RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF5A (Homo sapiens)

Ensembl gene IDs: ENSG00000155980

Ensembl transcript IDs: ENST00000286452.5, ENST00000455537.7, ENST00000552227.1, ENST00000674619.1, ENST00000674653.1, ENST00000674776.1, ENST00000674858.1, ENST00000674980.1, ENST00000675023.1, ENST00000675201.1, ENST00000675216.1, ENST00000675299.1, ENST00000675397.1, ENST00000675433.1, ENST00000675629.1, ENST00000675697.1, ENST00000675737.1, ENST00000675866.1, ENST00000675882.1, ENST00000675907.1, ENST00000675929.1, ENST00000675984.1, ENST00000676081.1, ENST00000676242.1, ENST00000676250.1, ENST00000676265.1, ENST00000676352.1, ENST00000676359.1, ENST00000676437.1, ENST00000676457.1

Found 1375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTaGCCTGGTCCTCAGCCTCATAGCCACACGGCAGGTCACTCCTGG +
Preference number: 1 (lower is better)
Translates to: WEISWLLSLGGEGKA*PGPQPHSHTAGHSW
Trigger: CCAGGAGTGACCTGCCGTGTGGCTATGAGGCTGAGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 90 bp CGAGGAAGCAGCCTGACGCTACCTGAAAGTGCAGGTATGCAGCCGTaGGTGTGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGA +
Preference number: 1 (lower is better)
Translates to: RGSSLTLPESAGMQP*VWEISWLLSLGGEG
Trigger: TCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGTAGCGTCAGGCTGCTTCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp CTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCTCAGC +
Preference number: 1 (lower is better)
Translates to: LKVQVCSRGCGRLAG*CLLVEREKLGLVLS
Trigger: GCTGAGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 90 bp GCCCACAGGAACCTTCCTTCCACCCTAGTGGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGC +
Preference number: 1 (lower is better)
Translates to: AHRNLPSTLVGLETA*LVYPTVALFSMSCS
Trigger: GCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACCCACTAGGGTGGAAGGAAGGTTCCTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR CCA 90 bp TGGTTTGTCTTCCACGCTGGCATGCAACATTTTGGCAGATGTGAGTaGGCAGGCCAGGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGG +
Preference number: 1 (lower is better)
Translates to: WFVFHAGMQHFGRCE*AGQVPLAVTLALKG
Trigger: CCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR TCA 90 bp GCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATAGGCTGCCCTGCCGCTGGAGAATCT +
Preference number: 1 (lower is better)
Translates to: AACAYQLAFPLSFLS*LRSWVIGCPAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR TCA 90 bp GCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: AKRSSAGKGSRASFP*RSHGPVQPALTSWH
Trigger: ATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 90 bp GTAAAGGGAGCAGGGCCTCTTTTCCTTGAAGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTC +
Preference number: 1 (lower is better)
Translates to: VKGAGPLFLEGVMGQ*SLRLPAGIPTQLPF
Trigger: GAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTGCTCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR CCA 90 bp CTACCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCT +
Preference number: 1 (lower is better)
Translates to: LPESAGMQPWVWEIS*LLSLGGEGKAWPGP
Trigger: AGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 90 bp AGCAGCCTGACGCTACCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCT +
Preference number: 1 (lower is better)
Translates to: SSLTLPESAGMQPWV*EISWLLSLGGEGKA
Trigger: AGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGTAGCGTCAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 90 bp CACACAAGAACAAAGAAGGTTCCTGTGCTGCTAGAGGAGAGCACCTaGGGACAGAGGAGGAAAAAGAGGGGCTTTGCCACCTCCACTGAG +
Preference number: 1 (lower is better)
Translates to: HTRTKKVPVLLEEST*GQRRKKRGFATSTE
Trigger: CTCAGTGGAGGTGGCAAAGCCCCTCTTTTTCCTCCTCTGTCCCCAGGTGCTCTCCTCTAGCAGCACAGGAACCTTCTTTGTTCTTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp CTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTaGGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCC +
Preference number: 1 (lower is better)
Translates to: LLKALCVCMRVCMFV*VRACVYEGSQPSSS
Trigger: GGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 90 bp ATGAGCTGGAAGCCCCCAAACCAAGGGGTGGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCA +
Preference number: 1 (lower is better)
Translates to: MSWKPPNQGVEMGGA*RPVWNKKEIQLITS
Trigger: TGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGGGGCTTCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 90 bp CTGGTTTACTATTCTGGGAAACCCCTGGAGAGGGCTCAGCTTAGATaGAGCCCAGTAAGAGACTGGCCATGTTCTCTGTGCCACTTCTGG +
Preference number: 1 (lower is better)
Translates to: LVYYSGKPLERAQLR*SPVRDWPCSLCHFW
Trigger: CCAGAAGTGGCACAGAGAACATGGCCAGTCTCTTACTGGGCTGCATCTAAGCTGAGCCCTCTCCAGGGGTTTCCCAGAATAGTAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR TCA 90 bp CTAAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGACCCCTCAGGGTCAAGCCTTAGAGCT +
Preference number: 1 (lower is better)
Translates to: LKQQSSSVWRVLHMG*EWLGEDPSGSSLRA
Trigger: AGCTCTAAGGCTTGACCCTGAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 90 bp TTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTGCGTaGGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATT +
Preference number: 1 (lower is better)
Translates to: LRLCVCACVCACLCA*VRVCMKGHNPLAPI
Trigger: AATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCACACAAACATGCACACACGCATGCACACACACAAAGCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 90 bp CCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCACCTTAGCACCATGTGGAAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: PDFLSWFGMASDLHP*SYLENHLSTMWKER
Trigger: CCTTTCCTTCCACATGGTGCTAAGGTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR TCA 90 bp GGTGGCATATACAGATGGGAAGAGGATGGGACACAGGTGCAGGCGTaGAGCAAACATCGCCTTAACTGGAGATGTCTTAGTTCCAAAAAC +
Preference number: 1 (lower is better)
Translates to: GGIYRWEEDGTQVQA*SKHRLNWRCLSSKN
Trigger: GTTTTTGGAACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTGTATATGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp AGCTTACTGGTGGCATATACAGATGGGAAGAGGATGGGACACAGGTaGAGGCGTGAAGCAAACATCGCCTTAACTGGAGATGTCTTAGTT +
Preference number: 1 (lower is better)
Translates to: SLLVAYTDGKRMGHR*RREANIALTGDVLV
Trigger: AACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTGTATATGCCACCAGTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp CAACTCCTCTTCTGCATTCCTACTTCTCTGCTTCTCAGACTTTTCTaGCTGTGTGTGCCTGGTTTACTATTCTGGGAAACCCCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: QLLFCIPTSLLLRLF*LCVPGLLFWETPGE
Trigger: CTCTCCAGGGGTTTCCCAGAATAGTAAACCAGGCACACACAGGCAGAAAAGTCTGAGAAGCAGAGAAGTAGGAATGCAGAAGAGGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 90 bp GCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACAGAATCCTCAGGGTCTCTTAGGACT +
Preference number: 1 (lower is better)
Translates to: ALVQRSQIGPPSSEQ*FSNYSTESSGSLRT
Trigger: AGTCCTAAGAGACCCTGAGGATTCTGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR CCA 90 bp CATTCCTACTTCTCTGCTTCTCAGACTTTTCTGCCTGTGTGTGCCTaGTTTACTATTCTGGGAAACCCCTGGAGAGGGCTCAGCTTAGAT +
Preference number: 1 (lower is better)
Translates to: HSYFSASQTFLPVCA*FTILGNPWRGLSLD
Trigger: ATCTAAGCTGAGCCCTCTCCAGGGGTTTCCCAGAATAGTAAACCAGGCACACACAGGCAGAAAAGTCTGAGAAGCAGAGAAGTAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp CATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATaGGTGTGTGCATGTTTGTGTGCGTGCGTGCGTGTGTGTATGAAG +
Preference number: 1 (lower is better)
Translates to: HDAKTFFCLRLCVCA*VCACLCACVRVCMK
Trigger: CTTCATACACACACGCACGCACGCACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR CCA 90 bp CCCACCATGATCAGCTCCATAGAAATTAAAGTATTCCTGTCATCATaGTTACTCTGCTCTGAGAGTGTCCCTGTGAGATCACAAACGGCA +
Preference number: 1 (lower is better)
Translates to: PTMISSIEIKVFLSS*LLCSESVPVRSQTA
Trigger: TGCCGTTTGTGATCTCACAGGGACACTCTCAGAGCAGAGTAACCATGATGACAGGAATACTTTAATTTCTATGGAGCTGATCATGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR TCA 90 bp AAGTATTCCTGTCATCATGGTTACTCTGCTCTGAGAGTGTCCCTGTaGGATCACAAACGGCAGGGACTATTTGTGTTTTACAGGAATACA +
Preference number: 1 (lower is better)
Translates to: KYSCHHGYSALRVSL*DHKRQGLFVFYRNT
Trigger: TGTATTCCTGTAAAACACAAATAGTCCCTGCCGTTTGTGATCTCACAGGGACACTCTCAGAGCAGAGTAACCATGATGACAGGAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 90 bp GAGGAAGAGTCTATTTCTCTGTCTCATGATGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGT +
Preference number: 1 (lower is better)
Translates to: EEESISLSHDAKTFF*LRLCVCACVCACLC
Trigger: ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAATAGACTCTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp AGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGAATGGCATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: RMLGSGQAGRVWQSGQNGMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...GCCATTCTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR-3UTR CCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSPLTGC*EQSASS
Trigger: GGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: HGPVQPALTSWHSHSASFQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GGAGCGLQVEILVVLEEAGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...AGCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR-3UTR TCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTT +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSGLETA*LVYPTV
Trigger: AACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp AGGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 2 (lower is better)
Translates to: RWSWVWPAGRDSGSSGRGGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...GCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAGGGAAGCAACCTaGGGCTGGTCCGAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQERREAT*GWSEEA
Trigger: TGCTTCCTCGGACCAGCCTCAGGTTGCTTCCCTTCT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR GCA 90 bp AGGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCCTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 2 (lower is better)
Translates to: RWSWVWPAGRDSGSSGRGLGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...GCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 2 (lower is better)
Translates to: HGPVQPALTSWHSHSASFERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: HGPVQPALTSWHSHSASFQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCCAAGCTCACTTCTTTaGACATGTGACAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSPSSLL*TCDSDP
Trigger: GGGGTCACTGTCACATGTCCAAAGAAGTGAGCTTGG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAG +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSLPSFP*VAALVQ
Trigger: CTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTTCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: CSSRVLRSSASRSQPEASSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...AGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
3UTR-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCTCCGAGGAAGCAGCCTaGCGCTACCTGAAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSSEEAA*RYLKVQ
Trigger: CTGCACTTTCAGGTAGCGTCAGGCTGCTTCCTCGGA...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR GCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: SLKESWASAACAYQLAFPLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: HGPVQPALTSWHSHSASFLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 2 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCATCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 2 (lower is better)
Translates to: SLKESWASAACAYQLAFPSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp CAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCCGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: QVEILVVLEEAVGVTDALRSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...GAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAATCTCTACCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR-3UTR CCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACACTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: APCGRKGPSETKTTVLFSTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACAATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 2 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 2 (lower is better)
Translates to: WASAACAYQLAFPLSFLSPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp ACACACAAGAACAAAGAAGGTTCCTGTGCTGCTAGAGGAGAGCACCTGGGGACAGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: THKNKEGSCAARGEHLGTVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...TGTCCCCAGGTGCTCTCCTCTAGCAGCACAGGAACCTTCTTTGTTCTTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCATCTGCACACACTTTaGTTTACTGTCCTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTHLHTL*FTVLFL
Trigger: AAGGAACAGGACAGTAAACCAAAGTGTGTGCAGATG...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 2 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 2 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 2 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 2 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: APCGRKGPSETKTTVLFSGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 2 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR CAA 90 bp AGACTGGCCATGTTCTCTGTGCCACTTCTGGGCCCTAAAGCAACCTaGGTGAGAAACCCAGTGACACACAAGAACAAAGAAGGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: RLAMFSVPLLGPKAT*VRNPVTHKNKEGSC
Trigger: ACAGGAACCTTCTTTGTTCTTGTGTGTCACTGGGTTTCTCACCAAGGTTGCTTTAGGGCCCAGAAGTGGCACAGAGAACATGGCCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTAAGGTGAGGGGTGTATaGAGAAAATTATATGTCTCA +
Preference number: 2 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTKVRGV*RKLYVS
Trigger: TGAGACATATAATTTTCTTCATACACCCCTCACCTT...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 2 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: LVYPTVALFSMSCSFSAELQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 2 (lower is better)
Translates to: LVYPTVALFSMSCSFSAESDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 2 (lower is better)
Translates to: APAAWCSSRVLRSSASRSSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...ACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
3UTR-3UTR GCA 90 bp GTCTACCACCCCTGTGGTTCTAATCTACAGCGGCCAAGCTCACTTCTTTGGACATCATCATGGTTACTCTaGTCTGAGAGTGTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: VYHPCGSNLQRPSSLLWTSSWLL*SESVPV
Trigger: CACAGGGACACTCTCAGAGCAGAGTAACCATGATGA...TGTCCAAAGAAGTGAGCTTGGCCGCTGTAGATTAGAACCACAGGGGTGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTTCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 2 (lower is better)
Translates to: YTQGVAQFGLSSTLACNISGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 2 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 2 (lower is better)
Translates to: VSSLSSSALHPHISLCVFSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCCTGCCTGTGTGTGCCTaGTTTACTATTCTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSLPVCA*FTILGN
Trigger: GTTTCCCAGAATAGTAAACCAGGCACACACAGGCAG...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CAA 90 bp CTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LCTPSKYTQGVAQFG*SSTLACNILADVSG
Trigger: CCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
3UTR-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATCTGGGTTCTGGTCATaGGCTCTGGGGCAGGGAATA +
Preference number: 2 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSSGFWS*ALGQGI
Trigger: TATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp GCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTTCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: APAAWCSSRVLRSSASRSSNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...ACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
3UTR-3UTR TCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCAGCCTGACGCTACCTaGAAGTGCAGGTATGCAGCC +
Preference number: 2 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSQPDAT*KCRYAA
Trigger: GGCTGCATACCTGCACTTTCAGGTAGCGTCAGGCTG...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTACACAGGTGCAGGCGTaGAGCAAACATCGCCTTAAC +
Preference number: 2 (lower is better)
Translates to: APCGRKGPSETKTTVLFSTQVQA*SKHRLN
Trigger: GTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR GCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 2 (lower is better)
Translates to: VSSLSSSALHPHISLCVFEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
3UTR-3UTR GCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: YTQGVAQFGLSSTLACNILFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHPLTGC*EQSASS
Trigger: GGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGG...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTAACGTCCAGATTACATaGGGCAGCACAGGTGTAGCC +
Preference number: 2 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLNVQIT*GSTGVA
Trigger: GGCTACACCTGTGCTGCCCCATGTAATCTGGACGTT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAGGAATCAATCATTTTaGCTACACCTGCCTGTAACC +
Preference number: 2 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACRNQSF*LHLPVT
Trigger: GGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCT...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CAGCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTATCTGATTTAGGTCTTTaGGCTCATCAATGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: QLLQLGALLVFFALQLLVSDLGL*AHQWSS
Trigger: AGAAGACCATTGATGAGCTCAAAGACCTAAATCAGA...TACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
3UTR-3UTR TCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCTGAGAGTGTCCCTGTaGGATCACAAACGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSLRVSL*DHKRQG
Trigger: TCCCTGCCGTTTGTGATCTCACAGGGACACTCTCAG...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
3UTR-3UTR CCA 90 bp CTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCTTCTTCTTTCTCCCATaGCATCTGAAGGTTCTCAAA +
Preference number: 2 (lower is better)
Translates to: LLQLGALLVFFALQLLVVFFFLP*HLKVLK
Trigger: TTTGAGAACCTTCAGATGCCATGGGAGAAAGAAGAA...GACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
3UTR CAA 90 bp AAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTaGACTACACCTGCCTGTAACCATCTCCATGGACAGATGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KFPSLFTPKPKESII*TTPACNHLHGQMSS
Trigger: GCTGCTCATCTGTCCATGGAGATGGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 2 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: IKPPGFLSALLTANISLSISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 2 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 2 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp ACACACAAGAACAAAGAAGGTTCCTGTGCTGCTAGAGGAGAGCACCTGGGGACATTTCCTAAAGCTTACTaGTGGCATATACAGATGGGA +
Preference number: 2 (lower is better)
Translates to: THKNKEGSCAARGEHLGTFPKAY*WHIQMG
Trigger: TCCCATCTGTATATGCCACCAGTAAGCTTTAGGAAA...TGTCCCCAGGTGCTCTCCTCTAGCAGCACAGGAACCTTCTTTGTTCTTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
3UTR-3UTR CCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 2 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 2 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR GCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
3UTR-3UTR GCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLSDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
3UTR-3UTR CCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 2 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: VSSLSSSALHPHISLCVFYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: TFFCLRLCVCACVCACLCYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTCCTAAAGCTTACTGGTaGCATATACAGATGGGAAGA +
Preference number: 2 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLPKAYW*HIQMGR
Trigger: TCTTCCCATCTGTATATGCCACCAGTAAGCTTTAGG...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 2 (lower is better)
Translates to: APCGRKGPSETKTTVLFSCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 2 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTATGGTTACTCTGCTCTaGGAGTGTCCCTGTGAGATC +
Preference number: 2 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCMVTLL*ECPCEI
Trigger: GATCTCACAGGGACACTCTCAGAGCAGAGTAACCAT...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR GCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
3UTR-3UTR CCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 2 (lower is better)
Translates to: TFFCLRLCVCACVCACLCEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp AGAACAGGAACAGGTGGCATCTGCACACACTTTGGTTTACTGTCCTGTTCCTTTATTTTAAATCAGCTCTaGGTTCTGGTCATGAGCTCT +
Preference number: 2 (lower is better)
Translates to: RTGTGGICTHFGLLSCSFILNQL*VLVMSS
Trigger: AGAGCTCATGACCAGAACCCAGAGCTGATTTAAAAT...AAAGGAACAGGACAGTAAACCAAAGTGTGTGCAGATGCCACCTGTTCCTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTTTAAATCAGCTCTaGGTTCTGGTCATGAGCTCT +
Preference number: 2 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNILNQL*VLVMSS
Trigger: AGAGCTCATGACCAGAACCCAGAGCTGATTTAAAAT...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR CCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATTTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR TCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR TCA 72 bp CCTGAGGCTGGTCCGAGGAAGCAGCCTGACGCTACCTaGAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: PEAGPRKQPDAT*KCRYAAVGVGD
Trigger: ATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGTAGCGTCAGGCTGCTTCCTCGGACCAGCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 72 bp GCAGGGCCTCTTTTCCTTGAAGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCTGGCATTCCCACTCAG +
Preference number: 3 (lower is better)
Translates to: AGPLFLEGVMGQ*SLRLPAGIPTQ
Trigger: CTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGGCCCTAAAGCAACCTaGGTGAGAAACCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: WASAACAYQLAFPLSFLSGPKAT*VRNPVT
Trigger: TGTCACTGGGTTTCTCACCAAGGTTGCTTTAGGGCC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 72 bp CAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: QVCSRGCGRLAG*CLLVEREKLGL
Trigger: CAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR TCA 72 bp CAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGACCCCTCAGGGTCAAGC +
Preference number: 3 (lower is better)
Translates to: QSSSVWRVLHMG*EWLGEDPSGSS
Trigger: GCTTGACCCTGAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 72 bp GGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATaGAACATTTTGGCAGATGTGAGTGGGCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GVAQFGLSSTLA*NILADVSGQAR
Trigger: CCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR CCA 72 bp ACGCTACCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: TLPESAGMQPWV*EISWLLSLGGE
Trigger: CTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGTAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CAA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 3 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp CAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCTGCTGGTACCGGCGCTaGTCCTTCATGGCGCCCTCC +
Preference number: 3 (lower is better)
Translates to: QVEILVVLEEAVGVTDALCWYRR*SFMAPS
Trigger: GGAGGGCGCCATGAAGGACAAGCGCCGGTACCAGCA...GAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAATCTCTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
3UTR GCA 72 bp CTCTTTTCCTTGAAGGAGTCATGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTCCCACTCAGCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LFSLKESWASAA*AYQLAFPLSFL
Trigger: AAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGAAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 72 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCC +
Preference number: 3 (lower is better)
Translates to: LVYPTVALFSMS*SFSAEEPDWTP
Trigger: GGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 3 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQETFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 72 bp TATTCTGGGAAACCCCTGGAGAGGGCTCAGCTTAGATaGAGCCCAGTAAGAGACTGGCCATGTTCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: YSGKPLERAQLR*SPVRDWPCSLC
Trigger: GCACAGAGAACATGGCCAGTCTCTTACTGGGCTGCATCTAAGCTGAGCCCTCTCCAGGGGTTTCCCAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CAA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCAACGGCAGGGACTATTaGTGTTTTACAGGAATACAG +
Preference number: 3 (lower is better)
Translates to: ESWASAACAYQLAFPLSFNGRDY*CFTGIQ
Trigger: CTGTATTCCTGTAAAACACAAATAGTCCCTGCCGTT...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR TCA 72 bp CATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGA +
Preference number: 3 (lower is better)
Translates to: HGLSTPPLPSFP*VAALVQRSQIG
Trigger: TCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 3 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPLLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 3 (lower is better)
Translates to: WASAACAYQLAFPLSFLSKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 3 (lower is better)
Translates to: YTQGVAQFGLSSTLACNICRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCGCTCATCACTTCAACTaGAGGGCACTGAAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFAHHFN*RALKVQ
Trigger: CTGCACTTTCAGTGCCCTCAAGTTGAAGTGATGAGC...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674980.1
3UTR TCA 72 bp ACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTTTCTTTAAAGTGCACT +
Preference number: 3 (lower is better)
Translates to: TPQGQALELPTS*KSTLPLSLKCT
Trigger: AGTGCACTTTAAAGAAAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR GCA 72 bp GTGGCATATACAGATGGGAAGAGGATGGGACACAGGTaGAGGCGTGAAGCAAACATCGCCTTAACTGGAGAT +
Preference number: 3 (lower is better)
Translates to: VAYTDGKRMGHR*RREANIALTGD
Trigger: ATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTGTATATGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 72 bp AAAGCTTACTGGTGGCATATACAGATGGGAAGAGGATaGGACACAGGTGCAGGCGTGAAGCAAACATCGCCT +
Preference number: 3 (lower is better)
Translates to: KAYWWHIQMGRG*DTGAGVKQTSP
Trigger: AGGCGATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTGTATATGCCACCAGTAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 72 bp GCCCAGCTTGTAGCTCAGTCACAGAACAGGAACAGGTaGCATCTGCACACACTTTGGTTTACTGTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: AQLVAQSQNRNR*HLHTLWFTVLF
Trigger: GAACAGGACAGTAAACCAAAGTGTGTGCAGATGCCACCTGTTCCTGTTCTGTGACTGAGCTACAAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CAA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR TCA 72 bp TACAGATGGGAAGAGGATGGGACACAGGTGCAGGCGTaGAGCAAACATCGCCTTAACTGGAGATGTCTTAGT +
Preference number: 3 (lower is better)
Translates to: YRWEEDGTQVQA*SKHRLNWRCLS
Trigger: ACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR GCA 72 bp AAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATaGGTGTGTGCATGTTTGTGTGCGTGCGTGCGTGTG +
Preference number: 3 (lower is better)
Translates to: KTFFCLRLCVCA*VCACLCACVRV
Trigger: CACACGCACGCACGCACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR CCA 72 bp TCTCCATGGACAGATGAGCAGCCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCCATTTTTCAAAATATT +
Preference number: 3 (lower is better)
Translates to: SPWTDEQPLTGC*EQSASSIFQNI
Trigger: AATATTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR CCA 72 bp AAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGACCTCCATCCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: KRLDIRTPDFLS*FGMASDLHPCS
Trigger: ACTGCAGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCACTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 3 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSLLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR-3UTR CAA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 3 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR TCA 72 bp TGTCATCATGGTTACTCTGCTCTGAGAGTGTCCCTGTaGGATCACAAACGGCAGGGACTATTTGTGTTTTAC +
Preference number: 3 (lower is better)
Translates to: CHHGYSALRVSL*DHKRQGLFVFY
Trigger: GTAAAACACAAATAGTCCCTGCCGTTTGTGATCTCACAGGGACACTCTCAGAGCAGAGTAACCATGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CCA 72 bp TATTTTAAATCAGCTCTGGGTTCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAGGAGCTTGAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: YFKSALGSGHEL*GREYQKELEEK
Trigger: TTTTTCTTCAAGCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATTTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR CCA 72 bp ATCAGCTCCATAGAAATTAAAGTATTCCTGTCATCATaGTTACTCTGCTCTGAGAGTGTCCCTGTGAGATCA +
Preference number: 3 (lower is better)
Translates to: ISSIEIKVFLSS*LLCSESVPVRS
Trigger: TGATCTCACAGGGACACTCTCAGAGCAGAGTAACCATGATGACAGGAATACTTTAATTTCTATGGAGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR-3UTR CAA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 3 (lower is better)
Translates to: IKPPGFLSALLTANISLSKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFPAAAG*GRPGRL
Trigger: CAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGG...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp TGGGTGAGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WVRMLGSGQAGRVWQSGQMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...CTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCTCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp TGGGTGAGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WVRMLGSGQAGRVWQSGQGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...CTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCTCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR TCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCGGCTGTTGGTGTAACTaGTGCACTCAGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSGCWCN*CTQGSG
Trigger: CCCGGAGCCCTGAGTGCATCAGTTACACCAACAGCC...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGTGAGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGCTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: WVRMLGSGQAGRVWQSGQLGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...CTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCTCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAGGGATGCGGGCGACCTaGGCGTCTGGTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEGMRAT*ASGPFG
Trigger: CCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCC...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGGCGCTGTCTCTCTCCTaGGGCAGCGGGATGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKALSLS*GSGMRA
Trigger: CGCCCGCATCCCGCTGCCGCAGGAGAGAGACAGCGC...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGTCCTCCTCGTATTTCTaGCGCTCCTCGGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLSSSYF*RSSGAM
Trigger: CATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGA...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGAGGTTCTCCAGCTaGCGGCACCGCTTGACCACA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSWRFSS*RHRLTT
Trigger: TGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCACTCCAGGGACAGCATaGTGGCCACCTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSTPGTA*WPPSET
Trigger: TGTCTCAGAAGGTGGCCACCATGCTGTCCCTGGAGT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKEELAG*ELPPGH
Trigger: GTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTC...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CAGCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLLQLGALLVFFALQLLVEELAG*ELPPGH
Trigger: GTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTC...TACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAGAAGGGAAGCAACCTaGGGCTGGTCCGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSRREAT*GWSEEA
Trigger: TGCTTCCTCGGACCAGCCTCAGGTTGCTTCCCTTCT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTEAEDR*SVSGDR
Trigger: TCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTC...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPTSCSR*NSDSRD
Trigger: GTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCATGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPWASAA*AYQLAF
Trigger: GAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTAGGCCAGGTGCCCCTTaGAGTGACCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFRPGAP*SDPGSE
Trigger: TTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSWLSSR*TFSLSP
Trigger: AGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCTCATCCACCAGAAGCTaGTTCTGCTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSSSTRS*FCWLFS
Trigger: GGAGAAGAGCCAGCAGAACCAGCTTCTGGTGGATGA...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGAATGGCACGGGTTTGGCAATCTaGGCAGAATGGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: RMLGSGQAGRVWQSGQNGTGLAI*AEWPRL
Trigger: CAAACGGGGCCATTCTGCCCAGATTGCCAAACCCGT...GCCATTCTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGAATGGCAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: RMLGSGQAGRVWQSGQNGRWSWV*PAGRDS
Trigger: AGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT...GCCATTCTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCTGCTCCAGTCTTGCTaGCCTTCTCACTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTLLQSC*PSHSLP
Trigger: TGGCAGGGAGTGAGAAGGTCAGCAAGACTGGAGCAG...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCAGAGTCGGGCCACAGTaGACTCCTCCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLRVGPQ*TPPRWP
Trigger: GGGCCATCGAGGAGGAGTTCACTGTGGCCCGACTCT...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFEELAG*ELPPGH
Trigger: GTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTC...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGCCTCATGCTGAGAGATaGGGAGCTGGCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLPHAER*GAGRMR
Trigger: TCTCATCCTGCCAGCTCCTCATCTCTCAGCATGAGG...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTACATTTTGGCAGATGTaGGTGGGCAGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFTFWQM*VGRPGA
Trigger: GGCACCTGGCCTGCCCACTCACATCTGCCAAAATGT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCPAAAG*GRPGRL
Trigger: CAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDPAAAG*GRPGRL
Trigger: CAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGG...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCCGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSRFLSS*TDRFVL
Trigger: CAAGACAAATCTGTCCGTGCACGAGGACAAGAACCG...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGACCTTCTCACTCCCTaGCAGGTCCACCAGATACAG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSDLLTP*QVHQIQ
Trigger: CTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTTCAGGGCCACTTCATaGACAGTTTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPFRATS*TVSWAW
Trigger: CCAGGCCCAGGAAACTGTGCATGAAGTGGCCCTGAA...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCACTCAGGGCTCCGGGTaGCATAGGGGTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLTQGSG*HRGWWV
Trigger: CACCCACCAACCCCTATGGCACCCGGAGCCCTGAGT...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSSWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGGGGATGCGGGCGACCTaGGCGTCTGGTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQGMRAT*ASGPFG
Trigger: CCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCC...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCCGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRARSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGAGCGLQVEILVVLEEAGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...AGCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp GGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GHVTVTPESAGMQPWVWEMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...CTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEPLTGC*EQSASS
Trigger: GGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGGGGGTTGCGCAGTTTaGTTTGTCTTCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTGGCAV*FVFHAG
Trigger: GCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCC...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGGCGACCTGGGCGTCTaGTCCTTTCGGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPGDLGV*SFRALC
Trigger: GCAGAGAGCCCGAAAGGACCAGACGCCCAGGTCGCC...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS-3UTR TCA 90 bp CTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGAGTCGGGCCACAGTaGACTCCTCCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQLGALLVFFALQLLVVRVGPQ*TPPRWP
Trigger: GGGCCATCGAGGAGGAGTTCACTGTGGCCCGACTCT...GACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCCCCTGTGCTATATGTaGAAGAGGAGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPPLCYM*KRREEE
Trigger: CTCTTCCTCCCTCCTCTTTCACATATAGCACAGGGG...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCCCCTGTGCTATATGTaGAAGAGGAGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSPLCYM*KRREEE
Trigger: CTCTTCCTCCCTCCTCTTTCACATATAGCACAGGGG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGTGCGGAGATCACATTaGCCAGAGCTGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSVRRSH*PELTVT
Trigger: AGTCACTGTCAGCTCTGGGCAATGTGATCTCCGCAC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTACCAGAAGCTGGTTCTaGTGGCTCTTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTTRSWF*WLFSST
Trigger: GGTGGAGGAGAAGAGCCAGCAGAACCAGCTTCTGGT...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQELGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGCAGCCCAGTAAGAGACTGGCCATGTTCTCTGTGCCACTTCTGGGCCCTAAAGCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSPVRDWPCSLCHFWALKQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...CTTTAGGGCCCAGAAGTGGCACAGAGAACATGGCCAGTCTCTTACTGGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLSWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCATCTCTCTCCTCATCTaGGCTACACCCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSISLLI*ATPSHF
Trigger: GAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGAT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCATACACACAGGGGGTTaGGCAGTTTGGTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSIHTGG*AVWFVF
Trigger: GAAGACAAACCAAACTGCGCAACCCCCTGTGTGTAT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGCCATGTTCTCTGTaGCACTTCTGGGCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSWPCSL*HFWALK
Trigger: CTTTAGGGCCCAGAAGTGGCACAGAGAACATGGCCA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACGTTGTCTCCTCGGGTaGACACCAGCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQERCLLG*TPAALP
Trigger: AGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTATCGGCAGAGCACCTTaGTGCTACATTCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPIGRAP*CYIRCW
Trigger: CCAACAACGAATGTAGCATCAAGGTGCTCTGCCGAT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAATGGTGGCCACCTTCTaGGACAGCTCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEMVATF*DSSSTR
Trigger: TCTGGTGGATGAGCTGTCTCAGAAGGTGGCCACCAT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVEELAG*ELPPGH
Trigger: GTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGTCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTTGCAAAGTACATATCTaGGGTGGAGCTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFCKVHI*GGAGCG
Trigger: GCCACACCCAGCTCCACCTCAGATATGTACTTTGCA...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACCCCTGTGCTATATGTaGAAGAGGAGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPPLCYM*KRREEE
Trigger: CTCTTCCTCCCTCCTCTTTCACATATAGCACAGGGG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPARASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGTGCAGGGGTGGTGTGTaGTCCAGAGGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKCRGGV*SRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCA...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCCAGCACGGCTCCCTCTaGTCCAGTCTTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAQHGSL*SSLADL
Trigger: AAGGTCAGCAAGACTGGAGCAGAGGGAGCCGTGCTG...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTTCCTCCTCGTATTTCTaGCGCTCCTCGGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPSSSYF*RSSGAM
Trigger: CATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGA...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGTGGAGGTTCTCCAGCTaGCGGCACCGCTTGACCACA +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEWRFSS*RHRLTT
Trigger: TGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCA...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCTGGAGGTTCTCCAGCTaGCGGCACCGCTTGACCACA +
Preference number: 4 (lower is better)
Translates to: LLQLGALLVFFALQLLVVWRFSS*RHRLTT
Trigger: TGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCA...GACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGACTCAGGGCTCCGGGTaGCATAGGGGTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQTQGSG*HRGWWV
Trigger: CACCCACCAACCCCTATGGCACCCGGAGCCCTGAGT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCACTCAGGGCTCCGGGTaGCATAGGGGTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSTQGSG*HRGWWV
Trigger: CACCCACCAACCCCTATGGCACCCGGAGCCCTGAGT...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCAGGGCTCCGACTCAGGGCTCCGGGTaGCATAGGGGTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILVVLEEAVGVTDALRAPTQGSG*HRGWWV
Trigger: CACCCACCAACCCCTATGGCACCCGGAGCCCTGAGT...CGGAGCCCTGAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR GCA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGCAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGTGTCTACCCCACCGTTaGCCTCTTTTCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLCLPHR*PLFHEL
Trigger: CAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACA...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCCGCAGAATCTCAGCCTaGTTCAGGGGCCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSRRISA*FRGRNR
Trigger: CCGATTCCGGCCCCTGAACCAGGCTGAGATTCTGCG...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCGCAATCGTCTCCTTCTaGGCCTTTGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSAIVSF*AFVFSF
Trigger: GAAGGAGAAGACAAAGGCCCAGAAGGAGACGATTGC...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCGATGCGCACCACGATaGATGAGTTGTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSRCAPR*MSCHSQ
Trigger: CTGTGAATGACAACTCATCCATCGTGGTGCGCATCG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCCCAGGGACAGCATGGTaGCCACCTTCTGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLPGTAW*PPSETA
Trigger: AGCTGTCTCAGAAGGTGGCCACCATGCTGTCCCTGG...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACACGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATRSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCAGGGCTCCGCGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILVVLEEAVGVTDALRAPRSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...CGGAGCCCTGAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp AGGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RWSWVWPAGRDSGSSGRGYLRWS*VWPAGR
Trigger: TCTACCTGCAGGCCACACCCAGCTCCACCTCAGATA...GCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GHVTVTPESAGMQPWVWELAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...CTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR CCA 90 bp GGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHVTVTPESAGMQPWVWEVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...CTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR CCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTAACGTCCAGATTACATaGGGCAGCACAGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTNVQIT*GSTGVA
Trigger: GGCTACACCTGTGCTGCCCCATGTAATCTGGACGTT...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCCAGATGGGAAGAGGATaGGACACAGGTGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAQMGRG*DTGAGV
Trigger: CACGCCTGCACCTGTGTCCCATCCTCTTCCCATCTG...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCAGCCACATGACGATTTaGTTTCCCTTCATCAATCAC +
Preference number: 4 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSSHMTI*FPFINH
Trigger: GTGATTGATGAAGGGAAATCAAATCGTCATGTGGCT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAGATACAGCTTCCCACTaGGCTTCTGCTCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEDTASH*ASAPFP
Trigger: TGGAAACGGAGCAGAAGCTCAGTGGGAAGCTGTATC...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTAGCGGCATCGTTCTCTaGTTGCAGGTGGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSGIVL*LQVAQL
Trigger: GAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTTTCGCTGGTGTCCACTaGCCTCCTGTAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFFAGVH*PPVAAA
Trigger: TGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAA...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCTTCGCTGGTGTCCACTaGCCTCCTGTAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFFAGVH*PPVAAA
Trigger: TGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAA...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRATSILR*HSTWRF
Trigger: GAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGT...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGGCTGTTGGTGTAACTaGTGCACTCAGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEGCWCN*CTQGSG
Trigger: CCCGGAGCCCTGAGTGCATCAGTTACACCAACAGCC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCTCTGGGTTCTGGTCATaGGCTCTGGGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRASGFWS*ALGQGI
Trigger: TATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGA...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCTGAAAGGGATGCGGTaGAGGTGGGGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLLKGMR*RWGAGG
Trigger: TCCTCCTGCTCCCCACCTTCACCGCATCCCTTTCAG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACTGAAAGGGATGCGGTaGAGGTGGGGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLLKGMR*RWGAGG
Trigger: TCCTCCTGCTCCCCACCTTCACCGCATCCCTTTCAG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTCTGAAAGGGATGCGGTaGAGGTGGGGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVLKGMR*RWGAGG
Trigger: TCCTCCTGCTCCCCACCTTCACCGCATCCCTTTCAG...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACTGAAAGGGATGCGGTaGAGGTGGGGAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHALKGMR*RWGAGG
Trigger: TCCTCCTGCTCCCCACCTTCACCGCATCCCTTTCAG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCACATTTTGGCAGATGTaGGTGGGCAGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSTFWQM*VGRPGA
Trigger: GGCACCTGGCCTGCCCACTCACATCTGCCAAAATGT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINPAAAG*GRPGRL
Trigger: CAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLEAEDR*SVSGDR
Trigger: TCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTC...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTGCAGGGGTGGTGTGTaGTCCAGAGGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETCRGGV*SRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTTGCAGGGGTGGTGTGTaGTCCAGAGGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFCRGGV*SRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCA...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACATGGAGGTTCTCCAGCTaGCGGCACCGCTTGACCACA +
Preference number: 4 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTWRFSS*RHRLTT
Trigger: TGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCA...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTTAGCTCCACGCTCTaGATGTATTCCGTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSFSSTL*MYSVSE
Trigger: CTCGCTTACGGAATACATGCAGAGCGTGGAGCTAAA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTTGGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FGHVTVTPESAGMQPWVWGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...CCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR GCA 90 bp TTTGGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FGHVTVTPESAGMQPWVWLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...CCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR GCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFSDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGCAGCCCAGTAAGAGACTGGCCATGTTCTCTGTGCCACTTCTGGGCCCTAAAGAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: CSPVRDWPCSLCHFWALKSWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...CTTTAGGGCCCAGAAGTGGCACAGAGAACATGGCCAGTCTCTTACTGGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAWASAA*AYQLAF
Trigger: GAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTATCTCTCTCCTCATCTaGGCTACACCCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPISLLI*ATPSHF
Trigger: GAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGAT...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTAGGCCAGGTGCCCCTTaGAGTGACCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFRPGAP*SDPGSE
Trigger: TTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCT...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCAGGCCAGGTGCCCCTTaGAGTGACCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSRPGAP*SDPGSE
Trigger: TTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCT...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCATACACACAGGGGGTTaGGCAGTTTGGTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFIHTGG*AVWFVF
Trigger: GAAGACAAACCAAACTGCGCAACCCCCTGTGTGTAT...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGGCTGGGACTCTTCTTaGGCTGCAGGGGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETGWDSS*AAGVVC
Trigger: ACACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCGCAGAATCTCAGCCTaGTTCAGGGGCCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAERRISA*FRGRNR
Trigger: CCGATTCCGGCCCCTGAACCAGGCTGAGATTCTGCG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCGCAGAATCTCAGCCTaGTTCAGGGGCCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLRRISA*FRGRNR
Trigger: CCGATTCCGGCCCCTGAACCAGGCTGAGATTCTGCG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCGGACAGATTTGTCTTaGTCACATCCAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPRTDLS*SHPEGH
Trigger: GTGACCTTCTGGATGTGACCAAGACAAATCTGTCCG...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACCCCCGAGAGAGTCCTaGAGAATCCTTGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPPPRES*RILVIL
Trigger: CAAAATGACAAGGATTCTCCAGGACTCTCTCGGGGG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTGCAATCGTCTCCTTCTaGGCCTTTGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFAIVSF*AFVFSF
Trigger: GAAGGAGAAGACAAAGGCCCAGAAGGAGACGATTGC...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDWLSSR*TFSLSP
Trigger: AGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCA...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTACAGTTTCCTGGGCCTaGAGCTTGGCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPTVSWA*SLASSS
Trigger: CGATGAGCTGGCCAAGCTCCAGGCCCAGGAAACTGT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATACAGTTTCCTGGGCCTaGAGCTTGGCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDTVSWA*SLASSS
Trigger: CGATGAGCTGGCCAAGCTCCAGGCCCAGGAAACTGT...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCATCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPSAPAA*CSSRVL
Trigger: AAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGA...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTTCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFSAPAA*CSSRVL
Trigger: AAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGA...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTTCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLSAPAA*CSSRVL
Trigger: AAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGA...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCGGCCGCCAGAAGATGTaGCTCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFGRQKM*LHCWYR
Trigger: CCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCC...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTTGGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FGHVTVTPESAGMQPWVWAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...CCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS-3UTR CCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPAVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGTTTGTCTTCCACGCTaGCATGCAACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPVCLPR*HATFWQ
Trigger: CTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAAC...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCGGGGGTTGCGCAGTTTaGTTTGTCTTCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSGGCAV*FVFHAG
Trigger: GCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCC...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCTCCAGACCTTATCACTaGAATAGGGAGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFSRPYH*NREKPQ
Trigger: CTGTGGCTTCTCCCTATTCCAGTGATAAGGTCTGGA...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CAA 72 bp CAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QFGLSSTLACNI*ADVSGQARCPL
Trigger: CAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAACCAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCTGCTCCAGTCTTGCTaGCCTTCTCACTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLLLQSC*PSHSLP
Trigger: TGGCAGGGAGTGAGAAGGTCAGCAAGACTGGAGCAG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCTGCTCCAGTCTTGCTaGCCTTCTCACTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAELLQSC*PSHSLP
Trigger: TGGCAGGGAGTGAGAAGGTCAGCAAGACTGGAGCAG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCAGCGGCATCGTTCTCTaGTTGCAGGTGGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSSGIVL*LQVAQL
Trigger: GAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCT...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAGCGGCATCGTTCTCTaGTTGCAGGTGGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSGIVL*LQVAQL
Trigger: GAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPTSILR*HSTWRF
Trigger: GAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACACAGATGAGCAGCCATTaGCAGGCTGCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTQMSSH*QAAGSS
Trigger: ACTGCTCCCAGCAGCCTGTCAATGGCTGCTCATCTG...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACAGATGAGCAGCCATTaGCAGGCTGCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLQMSSH*QAAGSS
Trigger: ACTGCTCCCAGCAGCCTGTCAATGGCTGCTCATCTG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDRASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAACATTTTGGCAGATGTaGGTGGGCAGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTTFWQM*VGRPGA
Trigger: GGCACCTGGCCTGCCCACTCACATCTGCCAAAATGT...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACAGCCTGACGCTACCTaGAAGTGCAGGTATGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLQPDAT*KCRYAA
Trigger: GGCTGCATACCTGCACTTTCAGGTAGCGTCAGGCTG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp CACAGGTGCAGGCGTGAAGCAAACATCGCCTTAACTGGAGATGTCTTAGTTCCAGAGGGGAGCGCTGACTaGTTTCGTGGGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRCRREANIALTGDVLVPEGSAD*FRGAFP
Trigger: AGGAAACGCCCCACGAAATCAGTCAGCGCTCCCCTC...TGGAACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCAGCACGGCTCCCTCTaGTCCAGTCTTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLQHGSL*SSLADL
Trigger: AAGGTCAGCAAGACTGGAGCAGAGGGAGCCGTGCTG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACAGCACGGCTCCCTCTaGTCCAGTCTTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAQHGSL*SSLADL
Trigger: AAGGTCAGCAAGACTGGAGCAGAGGGAGCCGTGCTG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATATGGTCTTTGCCCGCTaGCCAAACATCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNMVFAR*PNIRVD
Trigger: GTCCACCCTGATGTTTGGGCAGCGGGCAAAGACCAT...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCGCACATTCTCTCCATTaGGCCACCGGCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLAHSLH*ATGSAQ
Trigger: CTGAGCTGAGCCGGTGGCGCAATGGAGAGAATGTGC...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACAGCACATTCTCTCCATTaGGCCACCGGCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATAHSLH*ATGSAQ
Trigger: CTGAGCTGAGCCGGTGGCGCAATGGAGAGAATGTGC...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVAPRAR*APRWMS
Trigger: ACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGT +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLAPRAR*APRWMS
Trigger: ACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGC...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETTSCSR*NSDSRD
Trigger: GTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTCAGGGCCACTTCATaGACAGTTTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSFRATS*TVSWAW
Trigger: CCAGGCCCAGGAAACTGTGCATGAAGTGGCCCTGAA...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: APAAWCSSRVLRSSASRSAPAAW*SSRVLR
Trigger: GCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC...ACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGCTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQLGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAELGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCCCTGGATTCTTAAGTaGCCTGCTGACAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: ESWASAACAYQLAFPLSFPWILK*PADSKY
Trigger: ATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGG...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTGGGATGCGGGCGACCTaGGCGTCTGGTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFGMRAT*ASGPFG
Trigger: CCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCC...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGCGGACAGATTTGTCTTaGTCACATCCAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVRTDLS*SHPEGH
Trigger: GTGACCTTCTGGATGTGACCAAGACAAATCTGTCCG...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTCGTTGTCTCCTCGGGTaGACACCAGCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVRCLLG*TPAALP
Trigger: AGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACG...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTATGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLWLSSR*TFSLSP
Trigger: AGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCA...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSWLSSR*TFSLSP
Trigger: AGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCA...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTTTCTCTGATTGCAGGTaGCTCAGCTCCCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFFSDCR*LSSRWT
Trigger: GGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAA...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGTTCTCTGATTGCAGGTaGCTCAGCTCCCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEFSDCR*LSSRWT
Trigger: GGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAA...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTACAGTTTCCTGGGCCTaGAGCTTGGCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETTVSWA*SLASSS
Trigger: CGATGAGCTGGCCAAGCTCCAGGCCCAGGAAACTGT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATCATGCACAGTTTCCTaGGCCTGGAGCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHASCTVS*AWSLAS
Trigger: GCTGGCCAAGCTCCAGGCCCAGGAAACTGTGCATGA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAGGTTGTGGAGGGTCTaGAGTTCCCGGGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETRLWRV*SSRATV
Trigger: GACAGTTGCCCGGGAACTCCAGACCCTCCACAACCT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTAGGTTGTGGAGGGTCTaGAGTTCCCGGGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVRLWRV*SSRATV
Trigger: GACAGTTGCCCGGGAACTCCAGACCCTCCACAACCT...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCGGTCCACCTCCTGCTaGTACCGGCGCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVRSTSC*YRRLSF
Trigger: GAAGGACAAGCGCCGGTACCAGCAGGAGGTGGACCG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATACGGGTTTGGCAATCTaGGCAGAATGGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNTGLAI*AEWPRL
Trigger: CAAACGGGGCCATTCTGCCCAGATTGCCAAACCCGT...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPRWSWV*PAGRDS
Trigger: AGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFMWLHC*YRSLQS
Trigger: ACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACAT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCCCAGTAAGAGACTGGCCATGTTCTCTGTGCCACTTCTGGGCCCTAAAGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSPVRDWPCSLCHFWALKVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...CTTTAGGGCCCAGAAGTGGCACAGAGAACATGGCCAGTCTCTTACTGGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGACTGATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGATGGACCAAGGGGTGGAGATaGGAGGAGCATGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTDFVGRFLKLTGGIYRWTKGWR*EEHAAQ
Trigger: CTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGT...CCATCTGTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGGGAGGGTGCTGCATATaGGCTGAGAATGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQGGCCI*AENGWE
Trigger: CTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCC...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTGTTTGTCTTCCACGCTaGCATGCAACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFVCLPR*HATFWQ
Trigger: CTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAAC...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACCAAGCTCACTTCTTTaGACATGTGACAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEPSSLL*TCDSDP
Trigger: GGGGTCACTGTCACATGTCCAAAGAAGTGAGCTTGG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCTGCCTGTGTGTGCCTaGTTTACTATTCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFLPVCA*FTILGN
Trigger: GTTTCCCAGAATAGTAAACCAGGCACACACAGGCAG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGACAGTGACTTGTTaGTATTCTTTGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPLTVTC*YSLPRP
Trigger: TGGACGAGGCAAAGAATATCAACAAGTCACTGTCAG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCATGGTGGCCACCTTCTaGGACAGCTCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLMVATF*DSSSTR
Trigger: TCTGGTGGATGAGCTGTCTCAGAAGGTGGCCACCAT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGATGGTGGCCACCTTCTaGGACAGCTCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWMVATF*DSSSTR
Trigger: TCTGGTGGATGAGCTGTCTCAGAAGGTGGCCACCAT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTTTCGCTGGTGTCCACTaGCCTCCTGTAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCFAGVH*PPVAAA
Trigger: TGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAA...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAAGAGTCGGGCCACAGTaGACTCCTCCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVRVGPQ*TPPRWP
Trigger: GGGCCATCGAGGAGGAGTTCACTGTGGCCCGACTCT...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSEELAG*ELPPGH
Trigger: GTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTC...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTCCTCATGCTGAGAGATaGGGAGCTGGCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFPHAER*GAGRMR
Trigger: TCTCATCCTGCCAGCTCCTCATCTCTCAGCATGAGG...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTCCTCATGCTGAGAGATaGGGAGCTGGCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFPHAER*GAGRMR
Trigger: TCTCATCCTGCCAGCTCCTCATCTCTCAGCATGAGG...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTATCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSRVLRSSASRSQPEASLSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSSNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACGAGTCGTGACGTCTTaGACGAACAGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLRVVTS*TNSLRR
Trigger: CCTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACACGAGTCGTGACGTCTTaGACGAACAGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATRVVTS*TNSLRR
Trigger: CCTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCG...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCGAGTCGTGACGTCTTaGACGAACAGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACRVVTS*TNSLRR
Trigger: CCTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCGGCTGTTGGTGTAACTaGTGCACTCAGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QVEILVVLEEAVGVTDALGCWCN*CTQGSG
Trigger: CCCGGAGCCCTGAGTGCATCAGTTACACCAACAGCC...GAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAATCTCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAATGATTCCCATCAGCTaGGGGTCGTGCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLMIPIS*GSCSFP
Trigger: GGGAAAGCTGCACGACCCTCAGCTGATGGGAATCAT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp GTCTACCACCCCTGTGGTTCTAATCTACAGCGGCCAAGCTCACTTCTTTGGACATCTGGGTTCTGGTCATaGGCTCTGGGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: VYHPCGSNLQRPSSLLWTSGFWS*ALGQGI
Trigger: TATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGA...TGTCCAAAGAAGTGAGCTTGGCCGCTGTAGATTAGAACCACAGGGGTGGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTGAGCTTCCCACCTCTTaGAAATCCACCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFELPTS*KSTLPL
Trigger: AAGGGGCAGGGTGGATTTTCAAGAGGTGGGAAGCTC...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWRASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVRASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCTTCCCACTGAGCTTCTaGTCCGTTTCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLFPLSF*SVSMFS
Trigger: GGAGAACATGGAAACGGAGCAGAAGCTCAGTGGGAA...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAGACCTTCTCACTCCCTaGCAGGTCCACCAGATACAG +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHADLLTP*QVHQIQ
Trigger: CTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTC...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGATGGTCTTTGCCCGCTaGCCAAACATCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQMVFAR*PNIRVD
Trigger: GTCCACCCTGATGTTTGGGCAGCGGGCAAAGACCAT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGATGGTCTTTGCCCGCTaGCCAAACATCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEMVFAR*PNIRVD
Trigger: GTCCACCCTGATGTTTGGGCAGCGGGCAAAGACCAT...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGT +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLAPRAR*APRWMS
Trigger: ACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGC...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTCCTCCTCGTATTTCTaGCGCTCCTCGGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVSSSYF*RSSGAM
Trigger: CATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCACCAGAAGCTGGTTCTaGTGGCTCTTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLTRSWF*WLFSST
Trigger: GGTGGAGGAGAAGAGCCAGCAGAACCAGCTTCTGGT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCCTTCTTCACTTCATCTaGATCCTGAGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPALLHFI*ILSVRL
Trigger: GAGCCTGACACTCAGGATGCAGATGAAGTGAAGAAG...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETAPAAW*SSRVLR
Trigger: GCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACAGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATAPAAW*SSRVLR
Trigger: GCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETRPLRS*LDCSCR
Trigger: GCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGC +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQRPLRS*LDCSCR
Trigger: GCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCAGAATGGCCCCGTTTaGCCGAGCTCTTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLQNGPV*PSSCSE
Trigger: TTCGCTACAAGAGCTCGGGCAAACGGGGCCATTCTG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTCTGGTAGTTCTGGAAGAGGCTGTTGGTGTAACTGATGCACTCAGGGCTCCGCAGAATGGCCCCGTTTaGCCGAGCTCTTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: ILVVLEEAVGVTDALRAPQNGPV*PSSCSE
Trigger: TTCGCTACAAGAGCTCGGGCAAACGGGGCCATTCTG...CGGAGCCCTGAGTGCATCAGTTACACCAACAGCCTCTTCCAGAACTACCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR GCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACACTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 4 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQESDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCTGTCTACCCCACCGTTaGCCTCTTTTCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRACLPHR*PLFHEL
Trigger: CAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACA...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACCCTGGATTCTTAAGTaGCCTGCTGACAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPPWILK*PADSKY
Trigger: ATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAATCTTCCACGCTGGCATaGAACATTTTGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQESSTLA*NILADV
Trigger: CACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGA...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCTCTTCCACGCTGGCATaGAACATTTTGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPASSTLA*NILADV
Trigger: CACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGA...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACGGGATGCGGGCGACCTaGGCGTCTGGTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINGMRAT*ASGPFG
Trigger: CCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCC...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCACAACCCTTGACAAATaGCACCCGGTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLTTLDK*HPVLVL
Trigger: GAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGT...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGACATCAGGGTGGACTTaGTCTCTGCATCATTATAAC +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLTSGWT*SLHHYN
Trigger: GTTATAATGATGCAGAGACCAAGTCCACCCTGATGT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTTCATCCACCAGAAGCTaGTTCTGCTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSSTRS*FCWLFS
Trigger: GGAGAAGAGCCAGCAGAACCAGCTTCTGGTGGATGA...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACTCCAGGGACAGCATaGTGGCCACCTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWTPGTA*WPPSET
Trigger: TGTCTCAGAAGGTGGCCACCATGCTGTCCCTGGAGT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAAIRFR*CPLTSC
Trigger: ACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGC...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGCCCACTGATCTCCACTaGCAGCTTAATCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKPTDLH*QLNLPV
Trigger: AACGGGGAGATTAAGCTGCCAGTGGAGATCAGTGGG...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCCCACTGATCTCCACTaGCAGCTTAATCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPPTDLH*QLNLPV
Trigger: AACGGGGAGATTAAGCTGCCAGTGGAGATCAGTGGG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAGGCGCTTGTCCTTCATaGCGCCCTCCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVGACPS*RPPWPP
Trigger: AGGAGGCCAAGGAGGGCGCCATGAAGGACAAGCGCC...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAACGGGTTTGGCAATCTaGGCAGAATGGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLTGLAI*AEWPRL
Trigger: CAAACGGGGCCATTCTGCCCAGATTGCCAAACCCGT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTACGGGTTTGGCAATCTaGGCAGAATGGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVTGLAI*AEWPRL
Trigger: CAAACGGGGCCATTCTGCCCAGATTGCCAAACCCGT...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSRWSWV*PAGRDS
Trigger: AGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWYLRWS*VWPAGR
Trigger: TCTACCTGCAGGCCACACCCAGCTCCACCTCAGATA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGGCCGCCAGAAGATGTaGCTCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREGRQKM*LHCWYR
Trigger: CCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTT +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVGLETA*LVYPTV
Trigger: AACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACC...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTT +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFGLETA*LVYPTV
Trigger: AACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACC...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTT +
Preference number: 4 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIGLETA*LVYPTV
Trigger: AACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTTTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPVQPALTSWHSHSASFPLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...AGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCTTGGTGACAGCCACATaGCGATTTGATTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPALVTAT*RFDFPS
Trigger: TGAAGGGAAATCAAATCGTCATGTGGCTGTCACCAA...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTAGCGGCATCGTTCTCTaGTTGCAGGTGGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCSGIVL*LQVAQL
Trigger: GAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCT...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGAGTCGGGCCACAGTaGACTCCTCCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFRVGPQ*TPPRWP
Trigger: GGGCCATCGAGGAGGAGTTCACTGTGGCCCGACTCT...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAAGAGTCGGGCCACAGTaGACTCCTCCTCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRRVGPQ*TPPRWP
Trigger: GGGCCATCGAGGAGGAGTTCACTGTGGCCCGACTCT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACTTCATCTGCATCCTaGGTGTCAGGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWTSSAS*VSGSLS
Trigger: GGACAAGGAGCCTGACACTCAGGATGCAGATGAAGT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGACTTCATCTGCATCCTaGGTGTCAGGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQTSSAS*VSGSLS
Trigger: GGACAAGGAGCCTGACACTCAGGATGCAGATGAAGT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGAGGAATCAATCATTTTaGCTACACCTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVRNQSF*LHLPVT
Trigger: GGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCT...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAGAGATTTTGCCAATaGGCTGGAAGCCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLERFCQ*AGSPQT
Trigger: GGTTTGGGGGCTTCCAGCTCATTGGCAAAATCTCTC...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCACACAGGTGCAGGCGTaGAGCAAACATCGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLTQVQA*SKHRLN
Trigger: GTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTGT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGATGGGAGGGGAGCGCTaGCTGATTTCGTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWMGGER*LISWGV
Trigger: AACGCCCCACGAAATCAGTCAGCGCTCCCCTCCCAT...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCAGTTTCCATGTTCTCCTaGTTGATGTTGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPVSMFS*LMLMRK
Trigger: CTTCCTCATCAACATCAAGCAGGAGAACATGGAAAC...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTTTCCCACTGAGCTTCTaGTCCGTTTCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPFPLSF*SVSMFS
Trigger: GGAGAACATGGAAACGGAGCAGAAGCTCAGTGGGAA...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCGTGCGGAGATCACATTaGCCAGAGCTGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLVRRSH*PELTVT
Trigger: AGTCACTGTCAGCTCTGGGCAATGTGATCTCCGCAC...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCATGGTCTTTGCCCGCTaGCCAAACATCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFMVFAR*PNIRVD
Trigger: GTCCACCCTGATGTTTGGGCAGCGGGCAAAGACCAT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTTCCTCCTCGTATTTCTaGCGCTCCTCGGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSSSSYF*RSSGAM
Trigger: CATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGA...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCACCAGAAGCTGGTTCTaGTGGCTCTTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFTRSWF*WLFSST
Trigger: GGTGGAGGAGAAGAGCCAGCAGAACCAGCTTCTGGT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGAAATGTCAGCTCCTaGAGCTTGGTGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKRNVSS*SLVLFS
Trigger: CGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCT...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATAGAAATGTCAGCTCCTaGAGCTTGGTGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDRNVSS*SLVLFS
Trigger: CGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCT...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLRSCLD*SCRSYR
Trigger: TCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTCAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAATCCAGCTCATCACTTCAACTTGAGGGCACTGAAAGTGCAGGTATGCAGCCGAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: KSSSSLQLEGTESAGMQPSWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...CGGCTGCATACCTGCACTTTCAGTGCCCTCAAGTTGAAGTGATGAGCTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674980.1
CDS-3UTR GCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVWASAA*AYQLAF
Trigger: GAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCCTCACAACGCAGATCTaGATTGTCACGTACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLLTTQI*IVTYQL
Trigger: AAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAG...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGAATCTCCTCCGGGCTaGACACAAAGCGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETESPPG*TQSVQY
Trigger: GTACTGAACGCTTTGTGTCCAGCCCGGAGGAGATTC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATGCAATCGTCTCCTTCTaGGCCTTTGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNAIVSF*AFVFSF
Trigger: GAAGGAGAAGACAAAGGCCCAGAAGGAGACGATTGC...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCGATGCGCACCACGATaGATGAGTTGTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEERCAPR*MSCHSQ
Trigger: CTGTGAATGACAACTCATCCATCGTGGTGCGCATCG...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGTTGTCTCCTCGGGTaGACACCAGCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERCLLG*TPAALP
Trigger: AGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTCTCTGATTGCAGGTaGCTCAGCTCCCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREFSDCR*LSSRWT
Trigger: GGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAA...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCCAGGGACAGCATGGTaGCCACCTTCTGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVPGTAW*PPSETA
Trigger: AGCTGTCTCAGAAGGTGGCCACCATGCTGTCCCTGG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCCAGGGACAGCATGGTaGCCACCTTCTGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREPGTAW*PPSETA
Trigger: AGCTGTCTCAGAAGGTGGCCACCATGCTGTCCCTGG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTCCAGGGACAGCATGGTaGCCACCTTCTGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAPGTAW*PPSETA
Trigger: AGCTGTCTCAGAAGGTGGCCACCATGCTGTCCCTGG...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTCATGCACAGTTTCCTaGGCCTGGAGCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRESCTVS*AWSLAS
Trigger: GCTGGCCAAGCTCCAGGCCCAGGAAACTGTGCATGA...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCTCATGCACAGTTTCCTaGGCCTGGAGCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSSCTVS*AWSLAS
Trigger: GCTGGCCAAGCTCCAGGCCCAGGAAACTGTGCATGA...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCTCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLQLGALLVFFALQLLVVSAPAA*CSSRVL
Trigger: AAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGA...GACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGGCCGCCAGAAGATGTaGCTCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSGRQKM*LHCWYR
Trigger: CCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTCTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGATTTTAAATCAGCTCTaGGTTCTGGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLILNQL*VLVMSS
Trigger: AGAGCTCATGACCAGAACCCAGAGCTGATTTAAAAT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWPLTGC*EQSASS
Trigger: GGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGG...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 4 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGGGTTGCGCAGTTTaGTTTGTCTTCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAGGCAV*FVFHAG
Trigger: GCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCC...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGAGCGCTGACTGATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACTCTCTGTGCCACTTCTaGGCCCTAAAGCAACCTTGG +
Preference number: 4 (lower is better)
Translates to: GALTDFVGRFLKLTGGIYSLCHF*ALKQPW
Trigger: CCAAGGTTGCTTTAGGGCCCAGAAGTGGCACAGAGA...GTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATCAGTCAGCGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCATCGGCAGAGCACCTTaGTGCTACATTCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLIGRAP*CYIRCW
Trigger: CCAACAACGAATGTAGCATCAAGGTGCTCTGCCGAT...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGGTTCAGTACAACCCTTaGCAAATGGCACCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQVQYNP*QMAPGS
Trigger: AGAACCGGGTGCCATTTGTCAAGGGTTGTACTGAAC...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCGTTCATTCATGTTGGTaGCAGCCACATGACGATTTG +
Preference number: 4 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRAVHSCW*QPHDDL
Trigger: CAAATCGTCATGTGGCTGTCACCAACATGAATGAAC...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTACTGCTCCAGTCTTGCTaGCCTTCTCACTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVLLQSC*PSHSLP
Trigger: TGGCAGGGAGTGAGAAGGTCAGCAAGACTGGAGCAG...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCCTGACAGTGACTTGTTaGTATTCTTTGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLLTVTC*YSLPRP
Trigger: TGGACGAGGCAAAGAATATCAACAAGTCACTGTCAG...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTTCGCTGGTGTCCACTaGCCTCCTGTAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLFAGVH*PPVAAA
Trigger: TGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTAACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSRVLRSSASRSQPEASLTSILR*HSTWRF
Trigger: GAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGT...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTTCTTCTGCTTCTCGTTaGTCTCGTCCCGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFSSASR*SRPGAG
Trigger: CCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGA...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAATCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQESNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCGTACCAGCTGTTTGTaGACCTTTGTAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPRTSCL*TFVSCS
Trigger: GGAACAGCTTACAAAGGTTCACAAACAGCTGGTACG...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAGGCTGTTGGTGTAACTaGTGCACTCAGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRGCWCN*CTQGSG
Trigger: CCCGGAGCCCTGAGTGCATCAGTTACACCAACAGCC...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGCAGCAAGGACATCTTTaGCAATCTGCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKQQGHL*QSAWHM
Trigger: CATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTG...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCAGCAAGGACATCTTTaGCAATCTGCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEQQGHL*QSAWHM
Trigger: CATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTG...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACAAAGTAAGAAACCTTaGTGTGGAACTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKESWASAACAYQLAFPQSKKP*CGTQGS
Trigger: AGAACCTTGAGTTCCACATCAAGGTTTCTTACTTTG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAAGGTGAGGGGTGTATaGAGAAAATTATATGTCTCA +
Preference number: 4 (lower is better)
Translates to: WASAACAYQLAFPLSFLSKVRGV*RKLYVS
Trigger: TGAGACATATAATTTTCTTCATACACCCCTCACCTT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEELPSFP*VAALVQ
Trigger: CTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAA...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCACTGAGGCAGGGGAATaGCTGGATCTCCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVTEAGE*LDLLDN
Trigger: GTTGTCCAGGAGATCCAGTCATTCCCCTGCCTCAGT...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp GATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGATGGGAAGAGCTGAGAGTGTCCCTGTaGGATCACAAACGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: DFVGRFLKLTGGIYRWEELRVSL*DHKRQG
Trigger: TCCCTGCCGTTTGTGATCTCACAGGGACACTCTCAG...CTCTTCCCATCTGTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLEAEDR*SVSGDR
Trigger: TCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTC...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGATGCAGGGGTGGTGTGTaGTCCAGAGGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRCRGGV*SRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCA...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLGLFLG*RGGVCS
Trigger: GGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCC...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLRFLSS*TDRFVL
Trigger: CAAGACAAATCTGTCCGTGCACGAGGACAAGAACCG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTTCCCACTGAGCTTCTaGTCCGTTTCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWFPLSF*SVSMFS
Trigger: GGAGAACATGGAAACGGAGCAGAAGCTCAGTGGGAA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGACCTTCTCACTCCCTaGCAGGTCCACCAGATACAG +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREDLLTP*QVHQIQ
Trigger: CTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGGCATCGTTCTCTGATTaGAGGTGGCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWASFSD*RWLSSR
Trigger: GCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGC...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTGCATCGTTCTCTGATTaGAGGTGGCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLASFSD*RWLSSR
Trigger: GCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGC...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTACCAGAAGCTGGTTCTaGTGGCTCTTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMATRSWF*WLFSST
Trigger: GGTGGAGGAGAAGAGCCAGCAGAACCAGCTTCTGGT...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSTSCSR*NSDSRD
Trigger: GTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTTTCAGGGCCACTTCATaGACAGTTTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCFRATS*TVSWAW
Trigger: CCAGGCCCAGGAAACTGTGCATGAAGTGGCCCTGAA...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTATTCAGGGCCACTTCATaGACAGTTTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLFRATS*TVSWAW
Trigger: CCAGGCCCAGGAAACTGTGCATGAAGTGGCCCTGAA...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATCTTCTTCACTTCATCTaGATCCTGAGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDLLHFI*ILSVRL
Trigger: GAGCCTGACACTCAGGATGCAGATGAAGTGAAGAAG...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREAPAAW*SSRVLR
Trigger: GCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACTTGAACGAACAGCTTaGGAAGGTTGTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHALERTA*EGCGGS
Trigger: AGACCCTCCACAACCTTCGCAAGCTGTTCGTTCAAG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCTCACAACGCAGATCTaGATTGTCACGTACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLLTTQI*IVTYQL
Trigger: CAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCTTGGCCTCCTTCAGTaGACCCTCCAGGGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSLGLLQ*TLQGLN
Trigger: GTTAAGGCCCTGGAGGGTGCACTGAAGGAGGCCAAG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAATGCGGTCCACCTCCTaGTGGTACCGGCGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLMRSTS*WYRRLS
Trigger: GGACAAGCGCCGGTACCAGCAGGAGGTGGACCGCAT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCAGAATGGCCCCGTTTaGCCGAGCTCTTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVQNGPV*PSSCSE
Trigger: TTCGCTACAAGAGCTCGGGCAAACGGGGCCATTCTG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCAGAATGGCCCCGTTTaGCCGAGCTCTTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREQNGPV*PSSCSE
Trigger: TTCGCTACAAGAGCTCGGGCAAACGGGGCCATTCTG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEKMWLH*WYRSLQ
Trigger: TTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTT...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTAATCTGCATGGCACATaGATGATAAACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTNLHGT*MINLLL
Trigger: CAAGAGCAAGTTTATCATGCATGTGCCATGCAGATT...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSSDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTAGTTGGGTGATAGGCTaGCCTGCCGCTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMASWVIG*PAAGES
Trigger: AGATTCTCCAGCGGCAGGGCAGCCTATCACCCAACT...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAGGAGTCATGGGCCAGTaGAGCCTGCGCTTACCAGCT +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSGVMGQ*SLRLPA
Trigger: AGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCC...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGTGTCTACCCCACCGTTaGCCTCTTTTCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAECLPHR*PLFHEL
Trigger: CAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACA...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCCCCTGGATTCTTAAGTaGCCTGCTGACAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLPWILK*PADSKY
Trigger: ATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGG...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACAGGTGCAGGCGTGAAGCAAACATCGCCTTAACTGGAGATGTCTTAGTTCCAAGGGCTCAGCTTAGATaGAGCCCAGTAAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: HRCRREANIALTGDVLVPRAQLR*SPVRDW
Trigger: CCAGTCTCTTACTGGGCTGCATCTAAGCTGAGCCCT...TGGAACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACAACCCTTGACAAATaGCACCCGGTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWTTLDK*HPVLVL
Trigger: GAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCCCCCGAGAGAGTCCTaGAGAATCCTTGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLPPRES*RILVIL
Trigger: CAAAATGACAAGGATTCTCCAGGACTCTCTCGGGGG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACGTTGTCTCCTCGGGTaGACACCAGCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSRCLLG*TPAALP
Trigger: AGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTTTCTCTGATTGCAGGTaGCTCAGCTCCCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSFSDCR*LSSRWT
Trigger: GGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAA...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTACAGTTTCCTGGGCCTaGAGCTTGGCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLTVSWA*SLASSS
Trigger: CGATGAGCTGGCCAAGCTCCAGGCCCAGGAAACTGT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAAGGTTGTGGAGGGTCTaGAGTTCCCGGGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSRLWRV*SSRATV
Trigger: GACAGTTGCCCGGGAACTCCAGACCCTCCACAACCT...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGAGCTTGCGAAGGTTGTaGAGGGTCTGGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWSLRRL*RVWSSR
Trigger: CCGGGAACTCCAGACCCTCCACAACCTTCGCAAGCT...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTAGCTTGCGAAGGTTGTaGAGGGTCTGGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSSLRRL*RVWSSR
Trigger: CCGGGAACTCCAGACCCTCCACAACCTTCGCAAGCT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPMWLHC*YRSLQS
Trigger: ACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACAT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCGGCCGCCAGAAGATGTaGCTCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLGRQKM*LHCWYR
Trigger: CCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCC...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGTCTGGAGACAGCATaGCTTGTCTACCCCACCGTT +
Preference number: 4 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAGLETA*LVYPTV
Trigger: AACGGTGGGGTAGACAAGCCATGCTGTCTCCAGACC...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTGGGGGTTGCGCAGTTTaGTTTGTCTTCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFGGCAV*FVFHAG
Trigger: GCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCC...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGGGGGTTGCGCAGTTTaGTTTGTCTTCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSGGCAV*FVFHAG
Trigger: GCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
3UTR CAA 72 bp GACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCCATCCCTGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: DWISGHQTFSPG*EWLVTSIPAVT
Trigger: GGTAACTGCAGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGTTGGTGACAGCCACATaGCGATTTGATTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKLVTAT*RFDFPS
Trigger: TGAAGGGAAATCAAATCGTCATGTGGCTGTCACCAA...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCGTACCAGCTGTTTGTaGACCTTTGTAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACRTSCL*TFVSCS
Trigger: GGAACAGCTTACAAAGGTTCACAAACAGCTGGTACG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTGCAAAGTACATATCTaGGGTGGAGCTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVCKVHI*GGAGCG
Trigger: GCCACACCCAGCTCCACCTCAGATATGTACTTTGCA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAAGGTTTGCAGCATGCTaGGAAGAGGCCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVRFAAC*EEASVP
Trigger: AGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCT...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCAGCAAGGACATCTTTaGCAATCTGCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFQQGHL*QSAWHM
Trigger: CATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCGGTATGTGTTTTCCCTaGGGATGTCTGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFGMCFP*GCLSIS
Trigger: GCTTATGGACAGACATCCTCAGGGAAAACACATACC...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTATGATTCCCATCAGCTaGGGGTCGTGCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFMIPIS*GSCSFP
Trigger: GGGAAAGCTGCACGACCCTCAGCTGATGGGAATCAT...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACGGGCAATTCGAGGAATaGTTCCCATCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDGQFEE*FPSAEG
Trigger: ACCCTCAGCTGATGGGAATCATTCCTCGAATTGCCC...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGTCTGGGTTCTGGTCATaGGCTCTGGGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWSGFWS*ALGQGI
Trigger: TATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGA...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCACAGATGAGCAGCCATTaGCAGGCTGCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSQMSSH*QAAGSS
Trigger: ACTGCTCCCAGCAGCCTGTCAATGGCTGCTCATCTG...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSRASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSLPSFP*VAALVQ
Trigger: CTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAA...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCACATTTTGGCAGATGTaGGTGGGCAGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLTFWQM*VGRPGA
Trigger: GGCACCTGGCCTGCCCACTCACATCTGCCAAAATGT...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTCCGAGGAAGCAGCCTaGCGCTACCTGAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLSEEAA*RYLKVQ
Trigger: CTGCACTTTCAGGTAGCGTCAGGCTGCTTCCTCGGA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINEAEDR*SVSGDR
Trigger: TCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTC...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLEAEDR*SVSGDR
Trigger: TCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACTGCAGGGGTGGTGTGTaGTCCAGAGGAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINCRGGV*SRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCA...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSGLFLG*RGGVCS
Trigger: GGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCC...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINGLFLG*RGGVCS
Trigger: GGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCC...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACAGCACGGCTCCCTCTaGTCCAGTCTTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRQHGSL*SSLADL
Trigger: AAGGTCAGCAAGACTGGAGCAGAGGGAGCCGTGCTG...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTGCATCGTTCTCTGATTaGAGGTGGCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCASFSD*RWLSSR
Trigger: GCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGC...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTTTAGCTCCACGCTCTaGATGTATTCCGTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWFSSTL*MYSVSE
Trigger: CTCGCTTACGGAATACATGCAGAGCGTGGAGCTAAA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCTTCTTCACTTCATCTaGATCCTGAGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFLLHFI*ILSVRL
Trigger: GAGCCTGACACTCAGGATGCAGATGAAGTGAAGAAG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWAPAAW*SSRVLR
Trigger: GCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGC...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLRSCLD*SCRSYR
Trigger: TCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCT...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSRPLRS*LDCSCR
Trigger: GCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCAGAATGGCCCCGTTTaGCCGAGCTCTTGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWQNGPV*PSSCSE
Trigger: TTCGCTACAAGAGCTCGGGCAAACGGGGCCATTCTG...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTACTCAGGGCTCCGGGTaGCATAGGGGTTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANITQGSG*HRGWWV
Trigger: CACCCACCAACCCCTATGGCACCCGGAGCCCTGAGT...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETKMWLH*WYRSLQ
Trigger: TTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFKMWLH*WYRSLQ
Trigger: TTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTT...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAGAGATGGGAGGAGCATaGCGCCCAGTATGGAACAAG +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVEMGGA*RPVWNK
Trigger: CTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTC...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACACTTCAGTATGGAGGGTaGTGCATATGGGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATLQYGG*CIWAEN
Trigger: ATTCTCAGCCCATATGCAGCACCCTCCATACTGAAG...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCCCTGGATTCTTAAGTaGCCTGCTGACAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPPWILK*PADSKY
Trigger: ATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAAGGCCAGGTGCCCCTTaGAGTGACCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLRPGAP*SDPGSE
Trigger: TTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTTTTTCTGCCTGTGTGTaGCTGGTTTACTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPFSACV*LVYYSG
Trigger: CCCAGAATAGTAAACCAGGCACACACAGGCAGAAAA...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp TCATGGTTACTCTGCTCTGAGAGTGTCCCTGTGAGATCACAAACGGCAGGGACTGGAACAGGTGGCATCTaGACACACTTTGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: SWLLCSESVPVRSQTAGTGTGGI*THFGLL
Trigger: CAGTAAACCAAAGTGTGTGCAGATGCCACCTGTTCC...AGTCCCTGCCGTTTGTGATCTCACAGGGACACTCTCAGAGCAGAGTAACCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTACGCAGAATCTCAGCCTaGTTCAGGGGCCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLRRISA*FRGRNR
Trigger: CCGATTCCGGCCCCTGAACCAGGCTGAGATTCTGCG...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCGCAGAATCTCAGCCTaGTTCAGGGGCCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINRRISA*FRGRNR
Trigger: CCGATTCCGGCCCCTGAACCAGGCTGAGATTCTGCG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CCA 90 bp AATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACACGGACAGATTTGTCTTaGTCACATCCAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NTHRGLRSLVCLPRWHATRTDLS*SHPEGH
Trigger: GTGACCTTCTGGATGTGACCAAGACAAATCTGTCCG...TGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAATTTGCTGTCACGATATaGAACATAGCTTTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEFAVTI*NIAFSA
Trigger: GGCACTAAAAGCTATGTTCCATATCGTGACAGCAAA...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTACTCCAGGGACAGCATaGTGGCCACCTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLTPGTA*WPPSET
Trigger: TGTCTCAGAAGGTGGCCACCATGCTGTCCCTGGAGT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCCCACTGATCTCCACTaGCAGCTTAATCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREPTDLH*QLNLPV
Trigger: AACGGGGAGATTAAGCTGCCAGTGGAGATCAGTGGG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAAGCTTGCGAAGGTTGTaGAGGGTCTGGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRSLRRL*RVWSSR
Trigger: CCGGGAACTCCAGACCCTCCACAACCTTCGCAAGCT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSRWSWV*PAGRDS
Trigger: AGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLRWSWV*PAGRDS
Trigger: AGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTTATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLYLRWS*VWPAGR
Trigger: TCTACCTGCAGGCCACACCCAGCTCCACCTCAGATA...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGGCCGCCAGAAGATGTaGCTCCACTGCTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLGRQKM*LHCWYR
Trigger: CCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGGTCACTCCTGGAGGAAGAGACCCACCATGATCAGCTCCATAGAAATTAAACTGGCTGCTGTCTCTTaGTGGAGAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGHSWRKRPTMISSIEIKLAAVS*WRGKSL
Trigger: CAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAG...TTTAATTTCTATGGAGCTGATCATGGTGGGTCTCTTCCTCCAGGAGTGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGCTCTTGAGTCGTGTTTaGGGGGAATACACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWLLSRV*GEYTVK
Trigger: TTTGACCGTGTATTCCCCCCAAACACGACTCAAGAG...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTCTACCACCCCTGTGGTTCTAATCTACAGCGGCCAAGCTCACTTCTTTGGACACCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: VYHPCGSNLQRPSSLLWTPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...TGTCCAAAGAAGTGAGCTTGGCCGCTGTAGATTAGAACCACAGGGGTGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCCCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTAAAAGAACCATGTGGTaGCAACATTACATAAAACCC +
Preference number: 4 (lower is better)
Translates to: HGPVQPALTSWHSHSASFKRTMW*QHYIKP
Trigger: GGGTTTTATGTAATGTTGCCACCACATGGTTCTTTT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGTTTGTCTTCCACGCTaGCATGCAACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIVCLPR*HATFWQ
Trigger: CTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAAC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGGTTTGTCTTCCACGCTaGCATGCAACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWVCLPR*HATFWQ
Trigger: CTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAAC...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGGTCACTCCTGGAGGAAGAGACCCACCATGATCAGCTCCATAGAAATTAAAAGGCAGGGGAATGACTaGATCTCCTGGACAACACAG +
Preference number: 4 (lower is better)
Translates to: AGHSWRKRPTMISSIEIKRQGND*ISWTTQ
Trigger: CTGTGTTGTCCAGGAGATCCAGTCATTCCCCTGCCT...TTTAATTTCTATGGAGCTGATCATGGTGGGTCTCTTCCTCCAGGAGTGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAACGGCAGGTCACTCCTaGAGGAAGAGACCCACCATG +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSTAGHS*RKRPTM
Trigger: CATGGTGGGTCTCTTCCTCCAGGAGTGACCTGCCGT...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGAGCCCAGTAAGAGACTaGCCATGTTCTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRESPVRD*PCSLCH
Trigger: GTGGCACAGAGAACATGGCCAGTCTCTTACTGGGCT...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTGGTGACAGCCACATaGCGATTTGATTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVLVTAT*RFDFPS
Trigger: TGAAGGGAAATCAAATCGTCATGTGGCTGTCACCAA...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGGTTCATTCATGTTGGTaGCAGCCACATGACGATTTG +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWVHSCW*QPHDDL
Trigger: CAAATCGTCATGTGGCTGTCACCAACATGAATGAAC...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGCTGACAGTGACTTGTTaGTATTCTTTGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQLTVTC*YSLPRP
Trigger: TGGACGAGGCAAAGAATATCAACAAGTCACTGTCAG...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAATGGTGGCCACCTTCTaGGACAGCTCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRMVATF*DSSSTR
Trigger: TCTGGTGGATGAGCTGTCTCAGAAGGTGGCCACCAT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCCACAGACTTGACTTCTaGTTTGATTTTGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPAHRLDF*FDFADV
Trigger: TACATCAGCAAAATCAAATCAGAAGTCAAGTCTGTG...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFTSILR*HSTWRF
Trigger: GAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGT...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCCCTCATGCTGAGAGATaGGGAGCTGGCAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLPHAER*GAGRMR
Trigger: TCTCATCCTGCCAGCTCCTCATCTCTCAGCATGAGG...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCACGAGTCGTGACGTCTTaGACGAACAGCTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSRVVTS*TNSLRR
Trigger: CCTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCG...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPAHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGGGCAATTCGAGGAATaGTTCCCATCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSGQFEE*FPSAEG
Trigger: ACCCTCAGCTGATGGGAATCATTCCTCGAATTGCCC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCCCCTGTGCTATATGTaGAAGAGGAGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSPLCYM*KRREEE
Trigger: CTCTTCCTCCCTCCTCTTTCACATATAGCACAGGGG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAELSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTAGGGCCTCTTTTCCTTaGAGGAGTCATGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFRASFP*RSHGPV
Trigger: CACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCT...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTACATTTTGGCAGATGTaGGTGGGCAGGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLTFWQM*VGRPGA
Trigger: GGCACCTGGCCTGCCCACTCACATCTGCCAAAATGT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
CDS-3UTR TCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAGGAGATATTCTGCACTaGGGCAGGGGAATGACTGGA +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSGDILH*GRGMTG
Trigger: TCCAGTCATTCCCCTGCCTCAGTGCAGAATATCTCC...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIGLFLG*RGGVCS
Trigger: GGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERFLSS*TDRFVL
Trigger: CAAGACAAATCTGTCCGTGCACGAGGACAAGAACCG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVRFLSS*TDRFVL
Trigger: CAAGACAAATCTGTCCGTGCACGAGGACAAGAACCG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGGTTTCCATGTTCTCCTaGTTGATGTTGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKVSMFS*LMLMRK
Trigger: CTTCCTCATCAACATCAAGCAGGAGAACATGGAAAC...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGGTTTCCATGTTCTCCTaGTTGATGTTGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEVSMFS*LMLMRK
Trigger: CTTCCTCATCAACATCAAGCAGGAGAACATGGAAAC...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTGACCTTCTCACTCCCTaGCAGGTCCACCAGATACAG +
Preference number: 4 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFDLLTP*QVHQIQ
Trigger: CTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTC...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGCACATTCTCTCCATTaGGCCACCGGCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLAHSLH*ATGSAQ
Trigger: CTGAGCTGAGCCGGTGGCGCAATGGAGAGAATGTGC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGT +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYAPRAR*APRWMS
Trigger: ACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTTGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGT +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFWSSIC*LSFSMS
Trigger: ACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCA...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTATGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGT +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLWSSIC*LSFSMS
Trigger: ACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCA...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGT +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWWSSIC*LSFSMS
Trigger: ACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGCATCGTTCTCTGATTaGAGGTGGCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLASFSD*RWLSSR
Trigger: GCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSTSCSR*NSDSRD
Trigger: GTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGT...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLRSCLD*SCRSYR
Trigger: TCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCT...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGC +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSRPLRS*LDCSCR
Trigger: GCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCT...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCTTGAACGAACAGCTTaGGAAGGTTGTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGRELERTA*EGCGGS
Trigger: AGACCCTCCACAACCTTCGCAAGCTGTTCGTTCAAG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCATCTCTCTCCTCATCTaGGCTACACCCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFISLLI*ATPSHF
Trigger: GAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGAT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCAGCTTCTCTATGAGTTaGCTTTGTTGGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: DPSGSSLRASHLLKIHPASFSMS*LCWLIS
Trigger: TGAAATCAACCAACAAAGCCAACTCATAGAGAAGCT...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVAIRFR*CPLTSC
Trigger: ACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCCCACTGATCTCCACTaGCAGCTTAATCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSPTDLH*QLNLPV
Trigger: AACGGGGAGATTAAGCTGCCAGTGGAGATCAGTGGG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATCATGCACAGTTTCCTaGGCCTGGAGCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLSCTVS*AWSLAS
Trigger: GCTGGCCAAGCTCCAGGCCCAGGAAACTGTGCATGA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVSAPAA*CSSRVL
Trigger: AAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAAGCTTGCGAAGGTTGTaGAGGGTCTGGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLSLRRL*RVWSSR
Trigger: CCGGGAACTCCAGACCCTCCACAACCTTCGCAAGCT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAACGGGTTTGGCAATCTaGGCAGAATGGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSTGLAI*AEWPRL
Trigger: CAAACGGGGCCATTCTGCCCAGATTGCCAAACCCGT...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFMWLHC*YRSLQS
Trigger: ACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACAT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTAGGCTGCCCTGCCGCTaGAGAATCTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSRLPCR*RILVFL
Trigger: GAGGAAGACCAAGATTCTCCAGCGGCAGGGCAGCCT...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTTCCTTGAAGGAGTCATaGGCCAGTGCAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSSLKES*ASAACA
Trigger: AGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTTTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCGTTTGTCTTCCACGCTaGCATGCAACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFVCLPR*HATFWQ
Trigger: CTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAAC...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGATGGGAAGAGATTCTGGGAAACCCCTaGAGAGGGCTCAGCTTAGAT +
Preference number: 4 (lower is better)
Translates to: DFVGRFLKLTGGIYRWEEILGNP*RGLSLD
Trigger: ATCTAAGCTGAGCCCTCTCCAGGGGTTTCCCAGAAT...CTCTTCCCATCTGTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CAA 72 bp CCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGCAACATTTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSKYTQGVAQFG*SSTLACNILAD
Trigger: ATCTGCCAAAATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAGCCACATGACGATTTaGTTTCCCTTCATCAATCAC +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACSHMTI*FPFINH
Trigger: GTGATTGATGAAGGGAAATCAAATCGTCATGTGGCT...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTAGCCACATGACGATTTaGTTTCCCTTCATCAATCAC +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFSHMTI*FPFINH
Trigger: GTGATTGATGAAGGGAAATCAAATCGTCATGTGGCT...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAGATACAGCTTCCCACTaGGCTTCTGCTCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRDTASH*ASAPFP
Trigger: TGGAAACGGAGCAGAAGCTCAGTGGGAAGCTGTATC...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGTTGGCTTTGTTGGTTaGTTTCATCATCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLVGFVG*FHHPCR
Trigger: ACGACAAGGATGATGAAATCAACCAACAAAGCCAAC...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCCACAGACTTGACTTCTaGTTTGATTTTGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLHRLDF*FDFADV
Trigger: TACATCAGCAAAATCAAATCAGAAGTCAAGTCTGTG...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLTSILR*HSTWRF
Trigger: GAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAACTTCATCTGCATCCTaGGTGTCAGGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRTSSAS*VSGSLS
Trigger: GGACAAGGAGCCTGACACTCAGGATGCAGATGAAGT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGTCTGATTTAGGTCTTTaGGCTCATCAATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLGRELVSETTGLQHAEKSDLGL*AHQWSS
Trigger: AGAAGACCATTGATGAGCTCAAAGACCTAAATCAGA...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTTCTGATTTAGGTCTTTaGGCTCATCAATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSDLGL*AHQWSS
Trigger: AGAAGACCATTGATGAGCTCAAAGACCTAAATCAGA...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTTCTGATTTAGGTCTTTaGGCTCATCAATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPSDLGL*AHQWSS
Trigger: AGAAGACCATTGATGAGCTCAAAGACCTAAATCAGA...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHASNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGGCTGTTGGTGTAACTaGTGCACTCAGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYGCWCN*CTQGSG
Trigger: CCCGGAGCCCTGAGTGCATCAGTTACACCAACAGCC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCTGGAGTAGATGTGGTTaGAGATGTCTCGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSWSRCG*RCLGQF
Trigger: GAATTGCCCGAGACATCTTCAACCACATCTACTCCA...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTTCTGGGTTCTGGTCATaGGCTCTGGGGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSSGFWS*ALGQGI
Trigger: TATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGA...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GGAGCGCTGACTGATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGGAATCAATCATTTTaGCTACACCTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: GALTDFVGRFLKLTGGIYRNQSF*LHLPVT
Trigger: GGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCT...GTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATCAGTCAGCGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCAAGGGCTCATTTGCTaGGGAGCCTTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWQGLIC*GAFEQS
Trigger: TGACTGTTCAAAGGCTCCTCAGCAAATGAGCCCTTG...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSLPSFP*VAALVQ
Trigger: CTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAA...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYGLFLG*RGGVCS
Trigger: GGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAGTGCGGAGATCACATTaGCCAGAGCTGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSVRRSH*PELTVT
Trigger: AGTCACTGTCAGCTCTGGGCAATGTGATCTCCGCAC...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATTGGAGGTTCTCCAGCTaGCGGCACCGCTTGACCACA +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNWRFSS*RHRLTT
Trigger: TGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCA...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGAGAAATGTCAGCTCCTaGAGCTTGGTGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWRNVSS*SLVLFS
Trigger: CGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCT...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCTTCGGGCTCCATTTCTaGACTTTTCTTGACTCGAGT +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFFGLHF*TFLDSS
Trigger: ACTCGAGTCAAGAAAAGTGCAGAAATGGAGCCCGAA...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREKMWLH*WYRSLQ
Trigger: TTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTT...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACTGAAAGTGCAGGTATaGAGCCGTGGGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLLKVQV*SRGCGR
Trigger: TCTCCCACACCCACGGCTGCATACCTGCACTTTCAG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCTGCTGGGAGCAGTCTaGCTCCTCCATTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVLLGAV*LLHFSK
Trigger: TTTTGAAAAATGGAGGAGGCAGACTGCTCCCAGCAG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCAGCCATTGACAGGCTaGTGGGAGCAGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYQPLTG*WEQSAS
Trigger: GGAGGCAGACTGCTCCCAGCAGCCTGTCAATGGCTG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGGTGATAGGCTGCCCTaGCGCTGGAGAATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIGDRLP*RWRILV
Trigger: GACCAAGATTCTCCAGCGGCAGGGCAGCCTATCACC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACTGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYWASAA*AYQLAF
Trigger: GAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTTGGGCCAGTGCAGCCTaGGCTTACCAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCWASAA*AYQLAF
Trigger: GAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGTGTCTACCCCACCGTTaGCCTCTTTTCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWCLPHR*PLFHEL
Trigger: CAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACA...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAATCTCTCTCCTCATCTaGGCTACACCCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLISLLI*ATPSHF
Trigger: GAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGAT...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACAGGCCAGGTGCCCCTTaGAGTGACCCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYRPGAP*SDPGSE
Trigger: TTCAGAGCCAGGGTCACTGCAAGGGGCACCTGGCCT...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACTCTTCCACGCTGGCATaGAACATTTTGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDSSTLA*NILADV
Trigger: CACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGA...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCAGGATGGGACACAGGTaGAGGCGTGAAGCAAACATC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLRMGHR*RREANI
Trigger: GATGTTTGCTTCACGCCTGCACCTGTGTCCCATCCT...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCGGACAGATTTGTCTTaGTCACATCCAGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVRTDLS*SHPEGH
Trigger: GTGACCTTCTGGATGTGACCAAGACAAATCTGTCCG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTACAACCCTTGACAAATaGCACCCGGTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSTTLDK*HPVLVL
Trigger: GAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAGAATCTCCTCCGGGCTaGACACAAAGCGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRESPPG*TQSVQY
Trigger: GTACTGAACGCTTTGTGTCCAGCCCGGAGGAGATTC...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTGAATCTCCTCCGGGCTaGACACAAAGCGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: VSSLSSSALHPHISLCVFESPPG*TQSVQY
Trigger: GTACTGAACGCTTTGTGTCCAGCCCGGAGGAGATTC...AAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTACATCAGGGTGGACTTaGTCTCTGCATCATTATAAC +
Preference number: 4 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFTSGWT*SLHHYN
Trigger: GTTATAATGATGCAGAGACCAAGTCCACCCTGATGT...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGATCATCCACCAGAAGCTaGTTCTGCTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRSSTRS*FCWLFS
Trigger: GGAGAAGAGCCAGCAGAACCAGCTTCTGGTGGATGA...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAACTCCAGGGACAGCATaGTGGCCACCTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLTPGTA*WPPSET
Trigger: TGTCTCAGAAGGTGGCCACCATGCTGTCCCTGGAGT...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLAIRFR*CPLTSC
Trigger: ACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGC...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGGGTGCCATAGGGGTTaGTGGGTGAGGATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNGCHRG*WVRMLG
Trigger: ACCCAGCATCCTCACCCACCAACCCCTATGGCACCC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLYLRWS*VWPAGR
Trigger: TCTACCTGCAGGCCACACCCAGCTCCACCTCAGATA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLMWLHC*YRSLQS
Trigger: ACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACAT...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTGCAGCTTTCCCTCCATaGTATGTGTTTTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLAAFPP*YVFSLR
Trigger: CCTCAGGGAAAACACATACCATGGAGGGAAAGCTGC...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCATTTTAAATCAGCTCTaGGTTCTGGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSILNQL*VLVMSS
Trigger: AGAGCTCATGACCAGAACCCAGAGCTGATTTAAAAT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTCCATTGACAGGCTGCTaGGAGCAGTCTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCPLTGC*EQSASS
Trigger: GGAGGAGGCAGACTGCTCCCAGCAGCCTGTCAATGG...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGAACAGGAACAGGTGGCATCTGCACACACTTTGGTTTACTGTCCTGTTCCTTTTCTCCTGGTTTGGAATaGCTAGTGACCTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: RTGTGGICTHFGLLSCSFSPGLE*LVTSIP
Trigger: AGGGATGGAGGTCACTAGCCATTCCAAACCAGGAGA...AAAGGAACAGGACAGTAAACCAAAGTGTGTGCAGATGCCACCTGTTCCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTCCTGCGCTTACCAGCTaGCATTCCCACTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIPALTS*HSHSAS
Trigger: GGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGG...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGAACAGGAACAGGTGGCATCTGCACACACTTTGGTTTACTGTCCTGTTCCTTTCAGAACAGGAACAGGTaGCATCTGCACACACTTTGG +
Preference number: 4 (lower is better)
Translates to: RTGTGGICTHFGLLSCSFQNRNR*HLHTLW
Trigger: CCAAAGTGTGTGCAGATGCCACCTGTTCCTGTTCTG...AAAGGAACAGGACAGTAAACCAAAGTGTGTGCAGATGCCACCTGTTCCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGATACAGCTTCCCACTaGGCTTCTGCTCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLDTASH*ASAPFP
Trigger: TGGAAACGGAGCAGAAGCTCAGTGGGAAGCTGTATC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACACTTCATCTGCATCCTaGGTGTCAGGCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNTSSAS*VSGSLS
Trigger: GGACAAGGAGCCTGACACTCAGGATGCAGATGAAGT...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTCTGATTTAGGTCTTTaGGCTCATCAATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVSDLGL*AHQWSS
Trigger: AGAAGACCATTGATGAGCTCAAAGACCTAAATCAGA...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCGTACCAGCTGTTTGTaGACCTTTGTAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSRTSCL*TFVSCS
Trigger: GGAACAGCTTACAAAGGTTCACAAACAGCTGGTACG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000676457.1
CDS-3UTR TCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTTGCAAAGTACATATCTaGGGTGGAGCTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLCKVHI*GGAGCG
Trigger: GCCACACCCAGCTCCACCTCAGATATGTACTTTGCA...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTGGTATGTGTTTTCCCTaGGGATGTCTGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLGMCFP*GCLSIS
Trigger: GCTTATGGACAGACATCCTCAGGGAAAACACATACC...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCAGATGAGCAGCCATTaGCAGGCTGCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYQMSSH*QAAGSS
Trigger: ACTGCTCCCAGCAGCCTGTCAATGGCTGCTCATCTG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTCAGCTTCCTTTCCTaGCTTAGAAGTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCLSFLS*LRSWVI
Trigger: TATCACCCAACTTCTAAGTCAGGAAAGGAAGCTGAG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTATGGTTACTCTGCTCTaGGAGTGTCCCTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCMVTLL*ECPCEI
Trigger: GATCTCACAGGGACACTCTCAGAGCAGAGTAACCAT...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCCAGTCTCTCTGTGGTaGAAGCCTCCCAATAACGAC +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINPVSLW*KPPNND
Trigger: GTCGTTATTGGGAGGCTTTCACCACAGAGAGACTGG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGTGCGGAGATCACATTaGCCAGAGCTGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLVRRSH*PELTVT
Trigger: AGTCACTGTCAGCTCTGGGCAATGTGATCTCCGCAC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGTATTTCTTCTTCCACTaGTCAGCAGTCAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWYFFFH*SAVNSK
Trigger: TTTGGAGTTGACTGCTGAGCAGTGGAAGAAGAAATA...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTATTTCTTCTTCCACTaGTCAGCAGTCAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETYFFFH*SAVNSK
Trigger: TTTGGAGTTGACTGCTGAGCAGTGGAAGAAGAAATA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTATCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SSRVLRSSASRSQPEASLSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR GCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCACTCACAACGCAGATCTaGATTGTCACGTACCAGCTG +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSLTTQI*IVTYQL
Trigger: CAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAG...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000676457.1
CDS-3UTR GCA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACAGTATGGAGGGTGCTaGATATGGGCTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLQYGGC*IWAENG
Trigger: GCCATTCTCAGCCCATATGCAGCACCCTCCATACTG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVSDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTTCTTCCACGCTGGCATaGAACATTTTGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLSSTLA*NILADV
Trigger: CACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGA...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTCGATGCGCACCACGATaGATGAGTTGTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCRCAPR*MSCHSQ
Trigger: CTGTGAATGACAACTCATCCATCGTGGTGCGCATCG...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTAGCTTCTCTATGAGTTaGCTTTGTTGGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: GRELVSETTGLQHAEKRPSFSMS*LCWLIS
Trigger: TGAAATCAACCAACAAAGCCAACTCATAGAGAAGCT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTTCATCCACCAGAAGCTaGTTCTGCTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLSSTRS*FCWLFS
Trigger: GGAGAAGAGCCAGCAGAACCAGCTTCTGGTGGATGA...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLAIRFR*CPLTSC
Trigger: ACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGC...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACAGGTTGTGGAGGGTCTaGAGTTCCCGGGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYRLWRV*SSRATV
Trigger: GACAGTTGCCCGGGAACTCCAGACCCTCCACAACCT...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTTATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIYLRWS*VWPAGR
Trigger: TCTACCTGCAGGCCACACCCAGCTCCACCTCAGATA...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNMQPWV*EISWLL
Trigger: CAGCAGCCAGCTAATCTCCCACACCCACGGCTGCAT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTCCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCCAGACTTTCTCTCCTaGTTTGGAATGGCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSPDFLS*FGMASD
Trigger: GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTATATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCTATTCCACACTCCACTaGTATTTTTCCCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSYSTLH*YFSPCS
Trigger: ACTGCAGGGGGAAAAATACCAGTGGAGTGTGGAATA...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGCAGAGGAGCCAGATTaGACCCCCTTCCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIAEEPD*TPFLRT
Trigger: TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
3UTR CAA 72 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQG*GRELVSETTGL
Trigger: CAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
3UTR CAA 72 bp AGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTaGACTACACCTGCCTGTAACCATCTCCATGGACAG +
Preference number: 4 (lower is better)
Translates to: SLFTPKPKESII*TTPACNHLHGQ
Trigger: CTGTCCATGGAGATGGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
3UTR CAA 72 bp GTTATCTATGTACACCAAGTAAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VIYVHQVNTHRG*RSLVCLPRWHA
Trigger: TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
3UTR CAA 72 bp GAGTGTCCCTGTGAGATCACAAACGGCAGGGACTATTaGTGTTTTACAGGAATACAGGGAAACTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ECPCEITNGRDY*CFTGIQGNSRP
Trigger: TGGCCTTGAGTTTCCCTGTATTCCTGTAAAACACAAATAGTCCCTGCCGTTTGTGATCTCACAGGGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
3UTR CAA 72 bp ATGTTCTCTGTGCCACTTCTGGGCCCTAAAGCAACCTaGGTGAGAAACCCAGTGACACACAAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: MFSVPLLGPKAT*VRNPVTHKNKE
Trigger: TTCTTTGTTCTTGTGTGTCACTGGGTTTCTCACCAAGGTTGCTTTAGGGCCCAGAAGTGGCACAGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACATCGGCAGAGCACCTTaGTGCTACATTCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINIGRAP*CYIRCW
Trigger: CCAACAACGAATGTAGCATCAAGGTGCTCTGCCGAT...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR TCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCATTGGTGACAGCCACATaGCGATTTGATTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSLVTAT*RFDFPS
Trigger: TGAAGGGAAATCAAATCGTCATGTGGCTGTCACCAA...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTGTTCATTCATGTTGGTaGCAGCCACATGACGATTTG +
Preference number: 4 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFVHSCW*QPHDDL
Trigger: CAAATCGTCATGTGGCTGTCACCAACATGAATGAAC...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACTGACAGTGACTTGTTaGTATTCTTTGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSLTVTC*YSLPRP
Trigger: TGGACGAGGCAAAGAATATCAACAAGTCACTGTCAG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTATTATAACTGGATGGTaGGCAACAGATGAACATAGT +
Preference number: 4 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETIITGW*ATDEHS
Trigger: ACTATGTTCATCTGTTGCTCACCATCCAGTTATAAT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTATTATAACTGGATGGTaGGCAACAGATGAACATAGT +
Preference number: 4 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFIITGW*ATDEHS
Trigger: ACTATGTTCATCTGTTGCTCACCATCCAGTTATAAT...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGTTGGCTTTGTTGGTTaGTTTCATCATCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVVGFVG*FHHPCR
Trigger: ACGACAAGGATGATGAAATCAACCAACAAAGCCAAC...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCGTTGGCTTTGTTGGTTaGTTTCATCATCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSVGFVG*FHHPCR
Trigger: ACGACAAGGATGATGAAATCAACCAACAAAGCCAAC...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCACAGACTTGACTTCTaGTTTGATTTTGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: LGALLVFFALQLLVVSLKHRLDF*FDFADV
Trigger: TACATCAGCAAAATCAAATCAGAAGTCAAGTCTGTG...CTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTATCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSRVLRSSASRSQPEASLSNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATTGCAAAGTACATATCTaGGGTGGAGCTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHCKVHI*GGAGCG
Trigger: GCCACACCCAGCTCCACCTCAGATATGTACTTTGCA...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTCTACCACCCCTGTGGTTCTAATCTACAGCGGCCAAGCTCACTTCTTTGGACACATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: VYHPCGSNLQRPSSLLWTHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...TGTCCAAAGAAGTGAGCTTGGCCGCTGTAGATTAGAACCACAGGGGTGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTGGTATGTGTTTTCCCTaGGGATGTCTGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFGMCFP*GCLSIS
Trigger: GCTTATGGACAGACATCCTCAGGGAAAACACATACC...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAAAGGTGAGGGGTGTATaGAGAAAATTATATGTCTCA +
Preference number: 4 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAKVRGV*RKLYVS
Trigger: TGAGACATATAATTTTCTTCATACACCCCTCACCTT...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGAAGGTGAGGGGTGTATaGAGAAAATTATATGTCTCA +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQKVRGV*RKLYVS
Trigger: TGAGACATATAATTTTCTTCATACACCCCTCACCTT...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAAGGAATCAATCATTTTaGCTACACCTGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLRNQSF*LHLPVT
Trigger: GGTTACAGGCAGGTGTAGTCAAAATGATTGATTCCT...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTGTGCTGCATATGGGCTaGGAATGGCTGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCVLHMG*EWLGED
Trigger: GTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCAC...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTGTACCTATTGTCATTaGTATCTGTGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: RELVSETTGLQHAEKRPQCTYCH*YLWHFH
Trigger: ATGGAAATGCCACAGATATCAATGACAATAGGTACA...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR GCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTTTCCCACTGAGCTTCTaGTCCGTTTCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLFPLSF*SVSMFS
Trigger: GGAGAACATGGAAACGGAGCAGAAGCTCAGTGGGAA...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCTATTTCTTCTTCCACTaGTCAGCAGTCAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFYFFFH*SAVNSK
Trigger: TTTGGAGTTGACTGCTGAGCAGTGGAAGAAGAAATA...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTTTAGCTCCACGCTCTaGATGTATTCCGTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLFSSTL*MYSVSE
Trigger: CTCGCTTACGGAATACATGCAGAGCGTGGAGCTAAA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCCTTCTTCACTTCATCTaGATCCTGAGTGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLLLHFI*ILSVRL
Trigger: GAGCCTGACACTCAGGATGCAGATGAAGTGAAGAAG...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIRSCLD*SCRSYR
Trigger: TCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCT...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATTCGGGCTCCATTTCTaGACTTTTCTTGACTCGAGT +
Preference number: 4 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVFGLHF*TFLDSS
Trigger: ACTCGAGTCAAGAAAAGTGCAGAAATGGAGCCCGAA...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGGGAGATTAGCTGGCTaGTGTCTCTTGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYGRLAG*CLLVER
Trigger: CCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGTCTACCCCACCGTTaGCCTCTTTTCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLCLPHR*PLFHEL
Trigger: CAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCCCTGGATTCTTAAGTaGCCTGCTGACAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSPWILK*PADSKY
Trigger: ATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTCATCATGGTTACTCTaGTCTGAGAGTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLSSWLL*SESVPV
Trigger: CACAGGGACACTCTCAGAGCAGAGTAACCATGATGA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTCCCCCGAGAGAGTCCTaGAGAATCCTTGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSPPRES*RILVIL
Trigger: CAAAATGACAAGGATTCTCCAGGACTCTCTCGGGGG...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTACATCAGGGTGGACTTaGTCTCTGCATCATTATAAC +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCTSGWT*SLHHYN
Trigger: GTTATAATGATGCAGAGACCAAGTCCACCCTGATGT...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGCTGCTGTCTCTTGGTaGAGAGGGAAAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYAAVSW*RGKSLA
Trigger: GGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIVWEIS*LLSLGG
Trigger: TCCACCAAGAGACAGCAGCCAGCTAATCTCCCACAC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
CDS-3UTR CCA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTATTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAAAAGAACCATGTGGTaGCAACATTACATAAAACCC +
Preference number: 4 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFKRTMW*QHYIKP
Trigger: GGGTTTTATGTAATGTTGCCACCACATGGTTCTTTT...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGAAAAGAACCATGTGGTaGCAACATTACATAAAACCC +
Preference number: 4 (lower is better)
Translates to: LVYPTVALFSMSCSFSAEKRTMW*QHYIKP
Trigger: GGGTTTTATGTAATGTTGCCACCACATGGTTCTTTT...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCAGGTCACTCCTGGAGGAAGAGACCCACCATGATCAGCTCCATAGAAATTAAATTTAATCATTTCTTCTaGTCCCACCCAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: AGHSWRKRPTMISSIEIKFNHFF*SHPENP
Trigger: TGGGTTCTCTGGGTGGGACCAGAAGAAATGATTAAA...TTTAATTTCTATGGAGCTGATCATGGTGGGTCTCTTCCTCCAGGAGTGACCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCCCTAAAGCTTACTGGTaGCATATACAGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVPKAYW*HIQMGR
Trigger: TCTTCCCATCTGTATATGCCACCAGTAAGCTTTAGG...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGATGGGAAGAGCATCTGCACACACTTTaGTTTACTGTCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DFVGRFLKLTGGIYRWEEHLHTL*FTVLFL
Trigger: AAGGAACAGGACAGTAAACCAAAGTGTGTGCAGATG...CTCTTCCCATCTGTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGATACAGCTTCCCACTaGGCTTCTGCTCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNDTASH*ASAPFP
Trigger: TGGAAACGGAGCAGAAGCTCAGTGGGAAGCTGTATC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCAGCAAGGACATCTTTaGCAATCTGCATGGCACATG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINQQGHL*QSAWHM
Trigger: CATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR TCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACGGTATGTGTTTTCCCTaGGGATGTCTGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINGMCFP*GCLSIS
Trigger: GCTTATGGACAGACATCCTCAGGGAAAACACATACC...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR TCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACATCTCCATGGACAGATaGGCAGCCATTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYISMDR*AAIDRL
Trigger: CAGCCTGTCAATGGCTGCTCATCTGTCCATGGAGAT...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACTTGCCCTCTTTTCCATaGGTTGCAGCTTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNLPSFP*VAALVQ
Trigger: CTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAA...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTAGTGACCTCCATCCCTaGAGTTACCTAGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSSDLHP*SYLENH
Trigger: GTGGTTTTCTAGGTAACTGCAGGGATGGAGGTCACT...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACTCTTCCACGCTGGCATaGAACATTTTGGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNSSTLA*NILADV
Trigger: CACATCTGCCAAAATGTTGCATGCCAGCGTGGAAGA...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAATACACACAGGGGGTTaGGCAGTTTGGTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLIHTGG*AVWFVF
Trigger: GAAGACAAACCAAACTGCGCAACCCCCTGTGTGTAT...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAATACACACAGGGGGTTaGGCAGTTTGGTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLIHTGG*AVWFVF
Trigger: GAAGACAAACCAAACTGCGCAACCCCCTGTGTGTAT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTATACACACAGGGGGTTaGGCAGTTTGGTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSIHTGG*AVWFVF
Trigger: GAAGACAAACCAAACTGCGCAACCCCCTGTGTGTAT...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGAATCTCCTCCGGGCTaGACACAAAGCGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYESPPG*TQSVQY
Trigger: GTACTGAACGCTTTGTGTCCAGCCCGGAGGAGATTC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTTGCTGTCACGATATaGAACATAGCTTTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VREDIKHSTVQQQGLGREFAVTI*NIAFSA
Trigger: GGCACTAAAAGCTATGTTCCATATCGTGACAGCAAA...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTTTGCTGTCACGATATaGAACATAGCTTTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVFAVTI*NIAFSA
Trigger: GGCACTAAAAGCTATGTTCCATATCGTGACAGCAAA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACTCTTGAGTCGTGTTTaGGGGGAATACACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLLLSRV*GEYTVK
Trigger: TTTGACCGTGTATTCCCCCCAAACACGACTCAAGAG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCTCTTGAGTCGTGTTTaGGGGGAATACACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSLLSRV*GEYTVK
Trigger: TTTGACCGTGTATTCCCCCCAAACACGACTCAAGAG...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCTCTTGAGTCGTGTTTaGGGGGAATACACGGTCAAA +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINLLSRV*GEYTVK
Trigger: TTTGACCGTGTATTCCCCCCAAACACGACTCAAGAG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAGAAGAAAAAGGGAAATaGTCCCTTGAGCAACCCATT +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSEEKGK*SLEQPI
Trigger: AATGGGTTGCTCAAGGGACCATTTCCCTTTTTCTTC...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGCATGCCGCCCAGTATaGAACAAGAAAGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLACRPV*NKKEIQ
Trigger: CTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTATTTTGCCAATGAGCTaGAAGCCCCCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIILPMS*KPPNQG
Trigger: CCCTTGGTTTGGGGGCTTCCAGCTCATTGGCAAAAT...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTTTACATAAAACCCCCTaGATTCTTAAGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: APCGRKGPSETKTTVLFSLHKTP*ILKCPA
Trigger: AGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAA...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTCCTGGTTTACTATTCTaGGAAACCCCTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCPGLLF*ETPGEG
Trigger: GCCCTCTCCAGGGGTTTCCCAGAATAGTAAACCAGG...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAAGTAAGAAACCTCCATaGTATGTGTTTTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSSKKPP*YVFSLR
Trigger: CCTCAGGGAAAACACATACCATGGAGGTTTCTTACT...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676457.1
CDS-3UTR CCA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTATTCTTCTTTCTCCCATaGCATCTGAAGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SSRVLRSSASRSQPEASLFFFLP*HLKVLK
Trigger: TTTGAGAACCTTCAGATGCCATGGGAGAAAGAAGAA...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR TCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATATCGGCAGAGCACCTTaGTGCTACATTCGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNIGRAP*CYIRCW
Trigger: CCAACAACGAATGTAGCATCAAGGTGCTCTGCCGAT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCAGCCACATGACGATTTaGTTTCCCTTCATCAATCAC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLSHMTI*FPFINH
Trigger: GTGATTGATGAAGGGAAATCAAATCGTCATGTGGCT...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCACAGACTTGACTTCTaGTTTGATTTTGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCHRLDF*FDFADV
Trigger: TACATCAGCAAAATCAAATCAGAAGTCAAGTCTGTG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTAGGGAAATGGTCCCTTaGGCAACCCATTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCREMVP*ATHFSV
Trigger: GACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCT...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTATCATCCACCTGTTTGTaGACCTTTGTAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLSSTCL*TFVSCS
Trigger: GGAACAGCTTACAAAGGTTCACAAACAGGTGGATGA...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATAGAAATGTCAGCTCCTaGAGCTTGGTGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNRNVSS*SLVLFS
Trigger: CGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTCTTGAACGAACAGCTTaGGAAGGTTGTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCLERTA*EGCGGS
Trigger: AGACCCTCCACAACCTTCGCAAGCTGTTCGTTCAAG...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCTTGAACGAACAGCTTaGGAAGGTTGTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYLERTA*EGCGGS
Trigger: AGACCCTCCACAACCTTCGCAAGCTGTTCGTTCAAG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATTCGGGCTCCATTTCTaGACTTTTCTTGACTCGAGT +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLFGLHF*TFLDSS
Trigger: ACTCGAGTCAAGAAAAGTGCAGAAATGGAGCCCGAA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATCTCACAACGCAGATCTaGATTGTCACGTACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNLTTQI*IVTYQL
Trigger: CAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAG...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000676457.1
CDS-3UTR GCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHKMWLH*WYRSLQ
Trigger: TTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTT...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTATCTCTCTCCTCATCTaGGCTACACCCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIISLLI*ATPSHF
Trigger: GAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGAT...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATACAACCCTTGACAAATaGCACCCGGTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNTTLDK*HPVLVL
Trigger: GAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCCCCCGAGAGAGTCCTaGAGAATCCTTGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYPPRES*RILVIL
Trigger: CAAAATGACAAGGATTCTCCAGGACTCTCTCGGGGG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGCAATCGTCTCCTTCTaGGCCTTTGTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNAIVSF*AFVFSF
Trigger: GAAGGAGAAGACAAAGGCCCAGAAGGAGACGATTGC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATCGATGCGCACCACGATaGATGAGTTGTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNRCAPR*MSCHSQ
Trigger: CTGTGAATGACAACTCATCCATCGTGGTGCGCATCG...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACAGCTTCTCTATGAGTTaGCTTTGTTGGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDSFSMS*LCWLIS
Trigger: TGAAATCAACCAACAAAGCCAACTCATAGAGAAGCT...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGCAGCTTTCCCTCCATaGTATGTGTTTTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNAAFPP*YVFSLR
Trigger: CCTCAGGGAAAACACATACCATGGAGGGAAAGCTGC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CCA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCAAAAGAACCATGTGGTaGCAACATTACATAAAACCC +
Preference number: 4 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSKRTMW*QHYIKP
Trigger: GGGTTTTATGTAATGTTGCCACCACATGGTTCTTTT...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGATTATAACTGGATGGTaGGCAACAGATGAACATAGT +
Preference number: 4 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWIITGW*ATDEHS
Trigger: ACTATGTTCATCTGTTGCTCACCATCCAGTTATAAT...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACTGGAGTAGATGTGGTTaGAGATGTCTCGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYWSRCG*RCLGQF
Trigger: GAATTGCCCGAGACATCTTCAACCACATCTACTCCA...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTTTTAGCTCCACGCTCTaGATGTATTCCGTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCFSSTL*MYSVSE
Trigger: CTCGCTTACGGAATACATGCAGAGCGTGGAGCTAAA...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTTTCGGGCTCCATTTCTaGACTTTTCTTGACTCGAGT +
Preference number: 4 (lower is better)
Translates to: QHYIKPPGFLSALLTANIFGLHF*TFLDSS
Trigger: ACTCGAGTCAAGAAAAGTGCAGAAATGGAGCCCGAA...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAAATCTGCATGGCACATaGATGATAAACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRNLHGT*MINLLL
Trigger: CAAGAGCAAGTTTATCATGCATGTGCCATGCAGATT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTTCTGGTCATGAGCTCTaGGGCAGGGAATATCAAAAG +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCSGHEL*GREYQK
Trigger: CTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGA...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGTTCATTCATGTTGGTaGCAGCCACATGACGATTTG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNVHSCW*QPHDDL
Trigger: CAAATCGTCATGTGGCTGTCACCAACATGAATGAAC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAATTATAACTGGATGGTaGGCAACAGATGAACATAGT +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSIITGW*ATDEHS
Trigger: ACTATGTTCATCTGTTGCTCACCATCCAGTTATAAT...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATGTTGGCTTTGTTGGTTaGTTTCATCATCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHVGFVG*FHHPCR
Trigger: ACGACAAGGATGATGAAATCAACCAACAAAGCCAAC...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCACACAGACTTGACTTCTaGTTTGATTTTGCTGATGTA +
Preference number: 4 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSHRLDF*FDFADV
Trigger: TACATCAGCAAAATCAAATCAGAAGTCAAGTCTGTG...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCCATAGCAGCAGCTTTTaGTATATAGATACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLHSSSF*YIDTEY
Trigger: GTACTCTGTATCTATATATCAAAAGCTGCTGCTATG...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATATTTCTTCTTCCACTaGTCAGCAGTCAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLYFFFH*SAVNSK
Trigger: TTTGGAGTTGACTGCTGAGCAGTGGAAGAAGAAATA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATTGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGT +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNWSSIC*LSFSMS
Trigger: ACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCA...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNSSMVF*FSLISS
Trigger: GGACGAGATCAACGAGAAGCAGAAGACCATTGATGA...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACAATCTGCATGGCACATaGATGATAAACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: IVASKDIFDNLHGTCMINNLHGT*MINLLL
Trigger: CAAGAGCAAGTTTATCATGCATGTGCCATGCAGATT...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR GCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTGCTAAGACATTCTTCTaGTTAAGGCTTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSAKTFF*LRLCVC
Trigger: ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGC...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTCTCTTTTCCATGAGTTaGAGCTTTAGTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCLFSMS*SFSAEE
Trigger: CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAG...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTTTTGCTGTCACGATATaGAACATAGCTTTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: IKPPGFLSALLTANISLSFAVTI*NIAFSA
Trigger: GGCACTAAAAGCTATGTTCCATATCGTGACAGCAAA...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAATTTTAAATCAGCTCTaGGTTCTGGTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLILNQL*VLVMSS
Trigger: AGAGCTCATGACCAGAACCCAGAGCTGATTTAAAAT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACCCTTCCTCAGAACAATaGTTTTCAAACTACTCCACA +
Preference number: 4 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNPSSEQ*FSNYST
Trigger: TGTGGAGTAGTTTGAAAACCATTGTTCTGAGGAAGG...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CCA 90 bp ACATTCTTCTGCTTAAGGCTTTGTGTGTGTGCATGCGTGTGTGCATGTTTGTGTAAAAGAACCATGTGGTaGCAACATTACATAAAACCC +
Preference number: 4 (lower is better)
Translates to: TFFCLRLCVCACVCACLCKRTMW*QHYIKP
Trigger: GGGTTTTATGTAATGTTGCCACCACATGGTTCTTTT...ACACAAACATGCACACACGCATGCACACACACAAAGCCTTAAGCAGAAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTAAACATCGCCTTAACTaGAGATGTCTTAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFKHRLN*RCLSSK
Trigger: TTTGGAACTAAGACATCTCCAGTTAAGGCGATGTTT...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CCA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATTTCCTAAAGCTTACTaGTGGCATATACAGATGGGA +
Preference number: 4 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLFPKAY*WHIQMG
Trigger: TCCCATCTGTATATGCCACCAGTAAGCTTTAGGAAA...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR TCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATTCTAACTGGAGCTTCTaGTTTAGGTCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNSNWSF*FRSLSS
Trigger: TGAGCTCAAAGACCTAAATCAGAAGCTCCAGTTAGA...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp GAATTATATTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCAAAGTAAGAAACCTTaGTGTGGAACTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ELYFPYILLKRRLLPLCHQSKKP*CGTQGS
Trigger: AGAACCTTGAGTTCCACATCAAGGTTTCTTACTTTG...ATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATATAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR TCA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTAAGGTGAGGGGTGTATaGAGAAAATTATATGTCTCA +
Preference number: 4 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSKVRGV*RKLYVS
Trigger: TGAGACATATAATTTTCTTCATACACCCCTCACCTT...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR GCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGTTTCCATGTTCTCCTaGTTGATGTTGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNVSMFS*LMLMRK
Trigger: CTTCCTCATCAACATCAAGCAGGAGAACATGGAAAC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CCA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATACATCAGGGTGGACTTaGTCTCTGCATCATTATAAC +
Preference number: 4 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNTSGWT*SLHHYN
Trigger: GTTATAATGATGCAGAGACCAAGTCCACCCTGATGT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR TCA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACTGTGAGACGAGTAGATaGGAAAGAAGAAACATTCAC +
Preference number: 4 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYCETSR*ERRNIH
Trigger: GTGAATGTTTCTTCTTTCTCATCTACTCGTCTCACA...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR GCA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTAATCTGCATGGCACATaGATGATAAACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCNLHGT*MINLLL
Trigger: CAAGAGCAAGTTTATCATGCATGTGCCATGCAGATT...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS GCA 90 bp GGGAGCAGGGCCGGGGCGCGCTGTCTCTCTCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTGGTCCTTTCGGGCTCTCTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSRAGARCLSPAAAG*GRPGRLVLSGSLPL
Trigger: GAGAGGCAGAGAGCCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGGAGAGAGACAGCGCGCCCCGGCCCTGCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS TCA 90 bp AGCTGGCAGGATGAGAGCTCCCGCCCGGTCACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTCTCCAGCTGCCGGCACCGCTTGACC +
Preference number: 5 (lower is better)
Translates to: SWQDESSRPVTSILR*HSTWRFSSCRHRLT
Trigger: GGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675299.1
ENST00000675629.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676352.1
ENST00000676457.1
CDS GCA 90 bp GTTGTCATTCACAGGGGTCTCCTCACAGAGCTCGGCTCCCAGGGCTaGCTCCTCCCCAGCCAGGCGCTCTGTCTCAGGCACATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VVIHRGLLTELGSQG*LLPSQALCLRHILS
Trigger: GGAGAGAATGTGCCTGAGACAGAGCGCCTGGCTGGGGAGGAGGCAGCCCTGGGAGCCGAGCTCTGTGAGGAGACCCCTGTGAATGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS TCA 90 bp CTCGTATTTCTGCCGCTCCTCGGGCGCGATGCGCACCACGATGGATaGGTTGTCATTCACAGGGGTCTCCTCACAGAGCTCGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LVFLPLLGRDAHHDG*VVIHRGLLTELGSQ
Trigger: CTGGGAGCCGAGCTCTGTGAGGAGACCCCTGTGAATGACAACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGCGGCAGAAATACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS TCA 90 bp CGAGCGGATCTTGGCCTCATGCTGAGAGATGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCACTTCCATCTTGCGGTGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: RADLGLMLRDEELAG*ELPPGHFHLAVTLH
Trigger: GTGGAGTGTCACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTCATCTCTCAGCATGAGGCCAAGATCCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 90 bp GACGGCGGATCTCCTCCTCGTATTTCTGCCGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGTTGTCATTCACAGGGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: DGGSPPRISAAPRAR*APRWMSCHSQGSPH
Trigger: GTGAGGAGACCCCTGTGAATGACAACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGAGATCCGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 90 bp CCTCCTCGTATTTCTGCCGCTCCTCGGGCGCGATGCGCACCACGATaGATGAGTTGTCATTCACAGGGGTCTCCTCACAGAGCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: PPRISAAPRARCAPR*MSCHSQGSPHRARL
Trigger: GAGCCGAGCTCTGTGAGGAGACCCCTGTGAATGACAACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVRWTFS*SPRVDT
Trigger: GGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCG...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: HGPVQPALTSWHSHSASFRWTFS*SPRVDT
Trigger: GGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCG...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGCTGGTACCGGCGCTaGTCCTTCATGGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RWSWVWPAGRDSGSSGRGCWYRR*SFMAPS
Trigger: GGAGGGCGCCATGAAGGACAAGCGCCGGTACCAGCA...GCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CAA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGC +
Preference number: 5 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSVAQFG*SSTLAC
Trigger: GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAAC...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS GCA 90 bp TCAGCAATTCGTTTTCGCTGGTGTCCACTGACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGACAGCATGGTGGCCTGGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: SAIRFRWCPLTSCSR*NSDSRDSMVAWGQP
Trigger: GGGCTGTCCCCAGGCCACCATGCTGTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676242.1
CDS CCA 90 bp TCCTTAGCGGCATCGTTCTCTGATTGCAGGTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCTCGGGTGGACACCAGCAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLAASFSDCRWLSSR*TFSLSPRVDTSSSS
Trigger: GGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCTAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAATCCTGGGCCTGGAGCTaGGCCAGCTCATCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQESWAWS*ASSSLK
Trigger: CTTGAGCGATGAGCTGGCCAAGCTCCAGGCCCAGGA...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCAGGGGGTTGCGCAGTTaGGTTTGTCTTCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSRGLRS*VCLPRW
Trigger: CCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS GCA 90 bp CAAGGGGCCGCCAGAAGATGTGGCTCCACTGCTGGTACAGGAGTTTaGAAAGCTGGATGGAGCAGAGGAAAGAGGCAGCCTCTGACACCC +
Preference number: 5 (lower is better)
Translates to: QGAARRCGSTAGTGV*KAGWSRGKRQPLTP
Trigger: GGGTGTCAGAGGCTGCCTCTTTCCTCTGCTCCATCCAGCTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552227.1
ENST00000675882.1
CDS CCA 90 bp TCCTTAGCGGCATCGTTCTCTGATTGCAGGTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCTCGGGTGGACACCAGCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SLAASFSDCRWLSSR*TFSLSPRVDTSSFK
Trigger: CTTGAAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCTAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 90 bp GCAGCCACCATACAGCCCTGGAAGGATGCAGAGGTCCCCTCGACATaGGAGATGTTCTGTGGTCAGGGAGCTGTTGGACCATTGGCACAC +
Preference number: 5 (lower is better)
Translates to: AATIQPWKDAEVPST*EMFCGQGAVGPLAH
Trigger: GTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGGGGACCTCTGCATCCTTCCAGGGCTGTATGGTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 90 bp CAGTGGGATGGAGGTATAAGAAGGCCTCACCCTGGGCCTGGAGCTTaGCCAGCTCATCGCTCAAGGAGTCATAGGACTCTTCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: QWDGGIRRPHPGPGA*PAHRSRSHRTLPGA
Trigger: GGCACCTGGAAGAGTCCTATGACTCCTTGAGCGATGAGCTGGCCAAGCTCCAGGCCCAGGGTGAGGCCTTCTTATACCTCCATCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSGLGLF*GCRGGV
Trigger: CACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCC...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGTCAGCTCCTGCAGCTaGGTGCTCTTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLVSSCS*VLFSCS
Trigger: AGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGAC...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGAACAGCTTGCGAAGGTaGTGGAGGGTCTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLNSLRR*WRVWSS
Trigger: GGAACTCCAGACCCTCCACAACCTTCGCAAGCTGTT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS GCA 90 bp TCCCGGGCAACTGTCTCCTCCAGACCCTTGAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGAAATGTCAGCTCCTGCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SRATVSSRPLRSCLD*SCRSYRNVSSCSLV
Trigger: CACCAAGCTGCAGGAGCTGACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 90 bp GTCTGGAGTTCCCGGGCAACTGTCTCCTCCAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGCTCGTACAGAAATGTCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VWSSRATVSSRPLRS*LDCSCRSYRNVSSC
Trigger: GCAGGAGCTGACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCGGGAACTCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 90 bp GCCCTGGAAGGATGCAGAGGTCCCCTCGACATGGGAGATGTTCTGTaGTCAGGGAGCTGTTGGACCATTGGCACACCACTTACCACCTTC +
Preference number: 5 (lower is better)
Translates to: ALEGCRGPLDMGDVL*SGSCWTIGTPLTTF
Trigger: GAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGGGGACCTCTGCATCCTTCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 90 bp ACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: TPESAGMQPWVWEIS*LLSLGGEGKAWPGP
Trigger: AGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS CCA 90 bp GGCACTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GTESAGMQPWVWEIS*LLSLGGEGKAWPGP
Trigger: AGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674980.1
CDS CCA 90 bp CCTCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: PPESAGMQPWVWEIS*LLSLGGEGKAWPGP
Trigger: AGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675433.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLGLGLF*GCRGGV
Trigger: CACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCC...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCAATCGGCAGAGCACCTaGATGCTACATTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSNRQST*MLHSLL
Trigger: CAACAACGAATGTAGCATCAAGGTGCTCTGCCGATT...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAATGGCACCCGGTTCTaGTCCTCGTGCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQENGTRF*SSCTDR
Trigger: TCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTAACAGCTTGCGAAGGTaGTGGAGGGTCTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLNSLRR*WRVWSS
Trigger: GGAACTCCAGACCCTCCACAACCTTCGCAAGCTGTT...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTATGCTGGTACCGGCGCTaGTCCTTCATGGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLCWYRR*SFMAPS
Trigger: GGAGGGCGCCATGAAGGACAAGCGCCGGTACCAGCA...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATGCTGGTACCGGCGCTaGTCCTTCATGGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHACWYRR*SFMAPS
Trigger: GGAGGGCGCCATGAAGGACAAGCGCCGGTACCAGCA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: ESWASAACAYQLAFPLSFVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCCCAGCAAGGACATCTTaGACAATCTGCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSPARTS*TICMAH
Trigger: ATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGG...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676437.1
ENST00000676457.1
CDS TCA 90 bp TTCTCAAACTTAGGCACTCACCTGAGAGATGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCACTTCCATCTTGCGGTGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: FSNLGTHLRDEELAG*ELPPGHFHLAVTLH
Trigger: GTGGAGTGTCACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTCATCTCTCAGGTGAGTGCCTAAGTTTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS GCA 90 bp CCTTCTGGTAGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAAAGCTGGATGGAGCAGAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PSGRKPRGRQKMWLH*WYRSLQSWMEQRKE
Trigger: CTCTTTCCTCTGCTCCATCCAGCTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTTCCTACCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552227.1
ENST00000675882.1
CDS CCA 90 bp TGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTaGCCTGGTCCTCAGCCTCATAGCCACACGGCAGGTCACTCCTAT +
Preference number: 5 (lower is better)
Translates to: WEISWLLSLGGEGKA*PGPQPHSHTAGHSY
Trigger: ATAGGAGTGACCTGCCGTGTGGCTATGAGGCTGAGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS CCA 90 bp TCTGGTAGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGCTGGATGGAGCAGAGGAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SGRKPRGRQKMWLHC*YRSLQSWMEQRKEA
Trigger: TGCCTCTTTCCTCTGCTCCATCCAGCTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTTCCTACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552227.1
ENST00000675882.1
CDS CCA 90 bp TGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTaGCCTGGTCCTCAGCCTCATAGCCACACGGCAGGTCACTCCTTA +
Preference number: 5 (lower is better)
Translates to: WEISWLLSLGGEGKA*PGPQPHSHTAGHSL
Trigger: TAAGGAGTGACCTGCCGTGTGGCTATGAGGCTGAGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675201.1
ENST00000676265.1
CDS CCA 90 bp CTCACCAAGGAGAGGAAAAGGGAACTGGAAGGCAAGGGCTGGGATTaGCGTGGTAATAGGAGGAATCCACTCCCAGGCAGCCTGAGACCT +
Preference number: 5 (lower is better)
Translates to: LTKERKRELEGKGWD*RGNRRNPLPGSLRP
Trigger: AGGTCTCAGGCTGCCTGGGAGTGGATTCCTCCTATTACCACGCCAATCCCAGCCCTTGCCTTCCAGTTCCCTTTTCCTCTCCTTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675737.1
CDS CCA 90 bp TGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTaGCCTGGTCCTCAGCCTCATAGCCACACGGCAGGTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: WEISWLLSLGGEGKA*PGPQPHSHTAGHSI
Trigger: AATGGAGTGACCTGCCGTGTGGCTATGAGGCTGAGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675697.1
CDS-3UTR CAA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTACCACGATGGATGAGTaGTCATTCACAGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HGPVQPALTSWHSHSASFTTMDE*SFTGVS
Trigger: GGAGACCCCTGTGAATGACAACTCATCCATCGTGGT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFRWTFS*SPRVDT
Trigger: GGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCG...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCCTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSLLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQEQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS TCA 90 bp TGGTCAGGGAGCTGTTGGACCATTGGCACACCACTTACCACCTTCTaGGACAGCTCATCCACCAGAAGCTGGTTCTGCTGGCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WSGSCWTIGTPLTTF*DSSSTRSWFCWLFS
Trigger: GGAGAAGAGCCAGCAGAACCAGCTTCTGGTGGATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS TCA 90 bp CCGCTGTCATCCCTACCCCTTGAGACATGGGAACTGACATACTGTTaGCTCACGGGGCAGGTGGAGGAGAAAGGACAGAACCCTGACATC +
Preference number: 5 (lower is better)
Translates to: PLSSLPLETWELTYC*LTGQVEEKGQNPDI
Trigger: GATGTCAGGGTTCTGTCCTTTCTCCTCCACCTGCCCCGTGAGTCAACAGTATGTCAGTTCCCATGTCTCAAGGGGTAGGGATGACAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS TCA 90 bp CCATGGCATCTGAAGGTTCTCAAACTTAGGCACTCACCTGAGAGATaGGGAGCTGGCAGGATGAGAGCTCCCGCCCGGTCACTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PWHLKVLKLRHSPER*GAGRMRAPARSLPS
Trigger: AGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTCATCTCTCAGGTGAGTGCCTAAGTTTGAGAACCTTCAGATGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS GCA 90 bp CCTTCTGGTAGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAAAGTACATATCTGAGGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSGRKPRGRQKMWLH*WYRSLQSTYLRWSW
Trigger: CCAGCTCCACCTCAGATATGTACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTTCCTACCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 90 bp AGATCCTTCATCAGCCCGTTCAGCACCTCAGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGTAGCCGCTGCAACTCAGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: RSFISPFSTSAIRFR*CPLTSCSRCNSDSR
Trigger: CCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGCTGAGGTGCTGAACGGGCTGATGAAGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676242.1
ENST00000676457.1
CDS CCA 90 bp GAAACTGAAAGTGCAGGTATGCAGCCGTGGGTGTGGGAGATTAGCTaGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCTTGGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: ETESAGMQPWVWEIS*LLSLGGEGKAWPGP
Trigger: AGGACCAGGCCAAGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675737.1
ENST00000675882.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 90 bp CAATACAGCAAGGTGACAGGACCCGGGAGGGGCTGGAGTCGCCCTTaGGAACCCTTACTCTTTGAGCTCATCAATGGTCTTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QYSKVTGPGRGWSRP*EPLLFELINGLLLL
Trigger: GAGAAGCAGAAGACCATTGATGAGCTCAAAGAGTAAGGGTTCCCAAGGGCGACTCCAGCCCCTCCCGGGTCCTGTCACCTTGCTGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 90 bp GGACATGTGAGTCAATACAGCAAGGTGACAGGACCCGGGAGGGGCTaGAGTCGCCCTTGGGAACCCTTACTCTTTGAGCTCATCAATGGT +
Preference number: 5 (lower is better)
Translates to: GHVSQYSKVTGPGRG*SRPWEPLLFELING
Trigger: ACCATTGATGAGCTCAAAGAGTAAGGGTTCCCAAGGGCGACTCCAGCCCCTCCCGGGTCCTGTCACCTTGCTGTATTGACTCACATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 90 bp CATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: HVTVTPESAGMQPWV*EISWLLSLGGEGKA
Trigger: AGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS CCA 90 bp TTTGGACATGTGACAGTGACCCCTGAAAGTGCAGGTATGCAGCCGTaGGTGTGGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: FGHVTVTPESAGMQP*VWEISWLLSLGGEG
Trigger: TCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCACTGTCACATGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS CCA 90 bp CCAATAACTGCCCCCACCCTATGCCTTCTAGGGTCCAGGGAGCTTTaGGTGGGACTCCAACCCACACGTGTGGTCACTCACTACATATCT +
Preference number: 5 (lower is better)
Translates to: PITAPTLCLLGSREL*VGLQPTRVVTHYIS
Trigger: AGATATGTAGTGAGTGACCACACGTGTGGGTTGGAGTCCCACCCAAAGCTCCCTGGACCCTAGAAGGCATAGGGTGGGGGCAGTTATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS-3UTR CAA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTTTGATGCTACATTCGTaGTTGGTCTCCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: HGPVQPALTSWHSHSASFLMLHS*LVSAMV
Trigger: CACCATGGCGGAGACCAACAACGAATGTAGCATCAA...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCACGGACAGATTTGTCTaGGTCACATCCAGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSTDRFV*VTSRRS
Trigger: TGACCTTCTGGATGTGACCAAGACAAATCTGTCCGT...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTAATGGCACCCGGTTCTaGTCCTCGTGCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: GRELVSETTGLQHAEKRPNGTRF*SSCTDR
Trigger: TCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATT...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTCCCTCTGCTCCAGTCTaGCTGACCTTCTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPPSAPV*LTFSLP
Trigger: AGGGAGTGAGAAGGTCAGCAAGACTGGAGCAGAGGG...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: LLQLGALLVFFALQLLVVSCRHR*TTDLTS
Trigger: AGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCT...GACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR CAA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNSCRHR*TTDLTS
Trigger: AGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCT...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTCCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCG +
Preference number: 5 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVPLRSC*DCSCRS
Trigger: CGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGG...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGCCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCG +
Preference number: 5 (lower is better)
Translates to: RELVSETTGLQHAEKRPQPLRSC*DCSCRS
Trigger: CGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGG...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGTGCCCCTTGCAGTGACCCTGGCTCTGAAAGGGATGCGGTGAAGGTGGGGAGCGTAAGCTGTTCCAGGTaGTTCTCAAGAAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: GAPCSDPGSERDAVKVGSVSCSR*FSRKEI
Trigger: GATTTCCTTTCTTGAGAACAACCTGGAACAGCTTAC...GCTCCCCACCTTCACCGCATCCCTTTCAGAGCCAGGGTCACTGCAAGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTGGAGACAGCATGGCTaGTCTACCCCACCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLWRQHG*STPPLP
Trigger: GGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCA...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATGGAGACAGCATGGCTaGTCTACCCCACCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAWRQHG*STPPLP
Trigger: GGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTGGAGACAGCATGGCTaGTCTACCCCACCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: RELVSETTGLQHAEKRPQWRQHG*STPPLP
Trigger: GGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCA...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS TCA 90 bp GCAGAAGAGTCTGAAAGACAGAGGGACTGTGAGGGGAAAGTGCAGTaGCAGGGTTGGGGAGGGACTCACAATGCACTGAACAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: AEESERQRDCEGKVQ*QGWGGTHNALNSSA
Trigger: TGCACTGCTGTTCAGTGCATTGTGAGTCCCTCCCCAACCCTGTCACTGCACTTTCCCCTCACAGTCCCTCTGTCTTTCAGACTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS TCA 90 bp TTGGGTGGGACTCCAACCCACACGTGTGGTCACTCACTACATATCTaGGGTGGAGCTGGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LGGTPTHTCGHSLHI*GGAGCGLQVEILVV
Trigger: AACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTAGTGAGTGACCACACGTGTGGGTTGGAGTCCCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS CCA 90 bp CCTCGACATGGGAGATGTTCTGTGGTCAGGGAGCTGTTGGACCATTaGCACACCACTTACCACCTTCTGAGACAGCTCATCCACCAGAAG +
Preference number: 5 (lower is better)
Translates to: PRHGRCSVVRELLDH*HTTYHLLRQLIHQK
Trigger: CTTCTGGTGGATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 90 bp CTTCAACTTGAGGGCACTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LQLEGTESAGMQPWV*EISWLLSLGGEGKA
Trigger: AGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTGCCCTCAAGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674980.1
CDS CCA 90 bp CCACACGTGTGGTCACTCACTACATATCTGAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PHVWSLTTYLRWSWV*PAGRDSGSSGRGCW
Trigger: CCAACAGCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTAGTGAGTGACCACACGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS CCA 90 bp TCCAACCCACACGTGTGGTCACTCACTACATATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: SNPHVWSLTTYLRWS*VWPAGRDSGSSGRG
Trigger: GCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTAGTGAGTGACCACACGTGTGGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS-3UTR CAA 90 bp CATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTACGGACAGATTTGTCTaGGTCACATCCAGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: HGPVQPALTSWHSHSASFTDRFV*VTSRRS
Trigger: TGACCTTCTGGATGTGACCAAGACAAATCTGTCCGT...AAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAACGTGCACGGACAGATTaGTCTTGGTCACATCCAGAA +
Preference number: 5 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQERARTD*SWSHPE
Trigger: TTCTGGATGTGACCAAGACAAATCTGTCCGTGCACG...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAATGGCACCCGGTTCTaGTCCTCGTGCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWNGTRF*SSCTDR
Trigger: TCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTCCATGTTCTCCTGCTaGATGTTGATGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WASAACAYQLAFPLSFLSSMFSC*MLMRKM
Trigger: CATCTTCCTCATCAACATCAAGCAGGAGAACATGGA...GGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTACCCTCTGCTCCAGTCTaGCTGACCTTCTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLPSAPV*LTFSLP
Trigger: AGGGAGTGAGAAGGTCAGCAAGACTGGAGCAGAGGG...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCCCCTCTGCTCCAGTCTaGCTGACCTTCTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFPSAPV*LTFSLP
Trigger: AGGGAGTGAGAAGGTCAGCAAGACTGGAGCAGAGGG...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGGCTGACAGTGACTTGTaGATATTCTTTGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVADSDL*IFFASS
Trigger: GGACGAGGCAAAGAATATCAACAAGTCACTGTCAGC...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCCTTTCCTGAGAGCTGACAGTGACTaGTTGATATTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: GQCSLRLPAGIPTQLPFLRADSD*LIFFAS
Trigger: CGAGGCAAAGAATATCAACAAGTCACTGTCAGCTCT...CAGGAAAGGAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTCAGCTTCAGTCCTGGAGAATCCTaGTCATTTTGCTGTCACGAT +
Preference number: 5 (lower is better)
Translates to: ESWASAACAYQLAFPLSFSPGES*SFCCHD
Trigger: ATCGTGACAGCAAAATGACAAGGATTCTCCAGGACT...GAAGCTGAGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCATCCAGCATTTGCTGCTaGAGCTTCTCTATGAGTTGG +
Preference number: 5 (lower is better)
Translates to: SLKESWASAACAYQLAFPSSICC*SFSMSW
Trigger: CCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGA...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWSCRHR*TTDLTS
Trigger: AGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTTCCTGGGCCTGGAGCTaGGCCAGCTCATCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCSWAWS*ASSSLK
Trigger: CTTGAGCGATGAGCTGGCCAAGCTCCAGGCCCAGGA...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCCCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCG +
Preference number: 5 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFPLRSC*DCSCRS
Trigger: CGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGG...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGATGCTGGGTAGTGGCCAGGCCGGACGGGTTTGGCAATCTGGGCAGAATGGCGTAAGCTGTTCCAGGTaGTTCTCAAGAAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: RMLGSGQAGRVWQSGQNGVSCSR*FSRKEI
Trigger: GATTTCCTTTCTTGAGAACAACCTGGAACAGCTTAC...GCCATTCTGCCCAGATTGCCAAACCCGTCCGGCCTGGCCACTACCCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674776.1
CDS-3UTR CAA 90 bp CTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACTGGCAGGTCACTCCTATaGTCATTGATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LEGVMGQCSLRLPAGIPTGRSLL*SLISVA
Trigger: TGCCACAGATATCAATGACAATAGGAGTGACCTGCC...AGTGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACCAGCAAGGACATCTTaGACAATCTGCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: SLKESWASAACAYQLAFPPARTS*TICMAH
Trigger: ATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTAGGGGGTTGCGCAGTTaGGTTTGTCTTCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFRGLRS*VCLPRW
Trigger: CCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCT...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAGGGGGTTGCGCAGTTaGGTTTGTCTTCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWRGLRS*VCLPRW
Trigger: CCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCCGGCAGGTCACTCCATaGTCCATGTTGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLRQVTP*SMLAFW
Trigger: CCAGAAGGCCAACATGGACAATGGAGTGACCTGCCG...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675697.1
CDS TCA 90 bp CCCAATTGTTTCCGCTGTCATCCCTACCCCTTGAGACATGGGAACTaGCATACTGTTGACTCACGGGGCAGGTGGAGGAGAAAGGACAGA +
Preference number: 5 (lower is better)
Translates to: PNCFRCHPYPLRHGN*HTVDSRGRWRRKDR
Trigger: TCTGTCCTTTCTCCTCCACCTGCCCCGTGAGTCAACAGTATGTCAGTTCCCATGTCTCAAGGGGTAGGGATGACAGCGGAAACAATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS GCA 90 bp GCCCCAATTGTCCCTGACACCTTCCTTACTCACCTTCACTTCATCTaGATCCTGAGTGTCAGGCTCCTTGTCCTTCAGGGCCACTTCATG +
Preference number: 5 (lower is better)
Translates to: APIVPDTFLTHLHFI*ILSVRLLVLQGHFM
Trigger: CATGAAGTGGCCCTGAAGGACAAGGAGCCTGACACTCAGGATGCAGATGAAGTGAAGGTGAGTAAGGAAGGTGTCAGGGACAATTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS GCA 90 bp ACCACTGTGCCTAGCCAGGGACATCATTTAATGTCCCTGCATGCCTaGCACAGACCTAGACAGATGGAGTTCTCTCCACGAAAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: TTVPSQGHHLMSLHA*HRPRQMEFSPRKKP
Trigger: GGGCTTCTTTCGTGGAGAGAACTCCATCTGTCTAGGTCTGTGGCAGGCATGCAGGGACATTAAATGATGTCCCTGGCTAGGCACAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS GCA 90 bp CTACCCAGCATGCACCAAACATTTCCTGTCCTGACTCCTTTGGACTaGCCTTCTGCATCCCCAGCCCATACCTTTGAAACCCAGTCATCC +
Preference number: 5 (lower is better)
Translates to: LPSMHQTFPVLTPLD*PSASPAHTFETQSS
Trigger: GGATGACTGGGTTTCAAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAGGAGTCAGGACAGGAAATGTTTGGTGCATGCTGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675397.1
ENST00000675984.1
ENST00000676081.1
CDS GCA 90 bp TCTGTTAGCTTATTCAAATGGAGTGGGGGAAGGGGTGTTGTTGGATaGTGGGTAGTGAGGTTGGGTGGTCACTGCTTCTACCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SVSLFKWSGGRGVVG*WVVRLGGHCFYLQA
Trigger: GGCCTGCAGGTAGAAGCAGTGACCACCCAACCTCACTACCCAGCATCCAACAACACCCCTTCCCCCACTCCATTTGAATAAGCTAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS CCA 90 bp CAGTCCCTCTTAGAAACTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: QSLLETESAGMQPWV*EISWLLSLGGEGKA
Trigger: AGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTTTCTAAGAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675737.1
ENST00000675882.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 90 bp CCAAAGGTGGGATTACCCATCTTTTTCACTCACCATTGTCCATGTTaGCCTTCTGGTAGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PKVGLPIFFTHHCPC*PSGRKPRGRQKMWL
Trigger: GAGCCACATCTTCTGGCGGCCCCTTGGCTTCCTACCAGAAGGCCAACATGGACAATGGTGAGTGAAAAAGATGGGTAATCCCACCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675737.1
CDS CCA 90 bp AATCTTGGTCTTCCTCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAGGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: NLGLPPESAGMQPWV*EISWLLSLGGEGKA
Trigger: AGCTTTTCCCTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGAGGAAGACCAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675433.1
CDS-3UTR CAA 90 bp CCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATACCACGATGGATGAGTaGTCATTCACAGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PTVALFSMSCSFSAEEPDTTMDE*SFTGVS
Trigger: GGAGACCCCTGTGAATGACAACTCATCCATCGTGGT...ATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSRWTFS*SPRVDT
Trigger: GGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGAGGAGGATGTAGTGTGAAGCTTCTGGTGAAGGGTTTGCGTGTGTGTTGTTTCAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: GGGCSVKLLVKGLRVCCFSCRHR*TTDLTS
Trigger: AGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCT...GAAACAACACACACGCAAACCCTTCACCAGAAGCTTCACACTACATCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATGCTGGTACCGGCGCTaGTCCTTCATGGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSCWYRR*SFMAPS
Trigger: GGAGGGCGCCATGAAGGACAAGCGCCGGTACCAGCA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTGCCGGCAGGTCACTCCTATaGTCATTGATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: DPSGSSLRASHLLKIHPAGRSLL*SLISVA
Trigger: TGCCACAGATATCAATGACAATAGGAGTGACCTGCC...GGCAGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: GRELVSETTGLQHAEKRPVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...AGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675866.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSLACNI*ADVSGQ
Trigger: CTGCCCACTCACATCTGCCAAAATGTTGCATGCCAG...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCCAAACCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: PKPRGGDGRSMPPSMEQENTHRG*RSLVCL
Trigger: AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT...TTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGAGCGCTGACTGATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACGGAAAAAGAGGGGCTTaGCCACCTCCACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GALTDFVGRFLKLTGGIYGKRGA*PPPLSK
Trigger: CTTGCTCAGTGGAGGTGGCAAAGCCCCTCTTTTTCC...GTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATCAGTCAGCGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS TCA 90 bp ACAGCTGACATCAAACCTACCTCTTTCGGAAAGAACTTCACGTTGTaGCCAGAACTCCAGGCAGGGCTGGGAATGGACCCACAGGGATGT +
Preference number: 5 (lower is better)
Translates to: TADIKPTSFGKNFTL*PELQAGLGMDPQGC
Trigger: ACATCCCTGTGGGTCCATTCCCAGCCCTGCCTGGAGTTCTGGTCACAACGTGAAGTTCTTTCCGAAAGAGGTAGGTTTGATGTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS TCA 90 bp GTTTACTGTCAGGTCCCAATTGTTTCCGCTGTCATCCCTACCCCTTaGGACATGGGAACTGACATACTGTTGACTCACGGGGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: VYCQVPIVSAVIPTP*DMGTDILLTHGAGG
Trigger: TCCACCTGCCCCGTGAGTCAACAGTATGTCAGTTCCCATGTCTCAAGGGGTAGGGATGACAGCGGAAACAATTGGGACCTGACAGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINGLGLF*GCRGGV
Trigger: CACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCC...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp TTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGGGAGAAGACCCCTCAATCGGCAGAGCACCTaGATGCTACATTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSMEGAAYGLRMAGRRPLNRQST*MLHSLL
Trigger: CAACAACGAATGTAGCATCAAGGTGCTCTGCCGATT...GAGGGGTCTTCTCCCAGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCGTGCACGGACAGATTaGTCTTGGTCACATCCAGAA +
Preference number: 5 (lower is better)
Translates to: VYPTVALFSMSCSFSAEERARTD*SWSHPE
Trigger: TTCTGGATGTGACCAAGACAAATCTGTCCGTGCACG...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTCGTTCAGTACAACCCTaGACAAATGGCACCCGGTTC +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETRSVQP*TNGTRF
Trigger: GAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCCCTCTGCTCCAGTCTaGCTGACCTTCTCACTCCCT +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGREPSAPV*LTFSLP
Trigger: AGGGAGTGAGAAGGTCAGCAAGACTGGAGCAGAGGG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTGCAGTTCTCCCTAACTGCTAAAAGGAGCTCAGCAGGTAAAGGGAGCAGGGCCTCCAGCATTTGCTGCTaGAGCTTCTCTATGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LQFSLTAKRSSAGKGSRASSICC*SFSMSW
Trigger: CCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGA...GGCCCTGCTCCCTTTACCTGCTGAGCTCCTTTTAGCAGTTAGGGAGAACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCAGCTTAATCTCCCCGTaGCCCACAATGACACTGAAC +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSSLISP*PTMTLN
Trigger: GTTCAGTGTCATTGTGGGCAACGGGGAGATTAAGCT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTAGCTTAATCTCCCCGTaGCCCACAATGACACTGAAC +
Preference number: 5 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSLISP*PTMTLN
Trigger: GTTCAGTGTCATTGTGGGCAACGGGGAGATTAAGCT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TCCTTGAAGGAGTCATGGGCCAGTGCAGCCTGCGCTTACCAGCTGGCATTCCCACGCTTGACCACAGACTaGACTTCTGATTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: SLKESWASAACAYQLAFPRLTTD*TSDLIL
Trigger: CAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCG...TGGGAATGCCAGCTGGTAAGCGCAGGCTGCACTGGCCCATGACTCCTTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGATCCTGGGCCTGGAGCTaGGCCAGCTCATCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRSWAWS*ASSSLK
Trigger: CTTGAGCGATGAGCTGGCCAAGCTCCAGGCCCAGGA...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCG +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSPLRSC*DCSCRS
Trigger: CGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTCGAGTCGTGACGTCTaGAACGAACAGCTTGCGAAG +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSSRDV*NEQLAK
Trigger: CTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCGA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCGAGTCGTGACGTCTaGAACGAACAGCTTGCGAAG +
Preference number: 5 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFSSRDV*NEQLAK
Trigger: CTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCGA...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTATCGAGTCGTGACGTCTaGAACGAACAGCTTGCGAAG +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLSSRDV*NEQLAK
Trigger: CTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCGA...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGTGGAGACAGCATGGCTaGTCTACCCCACCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWWRQHG*STPPLP
Trigger: GGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCA...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACGCTGGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTTATTTCCCTTACATCTaGCTAAAGAGAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HAGMQHFGRCEWAGQVPLYFPYI*LKRRLL
Trigger: GAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATA...AAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCCAGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTAGGGGGTTGCGCAGTTaGGTTTGTCTTCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMARGLRS*VCLPRW
Trigger: CCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCT...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGTGTGAGGGCCCAGCTTGTAGCTCAGTCACAGAACAGGAACAGGTGGCATCTGAGGGGAAAGCAGGAGTaGAGGGGTAACTACATAATT +
Preference number: 5 (lower is better)
Translates to: GVRAQLVAQSQNRNRWHLRGKQE*RGNYII
Trigger: AATTATGTAGTTACCCCTCAACTCCTGCTTTCCCCT...CAGATGCCACCTGTTCCTGTTCTGTGACTGAGCTACAAGCTGGGCCCTCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS CCA 90 bp TGGTACAGGAGTTTGCAAAGTACATATCTGAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGAGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: WYRSLQSTYLRWSWV*PAGRDSGSSGRGCW
Trigger: CCAACAGCCTCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTACTTTGCAAACTCCTGTACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANIGLGLF*GCRGGV
Trigger: CACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLMLHSL*VSAMVV
Trigger: TACCACCATGGCGGAGACCAACAACGAATGTAGCAT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GRSMPPSMEQERNPAHHFMLHSL*VSAMVV
Trigger: TACCACCATGGCGGAGACCAACAACGAATGTAGCAT...GAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCACGGACAGATTTGTCTaGGTCACATCCAGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSTDRFV*VTSRRS
Trigger: TGACCTTCTGGATGTGACCAAGACAAATCTGTCCGT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGACGGACAGATTTGTCTaGGTCACATCCAGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VYPTVALFSMSCSFSAEETDRFV*VTSRRS
Trigger: TGACCTTCTGGATGTGACCAAGACAAATCTGTCCGT...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCGCTGACAGTGACTTGTaGATATTCTTTGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSADSDL*IFFASS
Trigger: GGACGAGGCAAAGAATATCAACAAGTCACTGTCAGC...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGCTCTATGAGTTGGCTTaGTTGGTTGATTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVLYELA*LVDFII
Trigger: GATGATGAAATCAACCAACAAAGCCAACTCATAGAG...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTTCCTGGGCCTGGAGCTaGGCCAGCTCATCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLSWAWS*ASSSLK
Trigger: CTTGAGCGATGAGCTGGCCAAGCTCCAGGCCCAGGA...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CAA 90 bp TCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTAGTCAGCCTGAAGCTTCTCTAGTCAGCTCCTGCAGCTaGGTGCTCTTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSRVLRSSASRSQPEASLVSSCS*VLFSCS
Trigger: AGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGAC...TAGAGAAGCTTCAGGCTGACTACGAGAAGCTGAAGAGCGAAGAACACGAGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGAACAGCTTGCGAAGGTaGTGGAGGGTCTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRENSLRR*WRVWSS
Trigger: GGAACTCCAGACCCTCCACAACCTTCGCAAGCTGTT...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTCAACGCAGATCTGCATaGTCACGTACCAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETQRRSA*SRTSCL
Trigger: CAAACAGCTGGTACGTGACAATGCAGATCTGCGTTG...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000676457.1
CDS-3UTR CAA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTCAACGCAGATCTGCATaGTCACGTACCAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIQRRSA*SRTSCL
Trigger: CAAACAGCTGGTACGTGACAATGCAGATCTGCGTTG...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGGGCAGGTCACTCCTATaGTCATTGATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLGRELVSETTGLQHAEKGRSLL*SLISVA
Trigger: TGCCACAGATATCAATGACAATAGGAGTGACCTGCC...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 5 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACLLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGCTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 5 (lower is better)
Translates to: LVYPTVALFSMSCSFSAELLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCAAGGGGTGGAGATGGGAGGAGCATGCCGCCCAGTATGGAACAAGAAAGAAATAAGGGAAATGGTCCCTaGAGCAACCCATTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: PRGGDGRSMPPSMEQERNKGNGP*SNPFLS
Trigger: ACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCTT...ATTTCTTTCTTGTTCCATACTGGGCGGCATGCTCCTCCCATCTCCACCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAAGGGAAATGGTCCCTaGAGCAACCCATTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: GLGRELVSETTGLQHAEKKGNGP*SNPFLS
Trigger: ACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCTT...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: MSCSFSAEEPDWTPFLRTATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...TGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AATCAGCTCTGGGTTCTGGTCATGAGCTCTGGGGCAGGGAATATCAAAAGGAGCGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: NQLWVLVMSSGAGNIKRSATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...GCTCCTTTTGATATTCCCTGCCCCAGAGCTCATGACCAGAACCCAGAGCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACAGGTGCAGGCGTGAAGCAAACATCGCCTTAACTGGAGATGTCTTAGTTCCAGGCCCTAAAGCAACCTaGGTGAGAAACCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: HRCRREANIALTGDVLVPGPKAT*VRNPVT
Trigger: TGTCACTGGGTTTCTCACCAAGGTTGCTTTAGGGCC...TGGAACTAAGACATCTCCAGTTAAGGCGATGTTTGCTTCACGCCTGCACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS TCA 90 bp TGTCTCCTGAGGTGGGGCTACGAAGTTGTGGCATTGTTGAGGGAATaGCACATGGATGTTAAAGAATCAGACCCAGAGGGGACATGTGAG +
Preference number: 5 (lower is better)
Translates to: CLLRWGYEVVALLRE*HMDVKESDPEGTCE
Trigger: CTCACATGTCCCCTCTGGGTCTGATTCTTTAACATCCATGTGTCATTCCCTCAACAATGCCACAACTTCGTAGCCCCACCTCAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS GCA 90 bp CGTTCAGTACAACCCTTGACAAATGGCACCCGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTGGTCACATCCAGAAGGTCACGAATT +
Preference number: 5 (lower is better)
Translates to: RSVQPLTNGTRFLSS*TDRFVLVTSRRSRI
Trigger: AATTCGTGACCTTCTGGATGTGACCAAGACAAATCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYGLGLF*GCRGGV
Trigger: CACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAATCGGCAGAGCACCTaGATGCTACATTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETNRQST*MLHSLL
Trigger: CAACAACGAATGTAGCATCAAGGTGCTCTGCCGATT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCAATGGCACCCGGTTCTaGTCCTCGTGCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLNGTRF*SSCTDR
Trigger: TCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATT...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGTTCAGTACAACCCTaGACAAATGGCACCCGGTTC +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERSVQP*TNGTRF
Trigger: GAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTCTCCTGCTTGATGTaGATGAGGAAGATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLFSCLM*MRKMLW
Trigger: CCACAGCATCTTCCTCATCAACATCAAGCAGGAGAA...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTTCTCCTGCTTGATGTaGATGAGGAAGATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETFSCLM*MRKMLW
Trigger: CCACAGCATCTTCCTCATCAACATCAAGCAGGAGAA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCGCTGACAGTGACTTGTaGATATTCTTTGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLADSDL*IFFASS
Trigger: GGACGAGGCAAAGAATATCAACAAGTCACTGTCAGC...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTAGTCCTGGAGAATCCTaGTCATTTTGCTGTCACGAT +
Preference number: 5 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPSPGES*SFCCHD
Trigger: ATCGTGACAGCAAAATGACAAGGATTCTCCAGGACT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCGTGCGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCAGTCCTGGAGAATCCTaGTCATTTTGCTGTCACGAT +
Preference number: 5 (lower is better)
Translates to: CVRACVYEGSQPSSSHFSSPGES*SFCCHD
Trigger: ATCGTGACAGCAAAATGACAAGGATTCTCCAGGACT...GGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACGCACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTACCACGATGGATGAGTaGTCATTCACAGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCTTMDE*SFTGVS
Trigger: GGAGACCCCTGTGAATGACAACTCATCCATCGTGGT...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGCATGCAACATTTTGGCAGATGTGAGTGGGCAGGCCAGGTGCCCCTTGCAGTGTATGAGTTGGCTTTGTaGGTTGATTTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: GMQHFGRCEWAGQVPLAVYELAL*VDFIIL
Trigger: AAGGATGATGAAATCAACCAACAAAGCCAACTCATA...CACTGCAAGGGGCACCTGGCCTGCCCACTCACATCTGCCAAAATGTTGCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTCCAGCATTTGCTGCTaGAGCTTCTCTATGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LVSETTGLQHAEKRPQSLSSICC*SFSMSW
Trigger: CCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGA...GAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGTCCAGCATTTGCTGCTaGAGCTTCTCTATGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LVYPTVALFSMSCSFSAESSICC*SFSMSW
Trigger: CCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGA...CTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRSCRHR*TTDLTS
Trigger: AGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACCCCTCAGGGTCAAGCCTTAGAGCTTCCCACCTCTTGAAAATCCACCCTATTTCTGCACTTTTCTaGACTCGAGTCGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: EDPSGSSLRASHLLKIHPISALF*TRVVTS
Trigger: AGACGTCACGACTCGAGTCAAGAAAAGTGCAGAAAT...AGGGTGGATTTTCAAGAGGTGGGAAGCTCTAAGGCTTGACCCTGAGGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAACATTGGCAGGTCACTCCTATaGTCATTGATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: YTQGVAQFGLSSTLACNIGRSLL*SLISVA
Trigger: TGCCACAGATATCAATGACAATAGGAGTGACCTGCC...AATGTTGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMAVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTCCAGCAAGGACATCTTaGACAATCTGCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: AALVQRSQIGPPSSEQWFPARTS*TICMAH
Trigger: ATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGG...AAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGCAGCTTTAGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTAAGGGAAATGGTCCCTaGAGCAACCCATTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: CSFSAEEPDWTPFLRTMVKGNGP*SNPFLS
Trigger: ACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCTT...AACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACTAAAGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACAGCATGGCTTGTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAAGGGAAATGGTCCCTaGAGCAACCCATTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: TAWLVYPTVALFSMSCSFKGNGP*SNPFLS
Trigger: ACTGAGAAATGGGTTGCTCAAGGGACCATTTCCCTT...AAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGACAAGCCATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGC +
Preference number: 5 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVVAQFG*SSTLAC
Trigger: GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAAC...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCAAGGGGGTTGCGCAGTTaGGTTTGTCTTCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSRGLRS*VCLPRW
Trigger: CCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCT...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACNTHRG*RSLVCL
Trigger: AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS TCA 90 bp GGGCCACTTCATGCACAGTTTCTAAGGGAAAGAGGGGAAGACAGCTaGCATCAAACCTACCTCTTTCGGAAAGAACTTCACGTTGTGACC +
Preference number: 5 (lower is better)
Translates to: GPLHAQFLRERGEDS*HQTYLFRKELHVVT
Trigger: GGTCACAACGTGAAGTTCTTTCCGAAAGAGGTAGGTTTGATGTCAGCTGTCTTCCCCTCTTTCCCTTAGAAACTGTGCATGAAGTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS-3UTR CAA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVMLHSL*VSAMVV
Trigger: TACCACCATGGCGGAGACCAACAACGAATGTAGCAT...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCTTGATGCTACATTCGTaGTTGGTCTCCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVLMLHS*LVSAMV
Trigger: CACCATGGCGGAGACCAACAACGAATGTAGCATCAA...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTGATGCTACATTCGTaGTTGGTCTCCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRELMLHS*LVSAMV
Trigger: CACCATGGCGGAGACCAACAACGAATGTAGCATCAA...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGTGCACGGACAGATTaGTCTTGGTCACATCCAGAA +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERARTD*SWSHPE
Trigger: TTCTGGATGTGACCAAGACAAATCTGTCCGTGCACG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCGTGCACGGACAGATTaGTCTTGGTCACATCCAGAA +
Preference number: 5 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCRARTD*SWSHPE
Trigger: TTCTGGATGTGACCAAGACAAATCTGTCCGTGCACG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCATGTTCTCCTGCTaGATGTTGATGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: RELVSETTGLQHAEKRPQSMFSC*MLMRKM
Trigger: CATCTTCCTCATCAACATCAAGCAGGAGAACATGGA...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTATCCATGTTCTCCTGCTaGATGTTGATGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLSMFSC*MLMRKM
Trigger: CATCTTCCTCATCAACATCAAGCAGGAGAACATGGA...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAAGAGCTGACAGTGACTaGTTGATATTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLRADSD*LIFFAS
Trigger: CGAGGCAAAGAATATCAACAAGTCACTGTCAGCTCT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTAGTCCTGGAGAATCCTaGTCATTTTGCTGTCACGAT +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETSPGES*SFCCHD
Trigger: ATCGTGACAGCAAAATGACAAGGATTCTCCAGGACT...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGGAGCTTCTCTATGAGTaGGCTTTGTTGGTTGATTTC +
Preference number: 5 (lower is better)
Translates to: VYPTVALFSMSCSFSAEEELLYE*ALLVDF
Trigger: GAAATCAACCAACAAAGCCAACTCATAGAGAAGCTC...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAGCTCCTGCAGCTTGGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGTACGCTTGACCACAGACTaGACTTCTGATTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: QLLQLGALLVFFALQLLVRLTTD*TSDLIL
Trigger: CAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCG...TACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAGTCAGCTCCTGCAGCTaGGTGCTCTTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRVSSCS*VLFSCS
Trigger: AGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGAC...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGATTTCTGCACTTTTCTaGACTCGAGTCGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWISALF*TRVVTS
Trigger: AGACGTCACGACTCGAGTCAAGAAAAGTGCAGAAAT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCAACGCAGATCTGCATaGTCACGTACCAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCQRRSA*SRTSCL
Trigger: CAAACAGCTGGTACGTGACAATGCAGATCTGCGTTG...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000676457.1
CDS-3UTR CAA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACTCTGTGGCATTTCCATaGTCCATGTTGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDSVAFP*SMLAFW
Trigger: CCAGAAGGCCAACATGGACAATGGAAATGCCACAGA...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTGTCCAACAACAGGGGTaGGGGAGGGAGTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: APCGRKGPSETKTTVLFSVQQQG*GRELVS
Trigger: TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGAC...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGACATGCATGATAAACTaGCTCTTGAGTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: VYPTVALFSMSCSFSAEETCMIN*LLSRVW
Trigger: CCAAACACGACTCAAGAGCAAGTTTATCATGCATGT...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTGACTGATTTCGTGGGGCGTTTCCTAAAGCTTACTGGTGGCATATACAGATGGGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LTDFVGRFLKLTGGIYRWATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...CCATCTGTATATGCCACCAGTAAGCTTTAGGAAACGCCCCACGAAATCAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGGCAACTAGAGAGATTTaGCCAATGAGCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGREATREI*PMSWKP
Trigger: GGGCTTCCAGCTCATTGGCAAAATCTCTCTAGTTGC...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRETFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGTGCAGAGGAGCCAGATTGGACCCCCTTCCTCAGAACAATGGTTTTCAAACTAACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: SAEEPDWTPFLRTMVFKLTFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...TAGTTTGAAAACCATTGTTCTGAGGAAGGGGGTCCAATCTGGCTCCTCTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAACAACAGTCCTCTTCAGTATGGAGGGTGCTGCATATGGGCTGAGAATGGCTACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: KTTVLFSMEGAAYGLRMATFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...AGCCATTCTCAGCCCATATGCAGCACCCTCCATACTGAAGAGGACTGTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGCTAGTGACTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: RLDIRTPDFLSWFGMASDCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...GTCACTAGCCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: APCGRKGPSETKTTVLFSLACNI*ADVSGQ
Trigger: CTGCCCACTCACATCTGCCAAAATGTTGCATGCCAG...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CTGTGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LCHLSPHLRYTLTFPYVFLACNI*ADVSGQ
Trigger: CTGCCCACTCACATCTGCCAAAATGTTGCATGCCAG...AAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS TCA 90 bp GGGAAGGGAAGGCCAGCTCTTCAAACTTCTTCCTTTTTGAACGAGTaGGTCCAGTTAGAATTGATGTGTCCACCTTCAGATACCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GKGRPALQTSSFLNE*VQLELMCPPSDTRG
Trigger: GCCTCTGGTATCTGAAGGTGGACACATCAATTCTAACTGGACTCACTCGTTCAAAAAGGAAGAAGTTTGAAGAGCTGGCCTTCCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS-3UTR CAA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: APCGRKGPSETKTTVLFSMLHSL*VSAMVV
Trigger: TACCACCATGGCGGAGACCAACAACGAATGTAGCAT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTTTGATGCTACATTCGTaGTTGGTCTCCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: APCGRKGPSETKTTVLFSLMLHS*LVSAMV
Trigger: CACCATGGCGGAGACCAACAACGAATGTAGCATCAA...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTAATCGGCAGAGCACCTaGATGCTACATTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: RACVYEGSQPSSSHFSFCNRQST*MLHSLL
Trigger: CAACAACGAATGTAGCATCAAGGTGCTCTGCCGATT...ACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACAGCCACATGACGATTaGATTTCCCTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAQPHDD*ISLHQS
Trigger: TGATTGATGAAGGGAAATCAAATCGTCATGTGGCTG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCCAGCCACATGACGATTaGATTTCCCTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: SKYTQGVAQFGLSSTLACQPHDD*ISLHQS
Trigger: TGATTGATGAAGGGAAATCAAATCGTCATGTGGCTG...GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GGGTTGGGGAGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGCTCTATGAGTTGGCTTaGTTGGTTGATTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GLGRELVSETTGLQHAEKLYELA*LVDFII
Trigger: GATGATGAAATCAACCAACAAAGCCAACTCATAGAG...CTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCTCCCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCCCACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCTCTATGAGTTGGCTTaGTTGGTTGATTTCATCATC +
Preference number: 5 (lower is better)
Translates to: VYPTVALFSMSCSFSAEELYELA*LVDFII
Trigger: GATGATGAAATCAACCAACAAAGCCAACTCATAGAG...CTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGTGGGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAAGCTTAATCTCCCCGTaGCCCACAATGACACTGAAC +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSSLISP*PTMTLN
Trigger: GTTCAGTGTCATTGTGGGCAACGGGGAGATTAAGCT...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGGAGTTAGTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGCGCTTGACCACAGACTaGACTTCTGATTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RELVSETTGLQHAEKRPQRLTTD*TSDLIL
Trigger: CAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCG...CTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATACTAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACGTCAGCTCCTGCAGCTaGGTGCTCTTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNVSSCS*VLFSCS
Trigger: AGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGAC...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGTCAGCTCCTGCAGCTaGGTGCTCTTCTCGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLVSSCS*VLFSCS
Trigger: AGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGAC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTGTAAGCTGTTCCAGGTaGTTCTCAAGAAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETVSCSR*FSRKEI
Trigger: GATTTCCTTTCTTGAGAACAACCTGGAACAGCTTAC...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGACATGCATGATAAACTaGCTCTTGAGTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWTCMIN*LLSRVW
Trigger: CCAAACACGACTCAAGAGCAAGTTTATCATGCATGT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCACTTCTGCTTAAGGCTTaGTGTGTGTGCATGCGTGTG +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSLLLKA*CVCMRV
Trigger: CACACGCATGCACACACACAAAGCCTTAAGCAGAAG...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGCATGCCGCCCAGTATGGAACAAGAAAGAAATCCAGCTCATCACTTCAACTTTGCCGCTGGAGAATCTaGGTCTTCCTCCTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: EHAAQYGTRKKSSSSLQLCRWRI*VFLLEK
Trigger: CTTTTCTAGGAGGAAGACCAAGATTCTCCAGCGGCA...AAGTTGAAGTGATGAGCTGGATTTCTTTCTTGTTCCATACTGGGCGGCATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACCAGGGCCTCTTTTCCTaGAAGGAGTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNQGLFS*KESWAS
Trigger: ACTGGCCCATGACTCCTTCAAGGAAAAGAGGCCCTG...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACTGGAGACAGCATGGCTaGTCTACCCCACCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYWRQHG*STPPLP
Trigger: GGGCAACGGTGGGGTAGACAAGCCATGCTGTCTCCA...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCATATTTCCCTTACATCTaGCTAAAGAGAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHAYFPYI*LKRRLL
Trigger: GAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATA...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTCTACCACCCCTGTGGTTCTAATCTACAGCGGCCAAGCTCACTTCTTTGGACAAACGGCAGGGACTATTaGTGTTTTACAGGAATACAG +
Preference number: 5 (lower is better)
Translates to: VYHPCGSNLQRPSSLLWTNGRDY*CFTGIQ
Trigger: CTGTATTCCTGTAAAACACAAATAGTCCCTGCCGTT...TGTCCAAAGAAGTGAGCTTGGCCGCTGTAGATTAGAACCACAGGGGTGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACGTTCAGTACAACCCTaGACAAATGGCACCCGGTTC +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLRSVQP*TNGTRF
Trigger: GAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAGCCTAAGTCGTTCAGTACAACCCTaGACAAATGGCACCCGGTTC +
Preference number: 5 (lower is better)
Translates to: IKPPGFLSALLTANISLSRSVQP*TNGTRF
Trigger: GAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG...ACTTAGGCTAATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTCCACGCTGGCATGCACTCTATGAGTTGGCTTaGTTGGTTGATTTCATCATC +
Preference number: 5 (lower is better)
Translates to: VNTHRGLRSLVCLPRWHALYELA*LVDFII
Trigger: GATGATGAAATCAACCAACAAAGCCAACTCATAGAG...TGCATGCCAGCGTGGAAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTAACAGCTTGCGAAGGTaGTGGAGGGTCTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANINSLRR*WRVWSS
Trigger: GGAACTCCAGACCCTCCACAACCTTCGCAAGCTGTT...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AATCTTGGTCTTCCTCCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTTCGAGTCGTGACGTCTaGAACGAACAGCTTGCGAAG +
Preference number: 5 (lower is better)
Translates to: NLGLPPRKDWISGHQTFSSSRDV*NEQLAK
Trigger: CTTCGCAAGCTGTTCGTTCAAGACGTCACGACTCGA...AGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGGAGGAAGACCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTCTGTGGCATTTCCATaGTCCATGTTGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLSVAFP*SMLAFW
Trigger: CCAGAAGGCCAACATGGACAATGGAAATGCCACAGA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGATCTGTGGCATTTCCATaGTCCATGTTGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRSVAFP*SMLAFW
Trigger: CCAGAAGGCCAACATGGACAATGGAAATGCCACAGA...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATTTTCTGTGGCATTTCCATaGTCCATGTTGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RLRNFPAYSPPNPRNQSFSVAFP*SMLAFW
Trigger: CCAGAAGGCCAACATGGACAATGGAAATGCCACAGA...AAATGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTATCAGAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: VSETTGLQHAEKRPQSLLKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...TAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ACCGTTGCCCTCTTTTCCATGAGTTGCAGCTTTAGTGCAGAGGAGCCAGATTGGAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: TVALFSMSCSFSAEEPDWKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...CCAATCTGGCTCCTCTGCACTAAAGCTGCAACTCATGGAAAAGAGGGCAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGC +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANIVAQFG*SSTLAC
Trigger: GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAAC...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATGTCACGTACCAGCTTaGAAACCCAGTCATCCACCT +
Preference number: 5 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSCHVPA*KPSHPP
Trigger: AGGTGGATGACTGGGTTTCAAAGCTGGTACGTGACA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTA +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINMLHSL*VSAMVV
Trigger: TACCACCATGGCGGAGACCAACAACGAATGTAGCAT...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACTTGATGCTACATTCGTaGTTGGTCTCCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINLMLHS*LVSAMV
Trigger: CACCATGGCGGAGACCAACAACGAATGTAGCATCAA...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCAGCCACATGACGATTaGATTTCCCTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGREQPHDD*ISLHQS
Trigger: TGATTGATGAAGGGAAATCAAATCGTCATGTGGCTG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TTTCCCTTACATCTTGCTAAAGAGAAGGCTGCTCCCTCTGTGTCATCTCTCTCCCAGCCACATGACGATTaGATTTCCCTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: FPLHLAKEKAAPSVSSLSQPHDD*ISLHQS
Trigger: TGATTGATGAAGGGAAATCAAATCGTCATGTGGCTG...GGAGAGAGATGACACAGAGGGAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GCACCATGTGGAAGGAAAGGACCGTCTGAAACTAAAACAACAGTCCTCTTCAGTAGAGCTGACAGTGACTaGTTGATATTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: APCGRKGPSETKTTVLFSRADSD*LIFFAS
Trigger: CGAGGCAAAGAATATCAACAAGTCACTGTCAGCTCT...ACTGAAGAGGACTGTTGTTTTAGTTTCAGACGGTCCTTTCCTTCCACATGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTATGAGTTGGCTTTGTaGGTTGATTTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETYELAL*VDFIIL
Trigger: AAGGATGATGAAATCAACCAACAAAGCCAACTCATA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTAAGAGAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGCGCTTGACCACAGACTaGACTTCTGATTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: VREDIKHSTVQQQGLGRERLTTD*TSDLIL
Trigger: CAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCG...CTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTAATTTCTGCACTTTTCTaGACTCGAGTCGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVISALF*TRVVTS
Trigger: AGACGTCACGACTCGAGTCAAGAAAAGTGCAGAAAT...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GTGCGTGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCACATGCATGATAAACTaGCTCTTGAGTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: VRVCMKGHNPLAPIFPFVTCMIN*LLSRVW
Trigger: CCAAACACGACTCAAGAGCAAGTTTATCATGCATGT...GACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACACGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLTFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACACTTTCTCTCCTGGTTaGGAATGGCTAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNTFSPG*EWLVTS
Trigger: GGAGGTCACTAGCCATTCCAAACCAGGAGAGAAAGT...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANILACNI*ADVSGQ
Trigger: CTGCCCACTCACATCTGCCAAAATGTTGCATGCCAG...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGTTGCGCAGTTTGGTTaGTCTTCCACGCTGGCATGC +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYVAQFG*SSTLAC
Trigger: GCATGCCAGCGTGGAAGACAAACCAAACTGCGCAAC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLNTHRG*RSLVCL
Trigger: AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGACCACAGGTTTGCAGCATGCTGAGAAGAGGCCTCAGTCCCTCTTAGAAACTTTGTACCTATTGTCATaGATATCTGTGGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: ETTGLQHAEKRPQSLLETLYLLS*ISVAFP
Trigger: TGGAAATGCCACAGATATCAATGACAATAGGTACAA...AGTTTCTAAGAGGGACTGAGGCCTCTTCTCAGCATGCTGCAAACCTGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTACGTCAGATGCCCACGTaGTTTTCGTCCAGACCTTAT +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLRQMPT*FSSRPY
Trigger: ATAAGGTCTGGACGAAAACAACGTGGGCATCTGACG...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS TCA 90 bp TGTTTTACAGGAATACAGGGAAACTCAAGGCCAGAGGGATGTAAATaGCTTGTCCAATGTCACAAGGCTTCCAAAGGTAGGAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: CFTGIQGNSRPEGCK*LVQCHKASKGRRET
Trigger: GGTTTCTCTCCTACCTTTGGAAGCCTTGTGACATTGGACAAGTCATTTACATCCCTCTGGCCTTGAGTTTCCCTGTATTCCTGTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000675737.1
ENST00000675882.1
ENST00000675929.1
ENST00000676437.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACAATCGGCAGAGCACCTaGATGCTACATTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINNRQST*MLHSLL
Trigger: CAACAACGAATGTAGCATCAAGGTGCTCTGCCGATT...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTGCTGACAGTGACTTGTaGATATTCTTTGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLADSDL*IFFASS
Trigger: GGACGAGGCAAAGAATATCAACAAGTCACTGTCAGC...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455537.7
ENST00000674619.1
CDS-3UTR CAA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATACCACGATGGATGAGTaGTCATTCACAGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNTTMDE*SFTGVS
Trigger: GGAGACCCCTGTGAATGACAACTCATCCATCGTGGT...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAGAGCTTCTCTATGAGTaGGCTTTGTTGGTTGATTTC +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSELLYE*ALLVDF
Trigger: GAAATCAACCAACAAAGCCAACTCATAGAGAAGCTC...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CCTAGAAAAGACTGGATATCAGGACACCAGACTTTCTCTCCTGGTTTGGAATGGGAGCTTCTCTATGAGTaGGCTTTGTTGGTTGATTTC +
Preference number: 5 (lower is better)
Translates to: PRKDWISGHQTFSPGLEWELLYE*ALLVDF
Trigger: GAAATCAACCAACAAAGCCAACTCATAGAGAAGCTC...CCATTCCAAACCAGGAGAGAAAGTCTGGTGTCCTGATATCCAGTCTTTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAGAAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGAATTTCTGCACTTTTCTaGACTCGAGTCGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: EKEETFTLLPIAPNKEGRISALF*TRVVTS
Trigger: AGACGTCACGACTCGAGTCAAGAAAAGTGCAGAAAT...TCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAGTAAGCTGTTCCAGGTaGTTCTCAAGAAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSVSCSR*FSRKEI
Trigger: GATTTCCTTTCTTGAGAACAACCTGGAACAGCTTAC...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACCCAGCAAGGACATCTTaGACAATCTGCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINPARTS*TICMAH
Trigger: ATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGG...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCTGGCATGCAACATTTaGGCAGATGTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYLACNI*ADVSGQ
Trigger: CTGCCCACTCACATCTGCCAAAATGTTGCATGCCAG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLNTHRG*RSLVCL
Trigger: AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATCTATGTACACCAAGTAAATACACACAGGGGGTTGCGCAGTTTGGTTTGTCTTAATACACACAGGGGGTaGCGCAGTTTGGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: IYVHQVNTHRGLRSLVCLNTHRG*RSLVCL
Trigger: AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATT...AAGACAAACCAAACTGCGCAACCCCCTGTGTGTATTTACTTGGTGTACATAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGCATCTGCACACACTTaGGTTTACTGTCCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLASAHT*VYCPVP
Trigger: AGGAACAGGACAGTAAACCAAAGTGTGTGCAGATGC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAAGAGCTGACAGTGACTaGTTGATATTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLRADSD*LIFFAS
Trigger: CGAGGCAAAGAATATCAACAAGTCACTGTCAGCTCT...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACAGCTTAATCTCCCCGTaGCCCACAATGACACTGAAC +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYSLISP*PTMTLN
Trigger: GTTCAGTGTCATTGTGGGCAACGGGGAGATTAAGCT...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATCAAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: DIKHSTVQQQGLGRELVSKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...TGATACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAAGGCTCAGAAATTTCCCAGCCTATTCACCCCCAAACCCAAGGAATCAATCATATTTCCCTTACATCTaGCTAAAGAGAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: KRLRNFPAYSPPNPRNQSYFPYI*LKRRLL
Trigger: GAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATA...TGATTGATTCCTTGGGTTTGGGGGTGAATAGGCTGGGAAATTTCTGAGCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACGCTCATCACTTCAACTaGAGGGCACTGAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYAHHFN*RALKVQ
Trigger: CTGCACTTTCAGTGCCCTCAAGTTGAAGTGATGAGC...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674980.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTCAACGCAGATCTGCATaGTCACGTACCAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANIQRRSA*SRTSFE
Trigger: TTCAAAGCTGGTACGTGACAATGCAGATCTGCGTTG...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACTTCTCCTGCTTGATGTaGATGAGGAAGATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYFSCLM*MRKMLW
Trigger: CCACAGCATCTTCCTCATCAACATCAAGCAGGAGAA...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATTTCTCCTGCTTGATGTaGATGAGGAAGATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNFSCLM*MRKMLW
Trigger: CCACAGCATCTTCCTCATCAACATCAAGCAGGAGAA...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp GAAGACATCAAACATAGTACAGTCCAACAACAGGGGTTGGGGAGGGAGTTAGTATATGAGTTGGCTTTGTaGGTTGATTTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: EDIKHSTVQQQGLGRELVYELAL*VDFIIL
Trigger: AAGGATGATGAAATCAACCAACAAAGCCAACTCATA...TACTAACTCCCTCCCCAACCCCTGTTGTTGGACTGTACTATGTTTGATGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTCATCTCTCTCCTCATCTGCGCTACACCCTCACATTTCCTTATGTGTTTTTAGAGCTTCTCTATGAGTaGGCTTTGTTGGTTGATTTC +
Preference number: 5 (lower is better)
Translates to: CHLSPHLRYTLTFPYVFLELLYE*ALLVDF
Trigger: GAAATCAACCAACAAAGCCAACTCATAGAGAAGCTC...TAAAAACACATAAGGAAATGTGAGGGTGTAGCGCAGATGAGGAGAGAGATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp AAAGAAGAAACATTCACCCTCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTAGTAAGCTGTTCCAGGTaGTTCTCAAGAAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: KEETFTLLPIAPNKEGRLVSCSR*FSRKEI
Trigger: GATTTCCTTTCTTGAGAACAACCTGGAACAGCTTAC...TAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGAGGGTGAATGTTTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATTGTAGCCAGCAAGGACATCTTTGACAATCTGCATGGCACATGCATGATAAACACATGCATGATAAACTaGCTCTTGAGTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: IVASKDIFDNLHGTCMINTCMIN*LLSRVW
Trigger: CCAAACACGACTCAAGAGCAAGTTTATCATGCATGT...GTTTATCATGCATGTGCCATGCAGATTGTCAAAGATGTCCTTGCTGGCTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675216.1
CDS-3UTR CAA 90 bp CGCTACACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACTATTTCCCTTACATCTaGCTAAAGAGAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RYTLTFPYVFLKEPCGGNYFPYI*LKRRLL
Trigger: GAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATA...GTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTGTAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTTCCATGTTCTCCTGCTaGATGTTGATGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCSMFSC*MLMRKM
Trigger: CATCTTCCTCATCAACATCAAGCAGGAGAACATGGA...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TGTGTGTATGAAGGGTCACAACCCTCTAGCTCCCATTTTTCCTTTTGTCATCTCTATGAGTTGGCTTTGTaGGTTGATTTCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: CVYEGSQPSSSHFSFCHLYELAL*VDFIIL
Trigger: AAGGATGATGAAATCAACCAACAAAGCCAACTCATA...GAGATGACAAAAGGAAAAATGGGAGCTAGAGGGTTGTGACCCTTCATACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CAACATTACATAAAACCCCCTGGATTCTTAAGTGCCCTGCTGACAGCAAATATTTATTTCCCTTACATCTaGCTAAAGAGAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QHYIKPPGFLSALLTANIYFPYI*LKRRLL
Trigger: GAGCAGCCTTCTCTTTAGCAAGATGTAAGGGAAATA...AATATTTGCTGTCAGCAGGGCACTTAAGAATCCAGGGGGTTTTATGTAATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000674980.1
ENST00000675433.1
ENST00000676457.1
CDS-3UTR CAA 90 bp CACCCTCACATTTCCTTATGTGTTTTTAAAAGAACCATGTGGTGGCAACATTACCGCTTGACCACAGACTaGACTTCTGATTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: HPHISLCVFKRTMWWQHYRLTTD*TSDLIL
Trigger: CAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCG...GTAATGTTGCCACCACATGGTTCTTTTAAAAACACATAAGGAAATGTGAGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS-3UTR CAA 90 bp TCCTCCCTATTGCCCCAAATAAGGAAGGTAGACTATGCTTTGAAATTGCTAAATGGACTGTTGTACCTATaGTCATTGATATCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSLLPQIRKVDYALKLLNGLLYL*SLISVA
Trigger: TGCCACAGATATCAATGACAATAGGTACAACAGTCC...ATTTAGCAATTTCAAAGCATAGTCTACCTTCCTTATTTGGGGCAATAGGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676437.1
CDS-3UTR CAA 90 bp ATTTCTCTGTCTCATGATGCTAAGACATTCTTCTGCTTAAGGCTTTGTGTGTGTAAGGAATCAATCATTTaGACTACACCTGCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: ISLSHDAKTFFCLRLCVCKESII*TTPACN
Trigger: GTTACAGGCAGGTGTAGTCAAAATGATTGATTCCTT...ACACACACAAAGCCTTAAGCAGAAGAATGTCTTAGCATCATGAGACAGAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455537.7
ENST00000674619.1
ENST00000676437.1
ENST00000676457.1
CDS GCA 72 bp GCCGGGGCGCGCTGTCTCTCTCCTGCGGCAGCGGGATaGGGGCGACCTGGGCGTCTGGTCCTTTCGGGCTCT +
Preference number: 6 (lower is better)
Translates to: AGARCLSPAAAG*GRPGRLVLSGS
Trigger: AGAGCCCGAAAGGACCAGACGCCCAGGTCGCCCGCATCCCGCTGCCGCAGGAGAGAGACAGCGCGCCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675023.1
ENST00000675216.1
ENST00000676359.1
CDS GCA 72 bp AGAGGGCTCTCAGCAGAGGCCGAGGCGGAGGACAGGTaGTCAGTCTCTGGGGACAGAGTTGAGGGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RGLSAEAEAEDR*SVSGDRVEGAR
Trigger: CCGGGCGCCCTCAACTCTGTCCCCAGAGACTGAGCACCTGTCCTCCGCCTCGGCCTCTGCTGAGAGCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675023.1
ENST00000675216.1
ENST00000676359.1
ENST00000676457.1
CDS CCA 72 bp AAGCAGCCCCCTGCCACTCTGCAGAGACTCGGCCGCTaGCCTGGCCAGGCCACACCCAGCCATCCTGATGCA +
Preference number: 6 (lower is better)
Translates to: KQPPATLQRLGR*PGQATPSHPDA
Trigger: TGCATCAGGATGGCTGGGTGTGGCCTGGCCAGGCCAGCGGCCGAGTCTCTGCAGAGTGGCAGGGGGCTGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675023.1
CDS GCA 72 bp GTGGTAGCCGGCGTGGGGCTGGGACTCTTCTTGGGCTaGAGGGGTGGTGTGTGCTCCAGAGGAGAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: VVAGVGLGLFLG*RGGVCSRGEGS
Trigger: AGAGCCCTCTCCTCTGGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCCCACGCCGGCTACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675023.1
ENST00000675216.1
ENST00000676359.1
ENST00000676457.1
CDS CAA 72 bp GCCATGGTGGTAGCCGGCGTGGGGCTGGGACTCTTCTaGGGCTGCAGGGGTGGTGTGTGCTCCAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: AMVVAGVGLGLF*GCRGGVCSRGE
Trigger: CTCTCCTCTGGAGCACACACCACCCCTGCAGCCCAAGAAGAGTCCCAGCCCCACGCCGGCTACCACCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675023.1
ENST00000675216.1
ENST00000676359.1
ENST00000676457.1
CDS TCA 72 bp GATGAGAGCTCCCGCCCGGTCACTTCCATCTTGCGGTaGCACTCCACCTGGAGGTTCTCCAGCTGCCGGCAC +
Preference number: 6 (lower is better)
Translates to: DESSRPVTSILR*HSTWRFSSCRH
Trigger: GTGCCGGCAGCTGGAGAACCTCCAGGTGGAGTGTCACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675299.1
ENST00000675629.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676352.1
ENST00000676457.1
CDS CCA 72 bp GCCCCCACCCTATGCCTTCTAGGGTCCAGGGAGCTTTaGGTGGGACTCCAACCCACACGTGTGGTCACTCAC +
Preference number: 6 (lower is better)
Translates to: APTLCLLGSREL*VGLQPTRVVTH
Trigger: GTGAGTGACCACACGTGTGGGTTGGAGTCCCACCCAAAGCTCCCTGGACCCTAGAAGGCATAGGGTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS CAA 72 bp GATTGCAGGTGGCTCAGCTCCCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACCAGCAGCTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: DCRWLSSRWTFS*SPRVDTSSSSW
Trigger: CCAGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 72 bp ACGGGTGGAGACGCTGCAGACAGCAGCAAAGGGGAGTaGGATCTCCCGAAGGTAGGAAAGCAGCCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: TGGDAADSSKGE*DLPKVGKQPPA
Trigger: GGCAGGGGGCTGCTTTCCTACCTTCGGGAGATCCAACTCCCCTTTGCTGCTGTCTGCAGCGTCTCCACCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675023.1
CDS GCA 72 bp CGTTTTCGCTGGTGTCCACTGACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGACAGCATGGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: RFRWCPLTSCSR*NSDSRDSMVAT
Trigger: GGTGGCCACCATGCTGTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp CGTTTTCGCTGGTGTCCACTGACCTCCTGTAGCCGCTaGAACTCAGACTCCAGGGACAGCATGGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RFRWCPLTSCSR*NSDSRDSMVAW
Trigger: CCAGGCCACCATGCTGTCCCTGGAGTCTGAGTTGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676242.1
CDS CCA 72 bp GCATCGTTCTCTGATTGCAGGTGGCTCAGCTCCCGCTaGACCTTCTCGTTGTCTCCTCGGGTGGACACCAGC +
Preference number: 6 (lower is better)
Translates to: ASFSDCRWLSSR*TFSLSPRVDTS
Trigger: GCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675984.1
ENST00000676081.1
ENST00000676242.1
ENST00000676352.1
ENST00000676457.1
CDS CAA 72 bp CGGAATCGGCAGAGCACCTTGATGCTACATTCGTTGTaGGTCTCCGCCATGGTGGTAGCCGGCGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RNRQSTLMLHSL*VSAMVVAGVGL
Trigger: CAGCCCCACGCCGGCTACCACCATGGCGGAGACCAACAACGAATGTAGCATCAAGGTGCTCTGCCGATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675023.1
ENST00000675216.1
ENST00000676359.1
ENST00000676457.1
CDS CAA 72 bp GATTGCAGGTGGCTCAGCTCCCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACCAGCAGCTTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: DCRWLSSRWTFS*SPRVDTSSFKG
Trigger: TCCCTTGAAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CAA 90 bp TCGTTCTCTGATTGCAGGTGGCTCAGCTCCCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACCAGCAGCTTCAAGGGAGAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SFSDCRWLSSRWTFS*SPRVDTSSFKGEEW
Trigger: CCACTCCTCTCCCTTGAAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CAA 90 bp CTGGTTCTAACGGGTGGAGACGCTGCAGACAGCAGCAAAGGGGAGTaGGATCTCCCGAAGGTAGGAAAGCAGCCCCCTGCCACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LVLTGGDAADSSKGE*DLPKVGKQPPATLQ
Trigger: CTGCAGAGTGGCAGGGGGCTGCTTTCCTACCTTCGGGAGATCCAACTCCCCTTTGCTGCTGTCTGCAGCGTCTCCACCCGTTAGAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675023.1
CDS TCA 72 bp TTAGGCACTCACCTGAGAGATGAGGAGCTGGCAGGATaGGAGCTCCCGCCCGGTCACTTCCATCTTGCGGTG +
Preference number: 6 (lower is better)
Translates to: LGTHLRDEELAG*ELPPGHFHLAV
Trigger: CACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTCATCTCTCAGGTGAGTGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675299.1
CDS GCA 72 bp TCTCCTCCTCGTATTTCTGCCGCTCCTCGGGCGCGATaGGCACCACGATGGATGAGTTGTCATTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: SPPRISAAPRAR*APRWMSCHSQG
Trigger: CCCCTGTGAATGACAACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGCGGCAGAAATACGAGGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp GTGCAGAGGTGCAGCCACCATACAGCCCTGGAAGGATaGAGAGGTCCCCTCGACATGGGAGATGTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: VQRCSHHTALEG*RGPLDMGDVLW
Trigger: CCACAGAACATCTCCCATGTCGAGGGGACCTCTGCATCCTTCCAGGGCTGTATGGTGGCTGCACCTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 72 bp TCAGCTCCCGCTGGACCTTCTCGTTGTCTCCTCGGGTaGACACCAGCAGCTCTTCCTGGTCCAGCATTTGCT +
Preference number: 6 (lower is better)
Translates to: SAPAGPSRCLLG*TPAALPGPAFA
Trigger: AGCAAATGCTGGACCAGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 72 bp GTCTGGAGTTCCCGGGCAACTGTCTCCTCCAGACCCTaGAGGTCCTGCTTGGACTGCTCATGTCGCTCGTAC +
Preference number: 6 (lower is better)
Translates to: VWSSRATVSSRP*RSCLDCSCRSY
Trigger: GTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCGGGAACTCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 90 bp TCGTTCTCTGATTGCAGGTGGCTCAGCTCCCGCTGGACCTTCTCGTaGTCTCCTCGGGTGGACACCAGCAGCTCTTCCTGGTCCAGCATT +
Preference number: 6 (lower is better)
Translates to: SFSDCRWLSSRWTFS*SPRVDTSSSSWSSI
Trigger: AATGCTGGACCAGGAAGAGCTGCTGGTGTCCACCCGAGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 90 bp TGGAGTTCCCGGGCAACTGTCTCCTCCAGACCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCGTACAGAAATGTCAGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WSSRATVSSRPLRSC*DCSCRSYRNVSSCS
Trigger: GCTGCAGGAGCTGACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCGGGAACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS TCA 72 bp TGCCCCTACCCAGCATGCACCAAACATTTCCTGTCCTaGCTCCTTTGGACTGCCCTTCTGCATCCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: CPYPACTKHFLS*LLWTALLHPQP
Trigger: GGGCTGGGGATGCAGAAGGGCAGTCCAAAGGAGTCAGGACAGGAAATGTTTGGTGCATGCTGGGTAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675397.1
ENST00000675984.1
ENST00000676081.1
CDS GCA 72 bp AGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAAAGCTGGATGGAGCAG +
Preference number: 6 (lower is better)
Translates to: RKPRGRQKMWLH*WYRSLQSWMEQ
Trigger: CTGCTCCATCCAGCTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552227.1
ENST00000675882.1
CDS CCA 72 bp ATTTCTGCCGCTCCTCGGGCGCGATGCGCACCACGATaGATGAGTTGTCATTCACAGGGGTCTCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: ISAAPRARCAPR*MSCHSQGSPHR
Trigger: TCTGTGAGGAGACCCCTGTGAATGACAACTCATCCATCGTGGTGCGCATCGCGCCCGAGGAGCGGCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp AAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGCTGGATGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: KPRGRQKMWLHC*YRSLQSWMEQR
Trigger: CCTCTGCTCCATCCAGCTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552227.1
ENST00000675882.1
CDS CCA 72 bp AGTCAATACAGCAAGGTGACAGGACCCGGGAGGGGCTaGAGTCGCCCTTGGGAACCCTTACTCTTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: SQYSKVTGPGRG*SRPWEPLLFEL
Trigger: GAGCTCAAAGAGTAAGGGTTCCCAAGGGCGACTCCAGCCCCTCCCGGGTCCTGTCACCTTGCTGTATTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 72 bp GTGACCCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: VTPESAGMQPWV*EISWLLSLGGE
Trigger: CTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674858.1
CDS CCA 72 bp GAGGGCACTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: EGTESAGMQPWV*EISWLLSLGGE
Trigger: CTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674980.1
CDS CCA 72 bp CCAGGGAGCTTTGGGTGGGACTCCAACCCACACGTGTaGTCACTCACTACATATCTGAGGTGGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PGSFGWDSNPHV*SLTTYLRWSWV
Trigger: CACCCAGCTCCACCTCAGATATGTAGTGAGTGACCACACGTGTGGGTTGGAGTCCCACCCAAAGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS GCA 72 bp GTTGATATTCTTTGCCTCGTCCAGCACGGCTCCCTCTaGTCCAGTCTTGCTGACCTTCTCACTCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VDILCLVQHGSL*SSLADLLTPCQ
Trigger: CTGGCAGGGAGTGAGAAGGTCAGCAAGACTGGAGCAGAGGGAGCCGTGCTGGACGAGGCAAAGAATATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS GCA 72 bp TCCCGGGCAACTGTCTCCTCCAGACCCTTGAGGTCCTaGTTGGACTGCTCATGTCGCTCGTACAGAAATGTC +
Preference number: 6 (lower is better)
Translates to: SRATVSSRPLRS*LDCSCRSYRNV
Trigger: GACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp GGGAACCCTTACTCTTTGAGCTCATCAATGGTCTTCTaGTTCTCGTTGATCTCGTCCCGGAGCCGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GNPYSLSSSMVF*FSLISSRSRAS
Trigger: GCTGGCCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGACCATTGATGAGCTCAAAGAGTAAGGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 72 bp ACCTCATCCTTAGCGGCATCGTTCTCTGATTGCAGGTaGCTCAGCTCCCGCTGGACCTTCTCGTTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: TSSLAASFSDCR*LSSRWTFSLSP
Trigger: AGGAGACAACGAGAAGGTCCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGCCGCTAAGGATGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675984.1
ENST00000676081.1
ENST00000676242.1
ENST00000676352.1
ENST00000676457.1
CDS CCA 72 bp GGATGCAGAGGTCCCCTCGACATGGGAGATGTTCTGTaGTCAGGGAGCTGTTGGACCATTGGCACACCACTT +
Preference number: 6 (lower is better)
Translates to: GCRGPLDMGDVL*SGSCWTIGTPL
Trigger: AAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGGGGACCTCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 72 bp AAGGTGACAGGACCCGGGAGGGGCTGGAGTCGCCCTTaGGAACCCTTACTCTTTGAGCTCATCAATGGTCTT +
Preference number: 6 (lower is better)
Translates to: KVTGPGRGWSRP*EPLLFELINGL
Trigger: AAGACCATTGATGAGCTCAAAGAGTAAGGGTTCCCAAGGGCGACTCCAGCCCCTCCCGGGTCCTGTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 72 bp CTTCCTCCTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: LPPESAGMQPWV*EISWLLSLGGE
Trigger: CTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675433.1
CDS CAA 72 bp CGGGCAACTGTCTCCTCCAGACCCTTGAGGTCCTGCTaGGACTGCTCATGTCGCTCGTACAGAAATGTCAGC +
Preference number: 6 (lower is better)
Translates to: RATVSSRPLRSC*DCSCRSYRNVS
Trigger: GCTGACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675929.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 90 bp CAGAGGTCCCCTCGACATGGGAGATGTTCTGTGGTCAGGGAGCTGTaGGACCATTGGCACACCACTTACCACCTTCTGAGACAGCTCATC +
Preference number: 6 (lower is better)
Translates to: QRSPRHGRCSVVREL*DHWHTTYHLLRQLI
Trigger: GATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGGGGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CAA 90 bp GTGCCCCTACCCAGCATGCACCAAACATTTCCTGTCCTGACTCCTTaGGACTGCCCTTCTGCATCCCCAGCCCATACCTTTGAAACCCAG +
Preference number: 6 (lower is better)
Translates to: VPLPSMHQTFPVLTP*DCPSASPAHTFETQ
Trigger: CTGGGTTTCAAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAGGAGTCAGGACAGGAAATGTTTGGTGCATGCTGGGTAGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675397.1
ENST00000675984.1
ENST00000676081.1
CDS CAA 90 bp AAATGGAGTGGGGGAAGGGGTGTTGTTGGATGCTGGGTAGTGAGGTaGGGTGGTCACTGCTTCTACCTGCAGGCCAGGAATGAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: KWSGGRGVVGCWVVR*GGHCFYLQARNEPD
Trigger: ATCTGGCTCATTCCTGGCCTGCAGGTAGAAGCAGTGACCACCCAACCTCACTACCCAGCATCCAACAACACCCCTTCCCCCACTCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS CAA 90 bp ACCAATAACTGCCCCCACCCTATGCCTTCTAGGGTCCAGGGAGCTTaGGGTGGGACTCCAACCCACACGTGTGGTCACTCACTACATATC +
Preference number: 6 (lower is better)
Translates to: TNNCPHPMPSRVQGA*GGTPTHTCGHSLHI
Trigger: GATATGTAGTGAGTGACCACACGTGTGGGTTGGAGTCCCACCCAAAGCTCCCTGGACCCTAGAAGGCATAGGGTGGGGGCAGTTATTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS TCA 72 bp TTCCGCTGTCATCCCTACCCCTTGAGACATGGGAACTaGCATACTGTTGACTCACGGGGCAGGTGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: FRCHPYPLRHGN*HTVDSRGRWRR
Trigger: TCTCCTCCACCTGCCCCGTGAGTCAACAGTATGTCAGTTCCCATGTCTCAAGGGGTAGGGATGACAGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS GCA 72 bp GACTCTTCCAGGTGCCGCTTCTTTAGCTCCACGCTCTaGATGTATTCCGTAAGCGAGCGGATCTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: DSSRCRFFSSTL*MYSVSERILAS
Trigger: TGAGGCCAAGATCCGCTCGCTTACGGAATACATGCAGAGCGTGGAGCTAAAGAAGCGGCACCTGGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp ACTGTCTCCTCCAGACCCTTGAGGTCCTGCTTGGACTaGTCATGTCGCTCGTACAGAAATGTCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: TVSSRPLRSCLD*SCRSYRNVSSC
Trigger: GCAGGAGCTGACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp ATCAGCCCGTTCAGCACCTCAGCAATTCGTTTTCGCTaGTGTCCACTGACCTCCTGTAGCCGCTGCAACTCA +
Preference number: 6 (lower is better)
Translates to: ISPFSTSAIRFR*CPLTSCSRCNS
Trigger: TGAGTTGCAGCGGCTACAGGAGGTCAGTGGACACCAGCGAAAACGAATTGCTGAGGTGCTGAACGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676242.1
ENST00000676457.1
CDS CAA 72 bp GCCCCACTGATCTCCACTGGCAGCTTAATCTCCCCGTaGCCCACAATGACACTGAACTCGCTCAGATCCTTC +
Preference number: 6 (lower is better)
Translates to: APLISTGSLISP*PTMTLNSLRSF
Trigger: GAAGGATCTGAGCGAGTTCAGTGTCATTGTGGGCAACGGGGAGATTAAGCTGCCAGTGGAGATCAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 90 bp CCCTCGACATGGGAGATGTTCTGTGGTCAGGGAGCTGTTGGACCATaGGCACACCACTTACCACCTTCTGAGACAGCTCATCCACCAGAA +
Preference number: 6 (lower is better)
Translates to: PSTWEMFCGQGAVGP*AHHLPPSETAHPPE
Trigger: TTCTGGTGGATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCCATGTCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS TCA 72 bp AGCTGTTGGACCATTGGCACACCACTTACCACCTTCTaGGACAGCTCATCCACCAGAAGCTGGTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SCWTIGTPLTTF*DSSSTRSWFCW
Trigger: CCAGCAGAACCAGCTTCTGGTGGATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS GCA 72 bp CGGGTGGACACCAGCAGCTCTTCCTGGTCCAGCATTTaGTGCTTGAGCTTCTCTATGAGTTGGCTTTGTTGG +
Preference number: 6 (lower is better)
Translates to: RVDTSSSSWSSI*CLSFSMSWLCW
Trigger: CCAACAAAGCCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCAGGAAGAGCTGCTGGTGTCCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp AGGAAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTaGTGGTACAGGAGTTTGCAAAGTACATATCTGAGG +
Preference number: 6 (lower is better)
Translates to: RKPRGRQKMWLH*WYRSLQSTYLR
Trigger: CCTCAGATATGTACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS GCA 72 bp GAAAAACATGGGACTGGTTCTAACGGGTGGAGACGCTaGAGACAGCAGCAAAGGGGAGTTGGATCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: EKHGTGSNGWRR*RQQQRGVGSPE
Trigger: TTCGGGAGATCCAACTCCCCTTTGCTGCTGTCTGCAGCGTCTCCACCCGTTAGAACCAGTCCCATGTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675023.1
CDS CCA 72 bp AAGCCAAGGGGCCGCCAGAAGATGTGGCTCCACTGCTaGTACAGGAGTTTGCAAAGTACATATCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: KPRGRQKMWLHC*YRSLQSTYLRW
Trigger: CCACCTCAGATATGTACTTTGCAAACTCCTGTACCAGCAGTGGAGCCACATCTTCTGGCGGCCCCTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 72 bp GGGAGATGTTCTGTGGTCAGGGAGCTGTTGGACCATTaGCACACCACTTACCACCTTCTGAGACAGCTCATC +
Preference number: 6 (lower is better)
Translates to: GRCSVVRELLDH*HTTYHLLRQLI
Trigger: GATGAGCTGTCTCAGAAGGTGGTAAGTGGTGTGCCAATGGTCCAACAGCTCCCTGACCACAGAACATCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS CCA 72 bp ACCAAGGAGAGGAAAAGGGAACTGGAAGGCAAGGGCTaGGATTGGCGTGGTAATAGGAGGAATCCACTCCCA +
Preference number: 6 (lower is better)
Translates to: TKERKRELEGKG*DWRGNRRNPLP
Trigger: TGGGAGTGGATTCCTCCTATTACCACGCCAATCCCAGCCCTTGCCTTCCAGTTCCCTTTTCCTCTCCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675737.1
CDS CAA 72 bp CACTCCACCTGGAGGTTCTCCAGCTGCCGGCACCGCTaGACCACAGACTTGACTTCTGATTTGATTTTGCTG +
Preference number: 6 (lower is better)
Translates to: HSTWRFSSCRHR*TTDLTSDLILL
Trigger: CAGCAAAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCGGTGCCGGCAGCTGGAGAACCTCCAGGTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675299.1
ENST00000675629.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676352.1
ENST00000676457.1
CDS CAA 72 bp GGAGGGGCTGGAGTCGCCCTTGGGAACCCTTACTCTTaGAGCTCATCAATGGTCTTCTGCTTCTCGTTGATC +
Preference number: 6 (lower is better)
Translates to: GGAGVALGNPYS*SSSMVFCFSLI
Trigger: GATCAACGAGAAGCAGAAGACCATTGATGAGCTCAAAGAGTAAGGGTTCCCAAGGGCGACTCCAGCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CAA 72 bp CCCAGCATGCACCAAACATTTCCTGTCCTGACTCCTTaGGACTGCCCTTCTGCATCCCCAGCCCATACCTTT +
Preference number: 6 (lower is better)
Translates to: PSMHQTFPVLTP*DCPSASPAHTF
Trigger: AAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAGGAGTCAGGACAGGAAATGTTTGGTGCATGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675397.1
ENST00000675984.1
ENST00000676081.1
CDS CAA 72 bp GGTCGTGCAGCTTTCCCGTTTACTGTCAGGTCCCAATaGTTTCCGCTGTCATCCCTACCCCTTGAGACATGG +
Preference number: 6 (lower is better)
Translates to: GRAAFPFTVRSQ*FPLSSLPLETW
Trigger: CCATGTCTCAAGGGGTAGGGATGACAGCGGAAACAATTGGGACCTGACAGTAAACGGGAAAGCTGCACGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS TCA 72 bp CAGGTCCCAATTGTTTCCGCTGTCATCCCTACCCCTTaGGACATGGGAACTGACATACTGTTGACTCACGGG +
Preference number: 6 (lower is better)
Translates to: QVPIVSAVIPTP*DMGTDILLTHG
Trigger: CCCGTGAGTCAACAGTATGTCAGTTCCCATGTCTCAAGGGGTAGGGATGACAGCGGAAACAATTGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676250.1
CDS GCA 72 bp CAACCCTTGACAAATGGCACCCGGTTCTTGTCCTCGTaGACGGACAGATTTGTCTTGGTCACATCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QPLTNGTRFLSS*TDRFVLVTSRR
Trigger: CCTTCTGGATGTGACCAAGACAAATCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS GCA 72 bp GTCGCTCGTACAGAAATGTCAGCTCCTGCAGCTTGGTaGTCTTCTCGTGTTCTTCGCTCTTCAGCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: VARTEMSAPAAW*SSRVLRSSASR
Trigger: ACGAGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCTGTACGAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp CCTAGCCAGGGACATCATTTAATGTCCCTGCATGCCTaGCACAGACCTAGACAGATGGAGTTCTCTCCACGA +
Preference number: 6 (lower is better)
Translates to: PSQGHHLMSLHA*HRPRQMEFSPR
Trigger: TCGTGGAGAGAACTCCATCTGTCTAGGTCTGTGGCAGGCATGCAGGGACATTAAATGATGTCCCTGGCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CCA 72 bp TTAGAAACTGAAAGTGCAGGTATGCAGCCGTGGGTGTaGGAGATTAGCTGGCTGCTGTCTCTTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: LETESAGMQPWV*EISWLLSLGGE
Trigger: CTCTCCACCAAGAGACAGCAGCCAGCTAATCTCCCACACCCACGGCTGCATACCTGCACTTTCAGTTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675697.1
ENST00000675737.1
ENST00000675882.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 72 bp CACGTGTGGTCACTCACTACATATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCT +
Preference number: 6 (lower is better)
Translates to: HVWSLTTYLRWS*VWPAGRDSGSS
Trigger: AGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTAGTGAGTGACCACACGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS CAA 72 bp CCACTGAGCTTCTGCTCCGTTTCCATGTTCTCCTGCTaGATGTTGATGAGGAAGATGCTGTGGCTCCGAGAG +
Preference number: 6 (lower is better)
Translates to: PLSFCSVSMFSC*MLMRKMLWLRE
Trigger: CTCTCGGAGCCACAGCATCTTCCTCATCAACATCAAGCAGGAGAACATGGAAACGGAGCAGAAGCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS CAA 72 bp CTTTGGACTGCCCTTCTGCATCCCCAGCCCATACCTTaGAAACCCAGTCATCCACCTAAAGAACCGCAACAG +
Preference number: 6 (lower is better)
Translates to: LWTALLHPQPIP*KPSHPPKEPQQ
Trigger: CTGTTGCGGTTCTTTAGGTGGATGACTGGGTTTCAAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CAA 90 bp ATTTGGCACAGAAGGGAACCACTCACAACTGTCTCCTCCAGACCCTaGAGGTCCTGCTTGGACTGCTCATGTCGCTCGTACAGAAATGTC +
Preference number: 6 (lower is better)
Translates to: IWHRREPLTTVSSRP*RSCLDCSCRSYRNV
Trigger: GACATTTCTGTACGAGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAGGAGACAGTTGTGAGTGGTTCCCTTCTGTGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675882.1
ENST00000675984.1
CDS GCA 72 bp GTGGACACCAGCAGCTCTTCCTGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGTTGGCTTTGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: VDTSSSSWSSIC*LSFSMSWLCWL
Trigger: CAACCAACAAAGCCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCAGGAAGAGCTGCTGGTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS GCA 72 bp ATGCACCAAACATTTCCTGTCCTGACTCCTTTGGACTaGCCTTCTGCATCCCCAGCCCATACCTTTGAAACC +
Preference number: 6 (lower is better)
Translates to: MHQTFPVLTPLD*PSASPAHTFET
Trigger: GGTTTCAAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAGGAGTCAGGACAGGAAATGTTTGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675397.1
ENST00000675984.1
ENST00000676081.1
CDS CCA 72 bp TGGTCTTTGCCCGCTGCCCAAACATCAGGGTGGACTTaGTCTCTGCATCATTATAACTGGATGGTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: WSLPAAQTSGWT*SLHHYNWMVSN
Trigger: GTTGCTCACCATCCAGTTATAATGATGCAGAGACCAAGTCCACCCTGATGTTTGGGCAGCGGGCAAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp CATGTCGCTCGTACAGAAATGTCAGCTCCTGCAGCTTaGTGCTCTTCTCGTGTTCTTCGCTCTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: HVARTEMSAPAA*CSSRVLRSSAS
Trigger: AGAAGCTGAAGAGCGAAGAACACGAGAAGAGCACCAAGCTGCAGGAGCTGACATTTCTGTACGAGCGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675397.1
ENST00000675882.1
ENST00000675929.1
ENST00000675984.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp TGGTCACTCACTACATATCTGAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: WSLTTYLRWSWV*PAGRDSGSSGR
Trigger: TCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTAGTGAGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675882.1
CDS CAA 72 bp CGTTCAGTACAACCCTTGACAAATGGCACCCGGTTCTaGTCCTCGTGCACGGACAGATTTGTCTTGGTCACA +
Preference number: 6 (lower is better)
Translates to: RSVQPLTNGTRF*SSCTDRFVLVT
Trigger: TGTGACCAAGACAAATCTGTCCGTGCACGAGGACAAGAACCGGGTGCCATTTGTCAAGGGTTGTACTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS CAA 72 bp AGCTTCTGCTCCGTTTCCATGTTCTCCTGCTTGATGTaGATGAGGAAGATGCTGTGGCTCCGAGAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: SFCSVSMFSCLM*MRKMLWLRELC
Trigger: ACACAGCTCTCGGAGCCACAGCATCTTCCTCATCAACATCAAGCAGGAGAACATGGAAACGGAGCAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS CAA 72 bp ACCTCTCCCTCCAAGGTAGGCCTGGGGAATTCCACTTaGAGCAGAGGTGGGTTAGAAACTTTGAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: TSPSKVGLGNST*SRGGLETLRRE
Trigger: TTCCCTTCTCAAAGTTTCTAACCCACCTCTGCTCAAAGTGGAATTCCCCAGGCCTACCTTGGAGGGAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CAA 72 bp CTTTGGACTGCCCTTCTGCATCCCCAGCCCATACCTTaGAAACCCAGTCATCCACCTGTTTGTGAACCTTTG +
Preference number: 6 (lower is better)
Translates to: LWTALLHPQPIP*KPSHPPVCEPL
Trigger: CAAAGGTTCACAAACAGGTGGATGACTGGGTTTCAAAGGTATGGGCTGGGGATGCAGAAGGGCAGTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675397.1
CDS TCA 72 bp AGGTGGGGCTACGAAGTTGTGGCATTGTTGAGGGAATaGCACATGGATGTTAAAGAATCAGACCCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: RWGYEVVALLRE*HMDVKESDPEG
Trigger: CCCCTCTGGGTCTGATTCTTTAACATCCATGTGTCATTCCCTCAACAATGCCACAACTTCGTAGCCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS CAA 72 bp ATGGCACCCGGTTCTTGTCCTCGTGCACGGACAGATTaGTCTTGGTCACATCCAGAAGGTCACGAATTTTGT +
Preference number: 6 (lower is better)
Translates to: MAPGSCPRARTD*SWSHPEGHEFC
Trigger: ACAAAATTCGTGACCTTCTGGATGTGACCAAGACAAATCTGTCCGTGCACGAGGACAAGAACCGGGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676457.1
CDS TCA 72 bp GGTGGACTTGGTCTCTGCATCATTATAACTGGATGGTaGGCAACAGATGAACATAGTCGTCCGGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: GGLGLCIIITGW*ATDEHSRPAVS
Trigger: GGAAACTGCCGGACGACTATGTTCATCTGTTGCTCACCATCCAGTTATAATGATGCAGAGACCAAGTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp AGTTTGCAAAGTACATATCTGAGGTGGAGCTGGGTGTaGCCTGCAGGTAGAGATTCTGGTAGTTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: SLQSTYLRWSWV*PAGRDSGSSGR
Trigger: TCTTCCAGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTACTTTGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS CCA 72 bp TACAGGAGTTTGCAAAGTACATATCTGAGGTGGAGCTaGGTGTGGCCTGCAGGTAGAGATTCTGGTAGTTCT +
Preference number: 6 (lower is better)
Translates to: YRSLQSTYLRWS*VWPAGRDSGSS
Trigger: AGAACTACCAGAATCTCTACCTGCAGGCCACACCCAGCTCCACCTCAGATATGTACTTTGCAAACTCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675737.1
ENST00000675929.1
ENST00000676457.1
CDS CAA 90 bp TGTGGAGGGTCTGGAGTTCCCGGGCCTGGAAAGAATGATGAAAAATaGGGAATAGCCAGATACCAGGTCTGTCCTATTCCTCCAGAATTA +
Preference number: 6 (lower is better)
Translates to: CGGSGVPGPGKNDEK*GIARYQVCPIPPEL
Trigger: TAATTCTGGAGGAATAGGACAGACCTGGTATCTGGCTATTCCCAATTTTTCATCATTCTTTCCAGGCCCGGGAACTCCAGACCCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675882.1
ENST00000675984.1
CDS TCA 72 bp GGAATACAGGGAAACTCAAGGCCAGAGGGATGTAAATaGCTTGTCCAATGTCACAAGGCTTCCAAAGGTAGG +
Preference number: 6 (lower is better)
Translates to: GIQGNSRPEGCK*LVQCHKASKGR
Trigger: CCTACCTTTGGAAGCCTTGTGACATTGGACAAGTCATTTACATCCCTCTGGCCTTGAGTTTCCCTGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000675737.1
ENST00000675882.1
ENST00000675929.1
ENST00000676437.1
CDS GCA 72 bp TTGAGACTCCATCTCTCTTCCTGGTCCAGCATTTGCTaGTTGAGCTTCTCTATGAGTTGGCTTTGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: LRLHLSSWSSIC*LSFSMSWLCWL
Trigger: CAACCAACAAAGCCAACTCATAGAGAAGCTCAAGCAGCAAATGCTGGACCAGGAAGAGAGATGGAGTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674653.1
CDS CAA 72 bp TCTGGAGTTCCCGGGCCTGGAAAGAATGATGAAAAATaGGGAATAGCCAGATACCAGGTCTGTCCTATTCCT +
Preference number: 6 (lower is better)
Translates to: SGVPGPGKNDEK*GIARYQVCPIP
Trigger: AGGAATAGGACAGACCTGGTATCTGGCTATTCCCAATTTTTCATCATTCTTTCCAGGCCCGGGAACTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675882.1
ENST00000675984.1
CDS TCA 72 bp CATGCACAGTTTCTAAGGGAAAGAGGGGAAGACAGCTaGCATCAAACCTACCTCTTTCGGAAAGAACTTCAC +
Preference number: 6 (lower is better)
Translates to: HAQFLRERGEDS*HQTYLFRKELH
Trigger: GTGAAGTTCTTTCCGAAAGAGGTAGGTTTGATGTCAGCTGTCTTCCCCTCTTTCCCTTAGAAACTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675984.1
CDS TCA 72 bp CGTACCAGCTTTGAAACCCAGTCATCCACCTGTTTGTaGACCTTTGTAAGCTGTTCCAGGTTGTTCTCAAGA +
Preference number: 6 (lower is better)
Translates to: RTSFETQSSTCL*TFVSCSRLFSR
Trigger: TCTTGAGAACAACCTGGAACAGCTTACAAAGGTTCACAAACAGGTGGATGACTGGGTTTCAAAGCTGGTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS CAA 72 bp TTTTCCAATTTAGGAAGCTCACAACGCAGATCTGCATaGTCACGTACCAGCTTTGAAACCCAGTCATCCACC +
Preference number: 6 (lower is better)
Translates to: FSNLGSSQRRSA*SRTSFETQSST
Trigger: GGTGGATGACTGGGTTTCAAAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAGCTTCCTAAATTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674619.1
CDS GCA 72 bp TCGTTTTTCCAATTTAGGAAGCTCACAACGCAGATCTaGATTGTCACGTACCAGCTTTGTAAGCTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: SFFQFRKLTTQI*IVTYQLCKLFQ
Trigger: CTGGAACAGCTTACAAAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAGCTTCCTAAATTGGAAAAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675907.1
CDS CAA 72 bp TTTTCCAATTTAGGAAGCTCACAACGCAGATCTGCATaGTCACGTACCAGCTTTGTAAGCTGTTCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: FSNLGSSQRRSA*SRTSFVSCSRL
Trigger: CAACCTGGAACAGCTTACAAAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAGCTTCCTAAATTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675907.1
CDS TCA 72 bp AGGCCAGCTCTTCAAACTTCTTCCTTTTTGAACGAGTaGGTCCAGTTAGAATTGATGTGTCCACCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: RPALQTSSFLNE*VQLELMCPPSD
Trigger: ATCTGAAGGTGGACACATCAATTCTAACTGGACTCACTCGTTCAAAAAGGAAGAAGTTTGAAGAGCTGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1
CDS GCA 72 bp TCGTTTTTCCAATTTAGGAAGCTCACAACGCAGATCTaGATTGTCACGTACCAGCTGTTTGTGAACCTTTGT +
Preference number: 6 (lower is better)
Translates to: SFFQFRKLTTQI*IVTYQLFVNLC
Trigger: ACAAAGGTTCACAAACAGCTGGTACGTGACAATGCAGATCTGCGTTGTGAGCTTCCTAAATTGGAAAAACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000675882.1
ENST00000675929.1
ENST00000676457.1
CDS CAA 72 bp CATTTGCTGCTTGAGCTTCTCTATGAGTTGGCTTTGTaGGTTGATTTCATCATCCTTGTCGTCAAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: HLLLELLYELAL*VDFIILVVKLL
Trigger: AAGCAGCTTGACGACAAGGATGATGAAATCAACCAACAAAGCCAACTCATAGAGAAGCTCAAGCAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CCA 72 bp ATTTGCTGCTTGAGCTTCTCTATGAGTTGGCTTTGTTaGTTGATTTCATCATCCTTGTCGTCAAGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: ICCLSFSMSWLC*LISSSLSSSCL
Trigger: TAAGCAGCTTGACGACAAGGATGATGAAATCAACCAACAAAGCCAACTCATAGAGAAGCTCAAGCAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286452.5
ENST00000455537.7
ENST00000674619.1
ENST00000675882.1
ENST00000676081.1
ENST00000676457.1
CDS CAA 72 bp AGCCTTGGCACACCAGAAAGGTTCAGTCAGTGTTTTTaGTACACTAAGGTCACTTACTTTTATGCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: SLGTPERFSQCF*YTKVTYFYASQ
Trigger: TTGAGAGGCATAAAAGTAAGTGACCTTAGTGTACAAAAAACACTGACTGAACCTTTCTGGTGTGCCAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675737.1
CDS CCA 72 bp GGGAATACAGGCATGAAACAAAGAACAAGGTACAAGTaGACCAAATATGGTATAAAGAAGGGATTAGTAGGG +
Preference number: 6 (lower is better)
Translates to: GNTGMKQRTRYK*TKYGIKKGLVG
Trigger: CCCTACTAATCCCTTCTTTATACCATATTTGGTCCACTTGTACCTTGTTCTTTGTTTCATGCCTGTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675984.1
ENST00000676081.1