RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF3B (Homo sapiens)

Ensembl gene IDs: ENSG00000101350

Ensembl transcript IDs: ENST00000375712.4

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCGCCACCTTCCTGAGGCACCGTGCCAGCAAGGTGCACCAGTGTaGCAGACCTGGAGACTCACTGTCCCCTCAGGCTTGGCTCATGGA +
Preference number: 1 (lower is better)
Translates to: SRHLPEAPCQQGAPV*QTWRLTVPSGLAHG
Trigger: TCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAGGTGGCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp AAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTCTGGCGCCCTTaGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCA +
Preference number: 1 (lower is better)
Translates to: KQRAAHAPVAALWRP*SWRCGWSNSSSMQA
Trigger: TGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp TGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTaGAGCACTCTGGCGCCCTTGGTCATGGAGGTGTGGGTGGAGCAA +
Preference number: 1 (lower is better)
Translates to: CQSQTGKAESGPRPS*STLAPLVMEVWVEQ
Trigger: TTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp CTTCCTGAGGCACCGTGCCAGCAAGGTGCACCAGTGTGGCAGACCTaGAGACTCACTGTCCCCTCAGGCTTGGCTCATGGACTCAGACAC +
Preference number: 1 (lower is better)
Translates to: LPEAPCQQGAPVWQT*RLTVPSGLAHGLRH
Trigger: GTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp AGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTCTaGCGCCCTTGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGC +
Preference number: 1 (lower is better)
Translates to: RQEKQRAAHAPVAAL*RPWSWRCGWSNSSS
Trigger: GCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp GTGCACCAGTGTGGCAGACCTGGAGACTCACTGTCCCCTCAGGCTTaGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: VHQCGRPGDSLSPQA*LMDSDTHMGMLPAW
Trigger: CCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp CCACGCCCCAGTTGCAGCACTCTGGCGCCCTTGGTCATGGAGGTGTaGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAATA +
Preference number: 1 (lower is better)
Translates to: PRPSCSTLAPLVMEV*VEQFKQHAGIGREI
Trigger: TATTTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp TCCTCACTGAGCAGGTCCCAAAGGCAGATCCACTTCTTACTGAGGTaGATGGAAGCAAGACTGCTGATGGTGCCCACCTGGGGCCTGGAT +
Preference number: 1 (lower is better)
Translates to: SSLSRSQRQIHFLLR*MEARLLMVPTWGLD
Trigger: ATCCAGGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCCATGCACCTCAGTAAGAAGTGGATCTGCCTTTGGGACCTGCTCAGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp AGTGTGGCAGACCTGGAGACTCACTGTCCCCTCAGGCTTGGCTCATaGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATTAGTC +
Preference number: 1 (lower is better)
Translates to: SVADLETHCPLRLGS*TQTPTWECFQPGLV
Trigger: GACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp AGAGAAGGCAGAGACAGCCTCCTTTCTTCCACAAAACAGGCCCACTaGAGAGCATGCTCTGGATGCAGAGGATGGGCCCACACAAGGATG +
Preference number: 1 (lower is better)
Translates to: REGRDSLLSSTKQAH*RACSGCRGWAHTRM
Trigger: CATCCTTGTGTGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCTGTCTCTGCCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp CTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATaGAGAGGATGGGCCCACACAAGGATGTTCAGAGTATGCGTGCAT +
Preference number: 1 (lower is better)
Translates to: LLSSTKQAHCRACSG*RGWAHTRMFRVCVH
Trigger: ATGCACGCATACTCTGAACATCCTTGTGTGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp TCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAGGATaGGCCCACACAAGGATGTTCAGAGTATGCGTGCATGGGAAAAGA +
Preference number: 1 (lower is better)
Translates to: STKQAHCRACSGCRG*AHTRMFRVCVHGKR
Trigger: TCTTTTCCCATGCACGCATACTCTGAACATCCTTGTGTGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp GTTGATCTGCAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGTTCTaGGTTTGGGCCGAATCCTCTCTGCAGCTTTTTGCTAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: VDLQRGHRFSSGEQF*VWAESSLQLFASLF
Trigger: GAAGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp TGTCCCCTCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATaGTTCCAGCCTGGATTAGTCATTCAATGGGCCTTCAATACAGAC +
Preference number: 1 (lower is better)
Translates to: CPLRLGSWTQTPTWE*FQPGLVIQWAFNTD
Trigger: GTCTGTATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp GGGCTGAGTGCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTTaGTTGATCTGCAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGT +
Preference number: 1 (lower is better)
Translates to: GLSARLGTARSTRLS*LICKEATASPQGNS
Trigger: ACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGCACTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp ACTCACTGTCCCCTCAGGCTTGGCTCATGGACTCAGACACCCACATaGGAATGCTTCCAGCCTGGATTAGTCATTCAATGGGCCTTCAAT +
Preference number: 1 (lower is better)
Translates to: THCPLRLGSWTQTPT*ECFQPGLVIQWAFN
Trigger: ATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp GGAAGCAAGACTGCTGATGGTGCCCACCTGGGGCCTGGATCCAAATaGGATTTCTCATTTCTCCCTACAAGAACAGGCACCTATTCAAGT +
Preference number: 1 (lower is better)
Translates to: GSKTADGAHLGPGSK*DFSFLPTRTGTYSS
Trigger: ACTTGAATAGGTGCCTGTTCTTGTAGGGAGAAATGAGAAATCGCATTTGGATCCAGGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp GGGAATCGACACTTCTCAGAAACTTGGCAACGATTCTACATTCAGTaGGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGC +
Preference number: 1 (lower is better)
Translates to: GNRHFSETWQRFYIQ*GRTCQSQTGKAESG
Trigger: GCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTGTCGATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp GTAGCCAAAGAGAAGGTCAAGATCAGTAATAACTTCAAGGAGCCATaGAGCCCACTGCCTCCTGCCTGCCCCAGGATCACTCCTTTCATA +
Preference number: 1 (lower is better)
Translates to: VAKEKVKISNNFKEP*SPLPPACPRITPFI
Trigger: TATGAAAGGAGTGATCCTGGGGCAGGCAGGAGGCAGTGGGCTTCATGGCTCCTTGAAGTTATTACTGATCTTGACCTTCTCTTTGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp TTCTTACTGAGGTGCATGGAAGCAAGACTGCTGATGGTGCCCACCTaGGGCCTGGATCCAAATGCGATTTCTCATTTCTCCCTACAAGAA +
Preference number: 1 (lower is better)
Translates to: FLLRCMEARLLMVPT*GLDPNAISHFSLQE
Trigger: TTCTTGTAGGGAGAAATGAGAAATCGCATTTGGATCCAGGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCCATGCACCTCAGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp ACTGTCATTTTATCCCGAGGCTCCAAAGATGTGGTCCTGCTAAGGTaGCTCCTGATTCTGCCCTATTGTTCAACAAGAAGGGAGCCCCAT +
Preference number: 1 (lower is better)
Translates to: TVILSRGSKDVVLLR*LLILPYCSTRREPH
Trigger: ATGGGGCTCCCTTCTTGTTGAACAATAGGGCAGAATCAGGAGTCACCTTAGCAGGACCACATCTTTGGAGCCTCGGGATAAAATGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp GCTTCTCCTCAGGGGAACAGTTCTGAGTTTGGGCCGAATCCTCTCTaGAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTT +
Preference number: 1 (lower is better)
Translates to: ASPQGNSSEFGPNPL*SFLLVSSLRRQMLF
Trigger: AAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTGAGGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp GCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTTGGTTGATCTaGAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGTTCTGAGTTT +
Preference number: 1 (lower is better)
Translates to: ARLGTARSTRLSWLI*KEATASPQGNSSEF
Trigger: AAACTCAGAACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp GCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTaGATTAGTCATTCAATGGGCCTTCAATACAGACAAAAGGCAACA +
Preference number: 1 (lower is better)
Translates to: AWLMDSDTHMGMLPA*ISHSMGLQYRQKAT
Trigger: TGTTGCCTTTTGTCTGTATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp TCTGAGGTGTTGTCTCCAGTACGCCTCAACCTCAAGTGGGAAATGTaGGGCAGAACTGATATCCATGTTAACAGGGAATCGACACTTCTC +
Preference number: 1 (lower is better)
Translates to: SEVLSPVRLNLKWEM*GRTDIHVNRESTLL
Trigger: GAGAAGTGTCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGAGGCGTACTGGAGACAACACCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp GCCCACACAAGGATGTTCAGAGTATGCGTGCATGGGAAAAGATGGTaGCAAATGAAGAGTAAAGTGACATGGTGTATGGACATGGCACCA +
Preference number: 1 (lower is better)
Translates to: AHTRMFRVCVHGKRW*QMKSKVTWCMDMAP
Trigger: TGGTGCCATGTCCATACACCATGTCACTTTACTCTTCATTTGTCACCATCTTTTCCCATGCACGCATACTCTGAACATCCTTGTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 90 bp CAGACACCCACATGGGAATGCTTCCAGCCTGGATTAGTCATTCAATaGGCCTTCAATACAGACAAAAGGCAACAACTGCACATTAGTGTA +
Preference number: 1 (lower is better)
Translates to: QTPTWECFQPGLVIQ*AFNTDKRQQLHISV
Trigger: TACACTAATGTGCAGTTGTTGCCTTTTGTCTGTATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 90 bp TTTCTTTCCACAGACCACCACATGAACACAGCTGAGTACAAGGCATaGCTGTCAACTTGTCTGTCTTCTCTTAGAAAAGTTCTATGTGTC +
Preference number: 1 (lower is better)
Translates to: FLSTDHHMNTAEYKA*LSTCLSSLRKVLCV
Trigger: GACACATAGAACTTTTCTAAGAGAAGACAGACAAGTTGACAGGCATGCCTTGTACTCAGCTGTGTTCATGTGGTGGTCTGTGGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 90 bp GACATTCTACAATCTGCTCTATTCAAATATTTATCGGATCCATTTTaGGAGAAGAAAAGCACCAGAGACTGCTTGGAAAGGGACAGCTTC +
Preference number: 1 (lower is better)
Translates to: DILQSALFKYLSDPF*EKKSTRDCLERDSF
Trigger: GAAGCTGTCCCTTTCCAAGCAGTCTCTGGTGCTTTTCTTCTCTCAAAATGGATCCGATAAATATTTGAATAGAGCAGATTGTAGAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp AAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTCTGGCGCCCTaGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGC +
Preference number: 2 (lower is better)
Translates to: KAESGPRPSCSTLAP*VMEVWVEQFKQHAG
Trigger: GCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp TTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTaGCAGCACTCTGGCGCCCTTGGTCATGGAGGTGTGGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: LSESDRKSRERPTPQ*QHSGALGHGGVGGA
Trigger: TGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp GGTGCACCAGTGTGGCAGACCTGGAGACTCACTGTCCCCTCAGGCTaGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GAPVWQTWRLTVPSG*AHGLRHPHGNASSL
Trigger: CAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCCCTGCCCACTGCACTaGGTCTCATGTCTCCATCTC +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQPCPLH*VSCLHL
Trigger: GAGATGGAGACATGAGACTCAGTGCAGTGGGCAGGG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGTTTCCCATGGGTTCTaGTCCAGAAATGTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQVSHGF*SRNVPW
Trigger: CCAGGGCACATTTCTGGATCAGAACCCATGGGAAAC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAATCTGGCTTTGCTAGCTaGTGCCGGCATGAAGGCCCT +
Preference number: 2 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRESGFAS*CRHEGP
Trigger: AGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGA...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCTGCAGAGCATGCTCTaGATGCAGAGGATGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTLQSML*MQRMGP
Trigger: TGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTCAGGGGAACAGTTCTaGGTTTGGGCCGAATCCTCT +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGSGEQF*VWAESS
Trigger: AGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTGA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGCCACAGACCACCACATaGACACAGCTGAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGPQTTT*TQLSTR
Trigger: CCTTGTACTCAGCTGTGTTCATGTGGTGGTCTGTGG...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGACAAAACAGGCCCACTaGAGAGCATGCTCTGGATGC +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGTKQAH*RACSGC
Trigger: GCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGT...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATACACAGGCACCATCGTaGTCTCACACCCACACACAC +
Preference number: 2 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDTQAPS*SHTHTH
Trigger: GTGTGTGTGGGTGTGAGAGCACGATGGTGCCTGTGT...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAACCACATGAACACAGCTaGGTACAAGGCATGCCTGTC +
Preference number: 2 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREPHEHS*VQGMPV
Trigger: GACAGGCATGCCTTGTACTCAGCTGTGTTCATGTGG...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTTCTTACTGAGGTaGATGGAAGCAAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQHFLLR*MEARLL
Trigger: CAGCAGTCTTGCTTCCATGCACCTCAGTAAGAAGTG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp GGGGCTGAGTGCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTaGGTTGATCTGCAAAGAGGCCACCGCTTCTCCTCAGGGGAACAG +
Preference number: 2 (lower is better)
Translates to: GAECQIRNSTFNQIK*VDLQRGHRFSSGEQ
Trigger: CTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGCACTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGATGTGCCCTGGGAACTaGGCAGCTGAGTTAAAATAT +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQMCPGN*AAELKY
Trigger: ATATTTTAACTCAGCTGCTCAGTTCCCAGGGCACAT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATGGGCCGAATCCTCTCTaGAGCTTTTTGCTAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDGPNPL*SFLLVS
Trigger: AGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCC...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAGGATGTTCAGAGTATaGGTGCATGGGAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQRMFRV*VHGKRW
Trigger: CCATCTTTTCCCATGCACGCATACTCTGAACATCCT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCTGTCCCCTCAGGCTTaGCTCATGGACTCAGACACC +
Preference number: 2 (lower is better)
Translates to: STFSEGGLVRVRQEKQRALSPQA*LMDSDT
Trigger: GGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp CAGGGGAACAGTTCTGAGTTTGGGCCGAATCCTCTCTGCAGCTTTTaGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: QGNSSEFGPNPLCSF*LVSSLRRQMLFPPW
Trigger: CCAGGGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCCTCTTGCTTTCCACTTaGACTATCGCACTTTACCTT +
Preference number: 2 (lower is better)
Translates to: LALLAAAGMKALRRLRTFLLLST*TIALYL
Trigger: AAGGTAAAGTGCGATAGTTCAAGTGGAAAGCAAGAG...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATGGAAGCAAGACTGCTaGTGGTGCCCACCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRWKQDC*WCPPGA
Trigger: GGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCCA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGAGTCGCCACCTTCCTaGGGCACCGTGCCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNESPPS*GTVPAR
Trigger: CCTTGCTGGCACGGTGCCTCAGGAAGGTGGCGACTC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTTAAGTTGGTTGATCTaGAAAGAGGCCACCGCTTCT +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGLSWLI*KEATAS
Trigger: AGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTGTTCAGAGTATGCGTaGATGGGAAAAGATGGTGAC +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGCSEYA*MGKDGD
Trigger: GTCACCATCTTTTCCCATGCACGCATACTCTGAACA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGTCTTCCCTGCCCACTaGACTGAGTCTCATGTCTCC +
Preference number: 2 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAVFPAH*TESHVS
Trigger: GGAGACATGAGACTCAGTGCAGTGGGCAGGGAAGAC...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTGAGTACAAGGCATaGCTGTCAACTTGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTAEYKA*LSTCLS
Trigger: AGACAGACAAGTTGACAGGCATGCCTTGTACTCAGC...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGACATATTTGGCTCAATaGAGAACCCAAAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQTYLAQ*RTQNSS
Trigger: GCTGCTGTTTTGGGTTCTGCATTGAGCCAAATATGT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCTCAACCAGATTAAGTTaGTTGATCTGCAAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LALLAAAGMKALRRLRTFSTRLS*LICKEA
Trigger: GGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGA...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGCATGGTGTATGGACATaGCACCAGCTTACAGACTTA +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGHGVWT*HQLTDL
Trigger: TAAGTCTGTAAGCTGGTGCCATGTCCATACACCATG...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAGCACTCTGGCGCCCTTaGTCATGGAGGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRALWRP*SWRCGW
Trigger: CCACCCACACCTCCATGACCAAGGGCGCCAGAGTGC...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTCCAGTTGCAGCACTCTaGCGCCCTTGGTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSPVAAL*RPWSWR
Trigger: CCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGG...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp CTGAGTGCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTTGGTaGATCTGCAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGTTCT +
Preference number: 2 (lower is better)
Translates to: LSARLGTARSTRLSW*ICKEATASPQGNSS
Trigger: AGAACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGCACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATACAGACTTAGGTCTTTaGCAGGATGGTCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDTDLGL*QDGHGF
Trigger: AAAACCATGACCATCCTGTCAAAGACCTAAGTCTGT...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTTATCGGATCCATTTTaGGAGAAGAAAAGCACCAGA +
Preference number: 2 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGLSDPF*EKKSTR
Trigger: TCTGGTGCTTTTCTTCTCTCAAAATGGATCCGATAA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCAGGCAGGATTCCTTTaGTTCCATCTGTTATGTCTT +
Preference number: 2 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTQAGFL*FHLLCL
Trigger: AAGACATAACAGATGGAAGCAAAGGAATCCTGCCTG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCTTCCTGAGGCACCGTaGCAGCAAGGTGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNLPEAP*QQGAPV
Trigger: CACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAACAGATCTCCATTTTaGAGAATGCTAAGACATTGC +
Preference number: 2 (lower is better)
Translates to: DLSESDRKSRERPTPQLQNRSPF*RMLRHC
Trigger: GCAATGTCTTAGCATTCTGCAAAATGGAGATCTGTT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGGCTTTGCTAGCTGCTaGCGGCATGAAGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNGFASC*RHEGPQ
Trigger: CTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCAGAGTATGCGTGCATaGGAAAAGATGGTGACAAAT +
Preference number: 2 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDQSMRA*EKMVTN
Trigger: ATTTGTCACCATCTTTTCCCATGCACGCATACTCTG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCCAGTGTGGCAGACCTaGAGACTCACTGTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLPVWQT*RLTVPS
Trigger: TGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTTGCCCACCTGGGGCCTaGATCCAAATGCGATTTCTC +
Preference number: 2 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLCPPGA*IQMRFL
Trigger: GAGAAATCGCATTTGGATCCAGGCCCCAGGTGGGCA...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATCTGGATGCAGAGGATaGGCCCACACAAGGATGTTC +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRSGCRG*AHTRMF
Trigger: GAACATCCTTGTGTGGGCCCATCCTCTGCATCCAGA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTGCAGCATGCAGGCATTaGACGGGAAATAATCCAGCG +
Preference number: 2 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSAACRH*TGNNPA
Trigger: CGCTGGATTATTTCCCGTCCAATGCCTGCATGCTGC...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp CTCCAAAGATGTGGTCCTGCTAAGGTGACTCCTGATTCTGCCCTATaGTTCAACAAGAAGGGAGCCCCATGTAAAGAACAGGCTAGAAAA +
Preference number: 2 (lower is better)
Translates to: LQRCGPAKVTPDSAL*FNKKGAPCKEQARK
Trigger: TTTTCTAGCCTGTTCTTTACATGGGGCTCCCTTCTTGTTGAACAATAGGGCAGAATCAGGAGTCACCTTAGCAGGACCACATCTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATAATATGAGGGAAGGCTaGAAAGGGCCCTGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNNMREG*KGPWVQ
Trigger: CTGAACCCAGGGCCCTTTTCAGCCTTCCCTCATATT...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCTAGGACTAGAGGCATaGACCACCACACCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNLGLEA*TTTPGK
Trigger: TTTGCCTGGTGTGGTGGTGCATGCCTCTAGTCCTAG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATACTCAGACACCCACATaGGAATGCTTCCAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNTQTPT*ECFQPG
Trigger: TCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGT...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTAGATCCACTTCTTACTaGGGTGCATGGAAGCAAGAC +
Preference number: 2 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSRSTSY*GAWKQD
Trigger: GTCTTGCTTCCATGCACCTCAGTAAGAAGTGGATCT...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTGGGCCTGGATCCAAATaGGATTTCTCATTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLGPGSK*DFSFLP
Trigger: AGGGAGAAATGAGAAATCGCATTTGGATCCAGGCCC...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTTCACCCAGGCTGGAATaGAGTAGTGTTATCTCGACT +
Preference number: 2 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSSPRLE*SSVIST
Trigger: AGTCGAGATAACACTACTGCATTCCAGCCTGGGTGA...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAGGGTCTATTGGGGGTTaGATACACAGTCTCAAACTC +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRGSIGG*IHSLKL
Trigger: GAGTTTGAGACTGTGTATGCAACCCCCAATAGACCC...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAACCCGGCCGGTTATCTaGAGTTTTCAATTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRTRPVI*SFQFSD
Trigger: ATCTGAGAATTGAAAACTGCAGATAACCGGCCGGGT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 90 bp AGAACTGATATCCATGTTAACAGGGAATCGACACTTCTCAGAAACTaGGCAACGATTCTACATTCAGTGAGGGAGGACTTGTCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: RTDIHVNRESTLLRN*ATILHSVREDLSES
Trigger: TGACTCTGACAAGTCCTCCCTCACTGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTGTCGATTCCCTGTTAACATGGATATCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAAAGGAGATAAGCCGCTaGACAACAGATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: TSSGKCEAELISMLTGNRKEISR*TTDLHF
Trigger: AAAATGGAGATCTGTTGTCCAGCGGCTTATCTCCTT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR GCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGCACTGGTCATTCTCTTaGTTTCCACTTGAACTATCG +
Preference number: 2 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQHWSFS*FPLELS
Trigger: CGATAGTTCAAGTGGAAAGCAAGAGAATGACCAGTG...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATAATTGGGCAAGTTCTTaGTCTCTGTCTCTCTTACAG +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNNWASS*SLSLLQ
Trigger: CTGTAAGAGAGACAGAGACCAAGAACTTGCCCAATT...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGAGAGACATGTGACTTaGAAATATGAAGCCAGATAC +
Preference number: 2 (lower is better)
Translates to: STSSGKCEAELISMLTGNERHVT*KYEARY
Trigger: GTATCTGGCTTCATATTTTCAAGTCACATGTCTCTC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR TCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGGGATGGTCATGGTTTTaGGGTTTTAAAGAAGCTATT +
Preference number: 2 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQGWSWF*GFKEAI
Trigger: AATAGCTTCTTTAAAACCTCAAAACCATGACCATCC...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp GCGGCCCACGCCCCAGTTGCAGCACTCTGGCGCCCTTaGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGC +
Preference number: 3 (lower is better)
Translates to: AAHAPVAALWRP*SWRCGWSNSSS
Trigger: GCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp AAGGCCCACCTGAGTCGCCACCTTCCTGAGGCACCGTaGCAGCAAGGTGCACCAGTGTGGCAGACCTGGAGA +
Preference number: 3 (lower is better)
Translates to: KAHLSRHLPEAP*QQGAPVWQTWR
Trigger: TCTCCAGGTCTGCCACACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAGGTGGCGACTCAGGTGGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp CAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTaGAGCACTCTGGCGCCCTTGGTCATGGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: QTGKAESGPRPS*STLAPLVMEVW
Trigger: CCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp AAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTCTaGCGCCCTTGGTCATGGAGGTGTGGGTGGAGCAAT +
Preference number: 3 (lower is better)
Translates to: KQRAAHAPVAAL*RPWSWRCGWSN
Trigger: ATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp GCACCGTGCCAGCAAGGTGCACCAGTGTGGCAGACCTaGAGACTCACTGTCCCCTCAGGCTTGGCTCATGGA +
Preference number: 3 (lower is better)
Translates to: APCQQGAPVWQT*RLTVPSGLAHG
Trigger: TCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCACCTTGCTGGCACGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp CTTCCTGAGGCACCGTGCCAGCAAGGTGCACCAGTGTaGCAGACCTGGAGACTCACTGTCCCCTCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: LPEAPCQQGAPV*QTWRLTVPSGL
Trigger: CAAGCCTGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp GCAGCACTCTGGCGCCCTTGGTCATGGAGGTGTGGGTaGAGCAATTCAAGCAGCATGCAGGCATTGGACGGG +
Preference number: 3 (lower is better)
Translates to: AALWRPWSWRCG*SNSSSMQALDG
Trigger: CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp GACCTGGAGACTCACTGTCCCCTCAGGCTTGGCTCATaGACTCAGACACCCACATGGGAATGCTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: DLETHCPLRLGS*TQTPTWECFQP
Trigger: AGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGTGAGTCTCCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp CAGGCCCACTGCAGAGCATGCTCTGGATGCAGAGGATaGGCCCACACAAGGATGTTCAGAGTATGCGTGCAT +
Preference number: 3 (lower is better)
Translates to: QAHCRACSGCRG*AHTRMFRVCVH
Trigger: ATGCACGCATACTCTGAACATCCTTGTGTGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAGTGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp AGTTGCAGCACTCTGGCGCCCTTGGTCATGGAGGTGTaGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGA +
Preference number: 3 (lower is better)
Translates to: SCSTLAPLVMEV*VEQFKQHAGIG
Trigger: TCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAGCACCAGAGACTGCTaGGAAAGGGACAGCTTCATT +
Preference number: 3 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSTRDC*ERDSFI
Trigger: AATGAAGCTGTCCCTTTCCAAGCAGTCTCTGGTGCT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCAGTCCCTCAGTGGGCTaGGTAGGTCCTCTACATATT +
Preference number: 3 (lower is better)
Translates to: LALLAAAGMKALRRLRTFSPSVG*VGPLHI
Trigger: AATATGTAGAGGACCTACCAAGCCCACTGAGGGACT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp CAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGTTCTaGGTTTGGGCCGAATCCTCTCTGCAGCTTTTTGCT +
Preference number: 3 (lower is better)
Translates to: QRGHRFSSGEQF*VWAESSLQLFA
Trigger: AGCAAAAAGCTGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp AGGTGCATGGAAGCAAGACTGCTGATGGTGCCCACCTaGGGCCTGGATCCAAATGCGATTTCTCATTTCTCC +
Preference number: 3 (lower is better)
Translates to: RCMEARLLMVPT*GLDPNAISHFS
Trigger: GGAGAAATGAGAAATCGCATTTGGATCCAGGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCCATGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp CCCCTCAGGCTTGGCTCATGGACTCAGACACCCACATaGGAATGCTTCCAGCCTGGATTAGTCATTCAATGG +
Preference number: 3 (lower is better)
Translates to: PLRLGSWTQTPT*ECFQPGLVIQW
Trigger: CCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp AGGCTTGGCTCATGGACTCAGACACCCACATGGGAATaGTTCCAGCCTGGATTAGTCATTCAATGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: RLGSWTQTPTWE*FQPGLVIQWAF
Trigger: GAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp ATCCTGTTAGACTTGCTTTCTGGCTTTGCTAGCTGCTaGCGGCATGAAGGCCCTCAGACGGCTCAGAACATT +
Preference number: 3 (lower is better)
Translates to: ILLDLLSGFASC*RHEGPQTAQNI
Trigger: AATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAACAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp GGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATaGAGGCATTGGACGGGAAATAATCCAGCGTTAGGT +
Preference number: 3 (lower is better)
Translates to: GHGGVGGAIQAA*RHWTGNNPALG
Trigger: ACCTAACGCTGGATTATTTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTCTCTTGCTTTCCACTaGAACTATCGCACTTTACCT +
Preference number: 3 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSLAFH*NYRTLP
Trigger: AGGTAAAGTGCGATAGTTCAAGTGGAAAGCAAGAGA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCATTCTGAACTCTCCTTaGAGCCTATTCAATCACACA +
Preference number: 3 (lower is better)
Translates to: LALLAAAGMKALRRLRTFILNSP*SLFNHT
Trigger: TGTGTGATTGAATAGGCTCAAAGGAGAGTTCAGAAT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp GGAACAGCACGTTCAACCAGATTAAGTTGGTTGATCTaGAAAGAGGCCACCGCTTCTCCTCAGGGGAACAGT +
Preference number: 3 (lower is better)
Translates to: GTARSTRLSWLI*KEATASPQGNS
Trigger: ACTGTTCCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp TCCTTTGCTTCCATCTGTTATGTCTTCCCTGCCCACTaGACTGAGTCTCATGTCTCCATCTCTGCATCTGCC +
Preference number: 3 (lower is better)
Translates to: SFASICYVFPAH*TESHVSISASA
Trigger: GGCAGATGCAGAGATGGAGACATGAGACTCAGTGCAGTGGGCAGGGAAGACATAACAGATGGAAGCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp CCCATGGGTTCTGATCCAGAAATGTGCCCTGGGAACTaGGCAGCTGAGTTAAAATATAACTCAAGGCCCACC +
Preference number: 3 (lower is better)
Translates to: PMGSDPEMCPGN*AAELKYNSRPT
Trigger: GGTGGGCCTTGAGTTATATTTTAACTCAGCTGCTCAGTTCCCAGGGCACATTTCTGGATCAGAACCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp CAGGGGAACAGTTCTGAGTTTGGGCCGAATCCTCTCTaGAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: QGNSSEFGPNPL*SFLLVSSLRRQ
Trigger: TTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp GCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTTaGTTGATCTGCAAAGAGGCCACCGCTTCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: ARLGTARSTRLS*LICKEATASPQ
Trigger: CTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGATTCAACCAGATTAAGTaGGTTGATCTGCAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRFNQIK*VDLQRG
Trigger: GCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAA...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCTATTGCTCCCAACATaGAATCATTCAGAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDLLLPT*NHSEAE
Trigger: TTCTGCTTCTGAATGATTCAATGTTGGGAGCAATAG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAGTGTATTTCTAAAATaGGGCAAGTTCTTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGSVFLK*GKFLVS
Trigger: AGAGACCAAGAACTTGCCCAATTTTAGAAATACACT...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATACTGTCCCCTCAGGCTaGGCTCATGGACTCAGACAC +
Preference number: 3 (lower is better)
Translates to: STSSGKCEAELISMLTGNTVPSG*AHGLRH
Trigger: GTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGT...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGGAACAGTTCTGAGTTaGGGCCGAATCCTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: STSSGKCEAELISMLTGNGTVLS*GRILSA
Trigger: TGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGACCTGATTCTGCCCTATaGTTCAACAAGAAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: TSSGKCEAELISMLTGNRPDSAL*FNKKGA
Trigger: GGCTCCCTTCTTGTTGAACAATAGGGCAGAATCAGG...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCAGAATGCTAAGACATaGCACTTAGTACCTCCTGTT +
Preference number: 3 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAQNAKT*HLVPPV
Trigger: AACAGGAGGTACTAAGTGCAATGTCTTAGCATTCTG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp TTGTCTCCAGTACGCCTCAACCTCAAGTGGGAAATGTaGGGCAGAACTGATATCCATGTTAACAGGGAATCG +
Preference number: 3 (lower is better)
Translates to: LSPVRLNLKWEM*GRTDIHVNRES
Trigger: CGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGAGGCGTACTGGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp ATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTaGATTAGTCATTCAATGGGCCTTCAATACAGACAA +
Preference number: 3 (lower is better)
Translates to: MDSDTHMGMLPA*ISHSMGLQYRQ
Trigger: TTGTCTGTATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTACCAGATTAAGTTGGTaGATCTGCAAAGAGGCCACC +
Preference number: 3 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSTRLSW*ICKEAT
Trigger: GGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGT...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp TTCTTTTCTTTCCACAGACCACCACATGAACACAGCTaGGTACAAGGCATGCCTGTCAACTTGTCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: FFSFHRPPHEHS*VQGMPVNLSVF
Trigger: GAAGACAGACAAGTTGACAGGCATGCCTTGTACTCAGCTGTGTTCATGTGGTGGTCTGTGGAAAGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp GCCTTGGGTTCTGAATCCAGGGGTCTGAGAGACATGTaGCTTGAAAATATGAAGCCAGATACATTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: ALGSESRGLRDM*LENMKPDTFSR
Trigger: TCTGGAGAATGTATCTGGCTTCATATTTTCAAGTCACATGTCTCTCAGACCCCTGGATTCAGAACCCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp CACTTCTCAGAAACTTGGCAACGATTCTACATTCAGTaGGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCA +
Preference number: 3 (lower is better)
Translates to: HFSETWQRFYIQ*GRTCQSQTGKA
Trigger: TGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp ACATGGGAATGCTTCCAGCCTGGATTAGTCATTCAATaGGCCTTCAATACAGACAAAAGGCAACAACTGCAC +
Preference number: 3 (lower is better)
Translates to: TWECFQPGLVIQ*AFNTDKRQQLH
Trigger: GTGCAGTTGTTGCCTTTTGTCTGTATTGAAGGCCCATTGAATGACTAATCCAGGCTGGAAGCATTCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATCCTCTCTGCAGCTTTTaGCTAGTCTCTTCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNPLCSF*LVSSLR
Trigger: TCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGAGG...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTCTTCATGCCTATGATTaGTGGCCTTGGGTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSLHAYD*WPWVLN
Trigger: ATTCAGAACCCAAGGCCACAAATCATAGGCATGAAG...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR TCA 72 bp CAAATGAGTCTTCTTTTCTTTCCACAGACCACCACATaGACACAGCTGAGTACAAGGCATGCCTGTCAACTT +
Preference number: 3 (lower is better)
Translates to: QMSLLFFPQTTT*TQLSTRHACQL
Trigger: AAGTTGACAGGCATGCCTTGTACTCAGCTGTGTTCATGTGGTGGTCTGTGGAAAGAAAAGAAGACTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAACCCACCTTAGCGTTTaGTTCTTATTCAAACAGGCA +
Preference number: 3 (lower is better)
Translates to: TSSGKCEAELISMLTGNRTHLSV*FLFKQA
Trigger: TGCCTGTTTGAATAAGAACAAAACGCTAAGGTGGGT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATaGAACAAAACGGGGAATTCAGAAGTGCCACAATAC +
Preference number: 3 (lower is better)
Translates to: ICLATLLLSIPI*NKTGNSEVPQY
Trigger: GTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATTACAGACTTAGGTCTTaGACAGGATGGTCATGGTTT +
Preference number: 3 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNYRLRS*TGWSWF
Trigger: AAACCATGACCATCCTGTCAAAGACCTAAGTCTGTA...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTGAATTCAGATTAGCTTaGAGGAAATGTGGTGTGAGA +
Preference number: 3 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLEFRLA*RKCGVR
Trigger: TCTCACACCACATTTCCTCAAAGCTAATCTGAATTC...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp CTCTTAGAAAAGTTCTATGTGTCACTTAACCACCCTTaGTCAGAAGAGTCACCTCGAGATACCAGTATTAAT +
Preference number: 3 (lower is better)
Translates to: LLEKFYVSLNHP*SEESPRDTSIN
Trigger: ATTAATACTGGTATCTCGAGGTGACTCTTCTGACCAAGGGTGGTTAAGTGACACATAGAACTTTTCTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR GCA 72 bp AGCAGCTTTCTGGTGACAGCACGACATTCTACAATCTaGTCTATTCAAATATTTATCGGATCCATTTTGAGA +
Preference number: 3 (lower is better)
Translates to: SSFLVTARHSTI*SIQIFIGSILR
Trigger: TCTCAAAATGGATCCGATAAATATTTGAATAGAGCAGATTGTAGAATGTCGTGCTGTCACCAGAAAGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CCA 72 bp ATATCAATTGTAAAACTTAGAGCCCCAAGTATTGATTaGCGTATTCTTTGTCTAAAGGTAGCCAAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: ISIVKLRAPSID*RILCLKVAKEK
Trigger: CTTCTCTTTGGCTACCTTTAGACAAAGAATACGCCAATCAATACTTGGGGCTCTAAGTTTTACAATTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp AGCGGCCCACGCCCCAGTTGCAGCACTCTGGCGCCCTaGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGPRPSCSTLAP*VMEVWVEQFKQ
Trigger: CTGCTTGAATTGCTCCACCCACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGGCCCACGCCCCAGTTaGAGCACTCTGGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQGPRPS*STLAPL
Trigger: CAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp TCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTaGCAGCACTCTGGCGCCCTTGGTCATGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SDRKSRERPTPQ*QHSGALGHGGV
Trigger: CACACCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAGAGTCGCCACCTTCCTaGGGCACCGTGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREESPPS*GTVPAR
Trigger: CCTTGCTGGCACGGTGCCTCAGGAAGGTGGCGACTC...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAATGGAAGCAAGACTGCTaGTGGTGCCCACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREWKQDC*WCPPGA
Trigger: GGCCCCAGGTGGGCACCATCAGCAGTCTTGCTTCCA...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTGGCCAGGCTGGTCTTaGAGTCCTAACCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQWPGWS*SPNLRW
Trigger: CCACCTGAGGTTAGGACTTCAAGACCAGCCTGGCCA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCTTGTGCGCCGGTCTTaGCTTGCCGTTCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDLVRRS*LAVRCQ
Trigger: CTGGCAGCGAACGGCAAGCCAAGACCGGCGCACAAG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCTCTGGTGGTCCGGCTaGGCATGTCCAGCTCTAACA +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQLWWSG*ACPALT
Trigger: TGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCCTGTCCCCTCAGGCTTaGCTCATGGACTCAGACACC +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFLSPQA*LMDSDT
Trigger: GGTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAG...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCTTCCTGAGGCACCGTaGCAGCAAGGTGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTLPEAP*QQGAPV
Trigger: CACTGGTGCACCTTGCTGGCACGGTGCCTCAGGAAG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGGCTTTGCTAGCTGCTaGCGGCATGAAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTGFASC*RHEGPQ
Trigger: CTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCC...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCCACTGCCTCCTGCCTaGCCCAGGATCACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDPLPPA*PRITPF
Trigger: GAAAGGAGTGATCCTGGGGCAGGCAGGAGGCAGTGG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCGACCGTTTTTCCAGCTaGGCCTTGAGCCGAGCAATC +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFDRFSS*ALSRAI
Trigger: GATTGCTCGGCTCAAGGCCCAGCTGGAAAAACGGTC...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAACCAGTTGCAGCACTCTaGCGCCCTTGGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREPVAAL*RPWSWR
Trigger: CCTCCATGACCAAGGGCGCCAGAGTGCTGCAACTGG...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCAAAATGTCTCAGGATaGTACGGTCCTGAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQQNVSG*YGPEAR
Trigger: TCGGGCCTCAGGACCGTAGCATCCTGAGACATTTTG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCACAAAACAGGCCCACTaGAGAGCATGCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFTKQAH*RACSGC
Trigger: GCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGGACCTTGGGGGCAATaGCTGGACCCTCATAGTCTC +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTGPWGQ*LDPHSL
Trigger: GAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCC...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGATCTCAGCCTTCACTaGCTGAAGCTTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQDLSLH*LKLGEE
Trigger: CTCTTCTCCAAGCTTCAGGCAGTGAAGGCTGAGATC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTTTCCTTGCCATTCATaGGCCGACAGCGAACCACCA +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGFPCHS*ADSEPP
Trigger: TGGTGGTTCGCTGTCGGCCCATGAATGGCAAGGAAA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCGAGCAATCTCTTCCTaGAATTCTCGAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQRAISS*NSRRRA
Trigger: TGCCCTCCTTCGAGAATTCCAGGAAGAGATTGCTCG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCAGCCCCCGAGACTGTaGATAAAGCTGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTQPPRL*IKLRCR
Trigger: CCTGCATCTCAGCTTTATCCACAGTCTCGGGGGCTG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAATGCTGTTTCCGCCCTaGGAGAGGAGAAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREMLFPP*ERRSWL
Trigger: AAGCCAGCTTCTCCTCTCCCAGGGCGGAAACAGCAT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCACTCTGGCGCCCTTaGTCATGGAGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAALWRP*SWRCGW
Trigger: CCACCCACACCTCCATGACCAAGGGCGCCAGAGTGC...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGATCTGCAACCAAGCTGTaGTCCTCTACAATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRSATKL*SSTMAR
Trigger: GCGGGCCATTGTAGAGGATCACAGCTTGGTTGCAGA...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCTTATATCCCACGGCTaGGACTGGCCGCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDLISHG*DWPLHH
Trigger: ATGATGAAGCGGCCAGTCTCAGCCGTGGGATATAAG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCAGATCCACTTCTTACTaGGGTGCATGGAAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFRSTSY*GAWKQD
Trigger: GTCTTGCTTCCATGCACCTCAGTAAGAAGTGGATCT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCCACATGAACACAGCTaGGTACAAGGCATGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDPHEHS*VQGMPV
Trigger: GACAGGCATGCCTTGTACTCAGCTGTGTTCATGTGG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGATGTGGCCTTGGGTTCTaGATCCAGGGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRCGLGF*IQGSER
Trigger: TCTCTCAGACCCCTGGATTCAGAACCCAAGGCCACA...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGATCTCATCTTCATCCTaGAGAGCCGCATCCAATGCA +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQISSSS*RAASNA
Trigger: TGCATTGGATGCGGCTCTGCAGGATGAAGATGAGAT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAACTAGGACTAGAGGCATaGACCACCACACCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRELGLEA*TTTPGK
Trigger: TTTGCCTGGTGTGGTGGTGCATGCCTCTAGTCCTAG...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGGGTCTATTGGGGGTTaGATACACAGTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQGSIGG*IHSLKL
Trigger: GAGTTTGAGACTGTGTATGCAACCCCCAATAGACCC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGACATGGGCCGTCCCTTTaGGGTTCTTCACAGACACCT +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRHGPSL*GSSQTP
Trigger: AGGTGTCTGTGAAGAACCCCAAAGGGACGGCCCATG...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTTTCCTACACGGATGTaGTTTTCACCATCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGFPTRM*FSPSRP
Trigger: GGGCCTCGATGGTGAAAACCACATCCGTGTAGGAAA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCTGGCATATCGCAGAGTaGTCAGAGTCTCTTCTACGT +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFWHIAE*SESLLR
Trigger: ACGTAGAAGAGACTCTGACCACTCTGCGATATGCCA...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAGTTTCCCATGGGTTCTaGTCCAGAAATGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRVSHGF*SRNVPW
Trigger: CCAGGGCACATTTCTGGATCAGAACCCATGGGAAAC...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCGATATGGAATGTGAGTaGTTTTGCCGTCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFDMECE*FCRPLE
Trigger: CTCTAGTGGACGGCAAAAGCACTCACATTCCATATC...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCATGTCCACCTCTTGCTaGAATGAGCTGTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFMSTSC*NELYVS
Trigger: AGAGACATACAGCTCATTGCAGCAAGAGGTGGACAT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATACACCCACATGGGAATaGTTCCAGCCTGGATTAGTC +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDTPTWE*FQPGLV
Trigger: GACTAATCCAGGCTGGAAGCATTCCCATGTGGGTGT...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGGCTGAGTACAAGGCATaGCTGTCAACTTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGAEYKA*LSTCLS
Trigger: AGACAGACAAGTTGACAGGCATGCCTTGTACTCAGC...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTCTGGCTTTGCTAGCTaGTGCCGGCATGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRASGFAS*CRHEGP
Trigger: AGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGGCAATTCAAGCAGCATaGAGGCATTGGACGGGAAAT +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGAIQAA*RHWTGN
Trigger: ATTTCCCGTCCAATGCCTGCATGCTGCTTGAATTGC...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGCACGGATTCCTTCCATaGTGTAGGTTTTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGHGFLP*CRFFLS
Trigger: GGACAGGAAAAACCTACACCATGGAAGGAATCCGTG...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAATCTTCCTCCTACCAATaGACCGTTTTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRESSSYQ*TVFPAG
Trigger: CCCAGCTGGAAAAACGGTCCATTGGTAGGAGGAAGA...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTGTGATCCTCTACAATaGCCCGCTTCTCAATCTCCA +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGCDPLQ*PASQSP
Trigger: TGGAGATTGAGAAGCGGGCCATTGTAGAGGATCACA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCTGGACGAATCATCATaGACATTCTTGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTLDESS*TFLRAG
Trigger: GCCAGCACGCAAGAATGTCCATGATGATTCGTCCAG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAATCATGGAGGTGTGGGTaGAGCAATTCAAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRESWRCG*SNSSSM
Trigger: CATGCTGCTTGAATTGCTCCACCCACACCTCCATGA...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCATCGAGAGATGTGGGTaGAGATATGGTCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFIERCG*RYGQMS
Trigger: ACTCATTTGACCATATCTTCACCCACATCTCTCGAT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAGAGCCTGGTAAGCTTTaGGTCCCGATATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCREPGKL*VPIWNV
Trigger: CACATTCCATATCGGGACTCAAAGCTTACCAGGCTC...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCCCTGCCCACTGCACTaGGTCTCATGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAPCPLH*VSCLHL
Trigger: GAGATGGAGACATGAGACTCAGTGCAGTGGGCAGGG...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAACAGCAGCTTTCTGGTaGCAGCACGACATTCTACAA +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRETAAFW*QHDILQ
Trigger: TTGTAGAATGTCGTGCTGTCACCAGAAAGCTGCTGT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGCTGAATCCAGGGGTCTaGGAGACATGTGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTLNPGV*ETCDLK
Trigger: TTTCAAGTCACATGTCTCTCAGACCCCTGGATTCAG...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAAGTGCTTCATGCCTATaGTTTGTGGCCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRESASCL*FVALGS
Trigger: AGAACCCAAGGCCACAAATCATAGGCATGAAGCACT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTTCAGCCATTCCCCGCTaGCCCGGATGGGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSSAIPR*PGWGET
Trigger: TGTCTCTCCCCATCCGGGGCAGCGGGGAATGGCTGA...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAGTGATAACGAAAATTaGATGAGAACGCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSDNEN*MRTRAV
Trigger: CACAGCTCGCGTTCTCATGCAATTTTCGTTATCACT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTGCGCCGGTCTTGGCTTaGCGTTCGCTGCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSAPVLA*RSLPAR
Trigger: TCTTGCTGGCAGCGAACGGCAAGCCAAGACCGGCGC...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCATTTCCTGTCGTTTCTaGTCCAGGATTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LALLAAAGMKALRRLRTFISCRF*SRIFCC
Trigger: ACAGCAGAAAATCCTGGAGCAGAAACGACAGGAAAT...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCATCATGGACATTCTTaGGTGCTGGCTCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDHHGHS*VLAQWS
Trigger: AGACCATTGAGCCAGCACGCAAGAATGTCCATGATG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCACTGGTCATTCTCTTaGTTTCCACTTGAACTATCG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQHWSFS*FPLELS
Trigger: CGATAGTTCAAGTGGAAAGCAAGAGAATGACCAGTG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTCATGTCTCCATCTCTaGATCTGCCTAGCTACTCTT +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGSCLHL*ICLATL
Trigger: AAGAGTAGCTAGGCAGATGCAGAGATGGAGACATGA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGTCTTGGGCATTTCATaGGCCGTCCCTTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAVLGIS*AVPLGF
Trigger: GAACCCCAAAGGGACGGCCCATGAAATGCCCAAGAC...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGCAGAGTATGCGTGCATaGGAAAAGATGGTGACAAAT +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQQSMRA*EKMVTN
Trigger: ATTTGTCACCATCTTTTCCCATGCACGCATACTCTG...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAATTGGGCAAGTTCTTaGTCTCTGTCTCTCTTACAG +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQNWASS*SLSLLQ
Trigger: CTGTAAGAGAGACAGAGACCAAGAACTTGCCCAATT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATTCACTTAACCACCCTTaGTCAGAAGAGTCACCTCGA +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDSLNHP*SEESPR
Trigger: TCGAGGTGACTCTTCTGACCAAGGGTGGTTAAGTGA...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGATTGGTCATGGAGGTGTaGGTGGAGCAATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRLVMEV*VEQFKQ
Trigger: CTGCTTGAATTGCTCCACCCACACCTCCATGACCAA...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCACCTCTTGCTGCAATaGGCTGTATGTCTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDHLLLQ*AVCLFK
Trigger: CTTAAAGAGACATACAGCTCATTGCAGCAAGAGGTG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGACAGACTTAGGTCTTTaGCAGGATGGTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGTDLGL*QDGHGF
Trigger: AAAACCATGACCATCCTGTCAAAGACCTAAGTCTGT...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAAGGTGACAGATTTCTaGACAGTACAAAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQKVTDF*TVQNKA
Trigger: GGCTTTGTTTTGTACTGTTCAGAAATCTGTCACCTT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAACTTTCTCGACGTTTCTaGTCTGCAATTTCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRELSRRF*SAISCR
Trigger: ACGACAGGAAATTGCAGAGCAGAAACGTCGAGAAAG...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGGCCGCTTCATCATCTaGTGGTTCTCCAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAGRFII*WFSSLV
Trigger: AACCAGACTGGAGAACCAGCAGATGATGAAGCGGCC...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATCAGAGCCGCATCCAATaGAGCCTGGACCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNQSRIQ*SLDLGG
Trigger: GCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTG...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAGGGCCTGGATCCAAATaGGATTTCTCATTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRGPGSK*DFSFLP
Trigger: AGGGAGAAATGAGAAATCGCATTTGGATCCAGGCCC...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAAAAAGCACCAGAGACTaGTTGGAAAGGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRKSTRD*LERDSF
Trigger: GAAGCTGTCCCTTTCCAAGCAGTCTCTGGTGCTTTT...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGTTGATGTGTTCTTCTTaGAGGTCATGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTLMCSS*RSWISA
Trigger: GGCTGAGATCCATGACCTCCAAGAAGAACACATCAA...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTGCGTGCTGGCTCAATaGTCTCTTATATCCCACGGC +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRACVLAQ*SLISHG
Trigger: GCCGTGGGATATAAGAGACCATTGAGCCAGCACGCA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGACCTATATCGGGCCTCTaGACGAATCATCATGGACAT +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRPISGL*TNHHGH
Trigger: ATGTCCATGATGATTCGTCCAGAGGCCCGATATAGG...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGGGTCCTCTACATATTTaGCTCAATGCAGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGGPLHI*LNAEPK
Trigger: TTTGGGTTCTGCATTGAGCCAAATATGTAGAGGACC...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCAGCATGCAGGCATTaGACGGGAAATAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAAACRH*TGNNPA
Trigger: CGCTGGATTATTTCCCGTCCAATGCCTGCATGCTGC...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp TTTCGTCCACTGATGGGGTTCAGATGGTCTGAGGTGTaGTCTCCAGTACGCCTCAACCTCAAGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: FRPLMGFRWSEV*SPVRLNLKWEM
Trigger: CATTTCCCACTTGAGGTTGAGGCGTACTGGAGACAACACCTCAGACCATCTGAACCCCATCAGTGGACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGTCAAGCCTTTTGGTCTaGTCCTTTGAGAGCAAATCT +
Preference number: 4 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTSSLLV*SFESKS
Trigger: AGATTTGCTCTCAAAGGATCAGACCAAAAGGCTTGA...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGAACTCAAGGCCCACCTaGGTCGCCACCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQNSRPT*VATFLR
Trigger: CCTCAGGAAGGTGGCGACTCAGGTGGGCCTTGAGTT...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCAATATGAGGGAAGGCTaGAAAGGGCCCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSANMREG*KGPWVQ
Trigger: CTGAACCCAGGGCCCTTTTCAGCCTTCCCTCATATT...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTAACTTCAAGGAGCCATaGAGCCCACTGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSNFKEP*SPLPPA
Trigger: GGCAGGAGGCAGTGGGCTTCATGGCTCCTTGAAGTT...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATAGGCAGGCCCCACGTTaGCCACCATCACAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNRQAPR*PPSQSW
Trigger: CCAAGACTGTGATGGTGGCCAACGTGGGGCCTGCCT...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAGACCCTCATAGTCTCTaGTGGTCCGGCTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTDPHSL*WSGWAC
Trigger: ACATGCCCAGCCGGACCACCAGAGACTATGAGGGTC...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATATGCAGCCTGGACCTTaGGGGCAATGGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNMQPGP*GQWLDP
Trigger: AGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCAT...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATCTGATGGTGCCCACCTaGGGCCTGGATCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNLMVPT*GLDPNA
Trigger: CGCATTTGGATCCAGGCCCCAGGTGGGCACCATCAG...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGACATGGTGTATGGACATaGCACCAGCTTACAGACTTA +
Preference number: 4 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRHGVWT*HQLTDL
Trigger: TAAGTCTGTAAGCTGGTGCCATGTCCATACACCATG...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACACTGCAGAGCATGCTCTaGATGCAGAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTLQSML*MQRMGP
Trigger: TGGGCCCATCCTCTGCATCCAGAGCATGCTCTGCAG...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp AGATTAGGAACAGCACGTTCAACCAGATTAAGTTGGTaGATCTGCAAAGAGGCCACCGCTTCTCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLGTARSTRLSW*ICKEATASPQG
Trigger: CCCCTGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCCACTAGAGCAGAGATaGCATTACCCAAAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAPLEQR*HYPKRK
Trigger: TTTCCGCTTTGGGTAATGTCATCTCTGCTCTAGTGG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATACTCTCCATGGCCTTaGTCTTGGCGCCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRYSPWP*SWRPAS
Trigger: AGATGCTGGGCGCCAAGATCAAGGCCATGGAGAGTA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCTCAGCCTTCACTGCCTaGAGCTTGGAGAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSASAFTA*SLEKSF
Trigger: AAAGCTCTTCTCCAAGCTTCAGGCAGTGAAGGCTGA...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAGGGGTTCAGATGGTCTaGGGTGTTGTCTCCAGTACG +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRGVQMV*GVVSST
Trigger: CGTACTGGAGACAACACCTCAGACCATCTGAACCCC...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCAGCACAATGTTTTCTaGCCTATATCGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAQHNVF*PISGLW
Trigger: CCAGAGGCCCGATATAGGGCAGAAAACATTGTGCTG...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCAGCATCTTAGGCTCTaGCTGGAGGGAGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLQHLRL*LEGATV
Trigger: AACTGTGGCTCCCTCCAGGCAGAGCCTAAGATGCTG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAACAGATCTCCATTTTaGAGAATGCTAAGACATTGC +
Preference number: 4 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGNRSPF*RMLRHC
Trigger: GCAATGTCTTAGCATTCTGCAAAATGGAGATCTGTT...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATTACAAAACAAAGCCTTaGGTGATAGACAATCACCAG +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDYKTKP*VIDNHQ
Trigger: CTGGTGATTGTCTATCACGCAAGGCTTTGTTTTGTA...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTGTTTTTGGCACGGTTaGCATATCGCAGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRACFWHG*HIAEWS
Trigger: TGACCACTCTGCGATATGCCAACCGTGCCAAAAACA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGTCCTCATTGACCCTTaGTTTGTTCTTAATGTTTTT +
Preference number: 4 (lower is better)
Translates to: DLSESDRKSRERPTPQLQVLIDP*FVLNVF
Trigger: AAAAACATTAAGAACAAACCAAGGGTCAATGAGGAC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGCCTCATAGTCTCTGGTaGTCCGGCTGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQPHSLW*SGWACP
Trigger: TGGACATGCCCAGCCGGACCACCAGAGACTATGAGG...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTCTCAGGCTTGGCTCATaGACTCAGACACCCACATGG +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSLRLGS*TQTPTW
Trigger: CCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGAG...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGCCAGTGTGGCAGACCTaGAGACTCACTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQPVWQT*RLTVPS
Trigger: TGAGGGGACAGTGAGTCTCCAGGTCTGCCACACTGG...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp TGCCAGATTAGGAACAGCACGTTCAACCAGATTAAGTaGGTTGATCTGCAAAGAGGCCACCGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CQIRNSTFNQIK*VDLQRGHRFSS
Trigger: TGAGGAGAAGCGGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAACGTGCTGTTCCTAATCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCTGGTGAGCTCATTCTaGGTCTGCTCTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLLVSSF*VCSSSW
Trigger: CCAAGAGCTAGAGCAGACTCAGAATGAGCTCACCAG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATCAGGGGAACAGTTCTaGGTTTGGGCCGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRSGEQF*VWAESS
Trigger: AGAGGATTCGGCCCAAACTCAGAACTGTTCCCCTGA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCTTCTTCACAGACACCTaGCCCAGCTTAACATCCACA +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAFFTDT*PSLTST
Trigger: TGTGGATGTTAAGCTGGGGCAGGTGTCTGTGAAGAA...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCCCACATTCATCACATaGTCTATCTCCTTCACACTC +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAPTFIT*SISFTL
Trigger: GAGTGTGAAGGAGATAGAGCATGTGATGAATGTGGG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACACTCTCAGAAGGCAAATaGTGTTTCCGCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTLSEGK*CFRPGR
Trigger: TCTCCCAGGGCGGAAACAGCATTTGCCTTCTGAGAG...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCACTTCTTACTGAGGTaGATGGAAGCAAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAHFLLR*MEARLL
Trigger: CAGCAGTCTTGCTTCCATGCACCTCAGTAAGAAGTG...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGTCTTCCCTGCCCACTaGACTGAGTCTCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNVFPAH*TESHVS
Trigger: GGAGACATGAGACTCAGTGCAGTGGGCAGGGAAGAC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGACACAGGCACCATCGTaGTCTCACACCCACACACAC +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQTQAPS*SHTHTH
Trigger: GTGTGTGTGGGTGTGAGAGCACGATGGTGCCTGTGT...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAAAGCTGGCTTTACTTTaGAACCAGCCCCCGAGACTG +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTKLALL*NQPPRL
Trigger: CAGTCTCGGGGGCTGGTTCCAAAGTAAAGCCAGCTT...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACATCTGGATGCAGAGGATaGGCCCACACAAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTSGCRG*AHTRMF
Trigger: GAACATCCTTGTGTGGGCCCATCCTCTGCATCCAGA...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCAAGGTGCACCAGTGTaGCAGACCTGGAGACTCACT +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNQGAPV*QTWRLT
Trigger: AGTGAGTCTCCAGGTCTGCCACACTGGTGCACCTTG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCATGCCTATGATTTGTaGCCTTGGGTTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRAHAYDL*PWVLNP
Trigger: TGGATTCAGAACCCAAGGCCACAAATCATAGGCATG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGAGCGAACCACCACCCTaGCTGACTCTGAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQSEPPP*LTLSFS
Trigger: TGAAAAGCTCAGAGTCAGTCAGGGTGGTGGTTCGCT...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTTCCCGATATGGAATGTaGGTGCTTTTGCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSSRYGM*VLLPST
Trigger: AGTGGACGGCAAAAGCACTCACATTCCATATCGGGA...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATGTTTCAGCTCCCTGGTaGGCTCATTCTGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNVSAPW*AHSESA
Trigger: AGCAGACTCAGAATGAGCTCACCAGGGAGCTGAAAC...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCTCTTGCTTTCCACTTaGACTATCGCACTTTACCTT +
Preference number: 4 (lower is better)
Translates to: STFSEGGLVRVRQEKQRALLLST*TIALYL
Trigger: AAGGTAAAGTGCGATAGTTCAAGTGGAAAGCAAGAG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGCCACAGACCACCACATaGACACAGCTGAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQPQTTT*TQLSTR
Trigger: CCTTGTACTCAGCTGTGTTCATGTGGTGGTCTGTGG...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAGGGCAGGCAGAAAGGTaGCAGATTTCTGAACAGTAC +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTGQAER*QISEQY
Trigger: GTACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCC...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATTGGCTTGCCGTTCGCTaGCAGCAAGATCTACAAGGT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNWLAVR*QQDLQG
Trigger: ACCTTGTAGATCTTGCTGGCAGCGAACGGCAAGCCA...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGACCTCATCTTCTCCTCTaGAACCAAGCTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRPHLLL*NQAVIL
Trigger: GAGGATCACAGCTTGGTTGCAGAGGAGAAGATGAGG...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCTTGATGTCCACCTCTTaGTGCAATGAGCTGTATGTC +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSALMSTS*CNELYV
Trigger: GACATACAGCTCATTGCAGCAAGAGGTGGACATCAA...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATTTTTCTATAATAAGATaGTTGAGTTTCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDFSIIR*LSFSSL
Trigger: CAGGGAGCTGAAACTCAAGCATCTTATTATAGAAAA...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAGGGCCGAATCCTCTCTaGAGCTTTTTGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRGPNPL*SFLLVS
Trigger: AGAGACTAGCAAAAAGCTGCAGAGAGGATTCGGCCC...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAACTTTACCTTACCCATaGATTTCTGAGATGCTAATT +
Preference number: 4 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRETLPYP*ISEMLI
Trigger: AATTAGCATCTCAGAAATGCATGGGTAAGGTAAAGT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAGTCTGCTCTAGCTCTTaGCGCTCCTTGATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRVCSSS*RSLMCS
Trigger: AGAACACATCAAGGAGCGCCAAGAGCTAGAGCAGAC...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATACTCAGACACCCACATaGGAATGCTTCCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNTQTPT*ECFQPG
Trigger: TCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGT...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCTGATGGGGTTCAGATaGTCTGAGGTGTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLLMGFR*SEVLSP
Trigger: TGGAGACAACACCTCAGACCATCTGAACCCCATCAG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGACTGACCAGGTATTGTTaGTTCTGGGATCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRLTRYC*FWDREM
Trigger: CATCTCTCGATCCCAGAATCAACAATACCTGGTCAG...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAATAACGAAAATTGCATaGGAACGCGAGCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRITKIA*ERELCS
Trigger: CGAGCACAGCTCGCGTTCTCATGCAATTTTCGTTAT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCGATTCTACATTCAGTaGGGGAGGACTTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLRFYIQ*GRTCQS
Trigger: ACTCTGACAAGTCCTCCCTCACTGAATGTAGAATCG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCAGGCAGGATTCCTTTaGTTCCATCTGTTATGTCTT +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAQAGFL*FHLLCL
Trigger: AAGACATAACAGATGGAAGCAAAGGAATCCTGCCTG...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTGACAGAGTCAACAAGTaGTCGGAACGTCTCATCGTA +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSDRVNK*SERLIV
Trigger: TACGATGAGACGTTCCGACCACTTGTTGACTCTGTC...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCCACCAAGGGAATCTTaGAGGAGCCTGGTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNPPRES*RSLVSF
Trigger: AAAGCTTACCAGGCTCCTCCAAGATTCCCTTGGTGG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGTCTTCTTGGAGGTCATaGATCTCAGCCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQSSWRS*ISAFTA
Trigger: GGCAGTGAAGGCTGAGATCCATGACCTCCAAGAAGA...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATTGGGAGAGGAGAAGCTaGCTTTACTTTGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNWERRS*LYFGTS
Trigger: GCTGGTTCCAAAGTAAAGCCAGCTTCTCCTCTCCCA...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCTCTGTCACCCAGGCTaGAATGCAGTAGTGTTATCT +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLLCHPG*NAVVLS
Trigger: AGATAACACTACTGCATTCCAGCCTGGGTGACAGAG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCGAAGATATGGTCAAATaGGTTAGGAATGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAEDMVK*VRNDSS
Trigger: AGAGGAGTCATTCCTAACTCATTTGACCATATCTTC...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTTTTGGTCTGATCCTTTaGGAGCAAATCTCGGATCTC +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSFGLIL*EQISDL
Trigger: GAGATCCGAGATTTGCTCTCAAAGGATCAGACCAAA...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTAGGATGTTCAGAGTATaGGTGCATGGGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLRMFRV*VHGKRW
Trigger: CCATCTTTTCCCATGCACGCATACTCTGAACATCCT...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTACCCGGCCGGTTATCTaGAGTTTTCAATTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSTRPVI*SFQFSD
Trigger: ATCTGAGAATTGAAAACTGCAGATAACCGGCCGGGT...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATTCACCCAGGCTGGAATaGAGTAGTGTTATCTCGACT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNSPRLE*SSVIST
Trigger: AGTCGAGATAACACTACTGCATTCCAGCCTGGGTGA...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATGGAATGCTTCCAGCCTaGATTAGTCATTCAATGGGC +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNGMLPA*ISHSMG
Trigger: GCCCATTGAATGACTAATCCAGGCTGGAAGCATTCC...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp ATCCATGTTAACAGGGAATCGACACTTCTCAGAAACTaGGCAACGATTCTACATTCAGTGAGGGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: IHVNRESTLLRN*ATILHSVREDL
Trigger: CAAGTCCTCCCTCACTGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTGTCGATTCCCTGTTAACATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGACTAAGTAAGAAGCCCTaGCCAGGTATTGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRLSKKP*PGIVDS
Trigger: AGAATCAACAATACCTGGTCAGGGCTTCTTACTTAG...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCGGATGGTCATGGTTTTaGGGTTTTAAAGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: SLQLFASLFSQKANAVSAGWSWF*GFKEAI
Trigger: AATAGCTTCTTTAAAACCTCAAAACCATGACCATCC...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATATGTGCCCTGGGAACTaGGCAGCTGAGTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNMCPGN*AAELKY
Trigger: ATATTTTAACTCAGCTGCTCAGTTCCCAGGGCACAT...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCTCAAGTGGGAAATGTaGGGCAGAACTGATATCCAT +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNLKWEM*GRTDIH
Trigger: ATGGATATCAGTTCTGCCTCACATTTCCCACTTGAG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCGACTTTCCATCTGTTaGTGGATTTCTCTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLRLSIC*WISLSR
Trigger: TCGAGAAAGAGAAATCCAGCAACAGATGGAAAGTCG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATTGTTCAGAGTATGCGTaGATGGGAAAAGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNCSEYA*MGKDGD
Trigger: GTCACCATCTTTTCCCATGCACGCATACTCTGAACA...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR GCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAACATATTTGGCTCAATaGAGAACCCAAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTTYLAQ*RTQNSS
Trigger: GCTGCTGTTTTGGGTTCTGCATTGAGCCAAATATGT...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATACAGTTCAAACTGCTTaGCATTCCAGTCATAGACGG +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNTVQTA*HSSHRR
Trigger: CCGTCTATGACTGGAATGCCAAGCAGTTTGAACTGT...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATGGGATCGAGAGATGTaGGTGAAGATATGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: TSSGKCEAELISMLTGNRWDREM*VKIWSN
Trigger: ATTTGACCATATCTTCACCCACATCTCTCGATCCCA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATCGCTTCATCATCTGCTaGTTCTCCAGTCTGGTTATA +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNRFIIC*FSSLVI
Trigger: TATAACCAGACTGGAGAACCAGCAGATGATGAAGCG...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR TCA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCAAAAATGGTTCCATTaGAACCTTGCAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: STSSGKCEAELISMLTGNQKWFH*NLAGQS
Trigger: ACTCTGTCCTGCAAGGTTTCAATGGAACCATTTTTG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATGACATTCTTGCGTGCTaGCTCAATGGTCTCTTATAT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNDILAC*LNGLLY
Trigger: ATATAAGAGACCATTGAGCCAGCACGCAAGAATGTC...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGTCAACCAGATTAAGTTaGTTGATCTGCAAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQSTRLS*LICKEA
Trigger: GGCCTCTTTGCAGATCAACCAACTTAATCTGGTTGA...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATAAGGAGATAAGCCGCTaGACAACAGATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNKEISR*TTDLHF
Trigger: AAAATGGAGATCTGTTGTCCAGCGGCTTATCTCCTT...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACACACTTCTCAGAAACTTaGCAACGATTCTACATTCAG +
Preference number: 4 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTHFSET*QRFYIQ
Trigger: CTGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTG...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTCTCTCTATACCAATATaGAACAAAACGGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLLSIPI*NKTGNS
Trigger: TGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAG...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CCA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGGCCCCAAGTATTGATTaGCGTATTCTTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQAPSID*RILCLK
Trigger: CTTTAGACAAAGAATACGCCAATCAATACTTGGGGC...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
3UTR CAA 72 bp AAAAGGCAACAACTGCACATTAGTGTATTTCTAAAATaGGGCAAGTTCTTGGTCTCTGTCTCTCTTACAGAC +
Preference number: 4 (lower is better)
Translates to: KRQQLHISVFLK*GKFLVSVSLTD
Trigger: GTCTGTAAGAGAGACAGAGACCAAGAACTTGCCCAATTTTAGAAATACACTAATGTGCAGTTGTTGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 90 bp ATCTTGAGAAGTGTCAATTCAAAATGTCTCAGGATGCTACGGTCCTaGGGCCCGAGCCGAAAGCGGGCGGCGGCGGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: ILRSVNSKCLRMLRS*GPSRKRAAAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCCGCCGCCCGCTTTCGGCTCGGGCCTCAGGACCGTAGCATCCTGAGACATTTTGAATTGACACTTCTCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CTGCAGAGCCGCATCCAATGCAGCCTGGACCTTGGGGGCAATGGCTaGACCCTCATAGTCTCTGGTGGTCCGGCTGGGCATGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LQSRIQCSLDLGGNG*TLIVSGGPAGHVQL
Trigger: GAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CATCCTGCAGAGCCGCATCCAATGCAGCCTGGACCTTGGGGGCAATaGCTGGACCCTCATAGTCTCTGGTGGTCCGGCTGGGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: HPAEPHPMQPGPWGQ*LDPHSLWWSGWACP
Trigger: TGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCCCTTGTGCGCCGGTCTaGGCTTGCCGTTCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LALLAAAGMKALRRLRTFPCAPV*ACRSLP
Trigger: TGGCAGCGAACGGCAAGCCAAGACCGGCGCACAAGG...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGTGCGCCGGTCTTGGCTaGCCGTTCGCTGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGCAGLG*PFAASK
Trigger: CTTGCTGGCAGCGAACGGCAAGCCAAGACCGGCGCA...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp TCTCATCTTCATCCTGCAGAGCCGCATCCAATGCAGCCTGGACCTTaGGGGCAATGGCTGGACCCTCATAGTCTCTGGTGGTCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SHLHPAEPHPMQPGP*GQWLDPHSLWWSGW
Trigger: CCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATGAAGATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTCCATGGCCTTGATCTaGGCGCCCAGCATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSMALI*APSISA
Trigger: TGCCGAGATGCTGGGCGCCAAGATCAAGGCCATGGA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAAATGCAGCCTGGACCTaGGGGGCAATGGCTGGACCC +
Preference number: 5 (lower is better)
Translates to: VMEVWVEQFKQHAGIGRENAAWT*GAMAGP
Trigger: GGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGACTGTCCCCTCAGGCTaGGCTCATGGACTCAGACAC +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQTVPSG*AHGLRH
Trigger: GTGTCTGAGTCCATGAGCCAAGCCTGAGGGGACAGT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CAGCCTGGACCTTGGGGGCAATGGCTGGACCCTCATAGTCTCTGGTaGTCCGGCTGGGCATGTCCAGCTCTAACAGCACAATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: QPGPWGQWLDPHSLW*SGWACPALTAQCFL
Trigger: CAGAAAACATTGTGCTGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCCTGTGCTCGTTCATGTaGGTAGCACCGACAGAACGG +
Preference number: 5 (lower is better)
Translates to: LALLAAAGMKALRRLRTFLCSFM*VAPTER
Trigger: CCGTTCTGTCGGTGCTACCAACATGAACGAGCACAG...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGGAAGCTGGCTTTACTTaGGAACCAGCCCCCGAGACT +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQEAGFT*EPAPET
Trigger: AGTCTCGGGGGCTGGTTCCAAAGTAAAGCCAGCTTC...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAAGCACTCTGGCGCCCTaGGTCATGGAGGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRSTLAP*VMEVWV
Trigger: CACCCACACCTCCATGACCAAGGGCGCCAGAGTGCT...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp ATGCAGCCTGGACCTTGGGGGCAATGGCTGGACCCTCATAGTCTCTaGTGGTCCGGCTGGGCATGTCCAGCTCTAACAGCACAATGTTTT +
Preference number: 5 (lower is better)
Translates to: MQPGPWGQWLDPHSL*WSGWACPALTAQCF
Trigger: AAAACATTGTGCTGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGACTTGCTTTCTGGCTTaGCTAGCTGCTGCCGGCATG +
Preference number: 5 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGTCFLA*LAAAGM
Trigger: CATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGT...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 90 bp GCCCTATATCGGGCCTCTGGACGAATCATCATGGACATTCTTGCGTaGTGGCTCAATGGTCTCTTATATCCCACGGCTGAGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: ALYRASGRIIMDILA*WLNGLLYPTAETGR
Trigger: GCGGCCAGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 90 bp TGCATCCACCTGTATCTCATCTTCATCCTGCAGAGCCGCATCCAATaGAGCCTGGACCTTGGGGGCAATGGCTGGACCCTCATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: CIHLYLIFILQSRIQ*SLDLGGNGWTLIVS
Trigger: AGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATGAAGATGAGATACAGGTGGATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CGCTTCTCTCGCCTCTTCCTCCTACCAATGGACCGTTTTTCCAGCTaGGCCTTGAGCCGAGCAATCTCTTCCTGGAATTCTCGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RFSRLFLLPMDRFSS*ALSRAISSWNSRRR
Trigger: CCTCCTTCGAGAATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAAAAACGGTCCATTGGTAGGAGGAAGAGGCGAGAGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CCTTGGGGGCAATGGCTGGACCCTCATAGTCTCTGGTGGTCCGGCTaGGCATGTCCAGCTCTAACAGCACAATGTTTTCTGCCCTATATC +
Preference number: 5 (lower is better)
Translates to: PWGQWLDPHSLWWSG*ACPALTAQCFLPYI
Trigger: GATATAGGGCAGAAAACATTGTGCTGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGTGTCAGGCCTCTCTTaGAGCTCAAGCCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTVSGLS*SSSLLV
Trigger: GACCAAAAGGCTTGAGCTCAAAGAGAGGCCTGACAC...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGCCTGATTCTGCCCTATaGTTCAACAAGAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGPDSAL*FNKKGA
Trigger: GGCTCCCTTCTTGTTGAACAATAGGGCAGAATCAGG...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATCGGCCCACGCCCCAGTaGCAGCACTCTGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNRPTPQ*QHSGAL
Trigger: AAGGGCGCCAGAGTGCTGCAACTGGGGCGTGGGCCG...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp CTATATCGGGCCTCTGGACGAATCATCATGGACATTCTTGCGTGCTaGCTCAATGGTCTCTTATATCCCACGGCTGAGACTGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LYRASGRIIMDILAC*LNGLLYPTAETGRF
Trigger: GAAGCGGCCAGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTCATGGGCCGTCCCTTaGGGGTTCTTCACAGACACC +
Preference number: 5 (lower is better)
Translates to: STFSEGGLVRVRQEKQRASWAVP*GFFTDT
Trigger: GGTGTCTGTGAAGAACCCCAAAGGGACGGCCCATGA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TGGTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGCCTGACCAGGTATTGTaGATTCTGGGATCGAGAGAT +
Preference number: 5 (lower is better)
Translates to: WSWRCGWSNSSSMQALDGPDQVL*ILGSRD
Trigger: ATCTCTCGATCCCAGAATCAACAATACCTGGTCAGG...CCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGAGCCCTGACCAGGTATaGTTGATTCTGGGATCGAGA +
Preference number: 5 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTSPDQV*LILGSR
Trigger: TCTCGATCCCAGAATCAACAATACCTGGTCAGGGCT...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAATCACAGTCTTGGCATaGCCACCAAGGGAATCTTGG +
Preference number: 5 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREITVLA*PPRESW
Trigger: CCAAGATTCCCTTGGTGGCAATGCCAAGACTGTGAT...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 90 bp GGACATTCTTGCGTGCTGGCTCAATGGTCTCTTATATCCCACGGCTaGGACTGGCCGCTTCATCATCTGCTGGTTCTCCAGTCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: GHSCVLAQWSLISHG*DWPLHHLLVLQSGY
Trigger: ATAACCAGACTGGAGAACCAGCAGATGATGAAGCGGCCAGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 90 bp TTGGGCATTTCATGGGCCGTCCCTTTGGGGTTCTTCACAGACACCTaGCCCAGCTTAACATCCACATCCACCACTTTGTCATACGAAGCA +
Preference number: 5 (lower is better)
Translates to: LGISWAVPLGFFTDT*PSLTSTSTTLSYEA
Trigger: TGCTTCGTATGACAAAGTGGTGGATGTGGATGTTAAGCTGGGGCAGGTGTCTGTGAAGAACCCCAAAGGGACGGCCCATGAAATGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 90 bp GTGCTTTCAAATGATGATGCATCCACCTGTATCTCATCTTCATCCTaGAGAGCCGCATCCAATGCAGCCTGGACCTTGGGGGCAATGGCT +
Preference number: 5 (lower is better)
Translates to: VLSNDDASTCISSSS*RAASNAAWTLGAMA
Trigger: AGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATGAAGATGAGATACAGGTGGATGCATCATCATTTGAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTTTTCCTGTCCCAGTTaGTCCATAGGCAAAAATGGT +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQFSCPS*SIGKNG
Trigger: ACCATTTTTGCCTATGGACAAACTGGGACAGGAAAA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTCTATAATAAGATGCTaGAGTTTCAGCTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSIIRC*SFSSLV
Trigger: CACCAGGGAGCTGAAACTCAAGCATCTTATTATAGA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATCCTCTCTGCAGCTTTTaGCTAGTCTCTTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDPLCSF*LVSSLR
Trigger: TCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGAGG...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp CTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCTCAGAACATTCTACAGACTTAGGTCTTaGACAGGATGGTCATGGTTT +
Preference number: 5 (lower is better)
Translates to: LALLAAAGMKALRRLRTFYRLRS*TGWSWF
Trigger: AAACCATGACCATCCTGTCAAAGACCTAAGTCTGTA...GAATGTTCTGAGCCGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTCAAAGGTGAAGGTCTaGGGCATTTCATGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: STFSEGGLVRVRQEKQRASKVKV*GISWAV
Trigger: GACGGCCCATGAAATGCCCAAGACCTTCACCTTTGA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TTAGACTTGCTTTCTGGCTTTGCTAGCTGCTGCCGGCATGAAGGCCCTCAGACGGCAAAAATGGTTCCATaGAAACCTTGCAGGACAGAG +
Preference number: 5 (lower is better)
Translates to: LDLLSGFASCCRHEGPQTAKMVP*KPCRTE
Trigger: CTCTGTCCTGCAAGGTTTCAATGGAACCATTTTTGC...CGTCTGAGGGCCTTCATGCCGGCAGCAGCTAGCAAAGCCAGAAAGCAAGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCGCCACCATCACAGTCTaGGCATTGCCACCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SLQLFASLFSQKANAVSAATITV*ALPPRE
Trigger: TTCCCTTGGTGGCAATGCCAAGACTGTGATGGTGGC...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGAGATGGTCTGAGGTGTaGTCTCCAGTACGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: STFSEGGLVRVRQEKQRARWSEV*SPVRLN
Trigger: GTTGAGGCGTACTGGAGACAACACCTCAGACCATCT...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp GCACAATGTTTTCTGCCCTATATCGGGCCTCTGGACGAATCATCATaGACATTCTTGCGTGCTGGCTCAATGGTCTCTTATATCCCACGG +
Preference number: 5 (lower is better)
Translates to: AQCFLPYIGPLDESS*TFLRAGSMVSYIPR
Trigger: CCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATAGGGCAGAAAACATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGTCATTGACCCTTGGTTaGTTCTTAATGTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSLTLG*FLMFLA
Trigger: TGCCAAAAACATTAAGAACAAACCAAGGGTCAATGA...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCAGCTCTTGGCGCTCCTaGATGTGTTCTTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLQLFASLFSQKANAVSASSWRS*MCSSWR
Trigger: CCTCCAAGAAGAACACATCAAGGAGCGCCAAGAGCT...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGGCCCACGCCCCAGTTGCAGAGTGTATTTCTAAAATaGGGCAAGTTCTTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: DLSESDRKSRERPTPQLQSVFLK*GKFLVS
Trigger: AGAGACCAAGAACTTGCCCAATTTTAGAAATACACT...CTGCAACTGGGGCGTGGGCCGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATACCCACCTTAGCGTTTaGTTCTTATTCAAACAGGCA +
Preference number: 5 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDTHLSV*FLFKQA
Trigger: TGCCTGTTTGAATAAGAACAAAACGCTAAGGTGGGT...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGACTTCATGCCTATGATTaGTGGCCTTGGGTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRLHAYD*WPWVLN
Trigger: ATTCAGAACCCAAGGCCACAAATCATAGGCATGAAG...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GTCATGGAGGTGTGGGTGGAGCAATTCAAGCAGCATGCAGGCATTGGACGGGAAGTACAAAACAAAGCCTaGCGTGATAGACAATCACCA +
Preference number: 5 (lower is better)
Translates to: VMEVWVEQFKQHAGIGREVQNKA*RDRQSP
Trigger: TGGTGATTGTCTATCACGCAAGGCTTTGTTTTGTAC...TTCCCGTCCAATGCCTGCATGCTGCTTGAATTGCTCCACCCACACCTCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAGAAGCAGCCTTTTCCTaGCCATTCATGGGCCGACAG +
Preference number: 5 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTEAAFS*PFMGRQ
Trigger: CTGTCGGCCCATGAATGGCAAGGAAAAGGCTGCTTC...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTTTACTCTCCATGGCCTaGATCTTGGCGCCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLLLSMA*ILAPSI
Trigger: GATGCTGGGCGCCAAGATCAAGGCCATGGAGAGTAA...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATAGCTTTTTGAGTTTTTaGGTCTTGATGTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDSFLSF*VLMSTS
Trigger: AGAGGTGGACATCAAGACCAAAAAACTCAAAAAGCT...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCTCATCATGGACATTCTaGCGTGCTGGCTCAATGGTC +
Preference number: 5 (lower is better)
Translates to: SLQLFASLFSQKANAVSASSWTF*RAGSMV
Trigger: GACCATTGAGCCAGCACGCAAGAATGTCCATGATGA...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAAAATTGGGCAAGTTCTaGGTCTCTGTCTCTCTTACA +
Preference number: 5 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRKLGKF*VSVSLT
Trigger: TGTAAGAGAGACAGAGACCAAGAACTTGCCCAATTT...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAGGCTTGGCTCATGGACTCAGACACCCACATGGGAATGCTTCCAGCCTGGATGAATTCAGATTAGCTTaGAGGAAATGTGGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SGLAHGLRHPHGNASSLDEFRLA*RKCGVR
Trigger: TCTCACACCACATTTCCTCAAAGCTAATCTGAATTC...ATCCAGGCTGGAAGCATTCCCATGTGGGTGTCTGAGTCCATGAGCCAAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCTCCACATCCACCACTTaGTCATACGAAGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SLQLFASLFSQKANAVSASTSTT*SYEAAF
Trigger: AAAGGCTGCTTCGTATGACAAAGTGGTGGATGTGGA...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTCTGCAGCTTTTTGCTAGTCTCTTCTCTCAGAAGGCAAATGCTGTTTCCGCCCTTGATGTGTTCTTCTaGGAGGTCATGGATCTCAGC +
Preference number: 5 (lower is better)
Translates to: SLQLFASLFSQKANAVSALDVFF*EVMDLS
Trigger: GCTGAGATCCATGACCTCCAAGAAGAACACATCAAG...GGCGGAAACAGCATTTGCCTTCTGAGAGAAGAGACTAGCAAAAAGCTGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp AGCCTCCTTTCTTCCACAAAACAGGCCCACTGCAGAGCATGCTCTGGATGCAGAACACTTCTCAGAAACTaGGCAACGATTCTACATTCA +
Preference number: 5 (lower is better)
Translates to: SLLSSTKQAHCRACSGCRTLLRN*ATILHS
Trigger: TGAATGTAGAATCGTTGCCAAGTTTCTGAGAAGTGT...TCTGCATCCAGAGCATGCTCTGCAGTGGGCCTGTTTTGTGGAAGAAAGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 90 bp TCTATAATAAGATGCTTGAGTTTCAGCTCCCTGGTGAGCTCATTCTaGGTCTGCTCTAGCTCTTGGCGCTCCTTGATGTGTTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SIIRCLSFSSLVSSF*VCSSSWRSLMCSSW
Trigger: CCAAGAAGAACACATCAAGGAGCGCCAAGAGCTAGAGCAGACTCAGAATGAGCTCACCAGGGAGCTGAAACTCAAGCATCTTATTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 90 bp GGCAAAAATGGTTCCATTGAAACCTTGCAGGACAGAGTCAACAAGTaGTCGGAACGTCTCATCGTACAGTTCAAACTGCTTGGCATTCCA +
Preference number: 5 (lower is better)
Translates to: GKNGSIETLQDRVNK*SERLIVQFKLLGIP
Trigger: TGGAATGCCAAGCAGTTTGAACTGTACGATGAGACGTTCCGACCACTTGTTGACTCTGTCCTGCAAGGTTTCAATGGAACCATTTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGTTGTTCTTAATGTTTTaGGCACGGTTGGCATATCGC +
Preference number: 5 (lower is better)
Translates to: STFSEGGLVRVRQEKQRALFLMF*ARLAYR
Trigger: GCGATATGCCAACCGTGCCAAAAACATTAAGAACAA...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ATCTGCCTAGCTACTCTTCTGCTCTCTATACCAATATGGAACAAAACGGGGAATGGAACAGTTCTGAGTTaGGGCCGAATCCTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ICLATLLLSIPIWNKTGNGTVLS*GRILSA
Trigger: TGCAGAGAGGATTCGGCCCAAACTCAGAACTGTTCC...ATTCCCCGTTTTGTTCCATATTGGTATAGAGAGCAGAAGAGTAGCTAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTAGCACCAGAGACTGCTaGGAAAGGGACAGCTTCATT +
Preference number: 5 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLSTRDC*ERDSFI
Trigger: AATGAAGCTGTCCCTTTCCAAGCAGTCTCTGGTGCT...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTAGTCCCTCAGTGGGCTaGGTAGGTCCTCTACATATT +
Preference number: 5 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLSPSVG*VGPLHI
Trigger: AATATGTAGAGGACCTACCAAGCCCACTGAGGGACT...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GAGATGCTAATTAAAAGATGTTTCCCAGAGGGGCTGAGTGCCAGATTAGGAACAGGGGTCTATTGGGGGTaGCATACACAGTCTCAAACT +
Preference number: 5 (lower is better)
Translates to: EMLIKRCFPEGLSARLGTGVYWG*HTQSQT
Trigger: AGTTTGAGACTGTGTATGCAACCCCCAATAGACCCC...TGTTCCTAATCTGGCACTCAGCCCCTCTGGGAAACATCTTTTAATTAGCATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATCAGTGAGGGAGGACTaGTCAGAGTCAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: TSSGKCEAELISMLTGNRSVRED*SESDRK
Trigger: TTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTGGTTCCATTGAAACCTaGCAGGACAGAGTCAACAAG +
Preference number: 5 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLGSIET*QDRVNK
Trigger: CTTGTTGACTCTGTCCTGCAAGGTTTCAATGGAACC...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCCAGCGTTAGGTCAGTCTTAAGAAAGTGCTTCATGCCTATGATTTGTGGCCTTGCGGAAAGGGAGAGGTaGATCTTGGTAGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SSVRSVLRKCFMPMICGLAERER*ILVASF
Trigger: AAAAGAAGCTACCAAGATCAACCTCTCCCTTTCCGC...AAGGCCACAAATCATAGGCATGAAGCACTTTCTTAAGACTGACCTAACGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAACCAGATTAAGTTGGTaGATCTGCAAAGAGGCCACC +
Preference number: 5 (lower is better)
Translates to: TSSGKCEAELISMLTGNRTRLSW*ICKEAT
Trigger: GGTGGCCTCTTTGCAGATCAACCAACTTAATCTGGT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCTACATTCAGTGAGGGAGGACTTGTCAGAGTCAGACAGGAAAAGCAGAGAGCGCTATTGCTCCCAACATaGAATCATTCAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: STFSEGGLVRVRQEKQRALLLPT*NHSEAE
Trigger: TTCTGCTTCTGAATGATTCAATGTTGGGAGCAATAG...CGCTCTCTGCTTTTCCTGTCTGACTCTGACAAGTCCTCCCTCACTGAATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 90 bp GTCTCTTTAAGTTCCAAGGTCTCCTCATCTCGACTTTCCATCTGTTaGTGGATTTCTCTTTCTCGACGTTTCTGCTCTGCAATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VSLSSKVSSSRLSIC*WISLSRRFCSAISC
Trigger: ACAGGAAATTGCAGAGCAGAAACGTCGAGAAAGAGAAATCCAGCAACAGATGGAAAGTCGAGATGAGGAGACCTTGGAACTTAAAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGAAGGTCCTCTACATATTaGGCTCAATGCAGAACCCAA +
Preference number: 5 (lower is better)
Translates to: TSSGKCEAELISMLTGNRRSSTY*AQCRTQ
Trigger: TTGGGTTCTGCATTGAGCCAAATATGTAGAGGACCT...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp ACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCGATTAGAGCCCCAAGTATaGATTGGCGTATTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TSSGKCEAELISMLTGNRLEPQV*IGVFFV
Trigger: GACAAAGAATACGCCAATCAATACTTGGGGCTCTAA...TCGATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GCTCTCTATACCAATATGGAACAAAACGGGGAATTCAGAAGTGCCACAATACAGTTTTGGTCTGATCCTTaGAGAGCAAATCTCGGATCT +
Preference number: 5 (lower is better)
Translates to: ALYTNMEQNGEFRSATIQFWSDP*RANLGS
Trigger: AGATCCGAGATTTGCTCTCAAAGGATCAGACCAAAA...CTGTATTGTGGCACTTCTGAATTCCCCGTTTTGTTCCATATTGGTATAGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATTTCAACCAGATTAAGTaGGTTGATCTGCAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: STSSGKCEAELISMLTGNFNQIK*VDLQRG
Trigger: GCCTCTTTGCAGATCAACCAACTTAATCTGGTTGAA...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATTCTCTTGCTTTCCACTaGAACTATCGCACTTTACCT +
Preference number: 5 (lower is better)
Translates to: STSSGKCEAELISMLTGNSLAFH*NYRTLP
Trigger: AGGTAAAGTGCGATAGTTCAAGTGGAAAGCAAGAGA...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTATTCTGAACTCTCCTTaGAGCCTATTCAATCACACA +
Preference number: 5 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSILNSP*SLFNHT
Trigger: TGTGTGATTGAATAGGCTCAAAGGAGAGTTCAGAAT...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp GCATTTCATTCAGGAAACAAGGGCAGGCAGAAAGGTGACAGATTTCTGAACAGTTTTATCGGATCCATTTaGAGAGAAGAAAAGCACCAG +
Preference number: 5 (lower is better)
Translates to: AFHSGNKGRQKGDRFLNSFIGSI*REEKHQ
Trigger: CTGGTGCTTTTCTTCTCTCAAAATGGATCCGATAAA...ACTGTTCAGAAATCTGTCACCTTTCTGCCTGCCCTTGTTTCCTGAATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 90 bp GAGCTTTTCAACTTTGACATGATGAACTCTGATCCAGTCAAATCTTaGGAAGTGTCAATTCAAAATGTCTCAGGATGCTACGGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: ELFNFDMMNSDPVKS*EVSIQNVSGCYGPE
Trigger: CTCAGGACCGTAGCATCCTGAGACATTTTGAATTGACACTTCTCAAGATTTGACTGGATCAGAGTTCATCATGTCAAAGTTGAAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS-3UTR CAA 90 bp TCAACCTCAAGTGGGAAATGTGAGGCAGAACTGATATCCATGTTAACAGGGAATCAACAGATCTCCATTTaGCAGAATGCTAAGACATTG +
Preference number: 5 (lower is better)
Translates to: STSSGKCEAELISMLTGNQQISI*QNAKTL
Trigger: CAATGTCTTAGCATTCTGCAAAATGGAGATCTGTTG...ATTCCCTGTTAACATGGATATCAGTTCTGCCTCACATTTCCCACTTGAGGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 72 bp AGTGTCAATTCAAAATGTCTCAGGATGCTACGGTCCTaGGGCCCGAGCCGAAAGCGGGCGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SVNSKCLRMLRS*GPSRKRAAAAA
Trigger: CGCCGCCGCCGCCGCCCGCTTTCGGCTCGGGCCTCAGGACCGTAGCATCCTGAGACATTTTGAATTGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp GAGCCGCATCCAATGCAGCCTGGACCTTGGGGGCAATaGCTGGACCCTCATAGTCTCTGGTGGTCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: EPHPMQPGPWGQ*LDPHSLWWSGW
Trigger: CCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp CGCATCCAATGCAGCCTGGACCTTGGGGGCAATGGCTaGACCCTCATAGTCTCTGGTGGTCCGGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: RIQCSLDLGGNG*TLIVSGGPAGH
Trigger: ATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp GGACCTTGGGGGCAATGGCTGGACCCTCATAGTCTCTaGTGGTCCGGCTGGGCATGTCCAGCTCTAACAGCA +
Preference number: 6 (lower is better)
Translates to: GPWGQWLDPHSL*WSGWACPALTA
Trigger: TGCTGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp CATCCTGCAGAGCCGCATCCAATGCAGCCTGGACCTTaGGGGCAATGGCTGGACCCTCATAGTCTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: HPAEPHPMQPGP*GQWLDPHSLWW
Trigger: CCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp CCTTGGGGGCAATGGCTGGACCCTCATAGTCTCTGGTaGTCCGGCTGGGCATGTCCAGCTCTAACAGCACAA +
Preference number: 6 (lower is better)
Translates to: PWGQWLDPHSLW*SGWACPALTAQ
Trigger: TTGTGCTGTTAGAGCTGGACATGCCCAGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 72 bp GCAGGCCCCACGTTGGCCACCATCACAGTCTTGGCATaGCCACCAAGGGAATCTTGGAGGAGCCTGGTAAGC +
Preference number: 6 (lower is better)
Translates to: AGPTLATITVLA*PPRESWRSLVS
Trigger: GCTTACCAGGCTCCTCCAAGATTCCCTTGGTGGCAATGCCAAGACTGTGATGGTGGCCAACGTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp CTGTATCTCATCTTCATCCTGCAGAGCCGCATCCAATaGAGCCTGGACCTTGGGGGCAATGGCTGGACCCTC +
Preference number: 6 (lower is better)
Translates to: LYLIFILQSRIQ*SLDLGGNGWTL
Trigger: GAGGGTCCAGCCATTGCCCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATGAAGATGAGATACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp AGGCAAATGCTGTTTCCGCCCTGGGAGAGGAGAAGCTaGCTTTACTTTGGAACCAGCCCCCGAGACTGTGGA +
Preference number: 6 (lower is better)
Translates to: RQMLFPPWERRS*LYFGTSPRDCG
Trigger: TCCACAGTCTCGGGGGCTGGTTCCAAAGTAAAGCCAGCTTCTCCTCTCCCAGGGCGGAAACAGCATTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 72 bp TGCGTGCTGGCTCAATGGTCTCTTATATCCCACGGCTaGGACTGGCCGCTTCATCATCTGCTGGTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: CVLAQWSLISHG*DWPLHHLLVLQ
Trigger: CTGGAGAACCAGCAGATGATGAAGCGGCCAGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp TCATGGGCCGTCCCTTTGGGGTTCTTCACAGACACCTaGCCCAGCTTAACATCCACATCCACCACTTTGTCA +
Preference number: 6 (lower is better)
Translates to: SWAVPLGFFTDT*PSLTSTSTTLS
Trigger: TGACAAAGTGGTGGATGTGGATGTTAAGCTGGGGCAGGTGTCTGTGAAGAACCCCAAAGGGACGGCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp TCTCCCCTTGTGCGCCGGTCTTGGCTTGCCGTTCGCTaGCAGCAAGATCTACAAGGTTCAATTTTCCTACAC +
Preference number: 6 (lower is better)
Translates to: SPLVRRSWLAVR*QQDLQGSIFLH
Trigger: GTGTAGGAAAATTGAACCTTGTAGATCTTGCTGGCAGCGAACGGCAAGCCAAGACCGGCGCACAAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp CGGGCCTCTGGACGAATCATCATGGACATTCTTGCGTaGTGGCTCAATGGTCTCTTATATCCCACGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RASGRIIMDILA*WLNGLLYPTAE
Trigger: CTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp CGCCTCTTCCTCCTACCAATGGACCGTTTTTCCAGCTaGGCCTTGAGCCGAGCAATCTCTTCCTGGAATTCT +
Preference number: 6 (lower is better)
Translates to: RLFLLPMDRFSS*ALSRAISSWNS
Trigger: AGAATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAAAAACGGTCCATTGGTAGGAGGAAGAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 72 bp ACATCCACCACTTTGTCATACGAAGCAGCCTTTTCCTaGCCATTCATGGGCCGACAGCGAACCACCACCCTG +
Preference number: 6 (lower is better)
Translates to: TSTTLSYEAAFS*PFMGRQRTTTL
Trigger: CAGGGTGGTGGTTCGCTGTCGGCCCATGAATGGCAAGGAAAAGGCTGCTTCGTATGACAAAGTGGTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 72 bp GCCACCAAGGGAATCTTGGAGGAGCCTGGTAAGCTTTaGGTCCCGATATGGAATGTGAGTGCTTTTGCCGTC +
Preference number: 6 (lower is better)
Translates to: ATKGILEEPGKL*VPIWNVSAFAV
Trigger: GACGGCAAAAGCACTCACATTCCATATCGGGACTCAAAGCTTACCAGGCTCCTCCAAGATTCCCTTGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp AATGATGATGCATCCACCTGTATCTCATCTTCATCCTaGAGAGCCGCATCCAATGCAGCCTGGACCTTGGGG +
Preference number: 6 (lower is better)
Translates to: NDDASTCISSSS*RAASNAAWTLG
Trigger: CCCCAAGGTCCAGGCTGCATTGGATGCGGCTCTGCAGGATGAAGATGAGATACAGGTGGATGCATCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 90 bp TTAACATCCACATCCACCACTTTGTCATACGAAGCAGCCTTTTCCTaGCCATTCATGGGCCGACAGCGAACCACCACCCTGACTGACTCT +
Preference number: 6 (lower is better)
Translates to: LTSTSTTLSYEAAFS*PFMGRQRTTTLTDS
Trigger: AGAGTCAGTCAGGGTGGTGGTTCGCTGTCGGCCCATGAATGGCAAGGAAAAGGCTGCTTCGTATGACAAAGTGGTGGATGTGGATGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 90 bp TTCTTCACAGACACCTGCCCCAGCTTAACATCCACATCCACCACTTaGTCATACGAAGCAGCCTTTTCCTTGCCATTCATGGGCCGACAG +
Preference number: 6 (lower is better)
Translates to: FFTDTCPSLTSTSTT*SYEAAFSLPFMGRQ
Trigger: CTGTCGGCCCATGAATGGCAAGGAAAAGGCTGCTTCGTATGACAAAGTGGTGGATGTGGATGTTAAGCTGGGGCAGGTGTCTGTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 90 bp TTTCTGCCCTATATCGGGCCTCTGGACGAATCATCATGGACATTCTaGCGTGCTGGCTCAATGGTCTCTTATATCCCACGGCTGAGACTG +
Preference number: 6 (lower is better)
Translates to: FLPYIGPLDESSWTF*RAGSMVSYIPRLRL
Trigger: CAGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATAGGGCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 72 bp GTGTCAGGCCTCTCTTTGAGCTCAAGCCTTTTGGTCTaGTCCTTTGAGAGCAAATCTCGGATCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSGLSLSSSLLV*SFESKSRISSW
Trigger: CCAGGAGGAGATCCGAGATTTGCTCTCAAAGGATCAGACCAAAAGGCTTGAGCTCAAAGAGAGGCCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp ATATCGGGCCTCTGGACGAATCATCATGGACATTCTTaGGTGCTGGCTCAATGGTCTCTTATATCCCACGGC +
Preference number: 6 (lower is better)
Translates to: ISGLWTNHHGHS*VLAQWSLISHG
Trigger: GCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp GCCTCTGGACGAATCATCATGGACATTCTTGCGTGCTaGCTCAATGGTCTCTTATATCCCACGGCTGAGACT +
Preference number: 6 (lower is better)
Translates to: ASGRIIMDILAC*LNGLLYPTAET
Trigger: AGTCTCAGCCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 90 bp GCTGTGATCCTCTACAATGGCCCGCTTCTCAATCTCCAGTTTTTCTaGCTGTTCCCGCCAGTAATCATCCTTATCATCCCCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: AVILYNGPLLNLQFF*LFPPVIILIIPFLL
Trigger: GAGGAGGAAGGGGATGATAAGGATGATTACTGGCGGGAACAGCAAGAAAAACTGGAGATTGAGAAGCGGGCCATTGTAGAGGATCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS TCA 72 bp AGGAGCCTGGTAAGCTTTGAGTCCCGATATGGAATGTaGGTGCTTTTGCCGTCCACTAGAGCAGAGATGACA +
Preference number: 6 (lower is better)
Translates to: RSLVSFESRYGM*VLLPSTRAEMT
Trigger: TGTCATCTCTGCTCTAGTGGACGGCAAAAGCACTCACATTCCATATCGGGACTCAAAGCTTACCAGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp GCAAGATCTACAAGGTTCAATTTTCCTACACGGATGTaGTTTTCACCATCGAGGCCCACCTCGCTGCACTCA +
Preference number: 6 (lower is better)
Translates to: ARSTRFNFPTRM*FSPSRPTSLHS
Trigger: TGAGTGCAGCGAGGTGGGCCTCGATGGTGAAAACCACATCCGTGTAGGAAAATTGAACCTTGTAGATCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 72 bp GACACCTGCCCCAGCTTAACATCCACATCCACCACTTaGTCATACGAAGCAGCCTTTTCCTTGCCATTCATG +
Preference number: 6 (lower is better)
Translates to: DTCPSLTSTSTT*SYEAAFSLPFM
Trigger: CATGAATGGCAAGGAAAAGGCTGCTTCGTATGACAAAGTGGTGGATGTGGATGTTAAGCTGGGGCAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CAA 72 bp TATATCGGGCCTCTGGACGAATCATCATGGACATTCTaGCGTGCTGGCTCAATGGTCTCTTATATCCCACGG +
Preference number: 6 (lower is better)
Translates to: YIGPLDESSWTF*RAGSMVSYIPR
Trigger: CCGTGGGATATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp TTTCTGCCCTATATCGGGCCTCTGGACGAATCATCATaGACATTCTTGCGTGCTGGCTCAATGGTCTCTTAT +
Preference number: 6 (lower is better)
Translates to: FLPYIGPLDESS*TFLRAGSMVSY
Trigger: ATAAGAGACCATTGAGCCAGCACGCAAGAATGTCCATGATGATTCGTCCAGAGGCCCGATATAGGGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS GCA 72 bp AGTTCCAAGGTCTCCTCATCTCGACTTTCCATCTGTTaGTGGATTTCTCTTTCTCGACGTTTCTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSKVSSSRLSIC*WISLSRRFCSA
Trigger: TGCAGAGCAGAAACGTCGAGAAAGAGAAATCCAGCAACAGATGGAAAGTCGAGATGAGGAGACCTTGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp GGTTCCATTGAAACCTTGCAGGACAGAGTCAACAAGTaGTCGGAACGTCTCATCGTACAGTTCAAACTGCTT +
Preference number: 6 (lower is better)
Translates to: GSIETLQDRVNK*SERLIVQFKLL
Trigger: AAGCAGTTTGAACTGTACGATGAGACGTTCCGACCACTTGTTGACTCTGTCCTGCAAGGTTTCAATGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375712.4
CDS CCA 72 bp TCTTCTCCTCTGCAACCAAGCTGTGATCCTCTACAATaGCCCGCTTCTCAATCTCCAGTTTTTCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: SSPLQPSCDPLQ*PASQSPVFLAV
Trigger: AACAGCAAGAAAAACTGGAGATTGAGAAGCGGGCCATTGTAGAGGATCACAGCTTGGTTGCAGAGGAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375712.4