000490550.1
ENST00000538366.5
CDS CAA 72 bp ACTCGACACTTTGCTTCCAGTCTTCTCTCAGGACCCTaGCTAATGCACCAAGGGCAGTTTCATTCAATAGTA +
Preference number: 6 (lower is better)
Translates to: TRHFASSLLSGP*LMHQGQFHSIV
Trigger: TACTATTGAATGAAACTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAGACTGGAAGCAAAGTGTCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp GTGGACCTTGCTCCCAAGGAATTTTGTCTGATTGTTTaGCAACTGACTGAAGTTTCCTTTGAGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VDLAPKEFCLIV*QLTEVSFEVSC
Trigger: GCAGCTGACCTCAAAGGAAACTTCAGTCAGTTGCAAAACAATCAGACAAAATTCCTTGGGAGCAAGGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS CAA 72 bp TCAACCACCTTCCTTGCCAGGGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGTCGAATGCTTTTGAGG +
Preference number: 6 (lower is better)
Translates to: STTFLAREVISV*ALRLLSRMLLR
Trigger: CCTCAAAAGCATTCGACTTAAGAGTCTCAATGCCAACACAGATATAACTTCCCTGGCAAGGAAGGTGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS CAA 90 bp TTACATTCTTCAACCACCTTCCTTGCCAGGGAAGTTATATCTGTGTaGGCATTGAGACTCTTAAGTCGAATGCTTTTGAGGTATCTGGCG +
Preference number: 6 (lower is better)
Translates to: LHSSTTFLAREVISV*ALRLLSRMLLRYLA
Trigger: CGCCAGATACCTCAAAAGCATTCGACTTAAGAGTCTCAATGCCAACACAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAGAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS TCA 72 bp CTGTGTCAAAGGATAGGTTTAGTAAAAGTCGGAGGGTaGTATTCAGCAGGTCTTCATGCTCACAAGGTATCA +
Preference number: 6 (lower is better)
Translates to: LCQRIGLVKVGG*YSAGLHAHKVS
Trigger: TGATACCTTGTGAGCATGAAGACCTGCTGAATATCACCCTCCGACTTTTACTAAACCTATCCTTTGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp TTTAGCAATTCAATGAGTGCAGGGATTATGCCAGATTaGGCTAGCAATGCAGCACAAGAGTCATCCATGGAT +
Preference number: 6 (lower is better)
Translates to: FSNSMSAGIMPD*ASNAAQESSMD
Trigger: ATCCATGGATGACTCTTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCCTGCACTCATTGAATTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp ACCTTCCTTGCCAGGGAAGTTATATCTGTGTTGGCATaGAGACTCTTAAGTCGAATGCTTTTGAGGTATCTG +
Preference number: 6 (lower is better)
Translates to: TFLAREVISVLA*RLLSRMLLRYL
Trigger: CAGATACCTCAAAAGCATTCGACTTAAGAGTCTCAATGCCAACACAGATATAACTTCCCTGGCAAGGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367767.5
CDS TCA 72 bp ATAAATAGTAATAGCTGGGTCAAACAAAACACAAGCTaGAAGCCCAAGAGGAAAGTCCAGGGAGTCAGACAT +
Preference number: 6 (lower is better)
Translates to: INSNSWVKQNTS*KPKRKVQGVRH
Trigger: ATGTCTGACTCCCTGGACTTTCCTCTTGGGCTTTCAGCTTGTGTTTTGTTTGACCCAGCTATTACTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS CAA 72 bp AGCGGTCATCCATGCTTATGTGGTAAAGAACACACATaGCTATTTGTTTGTAGTTGTCATTGCCTAGGAGTG +
Preference number: 6 (lower is better)
Translates to: SGHPCLCGKEHT*LFVCSCHCLGV
Trigger: CACTCCTAGGCAATGACAACTACAAACAAATAGCAATGTGTGTTCTTTACCACATAAGCATGGATGACCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS TCA 72 bp TCAAAATTGTCCCGATCAAGGGCTTTCACCAACATGTaGACTATGTTCTTGTTCCTCATTTTCAGTTCGGTA +
Preference number: 6 (lower is better)
Translates to: SKLSRSRAFTNM*TMFLFLIFSSV
Trigger: TACCGAACTGAAAATGAGGAACAAGAACATAGTTCACATGTTGGTGAAAGCCCTTGATCGGGACAATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000474292.1
ENST00000538366.5
CDS CAA 90 bp AGCATCTTCAGCCCATTTCCTTCACAGATAAGCTGTACATTTCTTTaGTTAGCAGCAAGATTAATGCAGAAAGAAATGAGTTCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: SIFSPFPSQISCTFL*LAARLMQKEMSSKS
Trigger: TGACTTGGAACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCTGAAGATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS TCA 72 bp ATCAATGCCATTATCCTGCCACCTTTCCAATTAGTTTaGGCTCATGTAGCACATCTTAATACAAAGGAGATT +
Preference number: 6 (lower is better)
Translates to: INAIILPPFQLV*AHVAHLNTKEI
Trigger: AATCTCCTTTGTATTAAGATGTGCTACATGAGCTCAAACTAATTGGAAAGGTGGCAGGATAATGGCATTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490550.1
CDS GCA 72 bp TTATCACAGACCTTTCGGATTTCATTATTCTTATCATaGATTAGGTCTATGAGATATGCTGGAGCCTGTGTT +
Preference number: 6 (lower is better)
Translates to: LSQTFRISLFLS*IRSMRYAGACV
Trigger: AACACAGGCTCCAGCATATCTCATAGACCTAATGCATGATAAGAATAATGAAATCCGAAAGGTCTGTGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS CAA 72 bp AGATCATCTTCTGCAGCACCTGGTTTTAGTTTATCCTaGAGGTATGGAACCAACTTATATTCTTTAAGAACC +
Preference number: 6 (lower is better)
Translates to: RSSSAAPGFSLS*RYGTNLYSLRT
Trigger: GGTTCTTAAAGAATATAAGTTGGTTCCATACCTCAAGGATAAACTAAAACCAGGTGCTGCAGAAGATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5
CDS TCA 72 bp AGCTTCCACTTCATAGTGAACAATGAGTGCTTTTTCTaGTGGATGTACATCTATATTCCCTCCTTTAACTTT +
Preference number: 6 (lower is better)
Translates to: SFHFIVNNECFF*WMYIYIPSFNF
Trigger: AAAGTTAAAGGAGGGAATATAGATGTACATCCATCAGAAAAAGCACTCATTGTTCACTATGAAGTGGAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000490550.1
ENST00000538366.5
CDS TCA 72 bp AAAGCTATTGCATATAAAGAGAAATCTAGAAATCCATaGGCATGCTCAGGGCAGAATACATACCCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: KAIAYKEKSRNP*ACSGQNTYPEK
Trigger: TTTTTCTGGGTATGTATTCTGCCCTGAGCATGCTCATGGATTTCTAGATTTCTCTTTATATGCAATAGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367765.5
CDS CAA 72 bp AGCCCATTTCCTTCACAGATAAGCTGTACATTTCTTTaGTTAGCAGCAAGATTAATGCAGAAAGAAATGAGT +
Preference number: 6 (lower is better)
Translates to: SPFPSQISCTFL*LAARLMQKEMS
Trigger: ACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361580.7
ENST00000367765.5
ENST00000367767.5
ENST00000538366.5