RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000164627

Ensembl transcript IDs: ENST00000229913.9, ENST00000287152.12, ENST00000394362.5, ENST00000441975.2, ENST00000458470.5, ENST00000465719.1, ENST00000482238.5, ENST00000538893.5

Found 1064 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCTGGGAGATCAGGATTGGCCTTCAGGATGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCC +
Preference number: 1 (lower is better)
Translates to: GLGDQDWPSGCPAFH*LACGWDILPGPVMA
Trigger: GGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 90 bp CAAGCTCTCAGCAGAGCCCCTGGGAGCTGCCCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCCTGCAGGGCAGATGGCTCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: QALSRAPGSCPLFSG*YDVLRPCRADGSLE
Trigger: CTCCAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATCATAGCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAAACCAGAGCACGGGCCAAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: STALPVAGTSCLDLS*PFLGFQTRARAKGE
Trigger: CTCTCCCTTGGCCCGTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCACGGGCCAAGGGAGAGAGCTGGCAAA +
Preference number: 1 (lower is better)
Translates to: CLWLGHPAWTCHGHF*ASKPEHGPRERAGK
Trigger: TTTGCCAGCTCTCTCCCTTGGCCCGTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTaGGTGAAGGTTGTGAGGCCCAAGGTACCCACACTGCCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: SLWKWGVSAQILPSG*VKVVRPKVPTLPSL
Trigger: GAGAGAGGGCAGTGTGGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp CACCTGCTCTGCCTCGGAGCCCTGGCAGTCCCTGGACACGTGTTATaGAAGGAACACTGTCTCCCCCACATGCTCACATGGCCCAAATCC +
Preference number: 1 (lower is better)
Translates to: HLLCLGALAVPGHVL*KEHCLPHMLTWPKS
Trigger: GGATTTGGGCCATGTGAGCATGTGGGGGAGACAGTGTTCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp GCCAACCTCTCTACACCTGCTCTGCCTCGGAGCCCTGGCAGTCCCTaGACACGTGTTATGGAAGGAACACTGTCTCCCCCACATGCTCAC +
Preference number: 1 (lower is better)
Translates to: ANLSTPALPRSPGSP*TRVMEGTLSPPHAH
Trigger: GTGAGCATGTGGGGGAGACAGTGTTCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp GGGAGATCAGGATTGGCCTTCAGGATGCCCTGCATTCCACTGCCTTaGCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTC +
Preference number: 1 (lower is better)
Translates to: GRSGLAFRMPCIPLP*LWLGHPAWTCHGHF
Trigger: GAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCTGATCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TCAGGATTGGCCTTCAGGATGCCCTGCATTCCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: SGLAFRMPCIPLPCL*LGHPAWTCHGHFWA
Trigger: AGCCCAGAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTaGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCACACTGCCCTC +
Preference number: 1 (lower is better)
Translates to: FFPVEVGSVSPNPPK*LGEGCEAQGTHTAL
Trigger: GAGGGCAGTGTGGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TCCCAGCTCCATTTCCTCAACTCAGGGAAACCACTGGGCTCTACCTaGTTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCA +
Preference number: 1 (lower is better)
Translates to: SQLHFLNSGKPLGST*FPLPGLQPENSLQA
Trigger: TGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAACCAGGTAGAGCCCAGTGGTTTCCCTGAGTTGAGGAAATGGAGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp AACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCCCTaGCAGTCCCTGGACACGTGTTATGGAAGGAACACTGTCTCCCCC +
Preference number: 1 (lower is better)
Translates to: NIHSQPLYTCSASEP*QSLDTCYGRNTVSP
Trigger: GGGGGAGACAGTGTTCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp CTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGAAAGATGTGGTCTaGGAGATCAGGATTGGCCTTCAGGATGCCCTGCATTCCACTGCC +
Preference number: 1 (lower is better)
Translates to: LQVILAKRLMVKDVV*EIRIGLQDALHSTA
Trigger: GGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGACCACATCTTTCACCATCAGCCTCTTGGCCAGGATGACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp CATGGAGACAAGACCCCCAGGCAGCTATGTTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTT +
Preference number: 1 (lower is better)
Translates to: HGDKTPRQLCFSLWK*GVSAQILPSGWVKV
Trigger: AACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACATAGCTGCCTGGGGGTCTTGTCTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 90 bp TCAAGAACCTCCTTGAGGGCTGCCCACCTTCCCTTGGATCTGTCATaGAGAGGGCCCATGGAGACAAGACCCCCAGGCAGCTATGTTTTT +
Preference number: 1 (lower is better)
Translates to: SRTSLRAAHLPLDLS*RGPMETRPPGSYVF
Trigger: AAAAACATAGCTGCCTGGGGGTCTTGTCTCCATGGGCCCTCTCCATGACAGATCCAAGGGAAGGTGGGCAGCCCTCAAGGAGGTTCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR TCA 90 bp GGTTCTACAGACTTTACAGAGGGCTTACTATGTTCCATTGAACTGTaGGGGCCAGGAGTGGACCAGAGATGCTGGCCCCTGTCCCGATGG +
Preference number: 1 (lower is better)
Translates to: GSTDFTEGLLCSIEL*GPGVDQRCWPLSRW
Trigger: CCATCGGGACAGGGGCCAGCATCTCTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGCCCTCTGTAAAGTCTGTAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp ACCTCCGTCCACCCTACTTCTTGTCAAGGGATTGGTAGAGCCAGTTaGATTCTAGCAGGGACTGGGCTGGAGTCACTGGCTAGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: TSVHPTSCQGIGRAS*ILAGTGLESLARLL
Trigger: AAGCAGCCTAGCCAGTGACTCCAGCCCAGTCCCTGCTAGAATTCAACTGGCTCTACCAATCCCTTGACAAGAAGTAGGGTGGACGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp GTTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTaGCTCGGAGCCCTGGCAGTCCCTGGACACGTGTTATGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: VFNIQHSQPTSLHLL*LGALAVPGHVLWKE
Trigger: TTCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp GGCACTAAGGCATGCCAAGAATACTGCTGCTGCTACATAGGGGACTaGGGCAAATGCCATGCCATCTTCAGGGCTCTTGAGAGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: GTKACQEYCCCYIGD*GKCHAIFRALESVC
Trigger: ACACACACTCTCAAGAGCCCTGAAGATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGCCTTAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp GACACCAGCCTGAGAAACACATCTGGGTTCTGGCTCGTCTACTCATaGACTGAAGGACCGTTTACTGAACAGCGACTCTGTGCTTGGGAC +
Preference number: 1 (lower is better)
Translates to: DTSLRNTSGFWLVYS*TEGPFTEQRLCAWD
Trigger: GTCCCAAGCACAGAGTCGCTGTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAGGCTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp TTCCTCTGGTTCTACAGACTTTACAGAGGGCTTACTATGTTCCATTaGACTGTGAGGGCCAGGAGTGGACCAGAGATGCTGGCCCCTGTC +
Preference number: 1 (lower is better)
Translates to: FLWFYRLYRGLTMFH*TVRARSGPEMLAPV
Trigger: GACAGGGGCCAGCATCTCTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGCCCTCTGTAAAGTCTGTAGAACCAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp CCCTATGCATGCACTGGAGAACTTCCTGAAAGAAGAAAAGGGAACTaGGACCCACATGAGGCCTGGACTATGTTAGGGGTGGCCTGCATG +
Preference number: 1 (lower is better)
Translates to: PYACTGELPERRKGN*DPHEAWTMLGVACM
Trigger: CATGCAGGCCACCCCTAACATAGTCCAGGCCTCATGTGGGTCTCAGTTCCCTTTTCTTCTTTCAGGAAGTTCTCCAGTGCATGCATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp CATATGTTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTaGTCTGCCTCGGAGCCCTGGCAGTCCCTGGACACGTGTTATGGA +
Preference number: 1 (lower is better)
Translates to: HMFSTSNIHSQPLYT*SASEPWQSLDTCYG
Trigger: TCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAACATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp GGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTTTCGCAAGGTaGGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCAC +
Preference number: 1 (lower is better)
Translates to: GRCIQGYTQRPLFAR*GGACIQGNTAFSSH
Trigger: GTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp TCCTCTCTCTCTCCTTCTCTCTCTCTCATCCCTGGGACTCTGCCTTaGAAATTTAAGCCACTTTGTCCTCCCTGGATTCCCAGCTCCATT +
Preference number: 1 (lower is better)
Translates to: SSLSPSLSLIPGTLP*KFKPLCPPWIPSSI
Trigger: AATGGAGCTGGGAATCCAGGGAGGACAAAGTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGAGAGAGAGAGAAGGAGAGAGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp GCAAGAGGCAAGCTCAACCATGAGAGCACAATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACCACATTAGTCAAAGTGGGCCATGAC +
Preference number: 1 (lower is better)
Translates to: ARGKLNHESTIQASA*IRFANTTLVKVGHD
Trigger: GTCATGGCCCACTTTGACTAATGTGGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAATTGTGCTCTCATGGTTGAGCTTGCCTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp AATTTCTCCCATTTGCAGAGGCCAGTGAACTCTGGGAAGGTGCACTaGTGTCAAGCATGTGTCCATATCAAAGGCTGGGCTTCCATTAGG +
Preference number: 1 (lower is better)
Translates to: NFSHLQRPVNSGKVH*CQACVHIKGWASIR
Trigger: CCTAATGGAAGCCCAGCCTTTGATATGGACACATGCTTGACAGCAGTGCACCTTCCCAGAGTTCACTGGCCTCTGCAAATGGGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp TTTTCTCCTCTCTCTCTCCTTCTCTCTCTCTCATCCCTGGGACTCTaGCTTGCAAATTTAAGCCACTTTGTCCTCCCTGGATTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: FSPLSLLLSLSSLGL*LANLSHFVLPGFPA
Trigger: AGCTGGGAATCCAGGGAGGACAAAGTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGAGAGAGAGAGAAGGAGAGAGAGAGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp AAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACTTTGCATaGTGTCTCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACC +
Preference number: 1 (lower is better)
Translates to: KSTLAVQFHLNLDFA*CLLSPAGTLCDADT
Trigger: GGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGAGACAGCATGCAAAGTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
3UTR GCA 90 bp TTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATAATTCATGGATGGATATTTCCTGGA +
Preference number: 1 (lower is better)
Translates to: FTSEARASEGRCLHL*FILAGIIHGWIFPG
Trigger: TCCAGGAAATATCCATCCATGAATTATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR TCA 90 bp TGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCCACTaGTCCCAGGTGGATTGCTGGAAAGTCTTTTCAAAACATTGCATC +
Preference number: 1 (lower is better)
Translates to: WPRVNSDTSCHPWLH*SQVDCWKVFSKHCI
Trigger: GATGCAATGTTTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp CCCAACACAGTGTTATCTCAGGAAATTATTCCACCTGCTTCCTCCTaGTGGTTCTTTCCCCTGCCTTGGGTAATTTCTTCACATGCAGAT +
Preference number: 1 (lower is better)
Translates to: PNTVLSQEIIPPASS*WFFPLPWVISSHAD
Trigger: ATCTGCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCCTGAGATAACACTGTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp ATAAAGCAGTTAACTCTGAAAAGGTTGCTGCTTCCTCCTATTCCTTaGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTTTCGCAAG +
Preference number: 1 (lower is better)
Translates to: IKQLTLKRLLLPPIP*EMHSGLHSEATFRK
Trigger: CTTGCGAAAAGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAGCAACCTTTTCAGAGTTAACTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 90 bp ATGAACTCTTCCCAACACAGTGTTATCTCAGGAAATTATTCCACCTaGTTCCTCCTGGTGGTTCTTTCCCCTGCCTTGGGTAATTTCTTC +
Preference number: 1 (lower is better)
Translates to: MNSSQHSVISGNYST*FLLVVLSPALGNFF
Trigger: GAAGAAATTACCCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCCTGAGATAACACTGTGTTGGGAAGAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp AACACAGTGTTATCTCAGGAAATTATTCCACCTGCTTCCTCCTGGTaGTTCTTTCCCCTGCCTTGGGTAATTTCTTCACATGCAGATGTT +
Preference number: 1 (lower is better)
Translates to: NTVLSQEIIPPASSW*FFPLPWVISSHADV
Trigger: AACATCTGCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCCTGAGATAACACTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 90 bp CTTTCTCTGTCTCTGTCACCTCTGACTCCTCAGAACTTAGCACAATaGATGGCACATCCTTGTCAAAACAATGACCAGATGAATGAGACA +
Preference number: 1 (lower is better)
Translates to: LSLSLSPLTPQNLAQ*MAHPCQNNDQMNET
Trigger: TGTCTCATTCATCTGGTCATTGTTTTGACAAGGATGTGCCATCCATTGTGCTAAGTTCTGAGGAGTCAGAGGTGACAGAGACAGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 90 bp CTCTTGCGGATCAATCATACCCTATATTGCTTGTTATCCAATGGCTaGAAACCATTGGTTTGTATAGAGGATTTTGTCTCATTTTTAGTC +
Preference number: 1 (lower is better)
Translates to: LLRINHTLYCLLSNG*KPLVCIEDFVSFLV
Trigger: GACTAAAAATGAGACAAAATCCTCTATACAAACCAATGGTTTTCAGCCATTGGATAACAAGCAATATAGGGTATGATTGATCCGCAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCLALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACTCTCAGCAGAGCCCCTaGGAGCTGCCCACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHSQQSP*ELPTVL
Trigger: GAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGA...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACGCCTTCAGGATGCCCTaGATTCCACTGCCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHAFRMP*IPLPCL
Trigger: CAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGC...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCTGCCCCTAGCACTCTaGCCTTGCCTGGCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMLPLAL*PCLALP
Trigger: TGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAG...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCTGCCCCTAGCACTCTaGCCTTGCCTGGCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: DTAVQALPPGHPGQEADGLPLAL*PCLALP
Trigger: TGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEACPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCCCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPPLPCL*LGHPAW
Trigger: CCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGG...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 2 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGGCTGGGACATCCTaGCTGGACCTGTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMVAGTS*LDLSWP
Trigger: TGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCAC...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGATTGGCCTTCAGGATaGCCTGCATTCCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSDWPSG*PAFHCL
Trigger: AAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCAAGGTACCCACACTaGCCTCTCTCAAGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCPRYPH*PLSSSQ
Trigger: CTGAGAGCTTGAGAGAGGGCAGTGTGGGTACCTTGG...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTGCCTTGCCTGTGGCTaGGACATCCTGCCTGGACCT +
Preference number: 2 (lower is better)
Translates to: DTAVQALPPGHPGQEADGCLACG*DILPGP
Trigger: AGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGAAACTCCTGACCTCGTaGTCCGCCAGCCTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLKLLTS*SASLSL
Trigger: GAGACTGAGGCTGGCGGATCACGAGGTCAGGAGTTT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGAGCCTCCCGAGTAGCTaGGACTACAGGCGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLSLPSS*DYRRLL
Trigger: TAGCAAGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPLALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCGTGGCTGGGACATCCTaGCTGGACCTGTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSVAGTS*LDLSWP
Trigger: TGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCAC...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGCCTTCAGGATGCCCTaGATTCCACTGCCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPAFRMP*IPLPCL
Trigger: CAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCCCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCC +
Preference number: 2 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSPLFSG*YDVLRP
Trigger: GGGTCTAAGGACATCATAGCACCCAGAGAACAGTGG...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATGGGTTGGAACCCCCTaGCCCAGGGGGCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPWVGTP*PRGQFF
Trigger: GAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTCCGCTGCCCCTCCCTaGCTGCAGCTGGGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATSAAPP*LQLGWN
Trigger: GTTCCAACCCAGCTGCAGCCAGGGAGGGGCAGCGGA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp TGGGAGATCAGGATTGGCCTTCAGGATGCCCTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTT +
Preference number: 2 (lower is better)
Translates to: WEIRIGLQDALHSTA*PVAGTSCLDLSWPF
Trigger: AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCTGATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPRCLHL*FILAGI
Trigger: TATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGGAGTGGACCAGAGATaGTGGCCCCTGTCCCGATGG +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATGVDQR*WPLSRW
Trigger: CCATCGGGACAGGGGCCAGCATCTCTGGTCCACTCC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCCCTGCTTCTCTCTTTaGACCTTGCCGGGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLPCFSL*TLPGSH
Trigger: GTGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGAGTTCCCTCTCAGTGTaGGTGAAACTGGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLSSLSV*VKLAQP
Trigger: GGGCTGAGCCAGTTTCACCCACACTGAGAGGGAACT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTG +
Preference number: 2 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMTSLQQ*AEAFTL
Trigger: CAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGT...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR TCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCCACATTCCACTGGTGTaGGCATCCTCTGACATTATA +
Preference number: 2 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSHIPLV*ASSDII
Trigger: TATAATGTCAGAGGATGCTCACACCAGTGGAATGTG...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLCPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGACTGGGCTCAGGTCTaGTCTCTGGATGTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPDWAQV*SLDVPG
Trigger: GCCTGGAACATCCAGAGAGCAGACCTGAGCCCAGTC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCCAGGAGTTGGAGGCTaGCTAGTGAGGTATGGTCGC +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATPGVGG*LVRYGR
Trigger: GCGACCATACCTCACTAGTCAGCCTCCAACTCCTGG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTCAAGGGTAACCCTCTaGAGATCTCCAGAGCATGCT +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLSRVTL*RSPEHA
Trigger: AGCATGCTCTGGAGATCTTCAGAGGGTTACCCTTGA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: PAFHCLACGWDILPGPVMRCLHL*FILAGI
Trigger: TATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCG...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGATGTCCTTAGACCCTaGAGGGCAGATGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATDVLRP*RADGSL
Trigger: CAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCAAGAATACTGCTGCTaGTACATAGGGGACTGGGGC +
Preference number: 2 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSQEYCC*YIGDWG
Trigger: GCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCACACACTTTGCATATaGTCTGGACACCAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSHTLCI*SGHQWP
Trigger: GGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCACAAGTCCCCTTTTTaGCAAGCTCCACGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLHKSPF*QAPRPL
Trigger: CAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 2 (lower is better)
Translates to: LALPAAPATTGRMLWSAPTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTGGGTTGGAACCCCCTaGCCCAGGGGGCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCWVGTP*PRGQFF
Trigger: GAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACC +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLIQASA*IRFANT
Trigger: GGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAAT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCTCCAGGCTGTAGACTaGGCTCAGGTCTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLQAVD*AQVCSL
Trigger: CAGAGAGCAGACCTGAGCCCAGTCTACAGCCTGGAG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGGTGTGAGCATCCTCTaGCATTATATTTTGATGGTG +
Preference number: 2 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCGVSIL*HYILMV
Trigger: CACCATCAAAATATAATGTCAGAGGATGCTCACACC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCCACTTTTCGCAAGGTaGGGAGGAGCTTGTATTCAA +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLPLFAR*GGACIQ
Trigger: TTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 2 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 2 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTTGCTGCACACACTTTaGATATGCTCTGGACACCAG +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLLLHTL*ICSGHQ
Trigger: CTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGAGACTACAGGCGCTTaGTACCATGCCCAGCTAACC +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATETTGA*YHAQLT
Trigger: GGTTAGCTGGGCATGGTAGCAAGCGCCTGTAGTCTC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTACCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVPLPCL*LGHPAW
Trigger: CCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGG...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCATGGCTGTAGGTGGTaGTCCTGCTTTTCCATATAC +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLHGCRW*SCFSIY
Trigger: GTATATGGAAAAGCAGGACCACCACCTACAGCCATG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCTTACTATGTTCCATTaGACTGTGAGGGCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSLTMFH*TVRARS
Trigger: ACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCATCCGTGGCTCCACTaGTCCCAGGTGGATTGCTGG +
Preference number: 2 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKHPWLH*SQVDCW
Trigger: CCAGCAATCCACCTGGGATCAGTGGAGCCACGGATG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTTGGTCTCAAACTCCTaGCCTCGTGATCCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASELVSNS*PRDPPA
Trigger: GGCTGGCGGATCACGAGGTCAGGAGTTTGAGACCAA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGAGCCTCCCGAGTAGCTaGGACTACAGGCGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASESLPSS*DYRRLL
Trigger: TAGCAAGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCATCAAAGTCACTAGTTaGTCCCAGCAGCCCATAGTT +
Preference number: 2 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPIKVTS*SQQPIV
Trigger: AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGAT...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGATCAAAGTCACTAGTTaGTCCCAGCAGCCCATAGTT +
Preference number: 2 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMIKVTS*SQQPIV
Trigger: AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGAT...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCC +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPPLFSG*YDVLRP
Trigger: GGGTCTAAGGACATCATAGCACCCAGAGAACAGTGG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCGGAGTGGACCAGAGATaGTGGCCCCTGTCCCGATGG +
Preference number: 2 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLGVDQR*WPLSRW
Trigger: CCATCGGGACAGGGGCCAGCATCTCTGGTCCACTCC...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGGCCCCTTGGCCAGTTaGTGCACACACTTTGCATAT +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATGPLAS*CTHFAY
Trigger: ATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGACCCAATACCCAACCTaGCATCATTGTCCTAAGCTT +
Preference number: 2 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLTQYPT*HHCPKL
Trigger: AAGCTTAGGACAATGATGGCAGGTTGGGTATTGGGT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCAGCGACTCTGTGCTTaGGACACAGCAATGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATQRLCA*DTAMSK
Trigger: CTTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTGCTACATAGGGGACTaGGGCAAATGCCATGCCATC +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATCYIGD*GKCHAI
Trigger: GATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCTTGAGCCCAGGAGTTaGAGGCTGACTAGTGAGGTA +
Preference number: 2 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHLEPRS*RLTSEV
Trigger: TACCTCACTAGTCAGCCTCCAACTCCTGGGCTCAAG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp CTTCCTCTGGTTCTACAGACTTTACAGAGGGCTTACTATGTTCCATaGAACTGTGAGGGCCAGGAGTGGACCAGAGATGCTGGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: LPLVLQTLQRAYYVP*NCEGQEWTRDAGPC
Trigger: ACAGGGGCCAGCATCTCTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGCCCTCTGTAAAGTCTGTAGAACCAGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGATGTCCTTAGACCCTaGAGGGCAGATGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: THLGSGSSTHELKDRLLNDVLRP*RADGSL
Trigger: CAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATGCATGCCAAGAATACTaGTGCTGCTACATAGGGGAC +
Preference number: 2 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHACQEY*CCYIGD
Trigger: GTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGC...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCAACCTCTCTACACCTaGTCTGCCTCGGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWQPLYT*SASEPW
Trigger: CCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLCHGHF*ASKPEH
Trigger: GTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCTGACTAGTGAGGTATaGTCGCACCACTGCACCCCA +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASELTSEV*SHHCTP
Trigger: TGGGGTGCAGTGGTGCGACCATACCTCACTAGTCAG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATTTCCACAGGCTGCATaGAGAGACAATGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPFPQAA*RDNELC
Trigger: GCAGAGTTCATTGTCTCTCCATGCAGCCTGTGGAAA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp ACACCCCGCATGGGGCCATGCCACACATCTCTGTCAGTAAGGCCTTaGGATCCAGGAGATGATGTCTCAGTGGGAGATCTAATGTTGAAA +
Preference number: 2 (lower is better)
Translates to: TPRMGPCHTSLSVRP*DPGDDVSVGDLMLK
Trigger: TTTCAACATTAGATCTCCCACTGAGACATCATCTCCTGGATCCAAAGGCCTTACTGACAGAGATGTGTGGCATGGCCCCATGCGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGAGGCTGAGTATGGCTTaGGCCCAGGAGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWRLSMA*AQELEA
Trigger: AGCCTCCAACTCCTGGGCTCAAGCCATACTCAGCCT...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACTGTGATGCTGATACCTaGCCAGGGCCTTTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHCDADT*PGPLLK
Trigger: TTTCAGCAAAGGCCCTGGTCAGGTATCAGCATCACA...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
3UTR-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGTGGCTGGGACATCCTaGCTGGACCTGTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFVAGTS*LDLSWP
Trigger: TGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCAC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGCPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGCCAAGGGAGAGAGCTaGCAAATCGTTAAAAATAAA +
Preference number: 2 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMAKGES*QIVKNK
Trigger: TTTATTTTTAACGATTTGCCAGCTCTCTCCCTTGGC...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAA +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASECLDLS*PFLGFQ
Trigger: TTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTTGCCTTGCCTGTGGCTaGGACATCCTGCCTGGACCT +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFCLACG*DILPGP
Trigger: AGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCA...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTACATGTGTGTTCCATaGACTCTTGGGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATYMCVP*TLGEAS
Trigger: AGAAGCCTCCCCAAGAGTCCATGGAACACACATGTA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATCCACTGATCCCAGGTaGATTGCTGGAAAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPSTDPR*IAGKSF
Trigger: AAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCTCCTGGGCTGCAGCCTaGAAACTCACTGCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLSWAAA*KLTAGS
Trigger: ACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGA...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTTACTGGAAACAATTTaGCTCCTTTGGGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLLETI*LLWGWL
Trigger: AAGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 2 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCCHGHF*ASKPEH
Trigger: GTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATC +
Preference number: 2 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCFSLWK*GVSAQI
Trigger: GATTTGGGCTGACACTCCCCACTTCCACAGGGAAAA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGACCCTTGGATCTGTCATaGAGAGGGCCCATGGAGACA +
Preference number: 2 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGPLDLS*RGPMET
Trigger: TGTCTCCATGGGCCCTCTCCATGACAGATCCAAGGG...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGGTGTGAGCATCCTCTaGCATTATATTTTGATGGTG +
Preference number: 2 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATGVSIL*HYILMV
Trigger: CACCATCAAAATATAATGTCAGAGGATGCTCACACC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGAGAGTGACACCAGCCTaGGAAACACATCTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKRVTPA*ETHLGS
Trigger: AGAACCCAGATGTGTTTCTCAGGCTGGTGTCACTCT...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCGGCCCCTTGGCCAGTTaGTGCACACACTTTGCATAT +
Preference number: 2 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLGPLAS*CTHFAY
Trigger: ATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCC...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCACAATTCAAGCCTCTaGCTGGATCAGGTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEHNSSL*LDQVCQ
Trigger: TTGGCAAACCTGATCCAGGCAGAGGCTTGAATTGTG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGAGACTACAGGCGCTTaGTACCATGCCCAGCTAACC +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFETTGA*YHAQLT
Trigger: GGTTAGCTGGGCATGGTAGCAAGCGCCTGTAGTCTC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCTGGGACATCCTGCCTaGACCTGTCATGGCCATTTC +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLLGHPA*TCHGHF
Trigger: GAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTCTCTGGCAGGGTATGTaGCTCATGCCTGCAATCCCA +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGLWQGM*LMPAIP
Trigger: TGGGATTGCAGGCATGAGCCACATACCCTGCCAGAG...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCTCTGGCAGGGTATGTaGCTCATGCCTGCAATCCCA +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFLWQGM*LMPAIP
Trigger: TGGGATTGCAGGCATGAGCCACATACCCTGCCAGAG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCGAGCAAAAGGCCCCTTaGCCAGTTGCTGCACACACT +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLEQKAP*PVAAHT
Trigger: AGTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTC...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGTCCATATCAAAGGCTaGGCTTCCATTAGGGGATGT +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEVHIKG*ASIRGC
Trigger: ACATCCCCTAATGGAAGCCCAGCCTTTGATATGGAC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGGGCAGCAGCTACCCATaGCATGTTCATCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWGSSYP*HVHPKR
Trigger: TCTCTTGGGATGAACATGCCATGGGTAGCTGCTGCC...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp TCAGGGCTACACTCAGAGGCCACTTTTCGCAAGGTGAGGAGGAGCTaGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGACACAT +
Preference number: 2 (lower is better)
Translates to: SGLHSEATFRKVRRS*YSRKHCFFLPHLTH
Trigger: ATGTGTCAAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGGCCTCTGAGTGTAGCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCCATAGAACAGCAAGCTaGATCTCCCCTTCACTCTGG +
Preference number: 2 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLHRTAS*ISPSLW
Trigger: CCAGAGTGAAGGGGAGATTCAGCTTGCTGTTCTATG...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 2 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATCCAGGTGCCACTCCTaGTCACCCTCCGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAESRCHS*SPSAAP
Trigger: AGGGGCAGCGGAGGGTGAGCAGGAGTGGCACCTGGA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAAGCTTCATTTCCAGGTaGCACTCCTGCTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVSFISR*HSCSPS
Trigger: GGAGGGTGAGCAGGAGTGGCACCTGGAAATGAAGCT...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCACACACTTTGCATATaGTCTGGACACCAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLHTLCI*SGHQWP
Trigger: GGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATGCCAAGGGAGAGAGCTaGCAAATCGTTAAAAATAAA +
Preference number: 2 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHAKGES*QIVKNK
Trigger: TTTATTTTTAACGATTTGCCAGCTCTCTCCCTTGGC...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCACTTTGCATATGCTCTaGACACCAGTGGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLTLHML*TPVAPD
Trigger: ATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGT...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATTGCTTGTTATCCAATaGCTGAAAACCATTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPLLVIQ*LKTIGL
Trigger: CAAACCAATGGTTTTCAGCCATTGGATAACAAGCAA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCAACTGTGCCATGCCTaGGGCTGTTTCTATTTGTTT +
Preference number: 2 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEQLCHA*GCFYLF
Trigger: AAACAAATAGAAACAGCCCCAGGCATGGCACAGTTG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp GCTCCACTGATCCCAGGTGGATTGCTGGAAAGTCTTTTCAAAACATaGCATCAATTTCTCCCATTTGCAGAGGCCAGTGAACTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: APLIPGGLLESLFKT*HQFLPFAEASELWE
Trigger: TTCCCAGAGTTCACTGGCCTCTGCAAATGGGAGAAATTGATGCAATGTTTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 2 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTGCCAAGAATACTGCTaGTGCTACATAGGGGACTGG +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGCQEYC*CYIGDW
Trigger: CCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTTGCTGCACACACTTTaGATATGCTCTGGACACCAG +
Preference number: 2 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWLLHTL*ICSGHQ
Trigger: CTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLCHGHF*ASKPEH
Trigger: GTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACA...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATC +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGFSLWK*GVSAQI
Trigger: GATTTGGGCTGACACTCCCCACTTCCACAGGGAAAA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTAGACACCAGGAGCAGTaGACCAGCACTTTTATCCAG +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFRHQEQ*TSTFIQ
Trigger: CTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGTCT...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTAGACACCAGGAGCAGTaGACCAGCACTTTTATCCAG +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGRHQEQ*TSTFIQ
Trigger: CTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGTCT...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACTTTTTAGCAAGATCTaGGCAAGCTACATTTTAACT +
Preference number: 2 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPLFSKI*ASYILT
Trigger: AGTTAAAATGTAGCTTGCCCAGATCTTGCTAAAAAG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACC +
Preference number: 2 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLIQASA*IRFANT
Trigger: GGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAAT...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTaGGGAGGTTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCC +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTV*GGFSTLAVGNMNSS
Trigger: GGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp AATAAAGCAGTTAACTCTGAAAAGGTTGCTGCTTCCTCCTATTCCTaGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTTTCGCAA +
Preference number: 2 (lower is better)
Translates to: NKAVNSEKVAASSYS*GDAFRATLRGHFSQ
Trigger: TTGCGAAAAGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAGCAACCTTTTCAGAGTTAACTGCTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTCATCCCTGGGACTCTaGCTTGCAAATTTAAGCCAC +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGSSLGL*LANLSH
Trigger: GTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATCTCAGCAGAGCCCCTaGGAGCTGCCCACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAESQQSP*ELPTVL
Trigger: GAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTACCTGAGAAACACATCTaGGTTCTGGCTCGTCTACTC +
Preference number: 2 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVPEKHI*VLARLL
Trigger: GAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAGG...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTACATGTGTGTTCCATaGACTCTTGGGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGYMCVP*TLGEAS
Trigger: AGAAGCCTCCCCAAGAGTCCATGGAACACACATGTA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTCATGGCTGTAGGTGGTaGTCCTGCTTTTCCATATAC +
Preference number: 2 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGHGCRW*SCFSIY
Trigger: GTATATGGAAAAGCAGGACCACCACCTACAGCCATG...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCATCATGGCTGTAGGTaGTGGTCCTGCTTTTCCATA +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFHHGCR*WSCFSI
Trigger: TATGGAAAAGCAGGACCACCACCTACAGCCATGATG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp AGCTTTGTTAGGTGGGACCAGAGCAATCTATCATCTAGGACTAATTaGGCCCCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATG +
Preference number: 2 (lower is better)
Translates to: SFVRWDQSNLSSRTN*APLLRQYLMCLYTM
Trigger: CATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGGGGCCAAATTAGTCCTAGATGATAGATTGCTCTGGTCCCACCTAACAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR TCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCACATTCCACTGGTGTaGGCATCCTCTGACATTATA +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFHIPLV*ASSDII
Trigger: TATAATGTCAGAGGATGCTCACACCAGTGGAATGTG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTAGAAGGTTCCAAGAATaGTGGCACTTTCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFRRFQE*WHFLCL
Trigger: GAGACAGAGAAAGTGCCAGCATTCTTGGAACCTTCT...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 2 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR GCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 2 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTTGGCCCATATTTTCCTaGTTCTTTGCATGCCTGATT +
Preference number: 2 (lower is better)
Translates to: QGEEELVFKETLLFPPTFWPIFS*FFACLI
Trigger: AATCAGGCATGCAAAGAAGCAGGAAAATATGGGCCA...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 90 bp CCCCTCACTTGTTTCCCTTCTCTTGCGGATCAATCATACCCTATATaGCTTGTTATCCAATGGCTGAAAACCATTGGTTTGTATAGAGGA +
Preference number: 2 (lower is better)
Translates to: PLTCFPSLADQSYPI*LVIQWLKTIGLYRG
Trigger: TCCTCTATACAAACCAATGGTTTTCAGCCATTGGATAACAAGCAATATAGGGTATGATTGATCCGCAAGAGAAGGGAAACAAGTGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAGGTTTAATCTTCTCCTaGATGATCCTGTTACCCAGT +
Preference number: 2 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVGLIFS*MILLPS
Trigger: ACTGGGTAACAGGATCATGCAGGAGAAGATTAAACC...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGATCTCCCCTTCACTCTaGCCTTCTAATTATATAAAA +
Preference number: 2 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKISPSL*PSNYIK
Trigger: TTTTATATAATTAGAAGGCCAGAGTGAAGGGGAGAT...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAACCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCC +
Preference number: 2 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEPLFSG*YDVLRP
Trigger: GGGTCTAAGGACATCATAGCACCCAGAGAACAGTGG...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp AGGTGCCACTCCTGCTCACCCTCCGCTGCCCCTCCCTaGCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: RCHSCSPSAAPP*LQLGWNPLAQG
Trigger: CCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGCCAGGGAGGGGCAGCGGAGGGTGAGCAGGAGTGGCACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp GCTGAAGCCTTCACCCTGCCCCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGA +
Preference number: 3 (lower is better)
Translates to: AEAFTLPLALWP*LALPAAPATTG
Trigger: TCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAGGGTGAAGGCTTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CAA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCCTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCC +
Preference number: 3 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSLHSTA*PVAGTS
Trigger: GGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAG...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR TCA 72 bp GGCCTGGGGAGGGGCTGCCCTCCTGAGATCAGGAGCTaGGTGAATGGAGAGGGAAGAGTACCAGCTGGCATG +
Preference number: 3 (lower is better)
Translates to: GLGRGCPPEIRS*VNGEGRVPAGM
Trigger: CATGCCAGCTGGTACTCTTCCCTCTCCATTCACTCAGCTCCTGATCTCAGGAGGGCAGCCCCTCCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp AGCAGAGCCCCTGGGAGCTGCCCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCCTGCAGGGCAGATGGC +
Preference number: 3 (lower is better)
Translates to: SRAPGSCPLFSG*YDVLRPCRADG
Trigger: GCCATCTGCCCTGCAGGGTCTAAGGACATCATAGCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp TTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAAACCAGAGCACGGGCC +
Preference number: 3 (lower is better)
Translates to: LPVAGTSCLDLS*PFLGFQTRARA
Trigger: GGCCCGTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp GGATTGGCCTTCAGGATGCCCTGCATTCCACTGCCTTaGCTGTGGCTGGGACATCCTGCCTGGACCTGTCAT +
Preference number: 3 (lower is better)
Translates to: GLAFRMPCIPLP*LWLGHPAWTCH
Trigger: ATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp CTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCACGGGCCAAGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LGHPAWTCHGHF*ASKPEHGPRER
Trigger: TCTCTCCCTTGGCCCGTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp GTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTaGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCAC +
Preference number: 3 (lower is better)
Translates to: VEVGSVSPNPPK*LGEGCEAQGTH
Trigger: GTGGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp GACCCACATGAGGCCTGGACTATGTTAGGGGTGGCCTaGATGGATGACGTTGTTGGTCATGGCTGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: DPHEAWTMLGVA*MDDVVGHGWSQ
Trigger: CTGGGACCAGCCATGACCAACAACGTCATCCATGCAGGCCACCCCTAACATAGTCCAGGCCTCATGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp AAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTaGGTGAAGGTTGTGAGGCCCAAGGTACCCACACTG +
Preference number: 3 (lower is better)
Translates to: KWGVSAQILPSG*VKVVRPKVPTL
Trigger: CAGTGTGGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp AGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCCCTaGCAGTCCCTGGACACGTGTTATGGAAGGAACACT +
Preference number: 3 (lower is better)
Translates to: SQPLYTCSASEP*QSLDTCYGRNT
Trigger: AGTGTTCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp CATGCTGCTTGCTCTTTGCTGAGTTCCCTCTCAGTGTaGGTGAAACTGGCTCAGCCCTGCTGGCTGGCACGA +
Preference number: 3 (lower is better)
Translates to: HAACSLLSSLSV*VKLAQPCWLAR
Trigger: TCGTGCCAGCCAGCAGGGCTGAGCCAGTTTCACCCACACTGAGAGGGAACTCAGCAAAGAGCAAGCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp AGGGCTGAGGGCACTAAGGCATGCCAAGAATACTGCTaGTGCTACATAGGGGACTGGGGCAAATGCCATGCC +
Preference number: 3 (lower is better)
Translates to: RAEGTKACQEYC*CYIGDWGKCHA
Trigger: GGCATGGCATTTGCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGCCTTAGTGCCCTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp AGGCCCCTTGGCCAGTTGCTGCACACACTTTGCATATaGTCTGGACACCAGTGGCCCCAGATCCCATGTTGT +
Preference number: 3 (lower is better)
Translates to: RPLGQLLHTLCI*SGHQWPQIPCC
Trigger: ACAACATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp GGGATGTTCGGAGCAAAAGGCCCCTTGGCCAGTTGCTaGACACACTTTGCATATGCTCTGGACACCAGTGGC +
Preference number: 3 (lower is better)
Translates to: GMFGAKGPLASC*THFAYALDTSG
Trigger: GCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTCCGAACATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAACACTCCCACCCACCTaGATAGTGAGTCCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPTLPPT*IVSPSP
Trigger: TGGGCTTGGACTCACTATCAAGGTGGGTGGGAGTGT...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATCCCTGCTTCTCTCTTaGCACCTTGCCGGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPSLLLS*HLAGFS
Trigger: TGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGGA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp GCTGAGGGCACTAAGGCATGCCAAGAATACTGCTGCTaGTACATAGGGGACTGGGGCAAATGCCATGCCATC +
Preference number: 3 (lower is better)
Translates to: AEGTKACQEYCC*YIGDWGKCHAI
Trigger: GATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGCCTTAGTGCCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp CCCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTaGCTCTTCCCATCACCCAATACCCAACCTGCCATC +
Preference number: 3 (lower is better)
Translates to: PTSPLFAKLHVL*LFPSPNTQPAI
Trigger: GATGGCAGGTTGGGTATTGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp AGTCAGAGCCTGGGGGAAGTCAGAGTGACACCAGCCTaGGAAACACATCTGGGTTCTGGCTCGTCTACTCAT +
Preference number: 3 (lower is better)
Translates to: SQSLGEVRVTPA*ETHLGSGSSTH
Trigger: ATGAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAGGCTGGTGTCACTCTGACTTCCCCCAGGCTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp GACTTTACAGAGGGCTTACTATGTTCCATTGAACTGTaGGGGCCAGGAGTGGACCAGAGATGCTGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: DFTEGLLCSIEL*GPGVDQRCWPL
Trigger: CAGGGGCCAGCATCTCTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGCCCTCTGTAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp CTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTaGCCAGGGCCTTTGCTGAAACAGATCCTGCCTCAC +
Preference number: 3 (lower is better)
Translates to: LSPAGTLCDADT*PGPLLKQILPH
Trigger: GTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
3UTR CCA 72 bp ATCCTGGCCAAGAGGCTGATGGTGAAAGATGTGGTCTaGGAGATCAGGATTGGCCTTCAGGATGCCCTGCAT +
Preference number: 3 (lower is better)
Translates to: ILAKRLMVKDVV*EIRIGLQDALH
Trigger: ATGCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGACCACATCTTTCACCATCAGCCTCTTGGCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CCA 72 bp GCATGCCAAGAATACTGCTGCTGCTACATAGGGGACTaGGGCAAATGCCATGCCATCTTCAGGGCTCTTGAG +
Preference number: 3 (lower is better)
Translates to: ACQEYCCCYIGD*GKCHAIFRALE
Trigger: CTCAAGAGCCCTGAAGATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp CCTTGGCCAGTTGCTGCACACACTTTGCATATGCTCTaGACACCAGTGGCCCCAGATCCCATGTTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: PWPVAAHTLHML*TPVAPDPMLCV
Trigger: AACACACAACATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACTGGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp GGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTaGAGCAATCATAGGGCTCCCCTCACTTGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: GLQPENSLQAVS*SNHRAPLTCFP
Trigger: AGGGAAACAAGTGAGGGGAGCCCTATGATTGCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTCTGGGAGATCAGGATaGGCCTTCAGGATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCSGRSG*AFRMPC
Trigger: GCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp GCTGTAGGTGGTGGTCCTGCTTTTCCATATACAGGATaGTCTCAGTGCCTTTCCACAGGCTGCATGGAGAGA +
Preference number: 3 (lower is better)
Translates to: AVGGGPAFPYTG*SQCLSTGCMER
Trigger: TCTCTCCATGCAGCCTGTGGAAAGGCACTGAGAGCATCCTGTATATGGAAAAGCAGGACCACCACCTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp CGTCCTTTGCCTCTTCCCATCACCCAATACCCAACCTaGCATCATTGTCCTAAGCTTCCCTTCCCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: RPLPLPITQYPT*HHCPKLPFPAS
Trigger: AGAAGCAGGGAAGGGAAGCTTAGGACAATGATGGCAGGTTGGGTATTGGGTGATGGGAAGAGGCAAAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp GTGCACTGCTGTCAAGCATGTGTCCATATCAAAGGCTaGGCTTCCATTAGGGGATGTTCGGAGCAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: VHCCQACVHIKG*ASIRGCSEQKA
Trigger: GGCCTTTTGCTCCGAACATCCCCTAATGGAAGCCCAGCCTTTGATATGGACACATGCTTGACAGCAGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGTGGGAGATCTAATGTaGAAAGACTCTGGCAGGGTA +
Preference number: 3 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATVGDLM*KDSGRV
Trigger: TACCCTGCCAGAGTCTTTCAACATTAGATCTCCCAC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCTTACTGGAAACAATTaGACTCCTTTGGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLTGNN*TPLGLA
Trigger: AGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAAG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTTTTTCTGCCTAGATTaGAAACACACACCCATTGCA +
Preference number: 3 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLFFCLD*KHTPIA
Trigger: TGCAATGGGTGTGTGTTTCAAATCTAGGCAGAAAAA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp TCTCCTTCTCTCTCTCTCATCCCTGGGACTCTGCCTTaGAAATTTAAGCCACTTTGTCCTCCCTGGATTCCC +
Preference number: 3 (lower is better)
Translates to: SPSLSLIPGTLP*KFKPLCPPWIP
Trigger: GGGAATCCAGGGAGGACAAAGTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGAGAGAGAGAGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp ACTGAAGGACCGTTTACTGAACAGCGACTCTGTGCTTaGGACACAGCAATGAGCAAGACAAACAGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: TEGPFTEQRLCA*DTAMSKTNRSL
Trigger: CAGGGACCTGTTTGTCTTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTGTTCAGTAAACGGTCCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR-3UTR CAA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATATACAATGACTGTTTaGGGAGGTTTCTCCACTCTG +
Preference number: 3 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPYTMTV*GGFSTL
Trigger: CAGAGTGGAGAAACCTCCCAAAACAGTCATTGTATA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGGATTGTCTTGCTTACTaGTTTATTGTCCCTCTCTTT +
Preference number: 3 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLDCLAY*FIVPLF
Trigger: AAAGAGAGGGACAATAAACAAGTAAGCAAGACAATC...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp TTACTGAACAGCGACTCTGTGCTTGGGACACAGCAATaGGCAAGACAAACAGGTCCCTGTTGCATTGGAGCT +
Preference number: 3 (lower is better)
Translates to: LLNSDSVLGTQQ*ARQTGPCCIGA
Trigger: AGCTCCAATGCAACAGGGACCTGTTTGTCTTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTGTTCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp AAGAGAGATCACTGGAGCAAGAGGCAAGCTCAACCATaGGAGCACAATTCAAGCCTCTGCCTGGATCAGGTT +
Preference number: 3 (lower is better)
Translates to: KRDHWSKRQAQP*EHNSSLCLDQV
Trigger: AACCTGATCCAGGCAGAGGCTTGAATTGTGCTCTCATGGTTGAGCTTGCCTCTTGCTCCAGTGATCTCTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp TGCACTGGAGAACTTCCTGAAAGAAGAAAAGGGAACTaGGACCCACATGAGGCCTGGACTATGTTAGGGGTG +
Preference number: 3 (lower is better)
Translates to: CTGELPERRKGN*DPHEAWTMLGV
Trigger: CACCCCTAACATAGTCCAGGCCTCATGTGGGTCTCAGTTCCCTTTTCTTCTTTCAGGAAGTTCTCCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR GCA 72 bp GAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATAATTCATGGATGGATA +
Preference number: 3 (lower is better)
Translates to: EARASEGRCLHL*FILAGIIHGWI
Trigger: TATCCATCCATGAATTATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp TCCCAACACAGTGTTATCTCAGGAAATTATTCCACCTaGTTCCTCCTGGTGGTTCTTTCCCCTGCCTTGGGT +
Preference number: 3 (lower is better)
Translates to: SQHSVISGNYST*FLLVVLSPALG
Trigger: ACCCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCCTGAGATAACACTGTGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCTGTGCCAGTCTGCTATaGCTACAATTAATGCTATAT +
Preference number: 3 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSCASLL*LQLMLY
Trigger: ATATAGCATTAATTGTAGCAATAGCAGACTGGCACA...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGGCTTCCTCCTATTCCTaGGGAGATGCATTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWASSYS*GDAFRA
Trigger: AGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGC...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp GCTTATAAAGATCTACACAAAACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTGCCCCTAGCACTCTGG +
Preference number: 3 (lower is better)
Translates to: AYKDLHKTSLQQ*AEAFTLPLALW
Trigger: CCAGAGTGCTAGGGGCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR TCA 72 bp CTGAGAAACACATCTGGGTTCTGGCTCGTCTACTCATaGACTGAAGGACCGTTTACTGAACAGCGACTCTGT +
Preference number: 3 (lower is better)
Translates to: LRNTSGFWLVYS*TEGPFTEQRLC
Trigger: ACAGAGTCGCTGTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp TTCTACAGACTTTACAGAGGGCTTACTATGTTCCATTaGACTGTGAGGGCCAGGAGTGGACCAGAGATGCTG +
Preference number: 3 (lower is better)
Translates to: FYRLYRGLTMFH*TVRARSGPEML
Trigger: CAGCATCTCTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGCCCTCTGTAAAGTCTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp ATCAGGTCCTTGTTGCTTCATCATGGCTGTAGGTGGTaGTCCTGCTTTTCCATATACAGGATGCTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: IRSLLLHHGCRW*SCFSIYRMLSV
Trigger: CACTGAGAGCATCCTGTATATGGAAAAGCAGGACCACCACCTACAGCCATGATGAAGCAACAAGGACCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCGTTGCTGCACACACTTaGCATATGCTCTGGACACCA +
Preference number: 3 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLVAAHT*HMLWTP
Trigger: TGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAAC...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCTGATCCCAGGTGGATaGCTGGAAAGTCTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: FSTSNIHSQPLYTCSASELIPGG*LESLFK
Trigger: TTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGCTTACTATGTTCCATaGAACTGTGAGGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: QGEEELVFKETLLFPPTFAYYVP*NCEGQE
Trigger: CTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCGTGTTCCATGGACTCTaGGGGAGGCTTCTAGAATCA +
Preference number: 3 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLVFHGL*GRLLES
Trigger: TGATTCTAGAAGCCTCCCCAAGAGTCCATGGAACAC...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp ATTCAGGGCTACACTCAGAGGCCACTTTTCGCAAGGTaGGGAGGAGCTTGTATTCAAGGAAACACTGCTTTT +
Preference number: 3 (lower is better)
Translates to: IQGYTQRPLFAR*GGACIQGNTAF
Trigger: AAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGGCCTCTGAGTGTAGCCCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp AAGCTCAACCATGAGAGCACAATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACCACATTAGTCAAAGTG +
Preference number: 3 (lower is better)
Translates to: KLNHESTIQASA*IRFANTTLVKV
Trigger: CACTTTGACTAATGTGGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAATTGTGCTCTCATGGTTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAACTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCC +
Preference number: 3 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAELHSTA*PVAGTS
Trigger: GGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAG...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR GCA 72 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTaGTTCATCATGGCTGTAGGTGGTGGTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: SHLKQEGKSGPC*FIMAVGGGPAF
Trigger: AAAAGCAGGACCACCACCTACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGATTGTCTTGCTTACTaGTTTATTGTCCCTCTCTTT +
Preference number: 3 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEDCLAY*FIVPLF
Trigger: AAAGAGAGGGACAATAAACAAGTAAGCAAGACAATC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp AGAGGGGACATTTGTCAGTGGCATAGAACAGCAAGCTaGATCTCCCCTTCACTCTGGCCTTCTAATTATATA +
Preference number: 3 (lower is better)
Translates to: RGDICQWHRTAS*ISPSLWPSNYI
Trigger: TATATAATTAGAAGGCCAGAGTGAAGGGGAGATTCAGCTTGCTGTTCTATGCCACTGACAAATGTCCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR TCA 72 bp CAGGTTTGCCAACACCACATTAGTCAAAGTGGGCCATaGCAAAGCTTTGGATGTGTAATTCTATACTGGTGG +
Preference number: 3 (lower is better)
Translates to: QVCQHHISQSGP*QSFGCVILYWW
Trigger: CCACCAGTATAGAATTACACATCCAAAGCTTTGTCATGGCCCACTTTGACTAATGTGGTGTTGGCAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp ATACTTCTTGTCATCCGTGGCTCCACTGATCCCAGGTaGATTGCTGGAAAGTCTTTTCAAAACATTGCATCA +
Preference number: 3 (lower is better)
Translates to: ILLVIRGSTDPR*IAGKSFQNIAS
Trigger: TGATGCAATGTTTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGAGCCACGGATGACAAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp GACTCCTTTGGGGCTGGCTTTTTAAGCTTTGTTAGGTaGGACCAGAGCAATCTATCATCTAGGACTAATTTG +
Preference number: 3 (lower is better)
Translates to: DSFGAGFLSFVR*DQSNLSSRTNL
Trigger: CAAATTAGTCCTAGATGATAGATTGCTCTGGTCCCACCTAACAAAGCTTAAAAAGCCAGCCCCAAAGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR TCA 72 bp TTTTGGGAGGTTTCTCCACTCTGGCTGTTGGAAACATaGACTCTTCCCAACACAGTGTTATCTCAGGAAATT +
Preference number: 3 (lower is better)
Translates to: FWEVSPLWLLET*TLPNTVLSQEI
Trigger: AATTTCCTGAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAACCTCCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CCA 72 bp AAACAGGTCCCTGTTGCATTGGAGCTCTTAGTATTATaGGGGGTTGCAGGTATTTCAAAAATAGGCAAGTTC +
Preference number: 3 (lower is better)
Translates to: KQVPVALELLVL*GVAGISKIGKF
Trigger: GAACTTGCCTATTTTTGAAATACCTGCAACCCCCCATAATACTAAGAGCTCCAATGCAACAGGGACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCCTGCCCCTCCCTGGCTaGAGCTGGGTTGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSLPLPG*SWVGTP
Trigger: GGGGGTTCCAACCCAGCTGCAGCCAGGGAGGGGCAG...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGGCCTGGGGAGGGGCTaGCCTCCTGAGATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSGLGRG*PPEIRS
Trigger: GCTCCTGATCTCAGGAGGGCAGCCCCTCCCCAGGCC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGCCCCAGCCTCTCGGTaGCCTCCAGGTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSAPASR*PPGQHP
Trigger: AGGATGCTGACCTGGAGGCCACCGAGAGGCTGGGGC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCGCCCCAGCCTCTCGGTaGCCTCCAGGTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPAPASR*PPGQHP
Trigger: AGGATGCTGACCTGGAGGCCACCGAGAGGCTGGGGC...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGCTGCTCACCCTCCGCTaGCCCTCCCTGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMLLTLR*PSLAAA
Trigger: AGCTGCAGCCAGGGAGGGGCAGCGGAGGGTGAGCAG...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCCAGCCTCTCGGTaGCCTCCAGGTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPAPASR*PPGQHP
Trigger: AGGATGCTGACCTGGAGGCCACCGAGAGGCTGGGGC...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAPLPCL*LGHPAW
Trigger: CCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGG...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACTGGGTTGGAACCCCCTaGCCCAGGGGGCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHWVGTP*PRGQFF
Trigger: GAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCA...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTGGGTTGGAACCCCCTaGCCCAGGGGGCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPWVGTP*PRGQFF
Trigger: GAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTCTGGCTGTCTCCGGTaGGAGGGATGGACGACACTG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPSGCLR*EGWTTL
Trigger: CAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTGGATGTTCCAGGCTaGAGGGGCAGCAGCTACCCA +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSLDVPG*RGSSYP
Trigger: TGGGTAGCTGCTGCCCCTTCAGCCTGGAACATCCAG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPARSFSS*WSGIRG
Trigger: GCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCG...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTGCCTCTGTCCTCTaGTCCCCAGTGACCATGGCC +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPSASVL*SPVTMA
Trigger: GGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACT...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSCPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCAACCTCTCTACACCTaGTCTGCCTCGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHQPLYT*SASEPW
Trigger: CCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACAAACTGGCTCAGCCCTaGTGGCTGGCACGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHKLAQP*WLARGH
Trigger: ATGGCCTCGTGCCAGCCAGCAGGGCTGAGCCAGTTT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGGCCTGGGGAGGGGCTaGCCTCCTGAGATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPGLGRG*PPEIRS
Trigger: GCTCCTGATCTCAGGAGGGCAGCCCCTCCCCAGGCC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCATCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPSGCVD*GKARAG
Trigger: TCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGA...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCATGTCCGAGTCCGTCTaGCTGTCTCCGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPMSESV*LSPVRG
Trigger: CCCTCTCACCGGAGACAGCCAGACGGACTCGGACAT...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCATGTCCGAGTCCGTCTaGCTGTCTCCGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSMSESV*LSPVRG
Trigger: CCCTCTCACCGGAGACAGCCAGACGGACTCGGACAT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTCTCAGCAGAGCCCCTaGGAGCTGCCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPSQQSP*ELPTVL
Trigger: GAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTTCAAGAACCTCCTTaGGGGCTGCCCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSLQEPP*GLPTFP
Trigger: AGGGAAGGTGGGCAGCCCTCAAGGAGGTTCTTGAAG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQRSFSS*WSGIRG
Trigger: GCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCG...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCGTGGGGTGCTGGTGCTaGTCTGTTTCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPVGCWC*SVSGCV
Trigger: CACACAGCCAGAAACAGAGCAGCACCAGCACCCCAC...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMLALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCTCTGCTTCTGTGAGTaGCTCTGTCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPLCFCE*LCPLLP
Trigger: GGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQCPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCTGCTCACCCTCCGCTaGCCCTCCCTGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSLLTLR*PSLAAA
Trigger: AGCTGCAGCCAGGGAGGGGCAGCGGAGGGTGAGCAG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGAGGCGTGAGCCACCATaGCTGGCTTGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQRREPP*LACPSP
Trigger: AGGAGAGGGACAAGCCAGGCATGGTGGCTCACGCCT...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSSFSSC*SGIRGT
Trigger: CGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCT...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTTACCTGCAGGTTGGTaGCCTCCTCTGCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPALPAGW*PPLPTR
Trigger: TCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAA...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCACTGTTTCTGGCTGTGTaGACTGGGGCAAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPLFLAV*TGARRG
Trigger: CCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAG...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCGATGCTGTCTTCCAGTaGGGTGCTGGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPDAVFQ*GAGAAL
Trigger: CAGAGCAGCACCAGCACCCCACTGGAAGACAGCATC...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACATGTCCGAGTCCGTCTaGCTGTCTCCGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDMSESV*LSPVRG
Trigger: CCCTCTCACCGGAGACAGCCAGACGGACTCGGACAT...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCACATGGAGAGGGCCCATaGAGACAAGACCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPHGEGP*RQDPQA
Trigger: TGCCTGGGGGTCTTGTCTCCATGGGCCCTCTCCATG...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTGCCCACCTTCCCTTaGATCTGTCATGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSLPTFP*ICHGEG
Trigger: GCCCTCTCCATGACAGATCCAAGGGAAGGTGGGCAG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAACAACATCCCACACCTaGGGCCAGAAGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPTTSHT*GQKGRG
Trigger: ACCCCTCCCCTTCTGGCCCCAGGTGTGGGATGTTGT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCCTTGGCTTTGTCCATaGGCAGCTGCAAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAPWLCP*AAASAR
Trigger: TCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGG...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCTTTGCAACTCGCTCTaGACCAGCCAGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPLCNSL*TSQVNQ
Trigger: CTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTTCAAGAACCTCCTTaGGGGCTGCCCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQLQEPP*GLPTFP
Trigger: AGGGAAGGTGGGCAGCCCTCAAGGAGGTTCTTGAAG...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAAGGCTGAGTATGGCTTaGGCCCAGGAGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPRLSMA*AQELEA
Trigger: AGCCTCCAACTCCTGGGCTCAAGCCATACTCAGCCT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCAGCCTCCCGAGTAGCTaGGACTACAGGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCSLPSS*DYRRLL
Trigger: TAGCAAGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCTGCTTGCTCTTTGCTaGGTTCCCTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPLLALC*VPSQCG
Trigger: CCCACACTGAGAGGGAACTCAGCAAAGAGCAAGCAG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGTTGGTGGCCTCCTCTaGCCACCAGACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSVGGLL*PPDFKL
Trigger: GAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAAC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGTGGGGTGCTGGTGCTaGTCTGTTTCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCVGCWC*SVSGCV
Trigger: CACACAGCCAGAAACAGAGCAGCACCAGCACCCCAC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLLALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCAGTGCCTCTGTCCTCTaGTCCCCAGTGACCATGGCC +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEASASVL*SPVTMA
Trigger: GGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACT...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTGCATTCCACTGCCTTaGCTGTGGCTGGGACATCCT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSCIPLP*LWLGHP
Trigger: AGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTGCATTCCACTGCCTTaGCTGTGGCTGGGACATCCT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSCIPLP*LWLGHP
Trigger: AGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCA...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGGCCTTCAGGATGCCCTaGATTCCACTGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQAFRMP*IPLPCL
Trigger: CAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGC...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCAACCTCCTTGAGGGCTaGCCACCTTCCCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSNLLEG*PPSLGS
Trigger: AGATCCAAGGGAAGGTGGGCAGCCCTCAAGGAGGTT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCAGCTTCATTTCCAGGTaGCACTCCTGCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSSFISR*HSCSPS
Trigger: GGAGGGTGAGCAGGAGTGGCACCTGGAAATGAAGCT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGACTGGGCTCAGGTCTaGTCTCTGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCDWAQV*SLDVPG
Trigger: GCCTGGAACATCCAGAGAGCAGACCTGAGCCCAGTC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCAGGAGGCCCTTCCAGTaGCACCCGCTGCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIRRPFQ*HPLHPS
Trigger: TGAGGGGTGCAGCGGGTGGCACTGGAAGGGCCTCCT...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394362.5
CDS-3UTR CCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCSFSSC*SGIRGT
Trigger: CGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCT...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMSGCVD*GKARAG
Trigger: TCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGA...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGTGCTGCTCTGTTTCTaGCTGTGTGGACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAVLLCF*LCGLGQ
Trigger: TTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCAC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTTCCAGTGGGGTGCTaGTGCTGCTCTGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDLPVGC*CCSVSG
Trigger: GCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCACGACACTGGCCTCTTaGGGATGCTGTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSTTLAS*GCCLPV
Trigger: CACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTGCCTTGCCTGTGGCTaGGACATCCTGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEACLACG*DILPGP
Trigger: AGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMPLPCL*LGHPAW
Trigger: CCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGG...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCCCTTGGATCTGTCATaGAGAGGGCCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAPLDLS*RGPMET
Trigger: TGTCTCCATGGGCCCTCTCCATGACAGATCCAAGGG...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTGGGTTGGAACCCCCTaGCCCAGGGGGCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLWVGTP*PRGQFF
Trigger: GAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCTCTGGCAGGGTATGTaGCTCATGCCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHLWQGM*LMPAIP
Trigger: TGGGATTGCAGGCATGAGCCACATACCCTGCCAGAG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGCAGCCTTAACCTCCTaGGTTCAAGGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSAALTS*VQGSSH
Trigger: GTGGGAGGATCCTTGAACCCAGGAGGTTAAGGCTGC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTTCTGCCTCGGAGCCCTaGCAGTCCCTGGACACGTGT +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFSASEP*QSLDTC
Trigger: ACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGA...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCACAGCAGAGAGACTCTaGCCAGACAGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLTAERL*PDRWPQ
Trigger: CTGGGGCCACCTGTCTGGTCAGAGTCTCTCTGCTGT...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCGAGGGGCTGCCCTCCTaGGATCAGGAGCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLEGLPS*DQELSE
Trigger: TTCACTCAGCTCCTGATCTCAGGAGGGCAGCCCCTC...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGAGGGGCTGCCCTCCTaGGATCAGGAGCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPEGLPS*DQELSE
Trigger: TTCACTCAGCTCCTGATCTCAGGAGGGCAGCCCCTC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMRSFSS*WSGIRG
Trigger: GCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCG...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGCTGGAGAATTTACCTaGAGGTTGGTGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSAGEFT*RLVASS
Trigger: AGAGGAGGCCACCAACCTGCAGGTAAATTCTCCAGC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCCAGTGGGGTGCTGGTaGTGCTCTGTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAPVGCW*CSVSGC
Trigger: ACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGG...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACTGTCTTCCAGTGGGGTaGTGGTGCTGCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHCLPVG*WCCSVS
Trigger: AGAAACAGAGCAGCACCAGCACCCCACTGGAAGACA...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFILALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGGTACCATTGTAACCTaGCAGGACACTCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSGTIVT*QDTPSN
Trigger: GTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTGTGGCTGGGACATCCTaGCTGGACCTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFVAGTS*LDLSWP
Trigger: TGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCAC...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACGATTGGCCTTCAGGATaGCCTGCATTCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHDWPSG*PAFHCL
Trigger: AAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATC...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACAACCTCCTTGAGGGCTaGCCACCTTCCCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDNLLEG*PPSLGS
Trigger: AGATCCAAGGGAAGGTGGGCAGCCCTCAAGGAGGTT...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACCTGCCCCTCCCTGGCTaGAGCTGGGTTGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHLPLPG*SWVGTP
Trigger: GGGGGTTCCAACCCAGCTGCAGCCAGGGAGGGGCAG...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGGCCCCTTGGCCAGTTaGTGCACACACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSGPLAS*CTHFAY
Trigger: ATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTCCCCCTTCCTGGGCTaGAGCCTGAAAACTCACTGC +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMSPFLG*SLKTHC
Trigger: GCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTAGGCGTGAGCCACCATaGCTGGCTTGTCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGRREPP*LACPSP
Trigger: AGGAGAGGGACAAGCCAGGCATGGTGGCTCACGCCT...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCACGATCTCAGCTCACTaGAAACTCTGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSTISAH*KLCLQG
Trigger: ACCCTGGAGGCAGAGTTTGCAGTGAGCTGAGATCGT...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACGTGATCACAGCTCACTaGAGCCTTAACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHVITAH*SLNLLG
Trigger: ACCCAGGAGGTTAAGGCTGCAGTGAGCTGTGATCAC...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTCTCTCTTTGCACCTTaGCGGGTTCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPSLFAP*RVLTLP
Trigger: TGGGAGTGTGAGAACCCGGCAAGGTGCAAAGAGAGA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCCCTGCTTCTCTCTTTaGACCTTGCCGGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDPCFSL*TLPGSH
Trigger: GTGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGG...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCTGCTTCTCTCTTTaGACCTTGCCGGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQPCFSL*TLPGSH
Trigger: GTGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGG...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTAAACTGGCTCAGCCCTaGTGGCTGGCACGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGKLAQP*WLARGH
Trigger: ATGGCCTCGTGCCAGCCAGCAGGGCTGAGCCAGTTT...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCCCACAAAACCAGCCCTaGCTCCAAGAGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLPQNQP*LQEAHS
Trigger: GCTGTGGGCCTCTTGGAGCCAGGGCTGGTTTTGTGG...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR CCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCCTGTTTCTGGCTGTGTaGACTGGGGCAAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLFLAV*TGARRG
Trigger: CCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAG...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCGATGCTGTCTTCCAGTaGGGTGCTGGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEADAVFQ*GAGAAL
Trigger: CAGAGCAGCACCAGCACCCCACTGGAAGACAGCATC...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTTGCCTTGCCTGTGGCTaGGACATCCTGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFCLACG*DILPGP
Trigger: AGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCA...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGTGGACCAGAGATGCTaGCCCCTGTCCCGATGGGAT +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPVDQRC*PLSRWD
Trigger: ATCCCATCGGGACAGGGGCCAGCATCTCTGGTCCAC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCTCAGCCCTGCTGGCTaGCACGAGGCCATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLLSPAG*HEAMEN
Trigger: GTTTTCCATGGCCTCGTGCCAGCCAGCAGGGCTGAG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCCTCAGCCCTGCTGGCTaGCACGAGGCCATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPLSPAG*HEAMEN
Trigger: GTTTTCCATGGCCTCGTGCCAGCCAGCAGGGCTGAG...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGGGAAGAGTACCAGCTaGCATGCTGCTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSGKSTS*HAACSL
Trigger: CAAAGAGCAAGCAGCATGCCAGCTGGTACTCTTCCC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGACAACATCCCACACCTaGGGCCAGAAGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLTTSHT*GQKGRG
Trigger: ACCCCTCCCCTTCTGGCCCCAGGTGTGGGATGTTGT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 72 bp AGGATTGGCCTTCAGGATGCCCTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: RIGLQDALHSTA*PVAGTSCLDLS
Trigger: TGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
3UTR CAA 72 bp TTTGCACCTTGCCGGGTTCTCACACTCCCACCCACCTaGATAGTGAGTCCAAGCCCATCCTACCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: FAPCRVLTLPPT*IVSPSPSYPTP
Trigger: GGGGGTGGGGTAGGATGGGCTTGGACTCACTATCAAGGTGGGTGGGAGTGTGAGAACCCGGCAAGGTGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTCTGGCTGTCTCCGGTaGGAGGGATGGACGACACTG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFISGCLR*EGWTTL
Trigger: CAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPTSLQQ*AEAFTL
Trigger: CAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCTTCAAGAACCTCCTTaGGGGCTGCCCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGLQEPP*GLPTFP
Trigger: AGGGAAGGTGGGCAGCCCTCAAGGAGGTTCTTGAAG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCCAGGAGTTGGAGGCTaGCTAGTGAGGTATGGTCGC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGPGVGG*LVRYGR
Trigger: GCGACCATACCTCACTAGTCAGCCTCCAACTCCTGG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCTGGATGTTCCAGGCTaGAGGGGCAGCAGCTACCCA +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSLDVPG*RGSSYP
Trigger: TGGGTAGCTGCTGCCCCTTCAGCCTGGAACATCCAG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTCCTGGGCTGCAGCCTaGAAACTCACTGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLSWAAA*KLTAGS
Trigger: ACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCTTGGTCTCAAACTCCTaGCCTCGTGATCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPLVSNS*PRDPPA
Trigger: GGCTGGCGGATCACGAGGTCAGGAGTTTGAGACCAA...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATAGCCTCCCGAGTAGCTaGGACTACAGGCGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADSLPSS*DYRRLL
Trigger: TAGCAAGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSRSFSS*WSGIRG
Trigger: GCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGATGAGCAGCTGCAAGTaGTCGATCTCCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQMSSCK*SISTFR
Trigger: CCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCAT...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPASWDHS*WESDVW
Trigger: CCAGACATCTGACTCCCAGCATGAATGGTCCCAACT...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHSWDHS*WESDVW
Trigger: CCAGACATCTGACTCCCAGCATGAATGGTCCCAACT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCATCGAATCTGCCAGTaGCTTGATCTTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSHRICQ*LDLGLP
Trigger: GGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCATCGAATCTGCCAGTaGCTTGATCTTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHHRICQ*LDLGLP
Trigger: GGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCCTCTGCTTCTGTGAGTaGCTCTGTCCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPLCFCE*LCPLLP
Trigger: GGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAG...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCAGCTGAAGGAGCTCTaGTTCTGTGAGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQQLKEL*FCECLC
Trigger: ACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCTG...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCC +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPPLFSG*YDVLRP
Trigger: GGGTCTAAGGACATCATAGCACCCAGAGAACAGTGG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTCCAGGTGCCACTCCTaGTCACCCTCCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATSRCHS*SPSAAP
Trigger: AGGGGCAGCGGAGGGTGAGCAGGAGTGGCACCTGGA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCCCTTGGCCAGTTGCTaGACACACTTTGCATATGCT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHPLASC*THFAYA
Trigger: AGCATATGCAAAGTGTGTGCAGCAACTGGCCAAGGG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTCTGGGAAGGTGCACTaGTGTCAAGCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSSGKVH*CQACVH
Trigger: ATGGACACATGCTTGACAGCAGTGCACCTTCCCAGA...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTTACCTGCAGGTTGGTaGCCTCCTCTGCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLLPAGW*PPLPTR
Trigger: TCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTTACCTGCAGGTTGGTaGCCTCCTCTGCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLPAGW*PPLPTR
Trigger: TCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCTGTTTCTGGCTGTGTaGACTGGGGCAAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFILFLAV*TGARRG
Trigger: CCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCTTCCAGTGGGGTGCTaGTGCTGCTCTGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLPVGC*CCSVSG
Trigger: GCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGCCCCAGCCTCTCGGTaGCCTCCAGGTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATAPASR*PPGQHP
Trigger: AGGATGCTGACCTGGAGGCCACCGAGAGGCTGGGGC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQCLDLS*PFLGFQ
Trigger: TTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCA...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCATGGAGAGGGCCCATaGAGACAAGACCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSHGEGP*RQDPQA
Trigger: TGCCTGGGGGTCTTGTCTCCATGGGCCCTCTCCATG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGCCCTTGGATCTGTCATaGAGAGGGCCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMPLDLS*RGPMET
Trigger: TGTCTCCATGGGCCCTCTCCATGACAGATCCAAGGG...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCTGCCCACCTTCCCTTaGATCTGTCATGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLPTFP*ICHGEG
Trigger: GCCCTCTCCATGACAGATCCAAGGGAAGGTGGGCAG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGACACCAGGAGCAGTaGACCAGCACTTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPRHQEQ*TSTFIQ
Trigger: CTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGTCT...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCCTGAGAAACACATCTaGGTTCTGGCTCGTCTACTC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHPEKHI*VLARLL
Trigger: GAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAGG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCACTTTGCATATGCTCTaGACACCAGTGGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPATLHML*TPVAPD
Trigger: ATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGT...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCCCAAGAGAGATCACTaGAGCAAGAGGCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPPKRDH*SKRQAQ
Trigger: TTGAGCTTGCCTCTTGCTCCAGTGATCTCTCTTGGG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCTCCAGGCTGTAGACTaGGCTCAGGTCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLQAVD*AQVCSL
Trigger: CAGAGAGCAGACCTGAGCCCAGTCTACAGCCTGGAG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGGTATATGCCGCTGGGTaGTTTCTTCCTTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQVYAAG*FLPSGD
Trigger: GTCACCTGAAGGAAGAAATCACCCAGCGGCATATAC...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCCTTGGCTTTGTCCATaGGCAGCTGCAAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADPWLCP*AAASAR
Trigger: TCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCCTTGGCTTTGTCCATaGGCAGCTGCAAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGPWLCP*AAASAR
Trigger: TCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMTSLQQ*AEAFTL
Trigger: CAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCTCTGCAATGACCCTTaGCCTCTCTCAGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLLCNDP*PLSGPG
Trigger: GCCCGGGCCTGAGAGAGGTCAAGGGTCATTGCAGAG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR TCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTGGCTGTTGGAAACATaGACTCTTCCCAACACAGTG +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSWLLET*TLPNTV
Trigger: CACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCACTTTTCGCAAGGTaGGGAGGAGCTTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSPLFAR*GGACIQ
Trigger: TTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGAGAAGAAAAGGGAACTaGGACCCACATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMRRKGN*DPHEAW
Trigger: CCAGGCCTCATGTGGGTCTCAGTTCCCTTTTCTTCT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGCTACTTGCTGTATATaGCGCTGGGTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSATCCI*RWVISS
Trigger: GGAAGAAATCACCCAGCGGCATATACAGCAAGTAGC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCACAGACATCGAATCTaGCAGTGCCTTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPHRHRI*QCLDLG
Trigger: TCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCGTGGGGTGCTGGTGCTaGTCTGTTTCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSVGCWC*SVSGCV
Trigger: CACACAGCCAGAAACAGAGCAGCACCAGCACCCCAC...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTGGCCTTGCCTGGCCCTaGCAGCAGCTCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVGLAWP*QQLQQP
Trigger: TGGTTGCTGGAGCTGCTGGCAGGGCCAGGCAAGGCC...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGGAATGTGCGAACGGTaGTTTTCTGAAAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAGMCER*FSERAM
Trigger: CATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGATGTCCTTAGACCCTaGAGGGCAGATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIDVLRP*RADGSL
Trigger: CAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCCAAGGTACCCACACTaGCCTCTCTCAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFPRYPH*PLSSSQ
Trigger: CTGAGAGCTTGAGAGAGGGCAGTGTGGGTACCTTGG...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCAGCTTCATTTCCAGGTaGCACTCCTGCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPSFISR*HSCSPS
Trigger: GGAGGGTGAGCAGGAGTGGCACCTGGAAATGAAGCT...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCACTATATTACCACTCTaGTCCCCTCCAGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSTILPL*SPPGSS
Trigger: TGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTTGCTGCACACACTTTaGATATGCTCTGGACACCAG +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPLLHTL*ICSGHQ
Trigger: CTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAAAGCTCCACGTCCTTTaGCTCTTCCCATCACCCAAT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPKLHVL*LFPSPN
Trigger: ATTGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATCTCTACACCTGCTCTaGCTCGGAGCCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPSLHLL*LGALAV
Trigger: GACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGAGCTGGCATGCTGCTTaGTCTTTGCTGAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMSWHAA*SLLSSL
Trigger: GAGGGAACTCAGCAAAGAGCAAGCAGCATGCCAGCT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACTACCAGCTGGCATGCTaGTTGCTCTTTGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDYQLAC*LLFAEF
Trigger: GAACTCAGCAAAGAGCAAGCAGCATGCCAGCTGGTA...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCA +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSVTLSA*SLLKIS
Trigger: TGAAATCTTCAAGAGGGACCACGCTGACAGCGTTAC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTGCTGTATATGCCGCTaGGTGATTTCTTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSCCICR*VISSFR
Trigger: CCTGAAGGAAGAAATCACCCAGCGGCATATACAGCA...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCAATTTACCTGCAGGTTaGTGGCCTCCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFNLPAG*WPPLPT
Trigger: GGTGGGCAGAGGAGGCCACCAACCTGCAGGTAAATT...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHSGCVD*GKARAG
Trigger: TCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGA...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTGCTGCTCTGTTTCTaGCTGTGTGGACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADVLLCF*LCGLGQ
Trigger: TTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCAC...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATACGACACTGGCCTCTTaGGGATGCTGTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADTTLAS*GCCLPV
Trigger: CACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCTGCCCCTAGCACTCTaGCCTTGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVLPLAL*PCLALP
Trigger: TGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACATGGTGAAAATGCAGTaGGAACGGGTTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHMVKMQ*ERVEAW
Trigger: CCAAGCTTCAACCCGTTCCCACTGCATTTTCACCAT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACGCCTCTGTTAGAAGATaGCCCCCTACTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDASVRR*PPTPVF
Trigger: AAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGC...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCTGGGACATCCTGCCTaGACCTGTCATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGLGHPA*TCHGHF
Trigger: GAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCGTGAAAGATGTGGTCTaGGAGATCAGGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPVKDVV*EIRIGL
Trigger: AAGGCCAATCCTGATCTCCCAGACCACATCTTTCAC...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGTGGACCAGAGATGCTaGCCCCTGTCCCGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPVDQRC*PLSRWD
Trigger: ATCCCATCGGGACAGGGGCCAGCATCTCTGGTCCAC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGTCCATATCAAAGGCTaGGCTTCCATTAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAVHIKG*ASIRGC
Trigger: ACATCCCCTAATGGAAGCCCAGCCTTTGATATGGAC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACC +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPIQASA*IRFANT
Trigger: GGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAAT...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACCATGGCTGTAGGTGGTaGTCCTGCTTTTCCATATAC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHHGCRW*SCFSIY
Trigger: GTATATGGAAAAGCAGGACCACCACCTACAGCCATG...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCAGCCTTAACCTCCTaGGTTCAAGGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADAALTS*VQGSSH
Trigger: GTGGGAGGATCCTTGAACCCAGGAGGTTAAGGCTGC...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTTCTTCCTCCAGTTGTaGTCGCAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLFFLQL*SQLLLL
Trigger: CAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTTCTTCCTCCAGTTGTaGTCGCAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMFFLQL*SQLLLL
Trigger: CAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAA...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPARNGFV*SSEFTA
Trigger: AGCAGTGAATTCACTCGATCACACGAAGCCATTTCT...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHRNGFV*SSEFTA
Trigger: AGCAGTGAATTCACTCGATCACACGAAGCCATTTCT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCGCAGTGGGAACGGGTTaGAGCTTGGTTCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLAVGTG*SLVHRS
Trigger: ACTCCTATGAACCAAGCTTCAACCCGTTCCCACTGC...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGGCTCTGGGACTGTCTaGATTCACGTCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGGSGTV*IHVYPC
Trigger: GCATGGATAGACGTGAATTCAGACAGTCCCAGAGCC...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCAGAGTGACACCAGCCTaGGAAACACATCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEARVTPA*ETHLGS
Trigger: AGAACCCAGATGTGTTTCTCAGGCTGGTGTCACTCT...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCATTTGGATCCAGGAGATaGTGTCTCAGTGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LALPAAPATTGRMLWSAPFGSRR*CLSGRS
Trigger: AGATCTCCCACTGAGACATCATCTCCTGGATCCAAA...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATATTTGCAGAGGCCAGTaGACTCTGGGAAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADICRGQ*TLGRCT
Trigger: AGTGCACCTTCCCAGAGTTCACTGGCCTCTGCAAAT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCATCCGTGGCTCCACTaGTCCCAGGTGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLHPWLH*SQVDCW
Trigger: CCAGCAATCCACCTGGGATCAGTGGAGCCACGGATG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTTACTGGAAACAATTTaGCTCCTTTGGGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSLLETI*LLWGWL
Trigger: AAGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCCCTCTCAGTGTGGGTaGAACTGGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHPSQCG*NWLSPA
Trigger: AGCAGGGCTGAGCCAGTTTCACCCACACTGAGAGGG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCCTGAGATCAGGAGCTaGGTGAATGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFPEIRS*VNGEGR
Trigger: TCTTCCCTCTCCATTCACTCAGCTCCTGATCTCAGG...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTAGAAGAAAAGGGAACTaGGACCCACATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGRRKGN*DPHEAW
Trigger: CCAGGCCTCATGTGGGTCTCAGTTCCCTTTTCTTCT...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGCTACTTGCTGTATATaGCGCTGGGTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCATCCI*RWVISS
Trigger: GGAAGAAATCACCCAGCGGCATATACAGCAAGTAGC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCATGAGCAGCTGCAAGTaGTCGATCTCCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPMSSCK*SISTFR
Trigger: CCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCAT...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTATGAGCAGCTGCAAGTaGTCGATCTCCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFMSSCK*SISTFR
Trigger: CCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCAT...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLSMSS*KCSIST
Trigger: GGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGLSMSS*KCSIST
Trigger: GGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLLSMSS*KCSIST
Trigger: GGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCATCAAAGTCACTAGTTaGTCCCAGCAGCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAIKVTS*SQQPIV
Trigger: AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGAT...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGTTCATAGGAGTCTCTaGAATCATTCGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSVHRSL*NHSVGV
Trigger: GACACCAACCGAATGATTGCAGAGACTCCTATGAAC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATTGCCCTGCATTCCACTaGCTTGCCTGTGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHCPAFH*LACGWD
Trigger: GTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCA...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTACTGCCCCTCCCTGGCTaGAGCTGGGTTGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVLPLPG*SWVGTP
Trigger: GGGGGTTCCAACCCAGCTGCAGCCAGGGAGGGGCAG...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCTGCTCACCCTCCGCTaGCCCTCCCTGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKLLTLR*PSLAAA
Trigger: AGCTGCAGCCAGGGAGGGGCAGCGGAGGGTGAGCAG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCAAGAATACTGCTGCTaGTACATAGGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGQEYCC*YIGDWG
Trigger: GCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACCCCGCATGGGGCCATaGCACACATCTCTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPPRMGP*HTSLSV
Trigger: TACTGACAGAGATGTGTGGCATGGCCCCATGCGGGG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCACACACTTTGCATATaGTCTGGACACCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFHTLCI*SGHQWP
Trigger: GGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTG...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGGGTTCCAATTTCTGTaGCAGTCTGCTATTGCTACA +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSGFQFL*QSAIAT
Trigger: TGTAGCAATAGCAGACTGGCACAGAAATTGGAACCC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACTCATCCCTGGGACTCTaGCTTGCAAATTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDSSLGL*LANLSH
Trigger: GTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGA...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTATTCCTTGGGAGATaGATTCAGGGCTACACTCAG +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDLFLGR*IQGYTQ
Trigger: CTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAG...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTTTCTCCCAGGGCCTTaGCTTCAGAAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAFLPGP*LQKISV
Trigger: AACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAA...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCAGGGCAGGATTTTCCTaGCATTCACATCACAGACAT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPARAGFS*HSHHRH
Trigger: ATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCT...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGTGCTGCTCTGTTTCTaGCTGTGTGGACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIVLLCF*LCGLGQ
Trigger: TTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCAC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCACGACACTGGCCTCTTaGGGATGCTGTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFITTLAS*GCCLPV
Trigger: CACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGT...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCACGACACTGGCCTCTTaGGGATGCTGTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSTTLAS*GCCLPV
Trigger: CACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGT...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADCLDLS*PFLGFQ
Trigger: TTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCTGGGACATCCTGCCTaGACCTGTCATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFILGHPA*TCHGHF
Trigger: GAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTCTCAGCAGAGCCCCTaGGAGCTGCCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATSQQSP*ELPTVL
Trigger: GAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCATGGAGAGGGCCCATaGAGACAAGACCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATHGEGP*RQDPQA
Trigger: TGCCTGGGGGTCTTGTCTCCATGGGCCCTCTCCATG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTCCGCTGCCCCTCCCTaGCTGCAGCTGGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FSTSNIHSQPLYTCSASESAAPP*LQLGWN
Trigger: GTTCCAACCCAGCTGCAGCCAGGGAGGGGCAGCGGA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCTACATGTGTGTTCCATaGACTCTTGGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCYMCVP*TLGEAS
Trigger: AGAAGCCTCCCCAAGAGTCCATGGAACACACATGTA...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGTGCTACATAGGGGACTaGGGCAAATGCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLCYIGD*GKCHAI
Trigger: GATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCA...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTGCTACATAGGGGACTaGGGCAAATGCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGCYIGD*GKCHAI
Trigger: GATGGCATGGCATTTGCCCCAGTCCCCTATGTAGCA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACAATGTTGAAAGACTCTaGCAGGGTATGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHNVERL*QGMWLM
Trigger: CATGAGCCACATACCCTGCCAGAGTCTTTCAACATT...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACTTTCCACAGGCTGCATaGAGAGACAATGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDFPQAA*RDNELC
Trigger: GCAGAGTTCATTGTCTCTCCATGCAGCCTGTGGAAA...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCCACTTTGTCCTCCCTaGATTCCCAGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFPLCPP*IPSSIS
Trigger: GGAAATGGAGCTGGGAATCCAGGGAGGACAAAGTGG...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGGGGTTTCGCCATGTTaGCCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPGVSPC*PGWSQT
Trigger: AGTTTGAGACCAACCTGGCCAACATGGCGAAACCCC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGGGGTTTCGCCATGTTaGCCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMGVSPC*PGWSQT
Trigger: AGTTTGAGACCAACCTGGCCAACATGGCGAAACCCC...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCCTGGACACGTGTTATaGAAGGAACACTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLPGHVL*KEHCLP
Trigger: GGGGAGACAGTGTTCCTTCCATAACACGTGTCCAGG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCGGGCTTTCAGGCGAGTaGACATTGTTTTATACCTTC +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCGLSGE*TLFYTF
Trigger: GAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCC...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDLRVIE*IHCWRI
Trigger: AATTCTCCAGCAGTGAATTCACTCGATCACACGAAG...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCTTGGGACACAGCAATaGGCAAGACAAACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFILGTQQ*ARQTGP
Trigger: GGGACCTGTTTGTCTTGCTCATTGCTGTGTCCCAAG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGAGAGTGACACCAGCCTaGGAAACACATCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLRVTPA*ETHLGS
Trigger: AGAACCCAGATGTGTTTCTCAGGCTGGTGTCACTCT...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATTCCTGGGCTGCAGCCTaGAAACTCACTGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHSWAAA*KLTAGS
Trigger: ACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGA...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTAAACTCCTGACCTCGTaGTCCGCCAGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATKLLTS*SASLSL
Trigger: GAGACTGAGGCTGGCGGATCACGAGGTCAGGAGTTT...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCCTCCAGGGTTCAAGTaGTTGTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLPPGFK*LSCLSL
Trigger: GAGGCTGAGGCAGGACAATCACTTGAACCCTGGAGG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCGAACTGAGACCCACATaGGGCCTGGACTATGTTAGG +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSELRPT*GLDYVR
Trigger: CCTAACATAGTCCAGGCCTCATGTGGGTCTCAGTTC...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCGACCAGGGCCTTTGCTaGAACAGATCCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCDQGLC*NRSCLT
Trigger: AGTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGGTC...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADSWDHS*WESDVW
Trigger: CCAGACATCTGACTCCCAGCATGAATGGTCCCAACT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTGTCTTCCAGTGGGGTaGTGGTGCTGCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFICLPVG*WCCSVS
Trigger: AGAAACAGAGCAGCACCAGCACCCCACTGGAAGACA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTTGCTTCCCAAACATTaGTTCTGCAGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSLLPKH*FCRMLC
Trigger: ACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACTTGCTTCCCAAACATTaGTTCTGCAGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHLLPKH*FCRMLC
Trigger: ACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAA...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACATCAAAGTCACTAGTTaGTCCCAGCAGCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: QDALHSTALPVAGTSCLDIKVTS*SQQPIV
Trigger: AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGAT...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCCACTGTTCTCTGGGTaGTATGATGTCCTTAGACCC +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADPLFSG*YDVLRP
Trigger: GGGTCTAAGGACATCATAGCACCCAGAGAACAGTGG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGCATGCCAAGAATACTaGTGCTGCTACATAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPACQEY*CCYIGD
Trigger: GTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTTGCCCAAGCTGGAGTaGAATGGCACAATTTCGGCT +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMLPKLE*NGTISA
Trigger: AGCCGAAATTGTGCCATTGCACTCCAGCTTGGGCAA...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTGGGACCATTCATGCTaGGAGTCAGATGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGWDHSC*ESDVWR
Trigger: TCTCCAGACATCTGACTCCCAGCATGAATGGTCCCA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGATGCTGTCTTCCAGTaGGGTGCTGGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATDAVFQ*GAGAAL
Trigger: CAGAGCAGCACCAGCACCCCACTGGAAGACAGCATC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCGACACTCCCAGCAACTaGTTTGGCAATGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSDTPSN*FGNVFK
Trigger: TTTGAAAACATTGCCAAACCAGTTGCTGGGAGTGTC...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CCA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACGGAGGCTTCATGTCTTaGATCCAAAAGATCATAACC +
Preference number: 4 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHGGFMS*IQKIIT
Trigger: GGTTATGATCTTTTGGATCCAAGACATGAAGCCTCC...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCGCAAATCTTCCAAACTaGAGGCTTCATGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSANLPN*RLHVLD
Trigger: ATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGC...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCCTGAGAAACACATCTaGGTTCTGGCTCGTCTACTC +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMPEKHI*VLARLL
Trigger: GAGTAGACGAGCCAGAACCCAGATGTGTTTCTCAGG...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTACATGTGTGTTCCATaGACTCTTGGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAYMCVP*TLGEAS
Trigger: AGAAGCCTCCCCAAGAGTCCATGGAACACACATGTA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTATTCAAGCCTCTGCCTaGATCAGGTTTGCCAACACC +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFIQASA*IRFANT
Trigger: GGTGTTGGCAAACCTGATCCAGGCAGAGGCTTGAAT...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCCCAAGAGAGATCACTaGAGCAAGAGGCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGPKRDH*SKRQAQ
Trigger: TTGAGCTTGCCTCTTGCTCCAGTGATCTCTCTTGGG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCCACCTGCTTCCTCCTaGTGGTTCTTTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLPPASS*WFFPLP
Trigger: AGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCCTGGACACGTGTTATaGAAGGAACACTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSPGHVL*KEHCLP
Trigger: GGGGAGACAGTGTTCCTTCCATAACACGTGTCCAGG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCAGGGCAGGATTTTCCTaGCATTCACATCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSRAGFS*HSHHFC
Trigger: ACAAAAGTGATGTGAATGCCAGGAAAATCCTGCCCT...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGGGTGTGAGCATCCTCTaGCATTATATTTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQGVSIL*HYILMV
Trigger: CACCATCAAAATATAATGTCAGAGGATGCTCACACC...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCTCCTCTGTGGTTGCCTaGTGGAGAGTCAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFSSVVA*WRVKFF
Trigger: GAAAAACTTGACTCTCCATCAGGCAACCACAGAGGA...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACCTTTGCAACTCGCTCTaGACCAGCCAGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHLCNSL*TSQVNQ
Trigger: CTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAG...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCTGGCTCGTCTACTCATaGACTGAAGGACCGTTTACT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFWLVYS*TEGPFT
Trigger: AGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCA...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCCTTACTATGTTCCATTaGACTGTGAGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLTMFH*TVRARS
Trigger: ACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAG...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCATCTTCAGGGCTCTTaGGAGTGTGTGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGHLQGS*ECVCVC
Trigger: ACATACACACACACACTCTCAAGAGCCCTGAAGATG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTTTGGATCCAGGAGATaGTGTCTCAGTGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADFGSRR*CLSGRS
Trigger: AGATCTCCCACTGAGACATCATCTCCTGGATCCAAA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCCATCCGTGGCTCCACTaGTCCCAGGTGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCHPWLH*SQVDCW
Trigger: CCAGCAATCCACCTGGGATCAGTGGAGCCACGGATG...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCCACTTTTCGCAAGGTaGGGAGGAGCTTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMPLFAR*GGACIQ
Trigger: TTGAATACAAGCTCCTCCTCACCTTGCGAAAAGTGG...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCACTGGAGAACTTCCTaGAAGAAGAAAAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAHWRTS*KKKREL
Trigger: CAGTTCCCTTTTCTTCTTTCAGGAAGTTCTCCAGTG...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTGCTACTTGCTGTATATaGCGCTGGGTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFATCCI*RWVISS
Trigger: GGAAGAAATCACCCAGCGGCATATACAGCAAGTAGC...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGTTGGTGGCCTCCTCTaGCCACCAGACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLVGGLL*PPDFKL
Trigger: GAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAAC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGTTCATAGGAGTCTCTaGAATCATTCGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMVHRSL*NHSVGV
Trigger: GACACCAACCGAATGATTGCAGAGACTCCTATGAAC...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGACAATCTTGGTCTTTaGTTTCAGAGGAGACTGTAT +
Preference number: 4 (lower is better)
Translates to: ALPAAPATTGRMLWSAPADNLGL*FQRRLY
Trigger: ATACAGTCTCCTCTGAAAGCAAAGACCAAGATTGTC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACAGAGCCCCTGGGAGCTaGCCACTGTTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNRAPGS*PLFSGC
Trigger: GCACCCAGAGAACAGTGGGCAGCTCCCAGGGGCTCT...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCCAAGGTACCCACACTaGCCTCTCTCAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHPRYPH*PLSSSQ
Trigger: CTGAGAGCTTGAGAGAGGGCAGTGTGGGTACCTTGG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCACTATATTACCACTCTaGTCCCCTCCAGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFTILPL*SPPGSS
Trigger: TGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCTCTGGGAAGGTGCACTaGTGTCAAGCATGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSSGKVH*CQACVH
Trigger: ATGGACACATGCTTGACAGCAGTGCACCTTCCCAGA...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTGGCCCATATTTTCCTaGTTCTTTGCATGCCTGATT +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQWPIFS*FFACLI
Trigger: AATCAGGCATGCAAAGAAGCAGGAAAATATGGGCCA...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCATTTCAAAAGCCTCCTaGCATCCTAATGACATTTCC +
Preference number: 4 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSISKAS*HPNDIS
Trigger: GGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAAT...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTTTCTCCCAGGGCCTTaGCTTCAGAAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMFLPGP*LQKISV
Trigger: AACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGAATTTACCTGCAGGTTaGTGGCCTCCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLNLPAG*WPPLPT
Trigger: GGTGGGCAGAGGAGGCCACCAACCTGCAGGTAAATT...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCTTCCAGTGGGGTGCTaGTGCTGCTCTGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVLPVGC*CCSVSG
Trigger: GCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATGGTGAAAATGCAGTaGGAACGGGTTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFMVKMQ*ERVEAW
Trigger: CCAAGCTTCAACCCGTTCCCACTGCATTTTCACCAT...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGAAAGATGTGGTCTaGGAGATCAGGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMVKDVV*EIRIGL
Trigger: AAGGCCAATCCTGATCTCCCAGACCACATCTTTCAC...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCCCTTGGATCTGTCATaGAGAGGGCCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLPLDLS*RGPMET
Trigger: TGTCTCCATGGGCCCTCTCCATGACAGATCCAAGGG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCAGACACCAGGAGCAGTaGACCAGCACTTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIRHQEQ*TSTFIQ
Trigger: CTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGTCT...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGAGCAAAAGGCCCCTTaGCCAGTTGCTGCACACACT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATEQKAP*PVAAHT
Trigger: AGTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATGAGCAAAAGGCCCCTTaGCCAGTTGCTGCACACACT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHEQKAP*PVAAHT
Trigger: AGTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTC...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCGTCCATATCAAAGGCTaGGCTTCCATTAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPVHIKG*ASIRGC
Trigger: ACATCCCCTAATGGAAGCCCAGCCTTTGATATGGAC...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCTCAGGTCTGCTCTCTaGATGTTCCAGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLLRSAL*MFQAEG
Trigger: CCCTTCAGCCTGGAACATCCAGAGAGCAGACCTGAG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCCTGCTTCCTCCTGGTaGTTCTTTCCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVPASSW*FFPLPW
Trigger: CCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATAGCCCTGGCAGTCCCTaGACACGTGTTATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHSPGSP*TRVMEG
Trigger: TCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCT...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATAGTTCCCTCTCAGTGTaGGTGAAACTGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHSSLSV*VKLAQP
Trigger: GGGCTGAGCCAGTTTCACCCACACTGAGAGGGAACT...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLRVIE*IHCWRI
Trigger: AATTCTCCAGCAGTGAATTCACTCGATCACACGAAG...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLRNGFV*SSEFTA
Trigger: AGCAGTGAATTCACTCGATCACACGAAGCCATTTCT...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACAATCTGCCAGTGCCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHNLPVP*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATT...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR TCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGATAGTCGCATTCTTTaGCCTTCTTCTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGDSRIL*PSSGFP
Trigger: AGGAAACCCAGAAGAAGGTCAAAGAATGCGACTATC...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATTAAGGCCAGGAATTTaGGACCATCCTGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPLRPGI*DHPEPH
Trigger: GTGTGGCTCAGGATGGTCTCAAATTCCTGGCCTTAA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCTGTGTCTCTATACAATaGCTGTTTTGGGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCCVSIQ*LFWEVS
Trigger: AGAAACCTCCCAAAACAGTCATTGTATAGAGACACA...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCCTGAGATCAGGAGCTaGGTGAATGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLPEIRS*VNGEGR
Trigger: TCTTCCCTCTCCATTCACTCAGCTCCTGATCTCAGG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCTGTGATGCTGATACCTaGCCAGGGCCTTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCCDADT*PGPLLK
Trigger: TTTCAGCAAAGGCCCTGGTCAGGTATCAGCATCACA...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 4 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIRCLHL*FILAGI
Trigger: TATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGGCATGTCGTACAGTTaGAGATCCTGGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPGMSYS*RSWFLA
Trigger: AGCAAGGAACCAGGATCTGCAACTGTACGACATGCC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCAGCTGAAGGAGCTCTaGTTCTGTGAGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHQLKEL*FCECLC
Trigger: ACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCTG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAATTCACGTCTATCCATaGCAGCCAAGTGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPIHVYP*QPSGEP
Trigger: AGGCTCTCCACTTGGCTGGCATGGATAGACGTGAAT...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAACCTCCTTGAGGGCTaGCCACCTTCCCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVNLLEG*PPSLGS
Trigger: AGATCCAAGGGAAGGTGGGCAGCCCTCAAGGAGGTT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTCCAGGTGCCACTCCTaGTCACCCTCCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCSRCHS*SPSAAP
Trigger: AGGGGCAGCGGAGGGTGAGCAGGAGTGGCACCTGGA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTTCCAGGTGCCACTCCTaGTCACCCTCCGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFSRCHS*SPSAAP
Trigger: AGGGGCAGCGGAGGGTGAGCAGGAGTGGCACCTGGA...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGCATGCCAAGAATACTaGTGCTGCTACATAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPACQEY*CCYIGD
Trigger: GTCCCCTATGTAGCAGCAGCAGTATTCTTGGCATGC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACGGCCCCTTGGCCAGTTaGTGCACACACTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHGPLAS*CTHFAY
Trigger: ATATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCC...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTTTCCATATACAGGATaGTCTCAGTGCCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAFPYTG*SQCLST
Trigger: TGTGGAAAGGCACTGAGAGCATCCTGTATATGGAAA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCGGAAATTATTCCACCTaGTTCCTCCTGGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFGNYST*FLLVVL
Trigger: AAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCC...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGACGATCTCAGCTCACTaGAAACTCTGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLTISAH*KLCLQG
Trigger: ACCCTGGAGGCAGAGTTTGCAGTGAGCTGAGATCGT...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGTGATCACAGCTCACTaGAGCCTTAACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLVITAH*SLNLLG
Trigger: ACCCAGGAGGTTAAGGCTGCAGTGAGCTGTGATCAC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACACAAGTCCCCTTTTTaGCAAGCTCCACGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPHKSPF*QAPRPL
Trigger: CAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIVTLSA*SLLKIS
Trigger: TGAAATCTTCAAGAGGGACCACGCTGACAGCGTTAC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAATTTACCTGCAGGTTaGTGGCCTCCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVNLPAG*WPPLPT
Trigger: GGTGGGCAGAGGAGGCCACCAACCTGCAGGTAAATT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCAGGGCAGGATTTTCCTaGCATTCACATCACAGACAT +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPRAGFS*HSHHRH
Trigger: ATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCT...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTACTGTTTCTGGCTGTGTaGACTGGGGCAAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVLFLAV*TGARRG
Trigger: CCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAG...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGATGCTGTCTTCCAGTaGGGTGCTGGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCDAVFQ*GAGAAL
Trigger: CAGAGCAGCACCAGCACCCCACTGGAAGACAGCATC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTGGATGGATATTTCCTaGAAATTCAATTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSWMDIS*KFNCFP
Trigger: TGGGAAGCAATTGAATTTCCAGGAAATATCCATCCA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCCTGCCCCTAGCACTCTaGCCTTGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCLPLAL*PCLALP
Trigger: TGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAG...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTGCCTGGACCTGTCATaGCCATTTCTGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLCLDLS*PFLGFQ
Trigger: TTGGAAGCCCAGAAATGGCCATGACAGGTCCAGGCA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACTGCCTTGCCTGTGGCTaGGACATCCTGCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNCLACG*DILPGP
Trigger: AGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCA...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACTCTCAGCAGAGCCCCTaGGAGCTGCCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNSQQSP*ELPTVL
Trigger: GAGAACAGTGGGCAGCTCCCAGGGGCTCTGCTGAGA...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTCCGCTGCCCCTCCCTaGCTGCAGCTGGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGSAAPP*LQLGWN
Trigger: GTTCCAACCCAGCTGCAGCCAGGGAGGGGCAGCGGA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAGGTTCACACCCCGCATaGGGCCATGCCACACATCTC +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVGSHPA*GHATHL
Trigger: GAGATGTGTGGCATGGCCCCATGCGGGGTGTGAACC...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTCCACTGATCCCAGGTaGATTGCTGGAAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGSTDPR*IAGKSF
Trigger: AAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGCAGCAGCTACCCATaGCATGTTCATCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLGSSYP*HVHPKR
Trigger: TCTCTTGGGATGAACATGCCATGGGTAGCTGCTGCC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCCATCATGGCTGTAGGTaGTGGTCCTGCTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIHHGCR*WSCFSI
Trigger: TATGGAAAAGCAGGACCACCACCTACAGCCATGATG...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGAGGTTCCAAGAATGCTaGCACTTTCTCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMRFQEC*HFLCLC
Trigger: ACAGAGACAGAGAAAGTGCCAGCATTCTTGGAACCT...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACGGGAAGAGTACCAGCTaGCATGCTGCTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHGKSTS*HAACSL
Trigger: CAAAGAGCAAGCAGCATGCCAGCTGGTACTCTTCCC...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGTGAGCATCCTCTaGCATTATATTTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADGVSIL*HYILMV
Trigger: CACCATCAAAATATAATGTCAGAGGATGCTCACACC...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATCCTCTGTGGTTGCCTaGTGGAGAGTCAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPSSVVA*WRVKFF
Trigger: GAAAAACTTGACTCTCCATCAGGCAACCACAGAGGA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCAATGTAGTGACAAGTTaGTATACTTGGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VGTPWPRGQFFKNLLEGCNVVTS*YTWPLL
Trigger: TAACAGAGGCCAAGTATATCAACTTGTCACTACATT...GCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCCAGCTTCATTCTTTATaGGTGCCACTCGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCQLHSL*VPLAVQ
Trigger: TTGCACAGCGAGTGGCACTCATAAAGAATGAAGCTG...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCCACATTCCACTGGTGTaGGCATCCTCTGACATTATA +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSHIPLV*ASSDII
Trigger: TATAATGTCAGAGGATGCTCACACCAGTGGAATGTG...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCATTTTGGCCTAGAGTaGACTCAGATACTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLHFGLE*TQILLV
Trigger: GACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACATTCCTAGGGCTACTTaGTGTATATGCCGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHIPRAT*CICRWV
Trigger: CACCCAGCGGCATATACAGCAAGTAGCCCTAGGAAT...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVLSMSS*KCSIST
Trigger: GGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGTTGGTGGCCTCCTCTaGCCACCAGACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEVGGLL*PPDFKL
Trigger: GAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAAC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCTTGCTTCCCAAACATTaGTTCTGCAGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLLPKH*FCRMLC
Trigger: ACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAA...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTTGCTTCCCAAACATTaGTTCTGCAGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLLPKH*FCRMLC
Trigger: ACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAGGAATGTGCGAACGGTaGTTTTCTGAAAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPGMCER*FSERAM
Trigger: CATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCC...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCTCCAAGGAGAGTGTTaGAATCATAGTTGTCATGCA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLQGEC*NHSCHA
Trigger: TGCATGACAACTATGATTGCAACACTCTCCTTGGAG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTTCATTCTTTATGAGTaGCACTCGCTGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMFILYE*HSLCKS
Trigger: AGATTTGCACAGCGAGTGGCACTCATAAAGAATGAA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCGACAATCTTGGTCTTTaGTTTCAGAGGAGACTGTAT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEADNLGL*FQRRLY
Trigger: ATACAGTCTCCTCTGAAAGCAAAGACCAAGATTGTC...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAGATGTCCTTAGACCCTaGAGGGCAGATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVDVLRP*RADGSL
Trigger: CAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATC...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGGAGTGGACCAGAGATaGTGGCCCCTGTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFGVDQR*WPLSRW
Trigger: CCATCGGGACAGGGGCCAGCATCTCTGGTCCACTCC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTTGTTTCCCTTCTCTTaGGGATCAATCATACCCTAT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEALFPFS*GSIIPY
Trigger: ATAGGGTATGATTGATCCGCAAGAGAAGGGAAACAA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATCCCCCTTCCTGGGCTaGAGCCTGAAAACTCACTGC +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVSPFLG*SLKTHC
Trigger: GCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGA...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTTGCCCAAGCTGGAGTaGAATGGCACAATTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLPKLE*NGTISA
Trigger: AGCCGAAATTGTGCCATTGCACTCCAGCTTGGGCAA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGAGACTACAGGCGCTTaGTACCATGCCCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCETTGA*YHAQLT
Trigger: GGTTAGCTGGGCATGGTAGCAAGCGCCTGTAGTCTC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGATCTCTACACCTGCTCTaGCTCGGAGCCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGSLHLL*LGALAV
Trigger: GACTGCCAGGGCTCCGAGGCAGAGCAGGTGTAGAGA...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACTGGGACCATTCATGCTaGGAGTCAGATGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHWDHSC*ESDVWR
Trigger: TCTCCAGACATCTGACTCCCAGCATGAATGGTCCCA...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACTGCCCCTAGCACTCTaGCCTTGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLLPLAL*PCLALP
Trigger: TGGCAGGGCCAGGCAAGGCCAGAGTGCTAGGGGCAG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCCAACCAGATGGAGTTTaGCATGTCGTACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCQPDGV*HVVQLQ
Trigger: CTGCAACTGTACGACATGCCAAACTCCATCTGGTTG...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGCCTCTGTTAGAAGATaGCCCCCTACTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATASVRR*PPTPVF
Trigger: AAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHCHGHF*ASKPEH
Trigger: GTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACA...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCCACTGCCTTGCCTGTaGCTGGGACATCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLPLPCL*LGHPAW
Trigger: CCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTATAAAATAGGGGTGTaGATTAGAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLYKIGV*IRGARW
Trigger: CCATCGAGCTCCTCTAATCCACACCCCTATTTTATA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCTATAAAATAGGGGTGTaGATTAGAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFYKIGV*IRGARW
Trigger: CCATCGAGCTCCTCTAATCCACACCCCTATTTTATA...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTCCCAGGTGGATTGCTaGAAAGTCTTTTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEASQVDC*KVFSKH
Trigger: ATGTTTTGAAAAGACTTTCCAGCAATCCACCTGGGA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTGGCAGCAGCTACCCATaGCATGTTCATCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVGSSYP*HVHPKR
Trigger: TCTCTTGGGATGAACATGCCATGGGTAGCTGCTGCC...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTGTCATATACTGTCTCTaGGTTCCAATTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGVIYCL*VPISVP
Trigger: TGGCACAGAAATTGGAACCCAGAGACAGTATATGAC...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTTCTTTCCCCTGCCTTaGGTAATTTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGFFPLP*VISSHA
Trigger: TGCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCAAGCTGGAGTGCAATaGCACAATTTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATQAGVQ*HNFGSL
Trigger: CAGTGAGCCGAAATTGTGCCATTGCACTCCAGCTTG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCAGTTCCCTCTCAGTGTaGGTGAAACTGGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCSSLSV*VKLAQP
Trigger: GGGCTGAGCCAGTTTCACCCACACTGAGAGGGAACT...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTCCTTGCTTGACAAATaGATGGTGAAAATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFISLLDK*MVKMQW
Trigger: CCACTGCATTTTCACCATTCATTTGTCAAGCAAGGA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTCTTTGCAACTCGCTCTaGACCAGCCAGGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESLCNSL*TSQVNQ
Trigger: CTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAG...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCAGCTTCATTCTTTATaGGTGCCACTCGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATQLHSL*VPLAVQ
Trigger: TTGCACAGCGAGTGGCACTCATAAAGAATGAAGCTG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCCTTGGGACACAGCAATaGGCAAGACAAACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCLGTQQ*ARQTGP
Trigger: GGGACCTGTTTGTCTTGCTCATTGCTGTGTCCCAAG...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACTGGCTCGTCTACTCATaGACTGAAGGACCGTTTACT +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHWLVYS*TEGPFT
Trigger: AGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCA...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACTGTTCCATTGAACTGTaGGGGCCAGGAGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNCSIEL*GPGVDQ
Trigger: CTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACA...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTGGCTGTTGGAAACATaGACTCTTCCCAACACAGTG +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLWLLET*TLPNTV
Trigger: CACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCCCCTCTCAGTGTGGGTaGAACTGGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCPSQCG*NWLSPA
Trigger: AGCAGGGCTGAGCCAGTTTCACCCACACTGAGAGGG...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGCTGGAGAATTTACCTaGAGGTTGGTGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCAGEFT*RLVASS
Trigger: AGAGGAGGCCACCAACCTGCAGGTAAATTCTCCAGC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVSWDHS*WESDVW
Trigger: CCAGACATCTGACTCCCAGCATGAATGGTCCCAACT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTCCTGGAAATTCAATTaGTTCCCAAACATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAFHCLACGWDILPGPVMSWKFN*FPNIAS
Trigger: AGAAGCAATGTTTGGGAAGCAATTGAATTTCCAGGA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGCAAGTGAGGGGCGCTaGCTTCATCTGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCASEGR*LHLCFI
Trigger: AATGAAGCACAGATGAAGGCAGCGCCCCTCACTTGC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACGGCATGTCGTACAGTTaGAGATCCTGGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHGMSYS*RSWFLA
Trigger: AGCAAGGAACCAGGATCTGCAACTGTACGACATGCC...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCGATGTCCTTAGACCCTaGAGGGCAGATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLDVLRP*RADGSL
Trigger: CAGGGAGCCATCTGCCCTGCAGGGTCTAAGGACATC...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAGGAGTGGACCAGAGATaGTGGCCCCTGTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVGVDQR*WPLSRW
Trigger: CCATCGGGACAGGGGCCAGCATCTCTGGTCCACTCC...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATTCATCCCTGGGACTCTaGCTTGCAAATTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHSSLGL*LANLSH
Trigger: GTGGCTTAAATTTGCAAGGCAGAGTCCCAGGGATGA...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGAGACTACAGGCGCTTaGTACCATGCCCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNETTGA*YHAQLT
Trigger: GGTTAGCTGGGCATGGTAGCAAGCGCCTGTAGTCTC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCAACCCAATACCCAACCTaGCATCATTGTCCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPTQYPT*HHCPKL
Trigger: AAGCTTAGGACAATGATGGCAGGTTGGGTATTGGGT...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACAAGTCCCCTTTTTaGCAAGCTCCACGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVHKSPF*QAPRPL
Trigger: CAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACACTGTCTCCCCCACATaGTCACATGGCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNTVSPT*SHGPNP
Trigger: GGGATTTGGGCCATGTGAGCATGTGGGGGAGACAGT...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCAACCTCTCTACACCTaGTCTGCCTCGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLQPLYT*SASEPW
Trigger: CCAGGGCTCCGAGGCAGAGCAGGTGTAGAGAGGTTG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLVTLSA*SLLKIS
Trigger: TGAAATCTTCAAGAGGGACCACGCTGACAGCGTTAC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTCCCAGCAACTGGTTTaGCAATGTTTTCAAAAACGG +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFISQQLV*QCFQKR
Trigger: CCGTTTTTGAAAACATTGCCAAACCAGTTGCTGGGA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCGGACACTGGTCATCATaGAGTTTCTATAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLGHWSS*SFYKEC
Trigger: ACATTCCTTATAGAAACTCCATGATGACCAGTGTCC...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTGTCTCTTAGGACACTaGTCATCATGGAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGCLLGH*SSWSFY
Trigger: ATAGAAACTCCATGATGACCAGTGTCCTAAGAGACA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGCCAAGGGAGAGAGCTaGCAAATCGTTAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: GDTAVQALPPGHPGQEADAKGES*QIVKNK
Trigger: TTTATTTTTAACGATTTGCCAGCTCTCTCCCTTGGC...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCGCCAAGGGAGAGAGCTaGCAAATCGTTAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFAKGES*QIVKNK
Trigger: TTTATTTTTAACGATTTGCCAGCTCTCTCCCTTGGC...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTGTCATGGCCATTTCTaGGCTTCCAAACCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVCHGHF*ASKPEH
Trigger: GTGCTCTGGTTTGGAAGCCCAGAAATGGCCATGACA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACGTGAAAGATGTGGTCTaGGAGATCAGGATTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHVKDVV*EIRIGL
Trigger: AAGGCCAATCCTGATCTCCCAGACCACATCTTTCAC...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVFSLWK*GVSAQI
Trigger: GATTTGGGCTGACACTCCCCACTTCCACAGGGAAAA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCTGCCCACCTTCCCTTaGATCTGTCATGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWLPTFP*ICHGEG
Trigger: GCCCTCTCCATGACAGATCCAAGGGAAGGTGGGCAG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTACTTTGCATATGCTCTaGACACCAGTGGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVTLHML*TPVAPD
Trigger: ATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTCACTCTAAACCTCAGTaGTTTATGACAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: DTAVQALPPGHPGQEADGHSKPQ*FMTSSI
Trigger: TATGCTGCTTGTCATAAACCACTGAGGTTTAGAGTG...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGACTCAGGGAAACCACTaGGCTCTACCTGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWTQGNH*ALPGSP
Trigger: GGGGGAACCAGGTAGAGCCCAGTGGTTTCCCTGAGT...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATTCTCTCTCTCATCCCTaGGACTCTGCCTTGCAAATT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHSLSHP*DSALQI
Trigger: AATTTGCAAGGCAGAGTCCCAGGGATGAGAGAGAGA...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGACCACCTGCTTCCTCCTaGTGGTTCTTTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGPPASS*WFFPLP
Trigger: AGGCAGGGGAAAGAACCACCAGGAGGAAGCAGGTGG...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGTGAGCCACCATGCCTaGCTTGTCCCTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGVSHHA*LVPLLR
Trigger: ACGAAGGAGAGGGACAAGCCAGGCATGGTGGCTCAC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACAGCCCTGGCAGTCCCTaGACACGTGTTATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNSPGSP*TRVMEG
Trigger: TCCTTCCATAACACGTGTCCAGGGACTGCCAGGGCT...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTATCTGCCTCGGAGCCCTaGCAGTCCCTGGACACGTGT +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVSASEP*QSLDTC
Trigger: ACACGTGTCCAGGGACTGCCAGGGCTCCGAGGCAGA...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCAGGGCAGGATTTTCCTaGCATTCACATCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSRAGFS*HSHHFC
Trigger: ACAAAAGTGATGTGAATGCCAGGAAAATCCTGCCCT...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458470.5
3UTR CAA 72 bp ATGGGGCCATGCCACACATCTCTGTCAGTAAGGCCTTaGGATCCAGGAGATGATGTCTCAGTGGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: MGPCHTSLSVRP*DPGDDVSVGDL
Trigger: TAGATCTCCCACTGAGACATCATCTCCTGGATCCAAAGGCCTTACTGACAGAGATGTGTGGCATGGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLLRVIE*IHCWRI
Trigger: AATTCTCCAGCAGTGAATTCACTCGATCACACGAAG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHRNGFV*SSEFTA
Trigger: AGCAGTGAATTCACTCGATCACACGAAGCCATTTCT...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVTSLQQ*AEAFTL
Trigger: CAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGT...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCCTGTTCAAAAATGTATaGCAGTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFLFKNV*QCPWDN
Trigger: ATTATCCCAAGGACACTGTCATACATTTTTGAACAG...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTGCAGTGGGAACGGGTTaGAGCTTGGTTCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESAVGTG*SLVHRS
Trigger: ACTCCTATGAACCAAGCTTCAACCCGTTCCCACTGC...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCTCCTTGCTTGACAAATaGATGGTGAAAATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCSLLDK*MVKMQW
Trigger: CCACTGCATTTTCACCATTCATTTGTCAAGCAAGGA...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTGCAAATCTGCAGGTTaGTATAGACTCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLCKSAG*YRLIKI
Trigger: AATCTTGATGAGTCTATATCAACCTGCAGATTTGCA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCTGCAAATCTGCAGGTTaGTATAGACTCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPCKSAG*YRLIKI
Trigger: AATCTTGATGAGTCTATATCAACCTGCAGATTTGCA...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGGCTCTGGGACTGTCTaGATTCACGTCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNGSGTV*IHVYPC
Trigger: GCATGGATAGACGTGAATTCAGACAGTCCCAGAGCC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCACATTCCACTGGTGTaGGCATCCTCTGACATTATA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLHIPLV*ASSDII
Trigger: TATAATGTCAGAGGATGCTCACACCAGTGGAATGTG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCAGGCTGAGTATGGCTTaGGCCCAGGAGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLRLSMA*AQELEA
Trigger: AGCCTCCAACTCCTGGGCTCAAGCCATACTCAGCCT...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCAAACTCCTGACCTCGTaGTCCGCCAGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCKLLTS*SASLSL
Trigger: GAGACTGAGGCTGGCGGATCACGAGGTCAGGAGTTT...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCCTCCAGGGTTCAAGTaGTTGTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLPPGFK*LSCLSL
Trigger: GAGGCTGAGGCAGGACAATCACTTGAACCCTGGAGG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCACTGGAGAACTTCCTaGAAGAAGAAAAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATHWRTS*KKKREL
Trigger: CAGTTCCCTTTTCTTCTTTCAGGAAGTTCTCCAGTG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGATGAGCAGCTGCAAGTaGTCGATCTCCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKMSSCK*SISTFR
Trigger: CCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCAT...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAGCTGGAGAATTTACCTaGAGGTTGGTGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVAGEFT*RLVASS
Trigger: AGAGGAGGCCACCAACCTGCAGGTAAATTCTCCAGC...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTCCTGGAAATTCAATTaGTTCCCAAACATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSVASRSASLKKHSPLSWKFN*FPNIAS
Trigger: AGAAGCAATGTTTGGGAAGCAATTGAATTTCCAGGA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTCCTGGAAATTCAATTaGTTCCCAAACATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMSWKFN*FPNIAS
Trigger: AGAAGCAATGTTTGGGAAGCAATTGAATTTCCAGGA...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACGGAATGTGCGAACGGTaGTTTTCTGAAAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHGMCER*FSERAM
Trigger: CATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCC...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAGTGGCTGGGACATCCTaGCTGGACCTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVVAGTS*LDLSWP
Trigger: TGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCAC...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGATTGGCCTTCAGGATaGCCTGCATTCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNDWPSG*PAFHCL
Trigger: AAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCCCAAGGTACCCACACTaGCCTCTCTCAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLPRYPH*PLSSSQ
Trigger: CTGAGAGCTTGAGAGAGGGCAGTGTGGGTACCTTGG...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCAAGAATACTGCTGCTaGTACATAGGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKQEYCC*YIGDWG
Trigger: GCCCCAGTCCCCTATGTAGCAGCAGCAGTATTCTTG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCACACACTTTGCATATaGTCTGGACACCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKHTLCI*SGHQWP
Trigger: GGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGAGAAGGTTCCAAGAATaGTGGCACTTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLRRFQE*WHFLCL
Trigger: GAGACAGAGAAAGTGCCAGCATTCTTGGAACCTTCT...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCTCACTCATTGGTTTCTaGAGAAGAGAACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCSLIGF*RRELHQ
Trigger: CTGATGGAGTTCTCTTCTGCAGAAACCAATGAGTGA...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp TTCCCCCTTCCTGGGCTGCAGCCTGAAAACTCACTGCAGGCAGTAAGTTGGAGCATTTCAAAAGCCTCCTaGCATCCTAATGACATTTCC +
Preference number: 4 (lower is better)
Translates to: FPLPGLQPENSLQAVSWSISKAS*HPNDIS
Trigger: GGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAAT...GCTCCAACTTACTGCCTGCAGTGAGTTTTCAGGCTGCAGCCCAGGAAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFSFSSC*SGIRGT
Trigger: CGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCT...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCTTACCTGCAGGTTGGTaGCCTCCTCTGCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLLPAGW*PPLPTR
Trigger: TCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAA...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGTGCTGCTCTGTTTCTaGCTGTGTGGACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGVLLCF*LCGLGQ
Trigger: TTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCAC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCTGGATGGATATTTCCTaGAAATTCAATTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPWMDIS*KFNCFP
Trigger: TGGGAAGCAATTGAATTTCCAGGAAATATCCATCCA...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGCCAGGTCAACCAGATaGAGTTTGGCATGTCGTACA +
Preference number: 4 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEARSTR*SLACRT
Trigger: TGTACGACATGCCAAACTCCATCTGGTTGACCTGGC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCGGAAGGGTGGGCTCTaGGACTGTCTGAATTCACGT +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWRKGGL*DCLNSR
Trigger: ACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTGCCATGACAAAGCTTTaGATGTGTAATTCTATACTG +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFAMTKL*MCNSIL
Trigger: CAGTATAGAATTACACATCCAAAGCTTTGTCATGGC...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATATGCCAATAGGTCTTTaGGTGAGCCATAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHMPIGL*VSHSSA
Trigger: AGCTGAACTATGGCTCACCCAAAGACCTATTGGCAT...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTTTGCTTGTTATCCAATaGCTGAAAACCATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: STALPVAGTSCLDLSWPFLLVIQ*LKTIGL
Trigger: CAAACCAATGGTTTTCAGCCATTGGATAACAAGCAA...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCAACTGTGCCATGCCTaGGGCTGTTTCTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHQLCHA*GCFYLF
Trigger: AAACAAATAGAAACAGCCCCAGGCATGGCACAGTTG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTGTGAGCCACCATGCCTaGCTTGTCCCTCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGVSHHA*LVPLLR
Trigger: ACGAAGGAGAGGGACAAGCCAGGCATGGTGGCTCAC...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 72 bp GATCCAGGAGATGATGTCTCAGTGGGAGATCTAATGTaGAAAGACTCTGGCAGGGTATGTGGCTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: DPGDDVSVGDLM*KDSGRVCGSCL
Trigger: CAGGCATGAGCCACATACCCTGCCAGAGTCTTTCAACATTAGATCTCCCACTGAGACATCATCTCCTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACTTGACAAATGAATGGTaGAAATGCAGTGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHLTNEW*KCSGNG
Trigger: CCCGTTCCCACTGCATTTTCACCATTCATTTGTCAA...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCTGTTCCATTGAACTGTaGGGGCCAGGAGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLCSIEL*GPGVDQ
Trigger: CTGGTCCACTCCTGGCCCTCACAGTTCAATGGAACA...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCCTTACTATGTTCCATTaGACTGTGAGGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCLTMFH*TVRARS
Trigger: ACTCCTGGCCCTCACAGTTCAATGGAACATAGTAAG...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTACCAGGAGTTGGAGGCTaGCTAGTGAGGTATGGTCGC +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVPGVGG*LVRYGR
Trigger: GCGACCATACCTCACTAGTCAGCCTCCAACTCCTGG...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGTTGGTGGCCTCCTCTaGCCACCAGACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCVGGLL*PPDFKL
Trigger: GAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAAC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAGTGGGGTGCTGGTGCTaGTCTGTTTCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLVGCWC*SVSGCV
Trigger: CACACAGCCAGAAACAGAGCAGCACCAGCACCCCAC...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTACCAGTGGGGTGCTGGTaGTGCTCTGTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVPVGCW*CSVSGC
Trigger: ACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGG...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAATATCTGGATAGTCTaGTTCACCATCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVNIWIV*FTISSL
Trigger: CAGGGAGGAGATGGTGAAGCAGACTATCCAGATATT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGGTCACTGTAACGCTCTaGACCCCCTGTGATAGTGAA +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKVTVTL*TPCDSE
Trigger: TTCACTATCACAGGGGGTGCAGAGCGTTACAGTGAC...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCTCCAAGGAGAGTGTTaGAATCATAGTTGTCATGCA +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLQGEC*NHSCHA
Trigger: TGCATGACAACTATGATTGCAACACTCTCCTTGGAG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCTTCATTCTTTATGAGTaGCACTCGCTGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCFILYE*HSLCKS
Trigger: AGATTTGCACAGCGAGTGGCACTCATAAAGAATGAA...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACATTCACGTCTATCCATaGCAGCCAAGTGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNIHVYP*QPSGEP
Trigger: AGGCTCTCCACTTGGCTGGCATGGATAGACGTGAAT...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGATTGGCCTTCAGGATaGCCTGCATTCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGDWPSG*PAFHCL
Trigger: AAGGCAGTGGAATGCAGGGCATCCTGAAGGCCAATC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACCCCGCATGGGGCCATaGCACACATCTCTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLPRMGP*HTSLSV
Trigger: TACTGACAGAGATGTGTGGCATGGCCCCATGCGGGG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAGACTGGGCTCAGGTCTaGTCTCTGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVDWAQV*SLDVPG
Trigger: GCCTGGAACATCCAGAGAGCAGACCTGAGCCCAGTC...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGATCTCTCTTTGCACCTTaGCGGGTTCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGSLFAP*RVLTLP
Trigger: TGGGAGTGTGAGAACCCGGCAAGGTGCAAAGAGAGA...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCACTGTCTCCCCCACATaGTCACATGGCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCTVSPT*SHGPNP
Trigger: GGGATTTGGGCCATGTGAGCATGTGGGGGAGACAGT...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATGGGACCATTCATGCTaGGAGTCAGATGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVWDHSC*ESDVWR
Trigger: TCTCCAGACATCTGACTCCCAGCATGAATGGTCCCA...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCAACCAGATGGAGTTTaGCATGTCGTACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEQPDGV*HVVQLQ
Trigger: CTGCAACTGTACGACATGCCAAACTCCATCTGGTTG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTGCCAGGTCAACCAGATaGAGTTTGGCATGTCGTACA +
Preference number: 4 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESARSTR*SLACRT
Trigger: TGTACGACATGCCAAACTCCATCTGGTTGACCTGGC...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACGCCTCTGTTAGAAGATaGCCCCCTACTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDASVRR*PPTPVF
Trigger: AAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGC...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTCGGAAGGGTGGGCTCTaGGACTGTCTGAATTCACGT +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGRKGGL*DCLNSR
Trigger: ACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCG...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNFSLWK*GVSAQI
Trigger: GATTTGGGCTGACACTCCCCACTTCCACAGGGAAAA...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCTTTTTAGCAAGATCTaGGCAAGCTACATTTTAACT +
Preference number: 4 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLLFSKI*ASYILT
Trigger: AGTTAAAATGTAGCTTGCCCAGATCTTGCTAAAAAG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACTCCAGGCTGTAGACTaGGCTCAGGTCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLLQAVD*AQVCSL
Trigger: CAGAGAGCAGACCTGAGCCCAGTCTACAGCCTGGAG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTTCTTTCCCCTGCCTTaGGTAATTTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLFFPLP*VISSHA
Trigger: TGCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACTCCTGCCTCACTCATTaGTTTCTGCAGAAGAGAACT +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHSCLTH*FLQKRT
Trigger: AGTTCTCTTCTGCAGAAACCAATGAGTGAGGCAGGA...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
3UTR CAA 72 bp AGGTGGGACCAGAGCAATCTATCATCTAGGACTAATTaGGCCCCACTTCTGAGGCAGTACCTTATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RWDQSNLSSRTN*APLLRQYLMCL
Trigger: GAGACACATAAGGTACTGCCTCAGAAGTGGGGCCAAATTAGTCCTAGATGATAGATTGCTCTGGTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGGGCTTTCAGGCGAGTaGACATTGTTTTATACCTTC +
Preference number: 4 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEGLSGE*TLFYTF
Trigger: GAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCTTAAGGCCAGGAATTTaGGACCATCCTGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLLRPGI*DHPEPH
Trigger: GTGTGGCTCAGGATGGTCTCAAATTCCTGGCCTTAA...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTCAAGGGTAACCCTCTaGAGATCTCCAGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWSRVTL*RSPEHA
Trigger: AGCATGCTCTGGAGATCTTCAGAGGGTTACCCTTGA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGAACTGAGACCCACATaGGGCCTGGACTATGTTAGG +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCELRPT*GLDYVR
Trigger: CCTAACATAGTCCAGGCCTCATGTGGGTCTCAGTTC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACGTTCCACCTGAATCTTaGCTTTGCATGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDVPPES*LCMLSP
Trigger: AGGAGACAGCATGCAAAGTCAAGATTCAGGTGGAAC...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTACACAGACATCGAATCTaGCAGTGCCTTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVHRHRI*QCLDLG
Trigger: TCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTG...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTGTCTTCCAGTGGGGTaGTGGTGCTGCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGCLPVG*WCCSVS
Trigger: AGAAACAGAGCAGCACCAGCACCCCACTGGAAGACA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKRCLHL*FILAGI
Trigger: TATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCTAGCACTCTGGCCTTaGCTGGCCCTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELLALWP*LALPAA
Trigger: AGCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTCCAAGGAGAGTGTTaGAATCATAGTTGTCATGCA +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHLQGEC*NHSCHA
Trigger: TGCATGACAACTATGATTGCAACACTCTCCTTGGAG...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTGCCAAGAATACTGCTaGTGCTACATAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWCQEYC*CYIGDW
Trigger: CCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTTTCCATATACAGGATaGTCTCAGTGCCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVFPYTG*SQCLST
Trigger: TGTGGAAAGGCACTGAGAGCATCCTGTATATGGAAA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCATATTCAAGGAAACACTaGTTTTTCCTCCCACATTTG +
Preference number: 4 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPYSRKH*FFLPHL
Trigger: CAAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATA...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCTACCAGCTGGCATGCTaGTTGCTCTTTGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLYQLAC*LLFAEF
Trigger: GAACTCAGCAAAGAGCAAGCAGCATGCCAGCTGGTA...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELSGCVD*GKARAG
Trigger: TCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTATGGTGAAAATGCAGTaGGAACGGGTTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESMVKMQ*ERVEAW
Trigger: CCAAGCTTCAACCCGTTCCCACTGCATTTTCACCAT...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACCAACCAGATGGAGTTTaGCATGTCGTACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNQPDGV*HVVQLQ
Trigger: CTGCAACTGTACGACATGCCAAACTCCATCTGGTTG...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGACACTGGTCATCATaGAGTTTCTATAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLGHWSS*SFYKEC
Trigger: ACATTCCTTATAGAAACTCCATGATGACCAGTGTCC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTTGTCTCTTAGGACACTaGTCATCATGGAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATCLLGH*SSWSFY
Trigger: ATAGAAACTCCATGATGACCAGTGTCCTAAGAGACA...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATCCGCTGCCCCTCCCTaGCTGCAGCTGGGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAESAAPP*LQLGWN
Trigger: GTTCCAACCCAGCTGCAGCCAGGGAGGGGCAGCGGA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCATCTCCCCTTCACTCTaGCCTTCTAATTATATAAAA +
Preference number: 4 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIISPSL*PSNYIK
Trigger: TTTTATATAATTAGAAGGCCAGAGTGAAGGGGAGAT...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCAGCGACTCTGTGCTTaGGACACAGCAATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFQRLCA*DTAMSK
Trigger: CTTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACTGACTAGTGAGGTATaGTCGCACCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLLTSEV*SHHCTP
Trigger: TGGGGTGCAGTGGTGCGACCATACCTCACTAGTCAG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCTTGAGCCCAGGAGTTaGAGGCTGACTAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFLEPRS*RLTSEV
Trigger: TACCTCACTAGTCAGCCTCCAACTCCTGGGCTCAAG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCACTCTAAACCTCAGTaGTTTATGACAAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHHSKPQ*FMTSSI
Trigger: TATGCTGCTTGTCATAAACCACTGAGGTTTAGAGTG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCCAGCCTCTGAGTAGCTaGGATTACAGGTACGCAACA +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLQPLSS*DYRYAT
Trigger: TGTTGCGTACCTGTAATCCCAGCTACTCAGAGGCTG...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCATCAGGCTGCTTTCCTaGAACCAGGGACTGACTAGG +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCIRLLS*NQGLTR
Trigger: CCTAGTCAGTCCCTGGTTCCAGGAAAGCAGCCTGAT...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTATCAGGCTGCTTTCCTaGAACCAGGGACTGACTAGG +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGIRLLS*NQGLTR
Trigger: CCTAGTCAGTCCCTGGTTCCAGGAAAGCAGCCTGAT...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGACAGCAGAGAGACTCTaGCCAGACAGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELTAERL*PDRWPQ
Trigger: CTGGGGCCACCTGTCTGGTCAGAGTCTCTCTGCTGT...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGTATATGCCGCTGGGTaGTTTCTTCCTTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCVYAAG*FLPSGD
Trigger: GTCACCTGAAGGAAGAAATCACCCAGCGGCATATAC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTGTATATGCCGCTGGGTaGTTTCTTCCTTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGVYAAG*FLPSGD
Trigger: GTCACCTGAAGGAAGAAATCACCCAGCGGCATATAC...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGGGGCTTTCAGGCGAGTaGACATTGTTTTATACCTTC +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKGLSGE*TLFYTF
Trigger: GAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCC...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKLRVIE*IHCWRI
Trigger: AATTCTCCAGCAGTGAATTCACTCGATCACACGAAG...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGGTGTGAGCATCCTCTaGCATTATATTTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCGVSIL*HYILMV
Trigger: CACCATCAAAATATAATGTCAGAGGATGCTCACACC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAGCAGTGGGAACGGGTTaGAGCTTGGTTCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLAVGTG*SLVHRS
Trigger: ACTCCTATGAACCAAGCTTCAACCCGTTCCCACTGC...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGTTGACAAATGAATGGTaGAAATGCAGTGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKLTNEW*KCSGNG
Trigger: CCCGTTCCCACTGCATTTTCACCATTCATTTGTCAA...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTCCTTGCTTGACAAATaGATGGTGAAAATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCSLLDK*MVKMQW
Trigger: CCACTGCATTTTCACCATTCATTTGTCAAGCAAGGA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCCATAGAACAGCAAGCTaGATCTCCCCTTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCHRTAS*ISPSLW
Trigger: CCAGAGTGAAGGGGAGATTCAGCTTGCTGTTCTATG...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACCAGTTCAGTTCCACCTaGATCTTGACTTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDQFSST*ILTLHA
Trigger: AGCATGCAAAGTCAAGATTCAGGTGGAACTGAACTG...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR GCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCGGCATGTCGTACAGTTaGAGATCCTGGTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLGMSYS*RSWFLA
Trigger: AGCAAGGAACCAGGATCTGCAACTGTACGACATGCC...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGGTTTAATCTTCTCCTaGATGATCCTGTTACCCAGT +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCGLIFS*MILLPS
Trigger: ACTGGGTAACAGGATCATGCAGGAGAAGATTAAACC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCTTGCTGCACACACTTTaGATATGCTCTGGACACCAG +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLLLHTL*ICSGHQ
Trigger: CTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAA...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCAAGCTCCACGTCCTTTaGCTCTTCCCATCACCCAAT +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLKLHVL*LFPSPN
Trigger: ATTGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTT...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCACAAAACCAGCCCTaGCTCCAAGAGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKPQNQP*LQEAHS
Trigger: GCTGTGGGCCTCTTGGAGCCAGGGCTGGTTTTGTGG...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTGGGACCATTCATGCTaGGAGTCAGATGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCWDHSC*ESDVWR
Trigger: TCTCCAGACATCTGACTCCCAGCATGAATGGTCCCA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACTGGATGGATATTTCCTaGAAATTCAATTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHWMDIS*KFNCFP
Trigger: TGGGAAGCAATTGAATTTCCAGGAAATATCCATCCA...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGGAGGCTTCATGTCTTaGATCCAAAAGATCATAACC +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCGGFMS*IQKIIT
Trigger: GGTTATGATCTTTTGGATCCAAGACATGAAGCCTCC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACGGACACTGGTCATCATaGAGTTTCTATAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHGHWSS*SFYKEC
Trigger: ACATTCCTTATAGAAACTCCATGATGACCAGTGTCC...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTATAAAATAGGGGTGTaGATTAGAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCYKIGV*IRGARW
Trigger: CCATCGAGCTCCTCTAATCCACACCCCTATTTTATA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAAATGTTGAAAGACTCTaGCAGGGTATGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVNVERL*QGMWLM
Trigger: CATGAGCCACATACCCTGCCAGAGTCTTTCAACATT...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGCCATGACAAAGCTTTaGATGTGTAATTCTATACTG +
Preference number: 4 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLAMTKL*MCNSIL
Trigger: CAGTATAGAATTACACATCCAAAGCTTTGTCATGGC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTCTCTCTCTCATCCCTaGGACTCTGCCTTGCAAATT +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWSLSHP*DSALQI
Trigger: AATTTGCAAGGCAGAGTCCCAGGGATGAGAGAGAGA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCCAAGCTGGAGTGCAATaGCACAATTTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCQAGVQ*HNFGSL
Trigger: CAGTGAGCCGAAATTGTGCCATTGCACTCCAGCTTG...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACAGGTTCCAAGAATGCTaGCACTTTCTCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNRFQEC*HFLCLC
Trigger: ACAGAGACAGAGAAAGTGCCAGCATTCTTGGAACCT...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCCTTCCTCCTATTCCTTaGGAGATGCATTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLLPPIP*EMHSGL
Trigger: TAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAG...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATCTGGCTGTCTCCGGTaGGAGGGATGGACGACACTG +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAESGCLR*EGWTTL
Trigger: CAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACTGCAAATCTGCAGGTTaGTATAGACTCATCAAGATT +
Preference number: 4 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHCKSAG*YRLIKI
Trigger: AATCTTGATGAGTCTATATCAACCTGCAGATTTGCA...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATCAAGGGTAACCCTCTaGAGATCTCCAGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLSRVTL*RSPEHA
Trigger: AGCATGCTCTGGAGATCTTCAGAGGGTTACCCTTGA...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTGTTTTGGGACTCATTaGAGTTACTTGGAAACTTAC +
Preference number: 4 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVCFGTH*SYLETY
Trigger: GTAAGTTTCCAAGTAACTTCAATGAGTCCCAAAACA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCAGTGGGGTGCTGGTaGTGCTCTGTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKPVGCW*CSVSGC
Trigger: ACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGG...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGGCCTTCAGGATGCCCTaGATTCCACTGCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKAFRMP*IPLPCL
Trigger: CAGGCAAGGCAGTGGAATGCAGGGCATCCTGAAGGC...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGGGTTTAATCTTCTCCTaGATGATCCTGTTACCCAGT +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKGLIFS*MILLPS
Trigger: ACTGGGTAACAGGATCATGCAGGAGAAGATTAAACC...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTATGCCAAGAATACTGCTaGTGCTACATAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVCQEYC*CYIGDW
Trigger: CCAGTCCCCTATGTAGCAGCAGCAGTATTCTTGGCA...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCACAATTCAAGCCTCTaGCTGGATCAGGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLHNSSL*LDQVCQ
Trigger: TTGGCAAACCTGATCCAGGCAGAGGCTTGAATTGTG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCACAATTCAAGCCTCTaGCTGGATCAGGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFHNSSL*LDQVCQ
Trigger: TTGGCAAACCTGATCCAGGCAGAGGCTTGAATTGTG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCA +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFVTLSA*SLLKIS
Trigger: TGAAATCTTCAAGAGGGACCACGCTGACAGCGTTAC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTGCTGTATATGCCGCTaGGTGATTTCTTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGCCICR*VISSFR
Trigger: CCTGAAGGAAGAAATCACCCAGCGGCATATACAGCA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELSFSSC*SGIRGT
Trigger: CGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCT...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCTTCCAGTGGGGTGCTaGTGCTGCTCTGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKLPVGC*CCSVSG
Trigger: GCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAACACAGTCCCCTCCATaGGAATCAAAGTCACTAGTT +
Preference number: 4 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGTQSPP*ESKSLV
Trigger: AACTAGTGACTTTGATTCCCATGGAGGGGACTGTGT...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGCAAATCTTCCAAACTaGAGGCTTCATGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: THLGSGSSTHELKDRLLNANLPN*RLHVLD
Trigger: ATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAAGACACCAGGAGCAGTaGACCAGCACTTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLRHQEQ*TSTFIQ
Trigger: CTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGTCT...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAGGTTCACACCCCGCATaGGGCCATGCCACACATCTC +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEGSHPA*GHATHL
Trigger: GAGATGTGTGGCATGGCCCCATGCGGGGTGTGAACC...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTCTTTTTAGCAAGATCTaGGCAAGCTACATTTTAACT +
Preference number: 4 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATLFSKI*ASYILT
Trigger: AGTTAAAATGTAGCTTGCCCAGATCTTGCTAAAAAG...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGGTCATATACTGTCTCTaGGTTCCAATTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKVIYCL*VPISVP
Trigger: TGGCACAGAAATTGGAACCCAGAGACAGTATATGAC...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCTTTCCACAGGCTGCATaGAGAGACAATGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLFPQAA*RDNELC
Trigger: GCAGAGTTCATTGTCTCTCCATGCAGCCTGTGGAAA...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCATGGCTGTAGGTGGTaGTCCTGCTTTTCCATATAC +
Preference number: 4 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLHGCRW*SCFSIY
Trigger: GTATATGGAAAAGCAGGACCACCACCTACAGCCATG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCCTGCTTCCTCCTGGTaGTTCTTTCCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELPASSW*FFPLPW
Trigger: CCAAGGCAGGGGAAAGAACCACCAGGAGGAAGCAGG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTACAGCCTCTGAGTAGCTaGGATTACAGGTACGCAACA +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVQPLSS*DYRYAT
Trigger: TGTTGCGTACCTGTAATCCCAGCTACTCAGAGGCTG...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTCTTCCTCCTATTCCTTaGGAGATGCATTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGLPPIP*EMHSGL
Trigger: TAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAG...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 72 bp GCAATCATAGGGCTCCCCTCACTTGTTTCCCTTCTCTaGCGGATCAATCATACCCTATATTGCTTGTTATCC +
Preference number: 4 (lower is better)
Translates to: AIIGLPSLVSLL*RINHTLYCLLS
Trigger: GGATAACAAGCAATATAGGGTATGATTGATCCGCAAGAGAAGGGAAACAAGTGAGGGGAGCCCTATGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGGGCTTTCAGGCGAGTaGACATTGTTTTATACCTTC +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCGLSGE*TLFYTF
Trigger: GAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTTGACAAATGAATGGTaGAAATGCAGTGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGLTNEW*KCSGNG
Trigger: CCCGTTCCCACTGCATTTTCACCATTCATTTGTCAA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACAGCTTCATTCTTTATaGGTGCCACTCGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLQLHSL*VPLAVQ
Trigger: TTGCACAGCGAGTGGCACTCATAAAGAATGAAGCTG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTGATAGTCGCATTCTTTaGCCTTCTTCTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFDSRIL*PSSGFP
Trigger: AGGAAACCCAGAAGAAGGTCAAAGAATGCGACTATC...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCCACATTCCACTGGTGTaGGCATCCTCTGACATTATA +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCHIPLV*ASSDII
Trigger: TATAATGTCAGAGGATGCTCACACCAGTGGAATGTG...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTACATCTTCAGGGCTCTTaGGAGTGTGTGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLHLQGS*ECVCVC
Trigger: ACATACACACACACACTCTCAAGAGCCCTGAAGATG...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTACCCAATACCCAACCTaGCATCATTGTCCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFTQYPT*HHCPKL
Trigger: AAGCTTAGGACAATGATGGCAGGTTGGGTATTGGGT...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTTTCTCCCAGGGCCTTaGCTTCAGAAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCFLPGP*LQKISV
Trigger: AACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAACCCTCGCGAATATCTaGATAGTCTGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLTLANI*IVCFTI
Trigger: GATGGTGAAGCAGACTATCCAGATATTCGCGAGGGT...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAGAACGGGTTGAAGCTTaGTTCATAGGAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLERVEA*FIGVSA
Trigger: TGCAGAGACTCCTATGAACCAAGCTTCAACCCGTTC...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGTCTCTTAGGACACTaGTCATCATGGAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESCLLGH*SSWSFY
Trigger: ATAGAAACTCCATGATGACCAGTGTCCTAAGAGACA...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCTCTGGCAGGGTATGTaGCTCATGCCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELLWQGM*LMPAIP
Trigger: TGGGATTGCAGGCATGAGCCACATACCCTGCCAGAG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAACTCAGGGAAACCACTaGGCTCTACCTGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAETQGNH*ALPGSP
Trigger: GGGGGAACCAGGTAGAGCCCAGTGGTTTCCCTGAGT...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCAACTGTGCCATGCCTaGGGCTGTTTCTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFQLCHA*GCFYLF
Trigger: AAACAAATAGAAACAGCCCCAGGCATGGCACAGTTG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGTTCTTCCTCCAGTTGTaGTCGCAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKFFLQL*SQLLLL
Trigger: CAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAA...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGAATCTGCCAGTGCCTTaGTCTTGGACTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKNLPVP*SWTSQP
Trigger: AGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATT...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR TCA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACAATGTAGTGACAAGTTaGTATACTTGGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDNVVTS*YTWPLL
Trigger: TAACAGAGGCCAAGTATATCAACTTGTCACTACATT...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR TCA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGTGTTTTGGGACTCATTaGAGTTACTTGGAAACTTAC +
Preference number: 4 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKCFGTH*SYLETY
Trigger: GTAAGTTTCCAAGTAACTTCAATGAGTCCCAAAACA...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAACTGCTTGCTCTTTGCTaGGTTCCCTCTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAELLALC*VPSQCG
Trigger: CCCACACTGAGAGGGAACTCAGCAAAGAGCAAGCAG...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGGCTGGAGAATTTACCTaGAGGTTGGTGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELAGEFT*RLVASS
Trigger: AGAGGAGGCCACCAACCTGCAGGTAAATTCTCCAGC...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATGCATTCCACTGCCTTaGCTGTGGCTGGGACATCCT +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAECIPLP*LWLGHP
Trigger: AGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGGTTTAATCTTCTCCTaGATGATCCTGTTACCCAGT +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCGLIFS*MILLPS
Trigger: ACTGGGTAACAGGATCATGCAGGAGAAGATTAAACC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAGGAAATTATTCCACCTaGTTCCTCCTGGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVGNYST*FLLVVL
Trigger: AAGAACCACCAGGAGGAAGCAGGTGGAATAATTTCC...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAACTGGGACATCCTGCCTaGACCTGTCATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAELGHPA*TCHGHF
Trigger: GAAATGGCCATGACAGGTCCAGGCAGGATGTCCCAG...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCTTGAGCCCAGGAGTTaGAGGCTGACTAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELLEPRS*RLTSEV
Trigger: TACCTCACTAGTCAGCCTCCAACTCCTGGGCTCAAG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAATGCCAATAGGTCTTTaGGTGAGCCATAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLMPIGL*VSHSSA
Trigger: AGCTGAACTATGGCTCACCCAAAGACCTATTGGCAT...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAATTCTTCCTCCAGTTGTaGTCGCAGCTTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEFFLQL*SQLLLL
Trigger: CAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAA...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAACGTCACTACAACAGTaGGCTGAAGCCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAETSLQQ*AEAFTL
Trigger: CAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGT...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCTGTTCAAAAATGTATaGCAGTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWLFKNV*QCPWDN
Trigger: ATTATCCCAAGGACACTGTCATACATTTTTGAACAG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCATAGAACAGCAAGCTaGATCTCCCCTTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELHRTAS*ISPSLW
Trigger: CCAGAGTGAAGGGGAGATTCAGCTTGCTGTTCTATG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTTTCATTCTTTATGAGTaGCACTCGCTGTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGFILYE*HSLCKS
Trigger: AGATTTGCACAGCGAGTGGCACTCATAAAGAATGAA...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCCCTTGGCCAGTTGCTaGACACACTTTGCATATGCT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELPLASC*THFAYA
Trigger: AGCATATGCAAAGTGTGTGCAGCAACTGGCCAAGGG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTTTGTTTCCCTTCTCTTaGGGATCAATCATACCCTAT +
Preference number: 4 (lower is better)
Translates to: QGEEELVFKETLLFPPTFLFPFS*GSIIPY
Trigger: ATAGGGTATGATTGATCCGCAAGAGAAGGGAAACAA...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTGGATGGATATTTCCTaGAAATTCAATTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWWMDIS*KFNCFP
Trigger: TGGGAAGCAATTGAATTTCCAGGAAATATCCATCCA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTGCCAAGGGAGAGAGCTaGCAAATCGTTAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGAKGES*QIVKNK
Trigger: TTTATTTTTAACGATTTGCCAGCTCTCTCCCTTGGC...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTTTTCCCTGTGGAAGTaGGGAGTGTCAGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELFSLWK*GVSAQI
Trigger: GATTTGGGCTGACACTCCCCACTTCCACAGGGAAAA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTCCCAGGTGGATTGCTaGAAAGTCTTTTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCSQVDC*KVFSKH
Trigger: ATGTTTTGAAAAGACTTTCCAGCAATCCACCTGGGA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTATGTGTCTCTATACAATaGCTGTTTTGGGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVCVSIQ*LFWEVS
Trigger: AGAAACCTCCCAAAACAGTCATTGTATAGAGACACA...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCGCTGCCTTCATCTGTaGTTCATTCTTGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKRCLHL*FILAGI
Trigger: TATGCCAGCAAGAATGAAGCACAGATGAAGGCAGCG...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCTATTCCTTGGGAGATaGATTCAGGGCTACACTCAG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELLFLGR*IQGYTQ
Trigger: CTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGTGCTGTATATGCCGCTaGGTGATTTCTTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKCCICR*VISSFR
Trigger: CCTGAAGGAAGAAATCACCCAGCGGCATATACAGCA...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGGAACGGGTTGAAGCTTaGTTCATAGGAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELERVEA*FIGVSA
Trigger: TGCAGAGACTCCTATGAACCAAGCTTCAACCCGTTC...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCATCATGGCTGTAGGTaGTGGTCCTGCTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELHHGCR*WSCFSI
Trigger: TATGGAAAAGCAGGACCACCACCTACAGCCATGATG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTTACTGGAAACAATTTaGCTCCTTTGGGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELLLETI*LLWGWL
Trigger: AAGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAGCTACTTGCTGTATATaGCGCTGGGTGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEATCCI*RWVISS
Trigger: GGAAGAAATCACCCAGCGGCATATACAGCAAGTAGC...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGATCAAAGTCACTAGTTaGTCCCAGCAGCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELIKVTS*SQQPIV
Trigger: AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGAT...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAAACGGTCTCTTGGTTTaGATCCTGATCAAAAATTCT +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVNGLLV*ILIKNS
Trigger: AGAATTTTTGATCAGGATGCAAACCAAGAGACCGTT...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAACTATATTACCACTCTaGTCCCCTCCAGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAETILPL*SPPGSS
Trigger: TGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR GCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTATATTCAAGGAAACACTaGTTTTTCCTCCCACATTTG +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVYSRKH*FFLPHL
Trigger: CAAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATA...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTTTCTCCCAGGGCCTTaGCTTCAGAAAATCTCTGTT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELFLPGP*LQKISV
Trigger: AACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGTCCACTGATCCCAGGTaGATTGCTGGAAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKSTDPR*IAGKSF
Trigger: AAAAGACTTTCCAGCAATCCACCTGGGATCAGTGGA...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CCA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTATTGCTTGTTATCCAATaGCTGAAAACCATTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVLLVIQ*LKTIGL
Trigger: CAAACCAATGGTTTTCAGCCATTGGATAACAAGCAA...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR TCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCATTTTGGCCTAGAGTaGACTCAGATACTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKHFGLE*TQILLV
Trigger: GACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATG...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp TCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGGCCTGTTTGCCCATATaGAAAGATGGTACCATTGTA +
Preference number: 4 (lower is better)
Translates to: SQKLIKIYTKRHYNSELKACLPI*KDGTIV
Trigger: TACAATGGTACCATCTTTGCATATGGGCAAACAGGC...CTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR GCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAGGGTTCCAATTTCTGTaGCAGTCTGCTATTGCTACA +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEGFQFL*QSAIAT
Trigger: TGTAGCAATAGCAGACTGGCACAGAAATTGGAACCC...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTGGCCCATATTTTCCTaGTTCTTTGCATGCCTGATT +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELWPIFS*FFACLI
Trigger: AATCAGGCATGCAAAGAAGCAGGAAAATATGGGCCA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR GCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGTCTGTGCTTCATTCTTaGTGGCATAATTCATGGATG +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELSVLHS*WHNSWM
Trigger: CATCCATGAATTATGCCAGCAAGAATGAAGCACAGA...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGATTTCAAAAGCCTCCTaGCATCCTAATGACATTTCC +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELISKAS*HPNDIS
Trigger: GGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAAT...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR TCA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAATGTAGTGACAAGTTaGTATACTTGGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELNVVTS*YTWPLL
Trigger: TAACAGAGGCCAAGTATATCAACTTGTCACTACATT...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
3UTR CAA 72 bp AATTCTGAACTAGTTTTTGTCTTGGGGCTAATAACTTaGTTAACTCTCTTTCTCATTCAGCACTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: NSELVFVLGLIT*LTLFLIQHCNA
Trigger: AGCATTACAGTGCTGAATGAGAAAGAGAGTTAACAAAGTTATTAGCCCCAAGACAAAAACTAGTTCAGAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CCA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAATCTCCCCTTCACTCTaGCCTTCTAATTATATAAAA +
Preference number: 4 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEISPSL*PSNYIK
Trigger: TTTTATATAATTAGAAGGCCAGAGTGAAGGGGAGAT...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCCCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS TCA 90 bp ACCAGACAGGTGGCCCCAGGCTCTTCCAGCTGGCTGACAACCTGCTaGGGAGGCCCTTCCAGTGCCACCCGCTGCACCCCTCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: TRQVAPGSSSWLTTC*GGPSSATRCTPQDC
Trigger: ACAGTCCTGAGGGGTGCAGCGGGTGGCACTGGAAGGGCCTCCTCAGCAGGTTGTCAGCCAGCTGGAAGAGCCTGGGGCCACCTGTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394362.5
CDS-3UTR CAA 90 bp CCAGCCAGCGGGAATGATCTCCTCATCAGGCTGCTTTCCTGGAACCAGGGACTGCCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PASGNDLLIRLLSWNQGLPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...CAGTCCCTGGTTCCAGGAAAGCAGCCTGATGAGGAGATCATTCCCGCTGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCTTGAGGGCTGCCCACGGAGCAAAAGGCCCCTaGGCCAGTTGCTGCACACAC +
Preference number: 5 (lower is better)
Translates to: EPPGPGGSSSRTSLRAAHGAKGP*ASCCTH
Trigger: GTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTCC...GTGGGCAGCCCTCAAGGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCTCTGGGAGATCAGGATaGGCCTTCAGGATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: ALPAAPATTGRMLWSAPASGRSG*AFRMPC
Trigger: GCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGA...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACCTAGCACTCTGGCCTaGCCTGGCCCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPPSTLA*PGPASS
Trigger: GCTGCTGGCAGGGCCAGGCAAGGCCAGAGTGCTAGG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCCCCCTACTCCAGTCTTaGCAACTCGCTCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAPLLQS*QLALNQ
Trigger: CTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGG...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCTGCAGCTGGGTTGGAACCCCCTGGCCCAGGGGGCAGTTCTTCAAGAACCTCCCCCCTACTCCAGTCTTaGCAACTCGCTCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: AAAGLEPPGPGGSSSRTSPLLQS*QLALNQ
Trigger: CTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGG...GGAGGTTCTTGAAGAACTGCCCCCTGGGCCAGGGGGTTCCAACCCAGCTGCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp ATGCTCTGTCTGGCCTTGATGAAGGCGATGATGTCCGAGTCCGTCTaGCTGTCTCCGGTGAGAGGGATGGACGACACTGGCCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: MLCLALMKAMMSESV*LSPVRGMDDTGLLG
Trigger: CCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGACGGACTCGGACATCATCGCCTTCATCAAGGCCAGACAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 90 bp GGCAGTGCAAGATGGCCTGGACAGGGAGTGTCTAGAGCAGGAGGCTaGGTGGGCAAGTGGGTGGGCAGAAACCTGAATGAGGGCAGTGTA +
Preference number: 5 (lower is better)
Translates to: GSARWPGQGVSRAGG*VGKWVGRNLNEGSV
Trigger: TACACTGCCCTCATTCAGGTTTCTGCCCACCCACTTGCCCACCCAGCCTCCTGCTCTAGACACTCCCTGTCCAGGCCATCTTGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465719.1
CDS-3UTR CAA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATCTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCC +
Preference number: 5 (lower is better)
Translates to: GDTAVQALPPGHPGQEADLHSTA*PVAGTS
Trigger: GGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAG...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCGAGGCTGAGTATGGCTaGAGCCCAGGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFEAEYG*SPGVGG
Trigger: GCCTCCAACTCCTGGGCTCAAGCCATACTCAGCCTC...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGAGGCTGAGTATGGCTaGAGCCCAGGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMEAEYG*SPGVGG
Trigger: GCCTCCAACTCCTGGGCTCAAGCCATACTCAGCCTC...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCCGCTTCCTCCTATTCCTaGGGAGATGCATTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALPAAPATTGRMLWSAPAASSYS*GDAFRA
Trigger: AGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGC...GGCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCAGGCATGGGGACTGCTaGCCTCAGTCTAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSRHGDC*PQSKDS
Trigger: ACTGTCTTTAGACTGAGGCAAGCAGTCCCCATGCCT...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCGACGACACTGGCCTCTaGGGGATGCTGTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFDDTGL*GMLSSS
Trigger: ACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTC...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGACAGCGACTCTGTGCTaGGGACACAGCAATGAGCAA +
Preference number: 5 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQTATLC*GHSNEQ
Trigger: TTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTGT...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGACACTCCCACCCACCTaGATAGTGAGTCCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMTLPPT*IVSPSP
Trigger: TGGGCTTGGACTCACTATCAAGGTGGGTGGGAGTGT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 90 bp CTGAAGTCCTGGGCCTGTGAGGGAGCTGAGGATAGTCGCATTCTTTaGCCTTCTTCTGGGTTTCCTAGGCGGAAGGGTGGGCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LKSWACEGAEDSRIL*PSSGFPRRKGGLWD
Trigger: GTCCCAGAGCCCACCCTTCCGCCTAGGAAACCCAGAAGAAGGTCAAAGAATGCGACTATCCTCAGCTCCCTCACAGGCCCAGGACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp CTTCCAGTGGGGTGCTGGTGCTGCTCTGTTTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGATTTTCCTGGCATTCACATCACAGA +
Preference number: 5 (lower is better)
Translates to: LPVGCWCCSVSGCVD*GKARAGFSWHSHHR
Trigger: TCTGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS-3UTR CAA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QDALHSTALPVAGTSCLDSAWSL*KISKAS
Trigger: GGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGA...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTTCTGTAGCTTCACCTaGGCTTTGTCCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: WPCQQLQQPQEGCCGQPQFCSFT*ALSMSS
Trigger: GCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAA...CTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCATTCTGTAGCTTCACCTaGGCTTTGTCCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LALPAAPATTGRMLWSAPFCSFT*ALSMSS
Trigger: GCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAA...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCTTTGTTAGAGAGGAGTaGGGACCATTCATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPFVREE*GPFMLG
Trigger: TCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAA...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGACGACACTGGCCTCTaGGGGATGCTGTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIDDTGL*GMLSSS
Trigger: ACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTCTGGGAGATCAGGATaGGCCTTCAGGATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFISGRSG*AFRMPC
Trigger: GCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGTTGCTGCACACACTTaGCATATGCTCTGGACACCA +
Preference number: 5 (lower is better)
Translates to: LALPAAPATTGRMLWSAPVAAHT*HMLWTP
Trigger: TGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAAC...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCAGGCCCCTTGGCCAGTaGCTGCACACACTTTGCATA +
Preference number: 5 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPRPLGQ*LHTLCI
Trigger: TATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCCT...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATAGGCCCCTTGGCCAGTaGCTGCACACACTTTGCATA +
Preference number: 5 (lower is better)
Translates to: GDTAVQALPPGHPGQEADRPLGQ*LHTLCI
Trigger: TATGCAAAGTGTGTGCAGCAACTGGCCAAGGGGCCT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCTCCCTGCTTCTCTCTTaGCACCTTGCCGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPSLLLS*HLAGFS
Trigger: TGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGGA...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGTCCCTGCTTCTCTCTTaGCACCTTGCCGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ETQLFRHCLQVILAKRLMSLLLS*HLAGFS
Trigger: TGAGAACCCGGCAAGGTGCAAAGAGAGAAGCAGGGA...CATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 90 bp CTTCTTCTGGGTTTCCTAGGCGGAAGGGTGGGCTCTGGGACTGTCTaGATTCACGTCTATCCATGCCAGCCAAGTGGAGAGCCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLLGFLGGRVGSGTV*IHVYPCQPSGEPPE
Trigger: CTCAGGAGGCTCTCCACTTGGCTGGCATGGATAGACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCGCCTAGGAAACCCAGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp CTTCCAGTGGGGTGCTGGTGCTGCTCTGTTTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGATTTTCCTGGCATTCACATCACTTT +
Preference number: 5 (lower is better)
Translates to: LPVGCWCCSVSGCVD*GKARAGFSWHSHHF
Trigger: AAAGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEASAWSL*KISKAS
Trigger: GGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGA...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCATGCTCTGTCTGGCCTaGATGAAGGCGATGATGTCC +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLMLCLA*MKAMMS
Trigger: GGACATCATCGCCTTCATCAAGGCCAGACAGAGCAT...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTATGCTCTGTCTGGCCTaGATGAAGGCGATGATGTCC +
Preference number: 5 (lower is better)
Translates to: STALPVAGTSCLDLSWPFMLCLA*MKAMMS
Trigger: GGACATCATCGCCTTCATCAAGGCCAGACAGAGCAT...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTTGGCATGTCGTACAGTaGCAGATCCTGGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: DTAVQALPPGHPGQEADGWHVVQ*QILVPC
Trigger: GCAAGGAACCAGGATCTGCAACTGTACGACATGCCA...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCACAGCGACTCTGTGCTaGGGACACAGCAATGAGCAA +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLTATLC*GHSNEQ
Trigger: TTGCTCATTGCTGTGTCCCAAGCACAGAGTCGCTGT...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGAACTCAGATACTTCTaGTCATCCGTGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMELRYF*SSVAPL
Trigger: CAGTGGAGCCACGGATGACAAGAAGTATCTGAGTTC...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CAGGATGCCCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACAAGGTGAGGAGGAGCTaGTATTCAAGGAAACACTGC +
Preference number: 5 (lower is better)
Translates to: QDALHSTALPVAGTSCLDKVRRS*YSRKHC
Trigger: GCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTT...GTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGGGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCGCTTCCTCCTATTCCTaGGGAGATGCATTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLASSYS*GDAFRA
Trigger: AGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGC...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCAGCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCAGGCATGGGGACTGCTaGCCTCAGTCTAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: PAAHSSLLKPEQVRGAAFRHGDC*PQSKDS
Trigger: ACTGTCTTTAGACTGAGGCAAGCAGTCCCCATGCCT...GAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCGCATTCACATCACTTTaGTTAGAGAGGAGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: PGPASSSSNHRKDVVVSPAFTSL*LERSWD
Trigger: GTCCCAACTCCTCTCTAACAAAAGTGATGTGAATGC...GGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLSAWSL*KISKAS
Trigger: GGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCTATACAATGACTGTTTaGGGAGGTTTCTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: GPASSSSNHRKDVVVSPSYTMTV*GGFSTL
Trigger: CAGAGTGGAGAAACCTCCCAAAACAGTCATTGTATA...GCTGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CTGGCCCTGCCAGCAGCTCCAGCAACCACAGGAAGGATGTTGTGGTCAGCCCCAGCATTCACATCACTTTaGTTAGAGAGGAGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LALPAAPATTGRMLWSAPAFTSL*LERSWD
Trigger: GTCCCAACTCCTCTCTAACAAAAGTGATGTGAATGC...TGGGGCTGACCACAACATCCTTCCTGTGGTTGCTGGAGCTGCTGGCAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTTTTGTTAGAGAGGAGTaGGGACCATTCATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: STALPVAGTSCLDLSWPFFVREE*GPFMLG
Trigger: TCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAA...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCCAAGGTACCCTCAACCAGATGGAGTTaGGCATGTCGTACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: SAQILPSGWVKVVRPKVPSTRWS*ACRTVA
Trigger: TGCAACTGTACGACATGCCAAACTCCATCTGGTTGA...GGGTACCTTGGGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGCTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCC +
Preference number: 5 (lower is better)
Translates to: FSTSNIHSQPLYTCSASELHSTA*PVAGTS
Trigger: GGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAG...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGCTTACTATGTTCCATaGAACTGTGAGGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIAYYVP*NCEGQE
Trigger: CTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp CTTCTCTTTTCTTCCTCCAGTTGTGATCGCAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACGGCCATGTTTTCCGAGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: LLFSSSSCDRSFSSC*SGIRGTAMFSEIPR
Trigger: CCTAGGAATCTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 90 bp GTTTCTGGCTGTGTGGACTGGGGCAAGGCGAGGGCAGGATTTTCCTaGCATTCACATCACAGACATCGAATCTGCCAGTGCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: VSGCVDWGKARAGFS*HSHHRHRICQCLDL
Trigger: AAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS-3UTR CAA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCTTTGTTAGAGAGGAGTaGGGACCATTCATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIFVREE*GPFMLG
Trigger: TCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAA...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACATGCTCTGTCTGGCCTaGATGAAGGCGATGATGTCC +
Preference number: 5 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHMLCLA*MKAMMS
Trigger: GGACATCATCGCCTTCATCAAGGCCAGACAGAGCAT...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCATTGCTTCCCAAACATaGCTTCTGCAGAATGCTCTG +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLIASQT*LLQNAL
Trigger: CAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTGGAGGCTTCATGTCTaGGATCCAAAAGATCATAAC +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMWRLHV*DPKDHN
Trigger: GTTATGATCTTTTGGATCCAAGACATGAAGCCTCCA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTACTGCATTCCACTGCCTaGCCTGTGGCTGGGACATCC +
Preference number: 5 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVLHSTA*PVAGTS
Trigger: GGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAG...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GCAGCCCATAGTTCACTTCTGAAGCCAGAGCAAGTGAGGGGCGCTGCCTTCATCGTGGGAGATCTAATGTaGAAAGACTCTGGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: AAHSSLLKPEQVRGAAFIVGDLM*KDSGRV
Trigger: TACCCTGCCAGAGTCTTTCAACATTAGATCTCCCAC...GATGAAGGCAGCGCCCCTCACTTGCTCTGGCTTCAGAAGTGAACTATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATATCAATTTCTCCCATTaGCAGAGGCCAGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: GDTAVQALPPGHPGQEADINFSH*QRPVNS
Trigger: AGAGTTCACTGGCCTCTGCAAATGGGAGAAATTGAT...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTATCAATTTCTCCCATTaGCAGAGGCCAGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: STALPVAGTSCLDLSWPFINFSH*QRPVNS
Trigger: AGAGTTCACTGGCCTCTGCAAATGGGAGAAATTGAT...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTCTGATCCCAGGTGGATaGCTGGAAAGTCTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: STALPVAGTSCLDLSWPFLIPGG*LESLFK
Trigger: TTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAG...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTTAACTCTGAAAAGGTaGCTGCTTCCTCCTATTCCT +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMLTLKR*LLPPIP
Trigger: AGGAATAGGAGGAAGCAGCAACCTTTTCAGAGTTAA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 90 bp TGCTGTCTCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTaGCCAGGGCCTTTGCTGAAACAGATCCTGCCTCACTCATTGGTT +
Preference number: 5 (lower is better)
Translates to: CCLLSPAGTLCDADT*PGPLLKQILPHSLV
Trigger: AACCAATGAGTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGAGACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS GCA 90 bp TACCTTCTCTTTTCTTCCTCCAGTTGTGATCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGCACGGCCATGTTTTCCGAGATTCCT +
Preference number: 5 (lower is better)
Translates to: YLLFSSSSCDRSFSS*WSGIRGTAMFSEIP
Trigger: AGGAATCTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAAGAGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGTGTTTCAGAATCTGTTaGTTGTCATCGATGGTAACG +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMCFRIC*LSSMVT
Trigger: CGTTACCATCGATGACAACAAACAGATTCTGAAACA...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCACTTCTGTAGCTTCACCTaGGCTTTGTCCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VPSMGIKVTSCSQQPIVHFCSFT*ALSMSS
Trigger: GCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAA...GTGAACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp AGTTGCTGCACACACTTTGCATATGCTCTGGACACCAGTGGCCCCAGATCCCATCAGCCTCCAGAACTTTaGTTAGAGAGGAGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: SCCTHFAYALDTSGPRSHQPPEL*LERSWD
Trigger: GTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTG...ATGGGATCTGGGGCCACTGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp CTGCTTCCTCCTATTCCTTGGGAGATGCATTCAGGGCTACACTCAGAGGCCACTGTTGCTGCACACACTTaGCATATGCTCTGGACACCA +
Preference number: 5 (lower is better)
Translates to: LLPPIPWEMHSGLHSEATVAAHT*HMLWTP
Trigger: TGGTGTCCAGAGCATATGCAAAGTGTGTGCAGCAAC...AGTGGCCTCTGAGTGTAGCCCTGAATGCATCTCCCAAGGAATAGGAGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGGGAGCAAAAGGCCCCTaGGCCAGTTGCTGCACACAC +
Preference number: 5 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWGAKGP*ASCCTH
Trigger: GTGTGTGCAGCAACTGGCCAAGGGGCCTTTTGCTCC...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp CCTGCATTCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGAATGGACACCAGACATaGTGGATTCTATATTGTTGG +
Preference number: 5 (lower is better)
Translates to: PAFHCLACGWDILPGPVMNGHQT*WILYCW
Trigger: CCAACAATATAGAATCCACAATGTCTGGTGTCCATT...CATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 90 bp ACCAGACTTCAAACTCTTTCTGTAGCTTCACCTTGGCTTTGTCCATaGGCAGCTGCAAGTGCTCGATCTCCACCTTCAGGGCTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: TRLQTLSVASPWLCP*AAASARSPPSGLSG
Trigger: GCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 90 bp ATGCTGGGAGTCAGATGTCTGGAGAAATGGCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATTTACCTGCAGGTTGGTGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: MLGVRCLEKWLRVIE*IHCWRIYLQVGGLL
Trigger: GAGGAGGCCACCAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS GCA 90 bp TCAAACTCTTTCTGTAGCTTCACCTTGGCTTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACCTTCAGGGCTTTCAGGCGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: SNSFCSFTLALSMSS*KCSISTFRAFRRVN
Trigger: GTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 90 bp ACTCCAGTCTTTGCAACTCGCTCTGAACCAGCCAGGTCAACCAGATaGAGTTTGGCATGTCGTACAGTTGCAGATCCTGGTTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: TPVFATRSEPARSTR*SLACRTVADPGSLL
Trigger: AAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp CCCAGCCTCTCGGTGGCCTCCAGGTCAGCATCCTTAAAGAAACACAGTCCCCTCTGTTTCAGAATCTGTTaGTTGTCATCGATGGTAACG +
Preference number: 5 (lower is better)
Translates to: PSLSVASRSASLKKHSPLCFRIC*LSSMVT
Trigger: CGTTACCATCGATGACAACAAACAGATTCTGAAACA...GAGGGGACTGTGTTTCTTTAAGGATGCTGACCTGGAGGCCACCGAGAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GGAGACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATTGTTTCAGAATCTGTTaGTTGTCATCGATGGTAACG +
Preference number: 5 (lower is better)
Translates to: GDTAVQALPPGHPGQEADCFRIC*LSSMVT
Trigger: CGTTACCATCGATGACAACAAACAGATTCTGAAACA...ATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTAAACGGTCTCTTGGTTaGCATCCTGATCAAAAATTC +
Preference number: 5 (lower is better)
Translates to: DTAVQALPPGHPGQEADGKRSLG*HPDQKF
Trigger: GAATTTTTGATCAGGATGCAAACCAAGAGACCGTTT...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp CCACAAGTCCCCTTTTTGCCAAGCTCCACGTCCTTTGCCTCTTCCCATCACCCACTCCCAGCAACTGGTTaGGCAATGTTTTCAAAAACG +
Preference number: 5 (lower is better)
Translates to: PQVPFLPSSTSFASSHHPLPATG*AMFSKT
Trigger: CGTTTTTGAAAACATTGCCAAACCAGTTGCTGGGAG...TGGGTGATGGGAAGAGGCAAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTGGCATGTCGTACAGTaGCAGATCCTGGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEWHVVQ*QILVPC
Trigger: GCAAGGAACCAGGATCTGCAACTGTACGACATGCCA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTCAACCAGATGGAGTTaGGCATGTCGTACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLSTRWS*ACRTVA
Trigger: TGCAACTGTACGACATGCCAAACTCCATCTGGTTGA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTCCCCTACTCCAGTCTTaGCAACTCGCTCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESPLLQS*QLALNQ
Trigger: CTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGG...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CAA 90 bp GTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGGTGAAGGTTGTGAGGCCATGTTGACCAGGATATaGATTTCGTTATCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: VGSVSPNPPKWLGEGCEAMLTRI*ISLSLC
Trigger: ACAGAGAGATAACGAAATCAATATCCTGGTCAACAT...GGCCTCACAACCTTCACCCAGCCACTTGGGAGGATTTGGGCTGACACTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGTTCTTTCCCCTGCCTaGGGTAATTTCTTCACATGC +
Preference number: 5 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLVLSPA*GNFFTC
Trigger: GCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAAC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAACACTCCCACCCACCTaGATAGTGAGTCCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVTLPPT*IVSPSP
Trigger: TGGGCTTGGACTCACTATCAAGGTGGGTGGGAGTGT...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCTTCTGGAAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTCCATCAGAGGAGCTaGGTGCTTTTAATCTGGGGT +
Preference number: 5 (lower is better)
Translates to: ASGRVGTATKSTLAVQFHLHQRS*VLLIWG
Trigger: ACCCCAGATTAAAAGCACCAAGCTCCTCTGATGGAG...GTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTTCCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS TCA 90 bp CAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCTaGAACAGATCCTGCCTCACTCATTGGTTTCTGCAGAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: QQEHCVMLIPDQGLC*NRSCLTHWFLQKRT
Trigger: AGTTCTCTTCTGCAGAAACCAATGAGTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS TCA 90 bp CGAGTTACCAAAACATCACTCAGCCCCTTCCTGTTTGTAGAAGCCTaGGCAGAGGAGACAGCTGACTTTGGGAACAGAGAACAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RVTKTSLSPFLFVEA*AEETADFGNREQRS
Trigger: GCTCCTTTGTTCTCTGTTCCCAAAGTCAGCTGTCTCCTCTGCTCAGGCTTCTACAAACAGGAAGGGGCTGAGTGATGTTTTGGTAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538893.5
CDS GCA 90 bp TCTTTCTGTAGCTTCACCTTGGCTTTGTCCATGAGCAGCTGCAAGTaGTCGATCTCCACCTTCAGGGCTTTCAGGCGAGTGAACATTGTT +
Preference number: 5 (lower is better)
Translates to: SFCSFTLALSMSSCK*SISTFRAFRRVNIV
Trigger: AACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCSAWSL*KISKAS
Trigger: GGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGA...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTTTTGTTAGAGAGGAGTaGGGACCATTCATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVFVREE*GPFMLG
Trigger: TCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAA...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CCACTTCTGAGGCAGTACCTTATGTGTCTCTATACAATGACTGTTTTGGGAGGTGACGACACTGGCCTCTaGGGGATGCTGTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PLLRQYLMCLYTMTVLGGDDTGL*GMLSSS
Trigger: ACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTC...ACCTCCCAAAACAGTCATTGTATAGAGACACATAAGGTACTGCCTCAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGACGACACTGGCCTCTaGGGGATGCTGTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCDDTGL*GMLSSS
Trigger: ACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGCAGGATCCTCCAGTATaGTCACTTTCGGCAAATCTT +
Preference number: 5 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLQDPPV*SLSANL
Trigger: AAGATTTGCCGAAAGTGACAATACTGGAGGATCCTG...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACTGGCATGTCGTACAGTaGCAGATCCTGGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDWHVVQ*QILVPC
Trigger: GCAAGGAACCAGGATCTGCAACTGTACGACATGCCA...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CAA 90 bp TCCTCTCTCCAGCAGGAACACTGTGTGATGCTGATACCTGACCAGGGCCTTTGCGACAAGTTGATATACTaGGCCTCTGTTAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: SSLQQEHCVMLIPDQGLCDKLIY*ASVRRW
Trigger: CCATCTTCTAACAGAGGCCAAGTATATCAACTTGTC...GCAAAGGCCCTGGTCAGGTATCAGCATCACACAGTGTTCCTGCTGGAGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CAA 90 bp GACACAGCTGTTCAGGCACTGCCTCCAGGTCATCCTGGCCAAGAGGCTGATGGTATGTTGACCAGGATATaGATTTCGTTATCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: DTAVQALPPGHPGQEADGMLTRI*ISLSLC
Trigger: ACAGAGAGATAACGAAATCAATATCCTGGTCAACAT...ACCATCAGCCTCTTGGCCAGGATGACCTGGAGGCAGTGCCTGAACAGCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTCTGGGAGATCAGGATaGGCCTTCAGGATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCSGRSG*AFRMPC
Trigger: GCAGGGCATCCTGAAGGCCAATCCTGATCTCCCAGA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp TCCACTGCCTTGCCTGTGGCTGGGACATCCTGCCTGGACCTGTCATGGCCATTTTGTGCCAGTCTGCTATaGCTACAATTAATGCTATAT +
Preference number: 5 (lower is better)
Translates to: STALPVAGTSCLDLSWPFCASLL*LQLMLY
Trigger: ATATAGCATTAATTGTAGCAATAGCAGACTGGCACA...AAATGGCCATGACAGGTCCAGGCAGGATGTCCCAGCCACAGGCAAGGCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACCCACAAGTCCCCTTTTaGCCAAGCTCCACGTCCTTT +
Preference number: 5 (lower is better)
Translates to: THLGSGSSTHELKDRLLNPQVPF*PSSTSF
Trigger: AAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAAGGTGAGGAGGAGCTaGTATTCAAGGAAACACTGC +
Preference number: 5 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVKVRRS*YSRKHC
Trigger: GCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 90 bp GACCATTCATGCTGGGAGTCAGATGTCTGGAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCTGGAGAATTTACCTGCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: DHSCWESDVWRNGFV*SSEFTAGEFTCRLV
Trigger: CACCAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 90 bp ACTCAGCCCCTTCCTGTTTGTAGAAGCCTGAGCAGAGGAGACAGCTaGCTTTGGGAACAGAGAACAAAGGAGCTGAAGATATTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TQPLPVCRSLSRGDS*LWEQRTKELKILLL
Trigger: CAGAAGCAATATCTTCAGCTCCTTTGTTCTCTGTTCCCAAAGTCAGCTGTCTCCTCTGCTCAGGCTTCTACAAACAGGAAGGGGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538893.5
CDS GCA 90 bp ACCAGGGCCTTTGCTGAAACAGATCCTGCCTCACTCATTGGTTTCTaGAGAAGAGAACTCCATCAGAGGAGCTTGGTGCTTTTAATCTGG +
Preference number: 5 (lower is better)
Translates to: TRAFAETDPASLIGF*RRELHQRSLVLLIW
Trigger: CCAGATTAAAAGCACCAAGCTCCTCTGATGGAGTTCTCTTCTGCAGAAACCAATGAGTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS CCA 90 bp TCTTTGCAACTCGCTCTGAACCAGCCAGGTCAACCAGATGGAGTTTaGCATGTCGTACAGTTGCAGATCCTGGTTCCTTGCTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: SLQLALNQPGQPDGV*HVVQLQILVPCLTN
Trigger: ATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp AATCCCACATTTTGGCCTAGAGTGAACTCAGATACTTCTTGTCATCCGTGGCTCATGCTCTGTCTGGCCTaGATGAAGGCGATGATGTCC +
Preference number: 5 (lower is better)
Translates to: NPTFWPRVNSDTSCHPWLMLCLA*MKAMMS
Trigger: GGACATCATCGCCTTCATCAAGGCCAGACAGAGCAT...GAGCCACGGATGACAAGAAGTATCTGAGTTCACTCTAGGCCAAAATGTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCGGAATAAATCCCTTGTaGGTGCTTCCGGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCGINPL*VLPDRG
Trigger: CCCCCTGTCCGGAAGCACCAACAAGGGATTTATTCC...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTATGGAATAAATCCCTaGTTGGTGCTTCCGGACAGG +
Preference number: 5 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEYGINP*LVLPDR
Trigger: CCTGTCCGGAAGCACCAACAAGGGATTTATTCCATA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCAGGATCCTCCAGTATaGTCACTTTCGGCAAATCTT +
Preference number: 5 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVQDPPV*SLSANL
Trigger: AAGATTTGCCGAAAGTGACAATACTGGAGGATCCTG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGGACAAGTTGATATACTaGGCCTCTGTTAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLDKLIY*ASVRRW
Trigger: CCATCTTCTAACAGAGGCCAAGTATATCAACTTGTC...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACGTGTTCCATGGACTCTaGGGGAGGCTTCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: THLGSGSSTHELKDRLLNVFHGL*GRLLES
Trigger: TGATTCTAGAAGCCTCCCCAAGAGTCCATGGAACAC...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGGTGGGAGATCTAATGTaGAAAGACTCTGGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEVGDLM*KDSGRV
Trigger: TACCCTGCCAGAGTCTTTCAACATTAGATCTCCCAC...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTCTTCTTGTCAAGGGATaGGTAGAGCCAGTTGAATTC +
Preference number: 5 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVLLVKG*VEPVEF
Trigger: GAATTCAACTGGCTCTACCAATCCCTTGACAAGAAG...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp GTAACGCTGTCAGCGTGGTCCCTCTTGAAGATTTCAAAAGCCTCCTaGCATCCTAATGACATTTCCTCTCTCATTCCTGTTTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: VTLSAWSLLKISKAS*HPNDISSLIPVWRH
Trigger: GTGTCTCCAAACAGGAATGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR CAA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGATTCTGTAGCTTCACCTaGGCTTTGTCCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGFCSFT*ALSMSS
Trigger: GCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAA...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp GTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTTGACTCAACCAGATGGAGTTaGGCATGTCGTACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: VGTATKSTLAVQFHLNLDSTRWS*ACRTVA
Trigger: TGCAACTGTACGACATGCCAAACTCCATCTGGTTGA...GTCAAGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS-3UTR CAA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGCTTACTATGTTCCATaGAACTGTGAGGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGAYYVP*NCEGQE
Trigger: CTCCTGGCCCTCACAGTTCAATGGAACATAGTAAGC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCCTGATCCCAGGTGGATaGCTGGAAAGTCTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCLIPGG*LESLFK
Trigger: TTTGAAAAGACTTTCCAGCAATCCACCTGGGATCAG...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGGAACTCAGATACTTCTaGTCATCCGTGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWELRYF*SSVAPL
Trigger: CAGTGGAGCCACGGATGACAAGAAGTATCTGAGTTC...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATGTTTTTCCCTGTGGAAGTGGGGAGTGTCAGCCCAAATCCTCCCAAGTGGCTGTTTTTCTGCCTAGATTaGAAACACACACCCATTGCA +
Preference number: 5 (lower is better)
Translates to: MFFPVEVGSVSPNPPKWLFFCLD*KHTPIA
Trigger: TGCAATGGGTGTGTGTTTCAAATCTAGGCAGAAAAA...CAGCCACTTGGGAGGATTTGGGCTGACACTCCCCACTTCCACAGGGAAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TTTCTCCACTCTGGCTGTTGGAAACATGAACTCTTCCCAACACAGTGTTATCTCCCACAAGTCCCCTTTTaGCCAAGCTCCACGTCCTTT +
Preference number: 5 (lower is better)
Translates to: FLHSGCWKHELFPTQCYLPQVPF*PSSTSF
Trigger: AAAGGACGTGGAGCTTGGCAAAAAGGGGACTTGTGG...GAGATAACACTGTGTTGGGAAGAGTTCATGTTTCCAACAGCCAGAGTGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp AAGGGTAGGGACAGCAACAAAATCCACCCTAGCAGTTCAGTTCCACCTGAATCTATCCTGCCTCACTCATaGGTTTCTGCAGAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: KGRDSNKIHPSSSVPPESILPHS*VSAEEN
Trigger: GTTCTCTTCTGCAGAAACCAATGAGTGAGGCAGGAT...AGATTCAGGTGGAACTGAACTGCTAGGGTGGATTTTGTTGCTGTCCCTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS TCA 90 bp ATTTTCCTGGCATTCACATCACAGACATCGAATCTGCCAGTGCCTTaGTCTTGGACTTCCCAGCCTCCAGAACTTTTGTTAGAGAGGAGT +
Preference number: 5 (lower is better)
Translates to: IFLAFTSQTSNLPVP*SWTSQPPELLLERS
Trigger: ACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CCA 90 bp TCATGCAGTTCCCTCCCAAACTGTCTCTTAGGACACTGGTCATCATaGAGTTTCTATAAGGAATGTGCGAACGGTGCTTTTCTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SCSSLPNCLLGHWSS*SFYKECANGAFLKG
Trigger: CCCTTTCAGAAAAGCACCGTTCGCACATTCCTTATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGCAGGTCCCTGTTGCATaGGAGCTCTTAGTATTATGG +
Preference number: 5 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWQVPVA*ELLVLW
Trigger: CCATAATACTAAGAGCTCCAATGCAACAGGGACCTG...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TTTTCAACATCCAACATTCACAGCCAACCTCTCTACACCTGCTCTGCCTCGGAGTATACAATGACTGTTTaGGGAGGTTTCTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: FSTSNIHSQPLYTCSASEYTMTV*GGFSTL
Trigger: CAGAGTGGAGAAACCTCCCAAAACAGTCATTGTATA...CTCCGAGGCAGAGCAGGTGTAGAGAGGTTGGCTGTGAATGTTGGATGTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACAGTCCCCTCCATGGGAATCAAAGTCACTAGTTGCTCCCAGCAGCCCATAGTTAATGGACACCAGACATaGTGGATTCTATATTGTTGG +
Preference number: 5 (lower is better)
Translates to: TVPSMGIKVTSCSQQPIVNGHQT*WILYCW
Trigger: CCAACAATATAGAATCCACAATGTCTGGTGTCCATT...AACTATGGGCTGCTGGGAGCAACTAGTGACTTTGATTCCCATGGAGGGGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp TGTTTCAGAATCTGTTTGTTGTCATCGATGGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCAAAAGCCTCCTGGCATCCTAATGAC +
Preference number: 5 (lower is better)
Translates to: CFRICLLSSMVTLSA*SLLKISKASWHPND
Trigger: GTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACCATCGATGACAACAAACAGATTCTGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS-3UTR CAA 90 bp CAAGGTGAGGAGGAGCTTGTATTCAAGGAAACACTGCTTTTTCCTCCCACATTTCTTACTGGAAACAATTaGACTCCTTTGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QGEEELVFKETLLFPPTFLTGNN*TPLGLA
Trigger: AGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAAG...AAATGTGGGAGGAAAAAGCAGTGTTTCCTTGAATACAAGCTCCTCCTCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp AGCTACATTTTAACTTCCCTCCTCCAACCTCCGTCCACCCTACTTCTTGTCAAGTTAACTCTGAAAAGGTaGCTGCTTCCTCCTATTCCT +
Preference number: 5 (lower is better)
Translates to: SYILTSLLQPPSTLLLVKLTLKR*LLPPIP
Trigger: AGGAATAGGAGGAAGCAGCAACCTTTTCAGAGTTAA...CTTGACAAGAAGTAGGGTGGACGGAGGTTGGAGGAGGGAAGTTAAAATGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACATCTGGGTTCTGGCTCGTCTACTCATGAACTGAAGGACCGTTTACTGAACTTCAAAAACGGTCTCTaGGTTTGCATCCTGATCAAA +
Preference number: 5 (lower is better)
Translates to: THLGSGSSTHELKDRLLNFKNGL*VCILIK
Trigger: TTTGATCAGGATGCAAACCAAGAGACCGTTTTTGAA...GTTCAGTAAACGGTCCTTCAGTTCATGAGTAGACGAGCCAGAACCCAGATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287152.12
CDS-3UTR CAA 90 bp TGTCCTATGATGTTAAGAGTCCATCAAATCAGCATGTTAGCGCAGGTCTGGTGGTGGAGGCTTCATGTCTaGGATCCAAAAGATCATAAC +
Preference number: 5 (lower is better)
Translates to: CPMMLRVHQISMLAQVWWWRLHV*DPKDHN
Trigger: GTTATGATCTTTTGGATCCAAGACATGAAGCCTCCA...CCACCAGACCTGCGCTAACATGCTGATTTGATGGACTCTTAACATCATAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGACAAGTTGATATACTaGGCCTCTGTTAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGDKLIY*ASVRRW
Trigger: CCATCTTCTAACAGAGGCCAAGTATATCAACTTGTC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATCAGAGGAGACTGTATaGTTTTCAAGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVSEETV*FSRIFL
Trigger: CAAGAAGATCCTTGAAAACAATACAGTCTCCTCTGA...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTACTTACTGGAAACAATTaGACTCCTTTGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVLTGNN*TPLGLA
Trigger: AGCCAGCCCCAAAGGAGTCAAATTGTTTCCAGTAAG...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGTGGATTCTATATTGTaGGATGCTGGTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCVDSIL*DAGFFL
Trigger: CAAAAAGAAACCAGCATCCAACAATATAGAATCCAC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACACCAGGAGCAGTGGACCAGCACTTTTATCCAGTTAGCTTCATTTCCAGGTGCGATTGTCTTGCTTACTaGTTTATTGTCCCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TPGAVDQHFYPVSFISRCDCLAY*FIVPLF
Trigger: AAAGAGAGGGACAATAAACAAGTAAGCAAGACAATC...GCACCTGGAAATGAAGCTAACTGGATAAAAGTGCTGGTCCACTGCTCCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTTCAGAATCTGTTTGTaGTCATCGATGGTAACGCTG +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCFRICL*SSMVTL
Trigger: CAGCGTTACCATCGATGACAACAAACAGATTCTGAA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTAATTGCTTCCCAAACATaGCTTCTGCAGAATGCTCTG +
Preference number: 5 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLIASQT*LLQNAL
Trigger: CAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp AGTCATTTAAAGCAGGAGGGTAAATCAGGTCCTTGTTGCTTCATCATGGCTGTAATTGCTTCCCAAACATaGCTTCTGCAGAATGCTCTG +
Preference number: 5 (lower is better)
Translates to: SHLKQEGKSGPCCFIMAVIASQT*LLQNAL
Trigger: CAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT...TACAGCCATGATGAAGCAACAAGGACCTGATTTACCCTCCTGCTTTAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp GCCAATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTAGATTGTCTTGCTTACTaGTTTATTGTCCCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: ANYTILPLCSPPGSSGPVDCLAY*FIVPLF
Trigger: AAAGAGAGGGACAATAAACAAGTAAGCAAGACAATC...TACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp CTAATGACATTTCCTCTCTCATTCCTGTTTGGAGACACAGGGAAATaGCCTCAGTCACAGCATCAGGATCCTATTAATTTCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: LMTFPLSFLFGDTGK*PQSQHQDPINFIVT
Trigger: AGTGACAATGAAATTAATAGGATCCTGATGCTGTGACTGAGGCCATTTCCCTGTGTCTCCAAACAGGAATGAGAGAGGAAATGTCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTGTTTCAGAATCTGTTaGTTGTCATCGATGGTAACG +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCCFRIC*LSSMVT
Trigger: CGTTACCATCGATGACAACAAACAGATTCTGAAACA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
CDS-3UTR CAA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGCAGCCTCCAGAACTTTaGTTAGAGAGGAGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELQPPEL*LERSWD
Trigger: GTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTG...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000287152.12
CDS-3UTR CAA 90 bp CATTCTCAAAAGCTTATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGGTGTTCCATGGACTCTaGGGGAGGCTTCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: HSQKLIKIYTKRHYNSELVFHGL*GRLLES
Trigger: TGATTCTAGAAGCCTCCCCAAGAGTCCATGGAACAC...CAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTATAAGCTTTTGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATAGGAGTGGATTCTATATTGTaGGATGCTGGTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TILPLCSPPGSSGPVFIGVDSIL*DAGFFL
Trigger: CAAAAAGAAACCAGCATCCAACAATATAGAATCCAC...TCCTATAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATAAAGATCTACACAAAACGTCACTACAACAGTGAGCTGAAGCCTTCACCCTGCTTTTTCTGCCTAGATTaGAAACACACACCCATTGCA +
Preference number: 5 (lower is better)
Translates to: IKIYTKRHYNSELKPSPCFFCLD*KHTPIA
Trigger: TGCAATGGGTGTGTGTTTCAAATCTAGGCAGAAAAA...GCAGGGTGAAGGCTTCAGCTCACTGTTGTAGTGACGTTTTGTGTAGATCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp ATTATACTATATTACCACTCTGCTCCCCTCCAGGGTCATCAGGTCCTGTATTTATCAGAGGAGACTGTATaGTTTTCAAGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: IILYYHSAPLQGHQVLYLSEETV*FSRIFL
Trigger: CAAGAAGATCCTTGAAAACAATACAGTCTCCTCTGA...TAAATACAGGACCTGATGACCCTGGAGGGGAGCAGAGTGGTAATATAGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS-3UTR CAA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAAGTTCTTTCCCCTGCCTaGGGTAATTTCTTCACATGC +
Preference number: 5 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAEVLSPA*GNFFTC
Trigger: GCATGTGAAGAAATTACCCAAGGCAGGGGAAAGAAC...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 90 bp AGTAACGATGTCAATGGCACTAGGGAAATAGGAAGAGGACAATTCTaGAAAGTTCCTGCATATGAGTCCTTGAATAAGGAACTTATACTT +
Preference number: 5 (lower is better)
Translates to: SNDVNGTREIGRGQF*KVPAYESLNKELIL
Trigger: AAGTATAAGTTCCTTATTCAAGGACTCATATGCAGGAACTTTCCAGAATTGTCCTCTTCCTATTTCCCTAGTGCCATTGACATCGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465719.1
CDS-3UTR CAA 90 bp TATTTCAAAAATAGGCAAGTTCGGAAGGATAACATGTCAGATAGTGATGCAGAACTTCTTGTCAAGGGATaGGTAGAGCCAGTTGAATTC +
Preference number: 5 (lower is better)
Translates to: YFKNRQVRKDNMSDSDAELLVKG*VEPVEF
Trigger: GAATTCAACTGGCTCTACCAATCCCTTGACAAGAAG...TTCTGCATCACTATCTGACATGTTATCCTTCCGAACTTGCCTATTTTTGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS GCA 72 bp ACACTGGCCTCTTGGGGATGCTGTCTTCCAGTGGGGTaGTGGTGCTGCTCTGTTTCTGGCTGTGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: TLASWGCCLPVG*WCCSVSGCVDW
Trigger: CCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACTGGAAGACAGCATCCCCAAGAGGCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp GGGTGCTGGTGCTGCTCTGTTTCTGGCTGTGTGGACTaGGGCAAGGCGAGGGCAGGATTTTCCTGGCATTCA +
Preference number: 6 (lower is better)
Translates to: GCWCCSVSGCVD*GKARAGFSWHS
Trigger: TGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp TGCTTCCGGACAGGGGGCTTCACCCTCGCGAATATCTaGATAGTCTGCTTCACCATCTCCTCCCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: CFRTGGFTLANI*IVCFTISSLAL
Trigger: CAGAGCCAGGGAGGAGATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000482238.5
ENST00000538893.5
CDS TCA 72 bp GGTTTCCTAGGCGGAAGGGTGGGCTCTGGGACTGTCTaGATTCACGTCTATCCATGCCAGCCAAGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: GFLGGRVGSGTV*IHVYPCQPSGE
Trigger: CTCTCCACTTGGCTGGCATGGATAGACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCGCCTAGGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS CCA 72 bp TCTTCCTCCAGTTGTGATCGCAGCTTCTCCTCCTGCTaGTCTGGCATCAGAGGCACGGCCATGTTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: SSSSCDRSFSSC*SGIRGTAMFSE
Trigger: CTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp CCTTCTTCTGGGTTTCCTAGGCGGAAGGGTGGGCTCTaGGACTGTCTGAATTCACGTCTATCCATGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PSSGFPRRKGGL*DCLNSRLSMPA
Trigger: GGCTGGCATGGATAGACGTGAATTCAGACAGTCCCAGAGCCCACCCTTCCGCCTAGGAAACCCAGAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000458470.5
CDS TCA 72 bp AAGATGGCCCCCTACTCCAGTCTTTGCAACTCGCTCTaGACCAGCCAGGTCAACCAGATGGAGTTTGGCATG +
Preference number: 6 (lower is better)
Translates to: KMAPYSSLCNSL*TSQVNQMEFGM
Trigger: CATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp TTTTCTTCCTCCAGTTGTGATCGCAGCTTCTCCTCCTaGTGGTCTGGCATCAGAGGCACGGCCATGTTTTCC +
Preference number: 6 (lower is better)
Translates to: FSSSSCDRSFSS*WSGIRGTAMFS
Trigger: GGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp TGTCCTTGGGATAATGCCTCTGTCACTGTAACGCTCTaGACCCCCTGTGATAGTGAATGTCTTCCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: CPWDNASVTVTL*TPCDSECLPAA
Trigger: GGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287152.12
ENST00000538893.5
CDS CCA 72 bp CTCGCTCTGAACCAGCCAGGTCAACCAGATGGAGTTTaGCATGTCGTACAGTTGCAGATCCTGGTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: LALNQPGQPDGV*HVVQLQILVPC
Trigger: GCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp TGGCCTCTGTTAGAAGATGGCCCCCTACTCCAGTCTTaGCAACTCGCTCTGAACCAGCCAGGTCAACCAGAT +
Preference number: 6 (lower is better)
Translates to: WPLLEDGPLLQS*QLALNQPGQPD
Trigger: ATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp TTCTGTAGCTTCACCTTGGCTTTGTCCATGAGCAGCTaGAAGTGCTCGATCTCCACCTTCAGGGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: FCSFTLALSMSS*KCSISTFRAFR
Trigger: CCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp ACTCGCTCTGAACCAGCCAGGTCAACCAGATGGAGTTaGGCATGTCGTACAGTTGCAGATCCTGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: TRSEPARSTRWS*ACRTVADPGSL
Trigger: CAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 90 bp TCTGCCCACCAGACTTCAAACTCTTTCTGTAGCTTCACCTTGGCTTaGTCCATGAGCAGCTGCAAGTGCTCGATCTCCACCTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SAHQTSNSFCSFTLA*SMSSCKCSISTFRA
Trigger: AGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 72 bp CAAACTCTTTCTGTAGCTTCACCTTGGCTTTGTCCATaGGCAGCTGCAAGTGCTCGATCTCCACCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: QTLSVASPWLCP*AAASARSPPSG
Trigger: CCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 72 bp ATCCTGAAGACCTTGGGAACTGCAGACTTGCTGGGTTaGTCCAGTTCCTGTAGGACTCCCAGCAACTGGTTT +
Preference number: 6 (lower is better)
Translates to: ILKTLGTADLLG*SSSCRTPSNWF
Trigger: AAACCAGTTGCTGGGAGTCCTACAGGAACTGGATCAACCCAGCAAGTCTGCAGTTCCCAAGGTCTTCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465719.1
CDS GCA 72 bp GGATTTTCCTGGCATTCACATCACAGACATCGAATCTaGCAGTGCCTTGATCTTGGACTTCCCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GFSWHSHHRHRI*QCLDLGLPSLQ
Trigger: CTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGAAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CCA 72 bp TTTGCAACTCGCTCTGAACCAGCCAGGTCAACCAGATaGAGTTTGGCATGTCGTACAGTTGCAGATCCTGGT +
Preference number: 6 (lower is better)
Translates to: FATRSEPARSTR*SLACRTVADPG
Trigger: ACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp GCCCACCAGACTTCAAACTCTTTCTGTAGCTTCACCTaGGCTTTGTCCATGAGCAGCTGCAAGTGCTCGATC +
Preference number: 6 (lower is better)
Translates to: AHQTSNSFCSFT*ALSMSSCKCSI
Trigger: GATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp CCAGGGCCTTTGCTGAAACAGATCCTGCCTCACTCATaGGTTTCTGCAGAAGAGAACTCCATCAGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PGPLLKQILPHS*VSAEENSIRGA
Trigger: AGCTCCTCTGATGGAGTTCTCTTCTGCAGAAACCAATGAGTGAGGCAGGATCTGTTTCAGCAAAGGCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441975.2
CDS CAA 90 bp CCTGGCATTCACATCACAGACATCGAATCTGCCAGTGCCTTGATCTaGGACTTCCCAGCCTCCAGAACTTTTGTTAGAGAGGAGTTGGGA +
Preference number: 6 (lower is better)
Translates to: PGIHITDIESASALI*DFPASRTFVREELG
Trigger: TCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CAA 90 bp GTCTTTGCAACTCGCTCTGAACCAGCCAGGTCAACCAGATGGAGTTaGGCATGTCGTACAGTTGCAGATCCTGGTTCCTTGCTTGACAAA +
Preference number: 6 (lower is better)
Translates to: VFATRSEPARSTRWS*ACRTVADPGSLLDK
Trigger: TTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp TCCTGGCATTCACATCACAGACATCGAATCTGCCAGTaGCTTGATCTTGGACTTCCCAGCCTCCAGAACTTT +
Preference number: 6 (lower is better)
Translates to: SWHSHHRHRICQ*LDLGLPSLQNF
Trigger: AAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CAA 90 bp CAGGGAAATGGCCTCAGTCACAGCATCAGGATCCTATTAATTTCATaGTCACTTCAGTCAGACCACAAAACCAGCCCTGGCTCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: QGNGLSHSIRILLIS*SLQSDHKTSPGSKR
Trigger: CCTCTTGGAGCCAGGGCTGGTTTTGTGGTCTGACTGAAGTGACAATGAAATTAATAGGATCCTGATGCTGTGACTGAGGCCATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS TCA 72 bp TGCTGGGAGTCAGATGTCTGGAGAAATGGCTTCGTGTaGTCGAGTGAATTCACTGCTGGAGAATTTACCTGC +
Preference number: 6 (lower is better)
Translates to: CWESDVWRNGFV*SSEFTAGEFTC
Trigger: GCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp CCAGAACTTTTGTTAGAGAGGAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGGAGAAATGGCTTCGTG +
Preference number: 6 (lower is better)
Translates to: PELLLERSWDHS*WESDVWRNGFV
Trigger: CACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAAAGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CAA 72 bp TTGTCATCGATGGTAACGCTGTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCCTGGCATCCTAATGAC +
Preference number: 6 (lower is better)
Translates to: LSSMVTLSAWSL*KISKASWHPND
Trigger: GTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACCATCGATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp CACATCACAGACATCGAATCTGCCAGTGCCTTGATCTaGGACTTCCCAGCCTCCAGAACTTTTGTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: HITDIESASALI*DFPASRTFVRE
Trigger: CTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CAA 72 bp CCAGGTCAACCAGATGGAGTTTGGCATGTCGTACAGTaGCAGATCCTGGTTCCTTGCTTGACAAATGAATGG +
Preference number: 6 (lower is better)
Translates to: PGQPDGVWHVVQ*QILVPCLTNEW
Trigger: CCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCATCTGGTTGACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 90 bp TTGATCTTGGACTTCCCAGCCTCCAGAACTTTTGTTAGAGAGGAGTaGGGACCATTCATGCTGGGAGTCAGATGTCTGGAGAAATGGCTT +
Preference number: 6 (lower is better)
Translates to: LILDFPASRTFVREE*GPFMLGVRCLEKWL
Trigger: AAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS CAA 90 bp GATTTTCCTGGCATTCACATCACAGACATCGAATCTGCCAGTGCCTaGATCTTGGACTTCCCAGCCTCCAGAACTTTTGTTAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: DFPGIHITDIESASA*ILDFPASRTFVREE
Trigger: CTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS TCA 72 bp GTCAGATGTCTGGAGAAATGGCTTCGTGTGATCGAGTaGATTCACTGCTGGAGAATTTACCTGCAGGTTGGT +
Preference number: 6 (lower is better)
Translates to: VRCLEKWLRVIE*IHCWRIYLQVG
Trigger: ACCAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 72 bp GCATTCACATCACAGACATCGAATCTGCCAGTGCCTTaGTCTTGGACTTCCCAGCCTCCAGAACTTTTGTTA +
Preference number: 6 (lower is better)
Translates to: AFTSQTSNLPVP*SWTSQPPELLL
Trigger: TAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000538893.5
CDS TCA 72 bp CTTCCTGTTTGTAGAAGCCTGAGCAGAGGAGACAGCTaGCTTTGGGAACAGAGAACAAAGGAGCTGAAGATA +
Preference number: 6 (lower is better)
Translates to: LPVCRSLSRGDS*LWEQRTKELKI
Trigger: TATCTTCAGCTCCTTTGTTCTCTGTTCCCAAAGTCAGCTGTCTCCTCTGCTCAGGCTTCTACAAACAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538893.5
CDS GCA 72 bp ACATCACTTTTGTTAGAGAGGAGTTGGGACCATTCATaGTGGGAGTCAGATGTCTGGAGAAATGGCTTCGTG +
Preference number: 6 (lower is better)
Translates to: TSLLLERSWDHS*WESDVWRNGFV
Trigger: CACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAATGGTCCCAACTCCTCTCTAACAAAAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394362.5
ENST00000458470.5
CDS CCA 72 bp ATCTGTTTGTTGTCATCGATGGTAACGCTGTCAGCGTaGTCCCTCTTGAAGATTTCAAAAGCCTCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: ICLLSSMVTLSA*SLLKISKASWH
Trigger: ATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACCATCGATGACAACAAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp AGTGACAAGTTGATATACTTGGCCTCTGTTAGAAGATaGCCCCCTACTCCAGTCTTTGCAACTCGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: SDKLIYLASVRR*PPTPVFATRSE
Trigger: TTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGTATATCAACTTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 90 bp ATCTGTTTGTTGTCATCGATGGTAACGCTGTCAGCGTGGTCCCTCTaGAAGATTTCAAAAGCCTCCTGGCATCCTAATGACATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: ICLLSSMVTLSAWSL*KISKASWHPNDISS
Trigger: AGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTACCATCGATGACAACAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS TCA 72 bp TTGCAGATCCTGGTTCCTTGCTTGACAAATGAATGGTaGAAATGCAGTGGGAACGGGTTGAAGCTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: LQILVPCLTNEW*KCSGNGLKLGS
Trigger: TGAACCAAGCTTCAACCCGTTCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp TCCCTCCCAAACTGTCTCTTAGGACACTGGTCATCATaGAGTTTCTATAAGGAATGTGCGAACGGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: SLPNCLLGHWSS*SFYKECANGAF
Trigger: AAAAGCACCGTTCGCACATTCCTTATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp TCATGCAGTTCCCTCCCAAACTGTCTCTTAGGACACTaGTCATCATGGAGTTTCTATAAGGAATGTGCGAAC +
Preference number: 6 (lower is better)
Translates to: SCSSLPNCLLGH*SSWSFYKECAN
Trigger: GTTCGCACATTCCTTATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp GTTGATCCAGTTCCTGTAGGACTCCCAGCAACTGGTTaGGCAATGTTTTCAAAAACGGTCTCTTGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: VDPVPVGLPATG*AMFSKTVSWFA
Trigger: TGCAAACCAAGAGACCGTTTTTGAAAACATTGCCAAACCAGTTGCTGGGAGTCCTACAGGAACTGGATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465719.1
CDS TCA 72 bp AGATTCCTAGGGCTACTTGCTGTATATGCCGCTGGGTaGTTTCTTCCTTCAGGTGACCAATTTTACTTCTTG +
Preference number: 6 (lower is better)
Translates to: RFLGLLAVYAAG*FLPSGDQFYFL
Trigger: CAAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCAAGTAGCCCTAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229913.9
ENST00000287152.12
ENST00000394362.5
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp TTTCCTCTCTCATTCCTGTTTGGAGACACAGGGAAATaGCCTCAGTCACAGCATCAGGATCCTATTAATTTC +
Preference number: 6 (lower is better)
Translates to: FPLSFLFGDTGK*PQSQHQDPINF
Trigger: GAAATTAATAGGATCCTGATGCTGTGACTGAGGCCATTTCCCTGTGTCTCCAAACAGGAATGAGAGAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229913.9
ENST00000394362.5
CDS GCA 72 bp AGACTCATCAAGATTCCTTTTCTCCAAGGAGAGTGTTaGAATCATAGTTGTCATGCAGTTCCCTCCCAAACT +
Preference number: 6 (lower is better)
Translates to: RLIKIPFLQGEC*NHSCHAVPSQT
Trigger: AGTTTGGGAGGGAACTGCATGACAACTATGATTGCAACACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287152.12
ENST00000441975.2
ENST00000458470.5
ENST00000538893.5
CDS CCA 72 bp CCTCCAGTATTGTCACTTTCGGCAAATCTTCCAAACTaGAGGCTTCATGTCTTGGATCCAAAAGATCATAAC +
Preference number: 6 (lower is better)
Translates to: PPVLSLSANLPN*RLHVLDPKDHN
Trigger: GTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGACAATACTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000458470.5
ENST00000538893.5
CDS CAA 72 bp CTTTCGGCAAATCTTCCAAACTGGAGGCTTCATGTCTaGGATCCAAAAGATCATAACCACATTCATTGTAGA +
Preference number: 6 (lower is better)
Translates to: LSANLPNWRLHV*DPKDHNHIHCR
Trigger: TCTACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000458470.5
ENST00000538893.5
CDS CAA 90 bp GTATTGTCACTTTCGGCAAATCTTCCAAACTGGAGGCTTCATGTCTaGGATCCAAAAGATCATAACCACATTCATTGTAGATTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: VLSLSANLPNWRLHV*DPKDHNHIHCRFPN
Trigger: ATTTGGAAATCTACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGACAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000458470.5
ENST00000538893.5
CDS GCA 72 bp CTTCTTCTTTTAATGGTTCTTGACAATCTTGGTCTTTaGTTTCAGAGGAGACTGTATTGTTTTCAAGGATCT +
Preference number: 6 (lower is better)
Translates to: LLLLMVLDNLGL*FQRRLYCFQGS
Trigger: AGATCCTTGAAAACAATACAGTCTCCTCTGAAAGCAAAGACCAAGATTGTCAAGAACCATTAAAAGAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287152.12
ENST00000458470.5
ENST00000538893.5