RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF2C (Homo sapiens)

Ensembl gene IDs: ENSG00000142945

Ensembl transcript IDs: ENST00000372217.5, ENST00000372224.9, ENST00000423289.1, ENST00000452259.5, ENST00000455186.5, ENST00000472235.1, ENST00000480574.1, ENST00000493027.5

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATaGTGCGGAGAAAGCTCTATGCTGAGAACATTCCCCTTGATGGAA +
Preference number: 1 (lower is better)
Translates to: NPRELSISSQSTQAG*CGESSMLRTFPLME
Trigger: TTCCATCAAGGGGAATGTTCTCAGCATAGAGCTTTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCCCAGCTCAGACCCTaGCTAGACCCACCAGGTACC +
Preference number: 2 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSQLRP*LDPPGT
Trigger: GGTACCTGGTGGGTCTAGGCAGGGTCTGAGCTGGGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTGCCCTGGGCCCAGATaGCCCCATACTTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQCPGPR*PHTWHL
Trigger: TAAATGCCAAGTATGGGGGCATCTGGGCCCAGGGCA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATGCCCTGGGCCCAGATaGCCCCATACTTGGCATTTA +
Preference number: 2 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQCPGPR*PHTWHL
Trigger: TAAATGCCAAGTATGGGGGCATCTGGGCCCAGGGCA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCCACGCAGGCAGGATaGTGCGGAGAAAGCTCTATG +
Preference number: 2 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSTQAG*CGESSM
Trigger: CATAGAGCTTTCTCCGCAGCATCCTGCCTGCGTGGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGCCAGGGAAGAGGCTaGGTGTCAAACCAAACAGAT +
Preference number: 2 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGQGRG*VSNQTD
Trigger: ATCTGTTTGGTTTGACACCCAGCCTCTTCCCTGGCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
3UTR-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTGAGAACATTCCCCTaGATGGAAAGAAGGGCAACA +
Preference number: 3 (lower is better)
Translates to: PRELSISSQSTQAGCCGELRTFP*MERRAT
Trigger: TGTTGCCCTTCTTTCCATCAAGGGGAATGTTCTCAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGAAACAGGCGGGCCTaGAGCGACGAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGNRRA*SDESMA
Trigger: GGCCATGGACTCGTCGCTTCAGGCCCGCCTGTTTCC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCCTGCTCTTCCAGCTaGATGGCCAGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEACSSS*MARRKA
Trigger: GGCCTTGCGCCTGGCCATGCAGCTGGAAGAGCAGGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACCACTGGGCCCACTGTaGGGGCTCAGCTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEPLGPL*GLSSLT
Trigger: GGTCAAGGAGCTGAGCCCCCACAGTGGGCCCAGTGG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTTCTGCGCCCTCCATaGGGGTCTGCCGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEFLRPP*GSAGQH
Trigger: GTGCTGACCGGCAGACCCGCATGGAGGGCGCAGAAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCTGTCCCAGGGCCCTaGTGCACTCCTTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESVPGP*CTPSGL
Trigger: TAGCCCTGAAGGAGTGCATCAGGGCCCTGGGACAGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTGCTTGCGGGAGTTTaGAGCTGCAGGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELLAGV*SCRQLH
Trigger: GTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCCCAGCTCAGACCCTaGCTAGACCCACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESQLRP*LDPPGT
Trigger: GGTACCTGGTGGGTCTAGGCAGGGTCTGAGCTGGGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCCCCCAAGCACCTCTTaGTGGCTGACACGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQPPSTS*WLTRRR
Trigger: CCTCCTCCGTGTCAGCCATCAAGAGGTGCTTGGGGG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACATTCTCCTGAGCCGTaGTGCGAAGCTCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEHSPEP*CEALRQ
Trigger: CTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTGAGACAGTGGACATaGGAGTGGAGCGGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELRQWT*EWSGFE
Trigger: TTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTAACCAGATGCTCCTaGAGCCCCACCACTTGCACC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELTRCS*SPTTCT
Trigger: GGTGCAAGTGGTGGGGCTGCAGGAGCATCTGGTTAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTTCTGCGCCCTCCATaGGGGTCTGCCGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQFLRPP*GSAGQH
Trigger: GTGCTGACCGGCAGACCCGCATGGAGGGCGCAGAAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCCTGCTCTTCCAGCTaGATGGCCAGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQACSSS*MARRKA
Trigger: GGCCTTGCGCCTGGCCATGCAGCTGGAAGAGCAGGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCCACGCAGGCAGGATaGTGCGGAGAAAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESTQAG*CGESSM
Trigger: CATAGAGCTTTCTCCGCAGCATCCTGCCTGCGTGGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCTGCCGGTCAGCACTaGAAGTGTCCGCGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSAGQH*KCPRLA
Trigger: AGCGAGGCGCGGACACTTCCAGTGCTGACCGGCAGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCACTGGGCCCACTGTaGGGGCTCAGCTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQPLGPL*GLSSLT
Trigger: GGTCAAGGAGCTGAGCCCCCACAGTGGGCCCAGTGG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGAAGCGACGAGTCCATaGCCATTCGGAGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEEATSP*PFGESA
Trigger: TGCTGACTCTCCGAATGGCCATGGACTCGTCGCTTC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCACGGAACGGGGTGTaGGCCTTGTTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSRNGV*ALFCPR
Trigger: CCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGAGCTTATGCCTGGTaGGATCGTGGCAATCATGCA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGAYAW*DRGNHA
Trigger: TGCATGATTGCCACGATCTCACCAGGCATAAGCTCC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCGGGAGTTTGCAGCTaGAGGCAGCTCCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQAGVCS*RQLHLH
Trigger: ATGGAGGTGGAGCTGCCTGCAGCTGCAAACTCCCGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTGCTTGCGGGAGTTTaGAGCTGCAGGCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLLAGV*SCRQLH
Trigger: GTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTGCAGCCCCACCACTTaGACCTGTTGCTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQCSPTT*TCCLPS
Trigger: GGACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAACTCTTGTTGATTTCTaGGCCCTCCATGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGETLVDF*ALHAGL
Trigger: CAGACCCGCATGGAGGGCGCAGAAATCAACAAGAGT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCCCAGCTCAGACCCTaGCTAGACCCACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSQLRP*LDPPGT
Trigger: GGTACCTGGTGGGTCTAGGCAGGGTCTGAGCTGGGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCTGCCGGTCAGCACTaGAAGTGTCCGCGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSAGQH*KCPRLA
Trigger: AGCGAGGCGCGGACACTTCCAGTGCTGACCGGCAGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTCCAGGTCATAGTCTaGCTGCTCGGTCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELQVIV*LLGHLR
Trigger: TCTGAGATGACCGAGCAGCCAGACTATGACCTGGAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGCCAGGGAAGAGGCTaGGTGTCAAACCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGQGRG*VSNQTD
Trigger: ATCTGTTTGGTTTGACACCCAGCCTCTTCCCTGGCC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGGGGCAGGAGGAACTaGAAACTGCTTGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGGRRN*KLLAGV
Trigger: AACTCCCGCAAGCAGTTTTCAGTTCCTCCTGCCCCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACCAGTGGCCTTGCTGTaGACCTGTAGACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEPVALL*TCRQLH
Trigger: ATGAAGTTGTCTACAGGTTCACAGCAAGGCCACTGG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTAAGAGACTCTTGTTaGTTTCTGCGCCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELRDSC*FLRPPC
Trigger: GCATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGTTTGCAGAAGAGCTaGCTCGGATGGAATGGACTT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGLQKS*LGWNGL
Trigger: AAGTCCATTCCATCCGAGGCAGCTCTTCTGCAAACC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATGCAGCCCCACCACTTaGACCTGTTGCTTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQCSPTT*TCCLPS
Trigger: GGACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCCTCGCTCATTCCCTaGCAGATCTACCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEASLIP*QIYQRE
Trigger: TTCTCTTTGGTAGATCTGGCAGGGAATGAGCGAGGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAGCCAGTCTGGTCCTTaGTGTATGATCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESQSGP*CMISLS
Trigger: GCTCAAGGAGATCATACAGCAAGGACCAGACTGGCT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGAAGCTCTGAGACAGTaGACATGCGAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQEALRQ*TCEWSG
Trigger: GCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCTGACCATCCTCAATaGTATTTCAGCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEADHPQ*YFSHCR
Trigger: CCTGCAGTGGCTGAAATACCATTGAGGATGGTCAGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCGTCCCGGGAGGCCATaGCATAGATCCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQRPGRP*HRSLWM
Trigger: CATCCAAAGGGATCTATGCCATGGCCTCCCGGGACG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCAGGGGCAAGTTCCTaGCAGCTGCTACCTAACCCT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAGASS*QLLPNP
Trigger: AGGGTTAGGTAGCAGCTGTCAGGAACTTGCCCCTGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCTCCTCCAGCTCCCTaGTCTGAGTCATGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSPPAP*SESWLR
Trigger: ACGAAGCCATGACTCAGATCAGGGAGCTGGAGGAGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGACATCTCGCAGGGCTaGGAAATGCTTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQDISQG*EMLGLL
Trigger: CAGCAAGCCAAGCATTTCTCAGCCCTGCGAGATGTC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTAACCAGATGCTCCTaGAGCCCCACCACTTGCACC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLTRCS*SPTTCT
Trigger: GGTGCAAGTGGTGGGGCTGCAGGAGCATCTGGTTAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCAGAGTTAACCAGATaGTCCTGCAGCCCCACCACT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQAELTR*SCSPTT
Trigger: AGTGGTGGGGCTGCAGGAGCATCTGGTTAACTCTGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGAGTTGGCAAATGTCTaGCCAGAGGTTCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQELANV*PEVLQA
Trigger: CGCCTGCAGAACCTCTGGGCAGACATTTGCCAACTC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTGGTGAGAGTCAAATaGGGGCCCTTTAGGATCTTA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELVRVK*GPFRIL
Trigger: TAAGATCCTAAAGGGCCCCCATTTGACTCTCACCAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGAAGCTCTGAGACAGTaGACATGCGAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQEALRQ*TCEWSG
Trigger: GCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTCATTTCAGAGTTCTaGGCCTTCTTCTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELISEF*AFFSSR
Trigger: GCGAGAAGAGAAGAAGGCCCAGAACTCTGAAATGAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGATTGTCTGTACCAGTaGCCTTGCTGTGAACCTGTA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEDCLYQ*PCCEPV
Trigger: TACAGGTTCACAGCAAGGCCACTGGTACAGACAATC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATGGCATAGATCCCTTTaGATGCATTCTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEWHRSL*MHSGLS
Trigger: GGAAAGCCCAGAATGCATCCAAAGGGATCTATGCCA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACGTCCCGGGAGGCCATaGCATAGATCCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQRPGRP*HRSLWM
Trigger: CATCCAAAGGGATCTATGCCATGGCCTCCCGGGACG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCACCTCTTGATGGCTaGCACGGAGGAGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAPLDG*HGGGNK
Trigger: CTTGTTTCCTCCTCCGTGTCAGCCATCAAGAGGTGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACGTGATGCGAAGCTCTaGGACAGTGGACATGCGAGT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQRDAKL*DSGHAS
Trigger: ACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCCATGTCATTCTCCTaGGCCGTGATGCGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSMSFS*AVMRSS
Trigger: AGAGCTTCGCATCACGGCTCAGGAGAATGACATGGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEVIVSG*HSKVAR
Trigger: TCGGGCTACTTTGGAATGTCATCCACTTACTATGAC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCTTGGCCTTCTTGTTaGGCAGGTCAAACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQAWPSC*AGQTAS
Trigger: GGAAGCTGTTTGACCTGCTCAACAAGAAGGCCAAGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGAGCTTATGCCTGGTaGGATCGTGGCAATCATGCA +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGAYAW*DRGNHA
Trigger: TGCATGATTGCCACGATCTCACCAGGCATAAGCTCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGACATCTCGCAGGGCTaGGAAATGCTTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQDISQG*EMLGLL
Trigger: CAGCAAGCCAAGCATTTCTCAGCCCTGCGAGATGTC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTCTGCCCATTCCACTaGAACACAGGATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEFCPFH*NTGFLQ
Trigger: TTGGAGAAATCCTGTGTTTCAGTGGAATGGGCAGAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTGAGACAGTGGACATaGGAGTGGAGCGGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLRQWT*EWSGFE
Trigger: TTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCAGAGTTAACCAGATaGTCCTGCAGCCCCACCACT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAELTR*SCSPTT
Trigger: AGTGGTGGGGCTGCAGGAGCATCTGGTTAACTCTGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGAGTTGGCAAATGTCTaGCCAGAGGTTCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQELANV*PEVLQA
Trigger: CGCCTGCAGAACCTCTGGGCAGACATTTGCCAACTC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGGAGGAATTGGAGTTaGCAAATGTCTGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGRNWS*QMSAQR
Trigger: CCTCTGGGCAGACATTTGCCAACTCCAATTCCTCCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCTCGAAGAATAATTTaGAAGCACGCGTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQARRII*KHAWER
Trigger: CCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAAATGCTTGGCTTGCTaGGCCAGAGCAGATTCCGCT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQKCLAC*ARADSA
Trigger: AGCGGAATCTGCTCTGGCCCAGCAAGCCAAGCATTT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACAGGAATTTTGGAGTTaGCGGATCTCCGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEQEFWS*RISVFV
Trigger: AACAAAAACGGAGATCCGTCAACTCCAAAATTCCTG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCCATGTCATTCTCCTaGGCCGTGATGCGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSMSFS*AVMRSS
Trigger: AGAGCTTCGCATCACGGCTCAGGAGAATGACATGGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCTTGGCCTTCTTGTTaGGCAGGTCAAACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAWPSC*AGQTAS
Trigger: GGAAGCTGTTTGACCTGCTCAACAAGAAGGCCAAGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACAGACACATATTCTGTaGTCTTCGATAGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEQTHIL*SSIGSV
Trigger: GACTGATCCTATCGAAGAGCACAGAATATGTGTCTG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTCTTGGCCAATTCTTaGTTATTCAGTGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEFLANS*LFSGRF
Trigger: GAAACGCCCACTGAATAAGCAAGAATTGGCCAAGAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTGTACCAGTGGCCTTaGTGTGAACCTGTAGACAAC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLYQWP*CEPVDN
Trigger: GTTGTCTACAGGTTCACAGCAAGGCCACTGGTACAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCCTGTCTGGCCATATaGAAAACAAGTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESCLAI*KTSCFS
Trigger: GGAAAAGCAACTTGTTTTGCATATGGCCAGACAGGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAAAGAGAACTTGCCATaGATTCTCCCTTTAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEKENLP*ILPLAR
Trigger: TCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAACTCTTGTTGATTTCTaGGCCCTCCATGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQTLVDF*ALHAGL
Trigger: CAGACCCGCATGGAGGGCGCAGAAATCAACAAGAGT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGCCAGTCTGGTCCTTaGTGTATGATCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSQSGP*CMISLS
Trigger: GCTCAAGGAGATCATACAGCAAGGACCAGACTGGCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAAACAGATTTTTATTTaGAGTCGTCACTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEKQIFI*SRHWGR
Trigger: ACGGCCCCAGTGACGACTGCAAATAAAAATCTGTTT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACAAAATCAATCTCTTTaGCCTTTGTGGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGEQNQSL*PLWHLL
Trigger: AAGGAGGTGCCACAAAGGGCAAAGAGATTGATTTTG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACAGTGGACATGCGAGTaGAGCGGCTTCGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQQWTCE*SGFEDF
Trigger: AAAGTCTTCGAAGCCGCTCCACTCGCATGTCCACTG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTGCCTCGGATGGAATaGACTTGCTCTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLPRME*TCSSIS
Trigger: GGAGATGGAAGAGCAAGTCCATTCCATCCGAGGCAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAGTCCACTTTCAACTTaGGTTCATGTACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGESPLST*VHVPRG
Trigger: TCCTCTTGGTACATGAACCCAAGTTGAAAGTGGACT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTGCCACTTCCTGTCTaGCCATATGCAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELPLPV*PYAKQV
Trigger: AACTTGTTTTGCATATGGCCAGACAGGAAGTGGCAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCCTTTGGATGCATTCTaGGCTTTCCCAGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQPLDAF*AFPERS
Trigger: AGACCTCTCTGGGAAAGCCCAGAATGCATCCAAAGG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCTCGAAGAATAATTTaGAAGCACGCGTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQARRII*KHAWER
Trigger: CCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGAGCTCAAGCCAGTCTaGTCCTTGCTGTATGATCTC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQELKPV*SLLYDL
Trigger: GAGATCATACAGCAAGGACCAGACTGGCTTGAGCTC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTCCAGGTCATAGTCTaGCTGCTCGGTCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLQVIV*LLGHLR
Trigger: TCTGAGATGACCGAGCAGCCAGACTATGACCTGGAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGATTTGCAGTCGTCACTaGGGCCGTTTCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQICSRH*GRFLLL
Trigger: AAGCAGCAAGAAACGGCCCCAGTGACGACTGCAAAT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGGCCAGGGAAGAGGCTaGGTGTCAAACCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQGQGRG*VSNQTD
Trigger: ATCTGTTTGGTTTGACACCCAGCCTCTTCCCTGGCC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTTCCATCTCCTCGCTaGCCATCCTCAATGGTATTT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLPSPR*PSSMVF
Trigger: AAATACCATTGAGGATGGTCAGCGAGGAGATGGAAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCAGTGGCCTTGCTGTaGACCTGTAGACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQPVALL*TCRQLH
Trigger: ATGAAGTTGTCTACAGGTTCACAGCAAGGCCACTGG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTAAGAGACTCTTGTTaGTTTCTGCGCCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLRDSC*FLRPPC
Trigger: GCATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCCAGCTCCCTGATCTaGGTCATGGCTTCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSSSLI*VMASLK
Trigger: CTTTAACGAAGCCATGACTCAGATCAGGGAGCTGGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGGAGGAACTGAAAACTaGTTGCGGGAGTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQGGTEN*LREFAA
Trigger: AGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCCTCC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTGTACCAGTGGCCTTaGTGTGAACCTGTAGACAAC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLYQWP*CEPVDN
Trigger: GTTGTCTACAGGTTCACAGCAAGGCCACTGGTACAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCCTCGCTCATTCCCTaGCAGATCTACCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQASLIP*QIYQRE
Trigger: TTCTCTTTGGTAGATCTGGCAGGGAATGAGCGAGGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGATTCACAGGAGCTTATaGCTGGTGAGATCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQIHRSL*LVRSWQ
Trigger: TTGCCACGATCTCACCAGGCATAAGCTCCTGTGAAT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCTGACCATCCTCAATaGTATTTCAGCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQADHPQ*YFSHCR
Trigger: CCTGCAGTGGCTGAAATACCATTGAGGATGGTCAGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAAGAGCTGCCTCGGATaGAATGGACTTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQKSCLG*NGLALP
Trigger: TGGAAGAGCAAGTCCATTCCATCCGAGGCAGCTCTT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCTTTGGATGCATTCTaGGCTTTCCCAGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQPLDAF*AFPERS
Trigger: AGACCTCTCTGGGAAAGCCCAGAATGCATCCAAAGG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGAGCTCAAGCCAGTCTaGTCCTTGCTGTATGATCTC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQELKPV*SLLYDL
Trigger: GAGATCATACAGCAAGGACCAGACTGGCTTGAGCTC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAATTTGCAGTCGTCACTaGGGCCGTTTCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQICSRH*GRFLLL
Trigger: AAGCAGCAAGAAACGGCCCCAGTGACGACTGCAAAT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTTCCATCTCCTCGCTaGCCATCCTCAATGGTATTT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLPSPR*PSSMVF
Trigger: AAATACCATTGAGGATGGTCAGCGAGGAGATGGAAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQVIVSG*HSKVAR
Trigger: TCGGGCTACTTTGGAATGTCATCCACTTACTATGAC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCAAGTTCCTGACAGCTaGTACCTAACCCTAAGACTA +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQQVPDS*YLTLRL
Trigger: TAGTCTTAGGGTTAGGTAGCAGCTGTCAGGAACTTG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR CCA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTCCGTTTTTGTTTCTaGATTGTTACATTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRELSISSQSTQAGCCGELRFCF*IVTFSC
Trigger: GCAGGAAAATGTAACAATCCAGAAACAAAAACGGAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTCATTTCAGAGTTCTaGGCCTTCTTCTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLISEF*AFFSSR
Trigger: GCGAGAAGAGAAGAAGGCCCAGAACTCTGAAATGAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGATTGTCTGTACCAGTaGCCTTGCTGTGAACCTGTA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQDCLYQ*PCCEPV
Trigger: TACAGGTTCACAGCAAGGCCACTGGTACAGACAATC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATGGCATAGATCCCTTTaGATGCATTCTGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQWHRSL*MHSGLS
Trigger: GGAAAGCCCAGAATGCATCCAAAGGGATCTATGCCA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCAGACACATATTCTGTaGTCTTCGATAGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQQTHIL*SSIGSV
Trigger: GACTGATCCTATCGAAGAGCACAGAATATGTGTCTG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTCTTGGCCAATTCTTaGTTATTCAGTGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQFLANS*LFSGRF
Trigger: GAAACGCCCACTGAATAAGCAAGAATTGGCCAAGAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCCTGTCTGGCCATATaGAAAACAAGTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSCLAI*KTSCFS
Trigger: GGAAAAGCAACTTGTTTTGCATATGGCCAGACAGGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGTTCCTCCTCTTCCTTaGATAAATTGCCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQVPPLP*INCLES
Trigger: TGATTCCAGGCAATTTATCCAAGGAAGAGGAGGAAC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAAACCATTACTGCGTTaGATCTTGATAGCGAGACCG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQKPLLR*ILIARP
Trigger: CGGTCTCGCTATCAAGATCCAACGCAGTAATGGTTT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTACTGTCATACTCCTaGGCTCTCTTCATTCTCATT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLLSYS*ALFILI
Trigger: AATGAGAATGAAGAGAGCTCAGGAGTATGACAGTAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCTTCTGTTTCCATTTaGATCAACTGCTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSSVSI*INCSPL
Trigger: CAGTGGAGAGCAGTTGATTCAAATGGAAACAGAAGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR TCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTTACATTGGCACTGTaGATTAAACCATTACTGCGT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLTLAL*IKPLLR
Trigger: ACGCAGTAATGGTTTAATTCACAGTGCCAATGTAAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGATTGTTACATTTTCCTaGAAGGGCAGATTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQIVTFS*KGRLSF
Trigger: GAAGGACAATCTGCCCTTGCAGGAAAATGTAACAAT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGCAAATTCCCAGTTTaGAAAACTACTGTCATACTC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGKFPV*KTTVIL
Trigger: GAGTATGACAGTAGTTTTCCAAACTGGGAATTTGCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATTGCCACTTCCTGTCTaGCCATATGCAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLPLPV*PYAKQV
Trigger: AACTTGTTTTGCATATGGCCAGACAGGAAGTGGCAA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGTTCCTCCTCTTCCTTaGATAAATTGCCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQVPPLP*INCLES
Trigger: TGATTCCAGGCAATTTATCCAAGGAAGAGGAGGAAC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAAAGTCAAAGCAGAATaGTTGGTTCTCCAGATACTT +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQKVKAE*LVLQIL
Trigger: AAGTATCTGGAGAACCAAGCATTCTGCTTTGACTTT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGCTGTTTCATCAAATaGAAAGTCAAAGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSCFIK*KVKAEC
Trigger: GCATTCTGCTTTGACTTTGCATTTGATGAAACAGCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR GCA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAGCTGTTTCATCAAATaGAAAGTCAAAGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSCFIK*KVKAEC
Trigger: GCATTCTGCTTTGACTTTGCATTTGATGAAACAGCT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAACTTGCACCTGTTGCTaGCCGTCCTCCAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGETCTCC*PSSSTR
Trigger: GCGCGTGCTGGAGGACGGCAAGCAACAGGTGCAAGT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTGCAGCCCCACCACTaGCACCTGTTGCTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGELQPHH*HLLLAV
Trigger: GACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCCAGGCGCAAGGCCTaGATGACATCTCGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEARRKA*MTSRRA
Trigger: AGCCCTGCGAGATGTCATCAAGGCCTTGCGCCTGGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCAGATCTAGGCCACTaGGCTCCCCTGCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEADLGH*APLLIC
Trigger: GCAGATCAGCAGGGGAGCCAAGTGGCCTAGATCTGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372217.5
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAGCACCTGTGTCAGCTaGCTCTCACGGAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGESTCVS*LSRNGV
Trigger: CACCCCGTTCCGTGAGAGCAAGCTGACACAGGTGCT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATGGGGGCTCAGCTCCTaGACCCTGTCTGCATATCTC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEWGLSS*TLSAYL
Trigger: GAGATATGCAGACAGGGTCAAGGAGCTGAGCCCCCA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTGCAGCCCCACCACTaGCACCTGTTGCTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLQPHH*HLLLAV
Trigger: GACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCCAGGCGCAAGGCCTaGATGACATCTCGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQARRKA*MTSRRA
Trigger: AGCCCTGCGAGATGTCATCAAGGCCTTGCGCCTGGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp TTGCAGCTGCAGGCAGCTCCACCTCCATGTCATTCTCCTGAGCCGTaGTGCGAAGCTCTGAGACAGTGGACATGCGAGTGGAGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: LQLQAAPPPCHSPEP*CEALRQWTCEWSGF
Trigger: GAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATGACATGGAGGTGGAGCTGCCTGCAGCTGCAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5
ENST00000480574.1
ENST00000493027.5
CDS TCA 90 bp CGGGAGTTTGCAGCTGCAGGCAGCTCCACCTCCATGTCATTCTCCTaGGCCGTGATGCGAAGCTCTGAGACAGTGGACATGCGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: REFAAAGSSTSMSFS*AVMRSSETVDMRVE
Trigger: CTCCACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATGACATGGAGGTGGAGCTGCCTGCAGCTGCAAACTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5
ENST00000480574.1
ENST00000493027.5
CDS TCA 90 bp TTGGTACTCACCAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTTaGGGCTCCAAGGGGATGGAATGGCAACCTTGCCTTCAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LVLTRGMWHRPGFEA*GSKGMEWQPCLQPR
Trigger: CCTTGGCTGAAGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGGTGAGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS GCA 90 bp GAGCGGCTTCGAAGACCTGGAGAACCGAGAGCAGTAGCCAGTCAGTaGTGCACGATCTCGAGGGTGGTCAGGGGCAAACCTCCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: ERLRRPGEPRAVASQ*CTISRVVRGKPPSF
Trigger: GAAACTTGGAGGTTTGCCCCTGACCACCCTCGAGATCGTGCAGCACTGACTGGCTACTGCTCTCGGTTCTCCAGGTCTTCGAAGCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCCTGCAAGGGCAGATaGTCCTTCGGATGTAAGGGA +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGESCKGR*SFGCKG
Trigger: TCCCTTACATCCGAAGGACAATCTGCCCTTGCAGGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGAACTGAAAACTGCTaGCGGGAGTTTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGTENC*REFAAA
Trigger: TGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACCCATAGTATGTGTCTaGCCACTTCCTGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEPIVCV*PLPVWP
Trigger: TGGCCAGACAGGAAGTGGCAAGACACATACTATGGG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACTTCCGGTAGCAGGGTaGATTCTTCAGGAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGELPVAG*ILQEED
Trigger: GTCTTCCTCCTGAAGAATCAACCCTGCTACCGGAAG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAGCTCGAAGAATAATTaGGAAGCACGCGTGGGAGCG +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGESSKNN*EARVGA
Trigger: CGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGCT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGCACCTGTGTCAGCTaGCTCTCACGGAACGGGGTG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSTCVS*LSRNGV
Trigger: CACCCCGTTCCGTGAGAGCAAGCTGACACAGGTGCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATCTTCCTTGGATAAATaGCCTGGAATCAGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGESSLDK*PGISAP
Trigger: CGGGGCGCTGATTCCAGGCAATTTATCCAAGGAAGA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp CAGCTCCACCTCCATGTCATTCTCCTGAGCCGTGATGCGAAGCTCTaGGACAGTGGACATGCGAGTGGAGCGGCTTCGAAGACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: QLHLHVILLSRDAKL*DSGHASGAASKTWR
Trigger: TCTCCAGGTCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATGACATGGAGGTGGAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS GCA 90 bp CGGCTTCGAAGACCTGGAGAACCGAGAGCAGTAGCCAGTCAGTGCTaGACGATCTCGAGGGTGGTCAGGGGCAAACCTCCAAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: RLRRPGEPRAVASQC*TISRVVRGKPPSFC
Trigger: ACAGAAACTTGGAGGTTTGCCCCTGACCACCCTCGAGATCGTGCAGCACTGACTGGCTACTGCTCTCGGTTCTCCAGGTCTTCGAAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACACCACTTGCACCTGTaGCTTGCCGTCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQHHLHL*LAVLQH
Trigger: GTGCTGGAGGACGGCAAGCAACAGGTGCAAGTGGTG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTGGGGGCTCAGCTCCTaGACCCTGTCTGCATATCTC +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQWGLSS*TLSAYL
Trigger: GAGATATGCAGACAGGGTCAAGGAGCTGAGCCCCCA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp TTACTGCGTTGGATCTTGATAGCGAGACCGGGAAACAGGCGGGCCTaGAGCGACGAGTCCATGGCCATTCGGAGAGTCAGCAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LLRWILIARPGNRRA*SDESMAIRRVSKEE
Trigger: CTCTTCCTTGCTGACTCTCCGAATGGCCATGGACTCGTCGCTTCAGGCCCGCCTGTTTCCCGGTCTCGCTATCAAGATCCAACGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372224.9
ENST00000452259.5
ENST00000493027.5
CDS GCA 90 bp CAGGAGGAAGACGTCCCGGGAGGCCATGGCATAGATCCCTTTGGATaGATTCTGGGCTTTCCCAGAGAGGTCTCCGCCCATAGTATGTGT +
Preference number: 5 (lower is better)
Translates to: QEEDVPGGHGIDPFG*ILGFPREVSAHSMC
Trigger: ACACATACTATGGGCGGAGACCTCTCTGGGAAAGCCCAGAATGCATCCAAAGGGATCTATGCCATGGCCTCCCGGGACGTCTTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAACCCATGTCGATCATCTaGATGACATCATCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEPMSII*MTSSAE
Trigger: CTCTGCTGATGATGTCATCAAGATGATCGACATGGG...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATGCTGTATGATCTCCTaGAGCTCTTCCATAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGECCMIS*SSSIAF
Trigger: GAAGGCTATGGAAGAGCTCAAGGAGATCATACAGCA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp TCCTTGGATAACAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTTaGGGCTCCAAGGGGATGGAATGGCAACCTTGCCTGTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: SLDNRGMWHRPGFEA*GSKGMEWQPCLSAY
Trigger: ATATGCAGACAGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGTTATCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423289.1
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCCTGCAAGGGCAGATaGTCCTTCGGATGTAAGGGA +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSCKGR*SFGCKG
Trigger: TCCCTTACATCCGAAGGACAATCTGCCCTTGCAGGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGCAGGAATTTTGGAGTaGACGGATCTCCGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEAGILE*TDLRFC
Trigger: ACAAAAACGGAGATCCGTCAACTCCAAAATTCCTGC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAAGTCCACTTTCAACTaGGGTTCATGTACCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEKSTFN*GSCTKR
Trigger: CCTCTTGGTACATGAACCCAAGTTGAAAGTGGACTT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCCCATAGTATGTGTCTaGCCACTTCCTGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQPIVCV*PLPVWP
Trigger: TGGCCAGACAGGAAGTGGCAAGACACATACTATGGG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACGGGAGGAATTGGAGTaGGCAAATGTCTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQREELE*ANVCPE
Trigger: CTCTGGGCAGACATTTGCCAACTCCAATTCCTCCCG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGGGCTAAGAGACTCTaGTTGATTTCTGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQRAKRL*LISAPS
Trigger: GGAGGGCGCAGAAATCAACAAGAGTCTCTTAGCCCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCTTCCTTGGATAAATaGCCTGGAATCAGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSSLDK*PGISAP
Trigger: CGGGGCGCTGATTCCAGGCAATTTATCCAAGGAAGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAAGTTCCTCCTCTTCCTaGGATAAATTGCCTGGAATC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGESSSSS*DKLPGI
Trigger: GATTCCAGGCAATTTATCCAAGGAAGAGGAGGAACT...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTTCTTGCTGCTTATTaGTCTGCTAGCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEFLAAY*SASLLF
Trigger: GAAGAGCAGGCTAGCAGACAAATAAGCAGCAAGAAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp CAGCTCCACCTCCATGTCATTCTCCTGAGCCGTGATGCGAAGCTCTaGGACAGTGGACATGCGAGTGGAGCGGCTTCGAAGACTTTCTTT +
Preference number: 5 (lower is better)
Translates to: QLHLHVILLSRDAKL*DSGHASGAASKTFF
Trigger: AAAGAAAGTCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATGACATGGAGGTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5
ENST00000493027.5
CDS TCA 90 bp ATCTCGAGGGTGGTCAGGGGCAAACCTCCAAGTTTCTGTACAAGGTaGAATAGGTCCCAGCTACCAGGAAAGGGGCTCGCCAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: ISRVVRGKPPSFCTR*NRSQLPGKGLANFP
Trigger: TGGGAAGTTGGCGAGCCCCTTTCCTGGTAGCTGGGACCTATTTCACCTTGTACAGAAACTTGGAGGTTTGCCCCTGACCACCCTCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS GCA 90 bp TCGATCATCTTGATGACATCATCAGCAGAGTTAACCAGATGCTCCTaGAGCCCCACCACTTGCACCTGTTGCTTGCCGTCCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: SIILMTSSAELTRCS*SPTTCTCCLPSSST
Trigger: CGTGCTGGAGGACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCAGGAGCATCTGGTTAACTCTGCTGATGATGTCATCAAGATGATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGGAACTGAAAACTGCTaGCGGGAGTTTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQGTENC*REFAAA
Trigger: TGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCGGATGGAATGGACTaGCTCTTCCATCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSDGMD*LFHLLA
Trigger: AGCGAGGAGATGGAAGAGCAAGTCCATTCCATCCGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGGCAAATTCCCAGTTaGGAAAACTACTGTCATACT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGQIPS*ENYCHT
Trigger: AGTATGACAGTAGTTTTCCAAACTGGGAATTTGCCC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAATTTCTTGGCCAATTCTaGCTTATTCAGTGGGCGTTT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEFLGQF*LIQWAF
Trigger: AAACGCCCACTGAATAAGCAAGAATTGGCCAAGAAA...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGTCAAAGCAGAATGCTaGGTTCTCCAGATACTTTGT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEVKAEC*VLQILC
Trigger: ACAAAGTATCTGGAGAACCAAGCATTCTGCTTTGAC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGCTTGGCCTTCTTGTaGAGCAGGTCAAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSLAFL*SRSNSF
Trigger: GAAGCTGTTTGACCTGCTCAACAAGAAGGCCAAGCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGCTAAGAGACTCTTGTaGATTTCTGCGCCCTCCATG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQAKRLL*ISAPSM
Trigger: CATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAGC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAGGGCTAAGAGACTCTaGTTGATTTCTGCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQRAKRL*LISAPS
Trigger: GGAGGGCGCAGAAATCAACAAGAGTCTCTTAGCCCT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAAGCCAGTCTGGTCCTaGCTGTATGATCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQKPVWS*LYDLLE
Trigger: CTCAAGGAGATCATACAGCAAGGACCAGACTGGCTT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGAGCAGATTCCGCTTaGTTCACAAAGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQRADSA*FTKVSR
Trigger: CCTGGAGACCTTTGTGAACAAAGCGGAATCTGCTCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTACTGCGTTGGATCTaGATAGCGAGACCGGGAAAC +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLLRWI*IARPGN
Trigger: GTTTCCCGGTCTCGCTATCAAGATCCAACGCAGTAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS CCA 90 bp CAGAGCAGATTCCGCTTTGTTCACAAAGGTCTCCAGGTCATAGTCTaGCTGCTCGGTCATCTCAGAGAGCTCAAGCCAGTCTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QSRFRFVHKGLQVIV*LLGHLRELKPVWSL
Trigger: CAAGGACCAGACTGGCTTGAGCTCTCTGAGATGACCGAGCAGCCAGACTATGACCTGGAGACCTTTGTGAACAAAGCGGAATCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTTGGAGCAGGAATTTaGGAGTTGACGGATCTCCGT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQFGAGI*ELTDLR
Trigger: ACGGAGATCCGTCAACTCCAAAATTCCTGCTCCAAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CCCAGGGAGCTCTCCATTAGCAGCCAGTCCACGCAGGCAGGATGCTGCGGAGAAGGTTCTCCAGATACTTaGTTAAGTCCACTTTCAACT +
Preference number: 5 (lower is better)
Translates to: PRELSISSQSTQAGCCGEGSPDT*LSPLST
Trigger: AGTTGAAAGTGGACTTAACAAAGTATCTGGAGAACC...TTCTCCGCAGCATCCTGCCTGCGTGGACTGGCTGCTAATGGAGAGCTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTCCACCTTCAAAGATaGTCTGTACCAGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQFHLQR*SVPVAL
Trigger: CAAGGCCACTGGTACAGACAATCTTTGAAGGTGGAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCCCATGTCGATCATCTaGATGACATCATCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQPMSII*MTSSAE
Trigger: CTCTGCTGATGATGTCATCAAGATGATCGACATGGG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCTAAGAGACTCTTGTaGATTTCTGCGCCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAKRLL*ISAPSM
Trigger: CATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAAGCCAGTCTGGTCCTaGCTGTATGATCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQKPVWS*LYDLLE
Trigger: CTCAAGGAGATCATACAGCAAGGACCAGACTGGCTT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTGAGAACATTCCCCTaGATGGAAAGAAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLRTFP*MERRAT
Trigger: TGTTGCCCTTCTTTCCATCAAGGGGAATGTTCTCAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATTTGGAGCAGGAATTTaGGAGTTGACGGATCTCCGT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQFGAGI*ELTDLR
Trigger: ACGGAGATCCGTCAACTCCAAAATTCCTGCTCCAAA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAAGTCCACTTTCAACTaGGGTTCATGTACCAAGAGG +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQKSTFN*GSCTKR
Trigger: CCTCTTGGTACATGAACCCAAGTTGAAAGTGGACTT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATGCTGTATGATCTCCTaGAGCTCTTCCATAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQCCMIS*SSSIAF
Trigger: GAAGGCTATGGAAGAGCTCAAGGAGATCATACAGCA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTGAGAACATTCCCCTaGATGGAAAGAAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLRTFP*MERRAT
Trigger: TGTTGCCCTTCTTTCCATCAAGGGGAATGTTCTCAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCAAAATCAATCTCTTaGCCCTTTGTGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSKSIS*PFVAPP
Trigger: AGGAGGTGCCACAAAGGGCAAAGAGATTGATTTTGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372224.9
CDS GCA 90 bp GCGCCTCGCTCATTCCCTGCCAGATCTACCAAAGAGAACTTGCCATaGATTCTCCCTTTAGCTCGAAGAATAATTTGGAAGCACGCGTGG +
Preference number: 5 (lower is better)
Translates to: APRSFPARSTKENLP*ILPLARRIIWKHAW
Trigger: CCACGCGTGCTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGATCTGGCAGGGAATGAGCGAGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 90 bp CGAACTGAGTTCACAGGGTTTGCAGAAGAGCTGCCTCGGATGGAATaGACTTGCTCTTCCATCTCCTCGCTGACCATCCTCAATGGTATT +
Preference number: 5 (lower is better)
Translates to: RTEFTGFAEELPRME*TCSSISSLTILNGI
Trigger: AATACCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGTCCATTCCATCCGAGGCAGCTCTTCTGCAAACCCTGTGAACTCAGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
CDS CCA 90 bp CCATGCATTCTCCCTTTAGCTCGAAGAATAATTTGGAAGCACGCGTaGGAGCGGGAGGAATTGGAGTTGGCAAATGTCTGCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: PCILPLARRIIWKHA*EREELELANVCPEV
Trigger: AACCTCTGGGCAGACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGCAGGAATTTTGGAGTaGACGGATCTCCGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQAGILE*TDLRFC
Trigger: ACAAAAACGGAGATCCGTCAACTCCAAAATTCCTGC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGGCAAATTCCCAGTTaGGAAAACTACTGTCATACT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGQIPS*ENYCHT
Trigger: AGTATGACAGTAGTTTTCCAAACTGGGAATTTGCCC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTTTCTTGGCCAATTCTaGCTTATTCAGTGGGCGTTT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQFLGQF*LIQWAF
Trigger: AAACGCCCACTGAATAAGCAAGAATTGGCCAAGAAA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAACCAAGAGGAGACACTaGCTAGGAATGGAAATCACA +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQTKRRH*LGMEIT
Trigger: TGTGATTTCCATTCCTAGCAAGTGTCTCCTCTTGGT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGTCTACCAAAGAGAACTaGCCATGCATTCTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQSTKEN*PCILPL
Trigger: TAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGA...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGCTCTTCTGTTTCCATTaGAATCAACTGCTCTCCACT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQLFCFH*NQLLST
Trigger: AGTGGAGAGCAGTTGATTCAAATGGAAACAGAAGAG...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAAGTTCCTCCTCTTCCTaGGATAAATTGCCTGGAATC +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSSSSS*DKLPGI
Trigger: GATTCCAGGCAATTTATCCAAGGAAGAGGAGGAACT...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATTTCTTGCTGCTTATTaGTCTGCTAGCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQFLAAY*SASLLF
Trigger: GAAGAGCAGGCTAGCAGACAAATAAGCAGCAAGAAA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGAGAGTTCTGGGTTTATaGCAGCCACATCATCAAAAT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQRVLGL*QPHHQN
Trigger: ATTTTGATGATGTGGCTGCAATAAACCCAGAACTCT...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGACGGATCTCCGTTTTaGTTTCTGGATTGTTACATT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQDGSPF*FLDCYI
Trigger: AATGTAACAATCCAGAAACAAAAACGGAGATCCGTC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp CAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACCCCAGGGTTCTCCAGATACTTaGTTAAGTCCACTTTCAACT +
Preference number: 5 (lower is better)
Translates to: QIAVLKAPSLSPEPGQPQGSPDT*LSPLST
Trigger: AGTTGAAAGTGGACTTAACAAAGTATCTGGAGAACC...CTGGGGTTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGTCAAAGCAGAATGCTaGGTTCTCCAGATACTTTGT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQVKAEC*VLQILC
Trigger: ACAAAGTATCTGGAGAACCAAGCATTCTGCTTTGAC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAATCTACCAAAGAGAACTaGCCATGCATTCTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQSTKEN*PCILPL
Trigger: TAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGA...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAACTCTTCTGTTTCCATTaGAATCAACTGCTCTCCACT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQLFCFH*NQLLST
Trigger: AGTGGAGAGCAGTTGATTCAAATGGAAACAGAAGAG...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGACGGATCTCCGTTTTaGTTTCTGGATTGTTACATT +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQDGSPF*FLDCYI
Trigger: AATGTAACAATCCAGAAACAAAAACGGAGATCCGTC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS-3UTR CAA 90 bp AGCCAGCAGATAGCTGTACTAAAGGCTCCGTCTCTCTCCCCAGAGCCAGGACAAGTTTTTGTTTCTGGATaGTTACATTTTCCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: SQQIAVLKAPSLSPEPGQVFVSG*LHFPAR
Trigger: CCTTGCAGGAAAATGTAACAATCCAGAAACAAAAAC...TTGTCCTGGCTCTGGGGAGAGAGACGGAGCCTTTAGTACAGCTATCTGCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 90 bp GAGAGTATTTCAGGGGGTGCTCCAGGATCAGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGAAATTCTTTAATCATTCGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: ESISGGAPGSVIVSG*HSKVARNSLIIRAN
Trigger: ATTTGCCCGAATGATTAAAGAATTTCGGGCTACTTTGGAATGTCATCCACTTACTATGACTGATCCTGGAGCACCCCCTGAAATACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493027.5
CDS TCA 90 bp ACACATATTCTGTGCTCTTCGATAGGATCAGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGAAATTCTTTAATCATTCGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: THILCSSIGSVIVSG*HSKVARNSLIIRAN
Trigger: ATTTGCCCGAATGATTAAAGAATTTCGGGCTACTTTGGAATGTCATCCACTTACTATGACTGATCCTATCGAAGAGCACAGAATATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5
CDS CCA 72 bp TTTCTGCGCCCTCCATGCGGGTCTGCCGGTCAGCACTaGAAGTGTCCGCGCCTCGCTCATTCCCTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: FLRPPCGSAGQH*KCPRLAHSLPD
Trigger: ATCTGGCAGGGAATGAGCGAGGCGCGGACACTTCCAGTGCTGACCGGCAGACCCGCATGGAGGGCGCAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp GACCGGGAAACAGGCGGGCCTGAAGCGACGAGTCCATaGCCATTCGGAGAGTCAGCAAGGAAGAGAAACGCG +
Preference number: 6 (lower is better)
Translates to: DRETGGPEATSP*PFGESARKRNA
Trigger: CGCGTTTCTCTTCCTTGCTGACTCTCCGAATGGCCATGGACTCGTCGCTTCAGGCCCGCCTGTTTCCCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372224.9
ENST00000452259.5
ENST00000493027.5
CDS CAA 72 bp GAAGGCCTAGTGGGGGCAGGAGGAACTGAAAACTGCTaGCGGGAGTTTGCAGCTGCAGGCAGCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: EGLVGAGGTENC*REFAAAGSSTS
Trigger: GGAGGTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCCTCCTGCCCCCACTAGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
ENST00000480574.1
CDS CAA 72 bp CACCAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTaGAGGCTCCAAGGGGATGGAATGGCAACCTTGCCT +
Preference number: 6 (lower is better)
Translates to: HQRNVAPPRLRG*RLQGDGMATLP
Trigger: AGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS TCA 72 bp TGGATCTTGATAGCGAGACCGGGAAACAGGCGGGCCTaGAGCGACGAGTCCATGGCCATTCGGAGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: WILIARPGNRRA*SDESMAIRRVS
Trigger: GCTGACTCTCCGAATGGCCATGGACTCGTCGCTTCAGGCCCGCCTGTTTCCCGGTCTCGCTATCAAGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372224.9
ENST00000452259.5
ENST00000493027.5
CDS TCA 72 bp AACAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTTaGGGCTCCAAGGGGATGGAATGGCAACCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: NRGMWHRPGFEA*GSKGMEWQPCL
Trigger: CAGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423289.1
CDS TCA 72 bp ACCAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTTaGGGCTCCAAGGGGATGGAATGGCAACCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: TRGMWHRPGFEA*GSKGMEWQPCL
Trigger: AAGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS GCA 72 bp AGACCTGGAGAACCGAGAGCAGTAGCCAGTCAGTGCTaGACGATCTCGAGGGTGGTCAGGGGCAAACCTCCA +
Preference number: 6 (lower is better)
Translates to: RPGEPRAVASQC*TISRVVRGKPP
Trigger: TGGAGGTTTGCCCCTGACCACCCTCGAGATCGTGCAGCACTGACTGGCTACTGCTCTCGGTTCTCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS GCA 72 bp CGAAGACCTGGAGAACCGAGAGCAGTAGCCAGTCAGTaGTGCACGATCTCGAGGGTGGTCAGGGGCAAACCT +
Preference number: 6 (lower is better)
Translates to: RRPGEPRAVASQ*CTISRVVRGKP
Trigger: AGGTTTGCCCCTGACCACCCTCGAGATCGTGCAGCACTGACTGGCTACTGCTCTCGGTTCTCCAGGTCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS CCA 72 bp GGAAGACGTCCCGGGAGGCCATGGCATAGATCCCTTTaGATGCATTCTGGGCTTTCCCAGAGAGGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: GRRPGRPWHRSL*MHSGLSQRGLR
Trigger: GCGGAGACCTCTCTGGGAAAGCCCAGAATGCATCCAAAGGGATCTATGCCATGGCCTCCCGGGACGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp TTTGGAAGCACGCGTGGGAGCGGGAGGAATTGGAGTTaGCAAATGTCTGCCCAGAGGTTCTGCAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: FGSTRGSGRNWS*QMSAQRFCRRC
Trigger: GCAGCGCCTGCAGAACCTCTGGGCAGACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp GACAGTGGACATGCGAGTGGAGCGGCTTCGAAGACCTaGAGAACCGAGAGCAGTAGCCAGTCAGTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: DSGHASGAASKT*RTESSSQSVLH
Trigger: GTGCAGCACTGACTGGCTACTGCTCTCGGTTCTCCAGGTCTTCGAAGCCGCTCCACTCGCATGTCCACTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480574.1
CDS CAA 72 bp CAAACAGTCGGGTACTCCACAGCAGATCTAGGCCACTaGGCTCCCCTGCTGATCTGCTGGGCAGTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: QTVGYSTADLGH*APLLICWAVRS
Trigger: GGACCTCACTGCCCAGCAGATCAGCAGGGGAGCCAAGTGGCCTAGATCTGCTGTGGAGTACCCGACTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000480574.1
CDS CAA 72 bp AGGGCCCTGATGCACTCCTTCAGGGCTAAGAGACTCTaGTTGATTTCTGCGCCCTCCATGCGGGTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RALMHSFRAKRL*LISAPSMRVCR
Trigger: CCGGCAGACCCGCATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAGCCCTGAAGGAGTGCATCAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 72 bp CTTGACCTAGGGACCCCGCTCCTCACCATTACTGCGTaGGATCTTGATAGCGAGACCGGGAAACAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: LDLGTPLLTITA*DLDSETGKQAG
Trigger: GCCCGCCTGTTTCCCGGTCTCGCTATCAAGATCCAACGCAGTAATGGTGAGGAGCGGGGTCCCTAGGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455186.5
CDS CAA 72 bp AGGAAACAAGGAGGTCTCAGATCCCACAGCACCCCCTaGGTACTCACCAGAGGAATGTGGCACCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RKQGGLRSHSTP*VLTRGMWHRPG
Trigger: GCCTGGGCGGTGCCACATTCCTCTGGTGAGTACCAAGGGGGTGCTGTGGGATCTGAGACCTCCTTGTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS CAA 90 bp CTTGGTACTCACCAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCTaGAGGCTCCAAGGGGATGGAATGGCAACCTTGCCTTCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: LGTHQRNVAPPRLRG*RLQGDGMATLPSAK
Trigger: CTTGGCTGAAGGCAAGGTTGCCATTCCATCCCCTTGGAGCCTCAAGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGGTGAGTACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS CAA 90 bp TTGACCCTGAGGAAACAAGGAGGTCTCAGATCCCACAGCACCCCCTaGGTACTCACCAGAGGAATGTGGCACCGCCCAGGCTTCGAGGCT +
Preference number: 6 (lower is better)
Translates to: LTLRKQGGLRSHSTP*VLTRGMWHRPGFEA
Trigger: AGCCTCGAAGCCTGGGCGGTGCCACATTCCTCTGGTGAGTACCAAGGGGGTGCTGTGGGATCTGAGACCTCCTTGTTTCCTCAGGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472235.1
CDS CAA 72 bp GCCCTGATGCACTCCTTCAGGGCTAAGAGACTCTTGTaGATTTCTGCGCCCTCCATGCGGGTCTGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: ALMHSFRAKRLL*ISAPSMRVCRS
Trigger: TGACCGGCAGACCCGCATGGAGGGCGCAGAAATCAACAAGAGTCTCTTAGCCCTGAAGGAGTGCATCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 72 bp CTCCATGTCATTCTCCTGAGCCGTGATGCGAAGCTCTaGGACAGTGGACATGCGAGTGGAGCGGCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: LHVILLSRDAKL*DSGHASGAASK
Trigger: CTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAGCTTCGCATCACGGCTCAGGAGAATGACATGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5
ENST00000480574.1
ENST00000493027.5
CDS CAA 72 bp CACATAGACTTCCAGGCCCAACTTCCGGTAGCAGGGTaGATTCTTCAGGAGGAAGACGTCCCGGGAGGCCAT +
Preference number: 6 (lower is better)
Translates to: HIDFQAQLPVAG*ILQEEDVPGGH
Trigger: ATGGCCTCCCGGGACGTCTTCCTCCTGAAGAATCAACCCTGCTACCGGAAGTTGGGCCTGGAAGTCTATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 90 bp TTAGCTCGAAGAATAATTTGGAAGCACGCGTGGGAGCGGGAGGAATaGGAGTTGGCAAATGTCTGCCCAGAGGTTCTGCAGGCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LARRIIWKHAWEREE*ELANVCPEVLQALP
Trigger: GGGCAGCGCCTGCAGAACCTCTGGGCAGACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 72 bp TGCCGTCCTCCAGCACGCGCAGCTTGGCCTTCTTGTTaGGCAGGTCAAACAGCTTCCCATTGTAGATCTCGA +
Preference number: 6 (lower is better)
Translates to: CRPPARAAWPSC*AGQTASHCRSR
Trigger: TCGAGATCTACAATGGGAAGCTGTTTGACCTGCTCAACAAGAAGGCCAAGCTGCGCGTGCTGGAGGACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 90 bp AATGTCTGCCCAGAGGTTCTGCAGGCGCTGCCCATGTCGATCATCTaGATGACATCATCAGCAGAGTTAACCAGATGCTCCTGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: NVCPEVLQALPMSII*MTSSAELTRCSCSP
Trigger: GGGGCTGCAGGAGCATCTGGTTAACTCTGCTGATGATGTCATCAAGATGATCGACATGGGCAGCGCCTGCAGAACCTCTGGGCAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 90 bp GACATGATTTCCTCCGAAGAGGAACTGAAAACTGCTTGCGGGAGTTaGCAGCTGCAGGCAGCTCCACCTCCATGTCATTCTCCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: DMISSEEELKTACGS*QLQAAPPPCHSPEP
Trigger: CGGCTCAGGAGAATGACATGGAGGTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCCTCTTCGGAGGAAATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452259.5
ENST00000493027.5
CDS TCA 72 bp CTCGGATGGAATGGACTTGCTCTTCCATCTCCTCGCTaGCCATCCTCAATGGTATTTCAGCCACTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LGWNGLALPSPR*PSSMVFQPLQG
Trigger: GCCCTGCAGTGGCTGAAATACCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGTCCATTCCATCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
CDS GCA 72 bp TTGATGACATCATCAGCAGAGTTAACCAGATGCTCCTaGAGCCCCACCACTTGCACCTGTTGCTTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: LMTSSAELTRCS*SPTTCTCCLPS
Trigger: GGACGGCAAGCAACAGGTGCAAGTGGTGGGGCTGCAGGAGCATCTGGTTAACTCTGCTGATGATGTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp TTCACAGGGTTTGCAGAAGAGCTGCCTCGGATGGAATaGACTTGCTCTTCCATCTCCTCGCTGACCATCCTC +
Preference number: 6 (lower is better)
Translates to: FTGFAEELPRME*TCSSISSLTIL
Trigger: GAGGATGGTCAGCGAGGAGATGGAAGAGCAAGTCCATTCCATCCGAGGCAGCTCTTCTGCAAACCCTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
CDS CAA 72 bp AGGGTTTGCAGAAGAGCTGCCTCGGATGGAATGGACTaGCTCTTCCATCTCCTCGCTGACCATCCTCAATGG +
Preference number: 6 (lower is better)
Translates to: RVCRRAASDGMD*LFHLLADHPQW
Trigger: CCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGTCCATTCCATCCGAGGCAGCTCTTCTGCAAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
CDS CAA 72 bp AGACATGATTTCCTCCGAAGAGGAACTGAAAACTGCTaGCGGGAGTTTGCAGCTGCAGGCAGCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: RHDFLRRGTENC*REFAAAGSSTS
Trigger: GGAGGTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCCTCTTCGGAGGAAATCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452259.5
ENST00000493027.5
CDS CAA 90 bp GAAGAATGTCACATAGACTTCCAGGCCCAACTTCCGGTAGCAGGGTaGATTCTTCAGGAGGAAGACGTCCCGGGAGGCCATGGCATAGAT +
Preference number: 6 (lower is better)
Translates to: EECHIDFQAQLPVAG*ILQEEDVPGGHGID
Trigger: ATCTATGCCATGGCCTCCCGGGACGTCTTCCTCCTGAAGAATCAACCCTGCTACCGGAAGTTGGGCCTGGAAGTCTATGTGACATTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS GCA 72 bp TCCTCCGAACTGAGTTCACAGGGTTTGCAGAAGAGCTaGCTCGGATGGAATGGACTTGCTCTTCCATCTCCT +
Preference number: 6 (lower is better)
Translates to: SSELSSQGLQKS*LGWNGLALPSP
Trigger: AGGAGATGGAAGAGCAAGTCCATTCCATCCGAGGCAGCTCTTCTGCAAACCCTGTGAACTCAGTTCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000455186.5
CDS GCA 72 bp ACAAGACATGATTTCCTCCGAAGAGGAACTGAAAACTaGTTGCGGGAGTTTGCAGCTGCAGGCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: TRHDFLRRGTEN*LREFAAAGSST
Trigger: GGTGGAGCTGCCTGCAGCTGCAAACTCCCGCAAGCAGTTTTCAGTTCCTCTTCGGAGGAAATCATGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452259.5
ENST00000493027.5
CDS CCA 72 bp TTCCGCTTTGTTCACAAAGGTCTCCAGGTCATAGTCTaGCTGCTCGGTCATCTCAGAGAGCTCAAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: FRFVHKGLQVIV*LLGHLRELKPV
Trigger: GACTGGCTTGAGCTCTCTGAGATGACCGAGCAGCCAGACTATGACCTGGAGACCTTTGTGAACAAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 72 bp CCAGAGGTTCTGCAGGCGCTGCCCATGTCGATCATCTaGATGACATCATCAGCAGAGTTAACCAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: PEVLQALPMSII*MTSSAELTRCS
Trigger: GGAGCATCTGGTTAACTCTGCTGATGATGTCATCAAGATGATCGACATGGGCAGCGCCTGCAGAACCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 72 bp AGAATAATTTGGAAGCACGCGTGGGAGCGGGAGGAATaGGAGTTGGCAAATGTCTGCCCAGAGGTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: RIIWKHAWEREE*ELANVCPEVLQ
Trigger: CTGCAGAACCTCTGGGCAGACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAATTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 72 bp GGGCCCTTTAGGATCTTATGGGCAGGGGCAAGTTCCTaGCAGCTGCTACCTAACCCTAAGACTACCTACATT +
Preference number: 6 (lower is better)
Translates to: GPFRILWAGASS*QLLPNPKTTYI
Trigger: AATGTAGGTAGTCTTAGGGTTAGGTAGCAGCTGTCAGGAACTTGCCCCTGCCCATAAGATCCTAAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000480574.1
CDS CAA 90 bp GTGTCCGCGCCTCGCTCATTCCCTGCCAGATCTACCAAAGAGAACTaGCCATGCATTCTCCCTTTAGCTCGAAGAATAATTTGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: VSAPRSFPARSTKEN*PCILPLARRIIWKH
Trigger: GTGCTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGATCTGGCAGGGAATGAGCGAGGCGCGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 72 bp CTGACACGGAGGAGGAAACAAGTTCTAACTGTCTGGTaGGAGTCAAATGGGGGCCCTTTAGGATCTTATGGG +
Preference number: 6 (lower is better)
Translates to: LTRRRKQVLTVW*ESNGGPLGSYG
Trigger: CCCATAAGATCCTAAAGGGCCCCCATTTGACTCTCACCAGACAGTTAGAACTTGTTTCCTCCTCCGTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000480574.1
CDS GCA 72 bp ATCATCTTGATGACATCATCAGCAGAGTTAACCAGATaGTCCTGCAGCCCCACCACTTGCACCTGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: IILMTSSAELTR*SCSPTTCTCCL
Trigger: CAAGCAACAGGTGCAAGTGGTGGGGCTGCAGGAGCATCTGGTTAACTCTGCTGATGATGTCATCAAGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp GAGGAAACAAGTTCTAACTGTCTGGTGAGAGTCAAATaGGGGCCCTTTAGGATCTTATGGGCAGGGGCAAGT +
Preference number: 6 (lower is better)
Translates to: EETSSNCLVRVK*GPFRILWAGAS
Trigger: ACTTGCCCCTGCCCATAAGATCCTAAAGGGCCCCCATTTGACTCTCACCAGACAGTTAGAACTTGTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000480574.1
CDS CAA 72 bp CTTGCCATGCATTCTCCCTTTAGCTCGAAGAATAATTaGGAAGCACGCGTGGGAGCGGGAGGAATTGGAGTT +
Preference number: 6 (lower is better)
Translates to: LAMHSPFSSKNN*EARVGAGGIGV
Trigger: AACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 90 bp CAAAGAGAACTTGCCATGCATTCTCCCTTTAGCTCGAAGAATAATTaGGAAGCACGCGTGGGAGCGGGAGGAATTGGAGTTGGCAAATGT +
Preference number: 6 (lower is better)
Translates to: QRELAMHSPFSSKNN*EARVGAGGIGVGKC
Trigger: ACATTTGCCAACTCCAATTCCTCCCGCTCCCACGCGTGCTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CAA 90 bp AAGAGGAGACACTTGCTAGGAATGGAAATCACATCAATTTCTTTCTaGGCCAATTCTGCAGAAGGAGAGTATTTCAGGGGGTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: KRRHLLGMEITSISF*ANSAEGEYFRGCSR
Trigger: CCTGGAGCACCCCCTGAAATACTCTCCTTCTGCAGAATTGGCCAAGAAAGAAATTGATGTGATTTCCATTCCTAGCAAGTGTCTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493027.5
CDS CAA 72 bp CCTCGCTCATTCCCTGCCAGATCTACCAAAGAGAACTaGCCATGCATTCTCCCTTTAGCTCGAAGAATAATT +
Preference number: 6 (lower is better)
Translates to: PRSFPARSTKEN*PCILPLARRII
Trigger: AATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGATCTGGCAGGGAATGAGCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS CCA 72 bp AGTTGCTTTTCCACCTTCAAAGATTGTCTGTACCAGTaGCCTTGCTGTGAACCTGTAGACAACTTCATTCGA +
Preference number: 6 (lower is better)
Translates to: SCFSTFKDCLYQ*PCCEPVDNFIR
Trigger: TCGAATGAAGTTGTCTACAGGTTCACAGCAAGGCCACTGGTACAGACAATCTTTGAAGGTGGAAAAGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000493027.5
CDS TCA 72 bp TCAGGGGGTGCTCCAGGATCAGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGAAATTCTTTAATCATT +
Preference number: 6 (lower is better)
Translates to: SGGAPGSVIVSG*HSKVARNSLII
Trigger: AATGATTAAAGAATTTCGGGCTACTTTGGAATGTCATCCACTTACTATGACTGATCCTGGAGCACCCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493027.5
CDS GCA 72 bp TCATTCCCTGCCAGATCTACCAAAGAGAACTTGCCATaGATTCTCCCTTTAGCTCGAAGAATAATTTGGAAG +
Preference number: 6 (lower is better)
Translates to: SFPARSTKENLP*ILPLARRIIWK
Trigger: CTTCCAAATTATTCTTCGAGCTAAAGGGAGAATGCATGGCAAGTTCTCTTTGGTAGATCTGGCAGGGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372217.5
ENST00000372224.9
CDS TCA 72 bp CTGTGCTCTTCGATAGGATCAGTCATAGTAAGTGGATaGCATTCCAAAGTAGCCCGAAATTCTTTAATCATT +
Preference number: 6 (lower is better)
Translates to: LCSSIGSVIVSG*HSKVARNSLII
Trigger: AATGATTAAAGAATTTCGGGCTACTTTGGAATGTCATCCACTTACTATGACTGATCCTATCGAAGAGCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372217.5
ENST00000372224.9
ENST00000452259.5
ENST00000455186.5