RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF26B (Homo sapiens)

Ensembl gene IDs: ENSG00000162849

Ensembl transcript IDs: ENST00000366518.4, ENST00000407071.7, ENST00000479506.1, ENST00000483253.1, ENST00000615502.2, ENST00000626550.1, ENST00000629409.1

Found 2042 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCTGCCCAGACTCCCGTGTGGTGGCATTGAAGAGTGTCCTTCATaGGGGGACAGCTGGGCCACATACCCCGGCGGCAGCATGGAGGCC +
Preference number: 1 (lower is better)
Translates to: SLPRLPCGGIEECPS*GDSWATYPGGSMEA
Trigger: GGCCTCCATGCTGCCGCCGGGGTATGTGGCCCAGCTGTCCCCCCATGAAGGACACTCTTCAATGCCACCACACGGGAGTCTGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp GAGCAGGGAGGGCCCAGGTCGCAAAGGACTCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACCTGTTCTCTAAAGCACCTGCCCCAC +
Preference number: 1 (lower is better)
Translates to: EQGGPRSQRTPPPLC*RCRLLTCSLKHLPH
Trigger: GTGGGGCAGGTGCTTTAGAGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGGAGTCCTTTGCGACCTGGGCCCTCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CAGGAGCAGGGAGGGCCCAGGTCGCAAAGGACTCCTCCTCCCCTGTaGTGCAGGTGCCGTCTCCTCACCTGTTCTCTAAAGCACCTGCCC +
Preference number: 1 (lower is better)
Translates to: QEQGGPRSQRTPPPL*CRCRLLTCSLKHLP
Trigger: GGGCAGGTGCTTTAGAGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGGAGTCCTTTGCGACCTGGGCCCTCCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GCGAAGAGGCTCGCCCAAGGTTGCACAGCTAGTAACAACCAGGCCTaGCGGCCCATGTCCTTGCTCCTAGCTCAAGGCCTAGCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: AKRLAQGCTASNNQA*RPMSLLLAQGLAPP
Trigger: GGGAGGGGCTAGGCCTTGAGCTAGGAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACTAGCTGTGCAACCTTGGGCGAGCCTCTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp GGAGGGCCCAGGTCGCAAAGGACTCCTCCTCCCCTGTGCTGCAGGTaGCGTCTCCTCACCTGTTCTCTAAAGCACCTGCCCCACAATCAA +
Preference number: 1 (lower is better)
Translates to: GGPRSQRTPPPLCCR*RLLTCSLKHLPHNQ
Trigger: TTGATTGTGGGGCAGGTGCTTTAGAGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGGAGTCCTTTGCGACCTGGGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AGCTCAGGGAGGTCCTGCTTCCCAGGGCAACACACTTGTCAGACTTaGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: SSGRSCFPGQHTCQT*EIHRRKNEPCQSSL
Trigger: GAGGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp TGTTCTCTAAAGCACCTGCCCCACAATCAACCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGATGTGGCATCGAGGTCACCTGCTGC +
Preference number: 1 (lower is better)
Translates to: CSLKHLPHNQPSGST*PRCLLGCGIEVTCC
Trigger: GCAGCAGGTGACCTCGATGCCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGGGGCAGGTGCTTTAGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp TCTGCCTATCCAGGGTCGTGTGAGTTATGGAGGGGAAGCTCTCTCTaGCTTTGGGCAGGAGCAAAGACTGAGAGGACAAGCCTGTCCCTT +
Preference number: 1 (lower is better)
Translates to: SAYPGSCELWRGSSL*LWAGAKTERTSLSL
Trigger: AAGGGACAGGCTTGTCCTCTCAGTCTTTGCTCCTGCCCAAAGGCAGAGAGAGCTTCCCCTCCATAACTCACACGACCCTGGATAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CTGAAAGCCCATGATAAAGCAAACTCTCGCTCCTCAGCACCACCGTaGAATGCGACGTGGAGTGACTCCCAGGGACACAATAGCACCACC +
Preference number: 1 (lower is better)
Translates to: LKAHDKANSRSSAPP*NATWSDSQGHNSTT
Trigger: GGTGGTGCTATTGTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGAGCGAGAGTTTGCTTTATCATGGGCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TGCCCCACAATCAACCTTCTGGGTCTACCTGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCACCTGCTGCTCCAAACCTACTTTGG +
Preference number: 1 (lower is better)
Translates to: CPTINLLGLPDHAAC*DVASRSPAAPNLLW
Trigger: CCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp CCCTTGCCTCCTTGGGTTCTCTATCACCAAAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCACTGGGTAAGGCATCCTCCCGTGAC +
Preference number: 1 (lower is better)
Translates to: PLPPWVLYHQNQGET*NYHVWPLGKASSRD
Trigger: GTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTTTTGGTGATAGAGAACCCAAGGAGGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACTTGTCAGACTTGGGAGATACACAGA +
Preference number: 1 (lower is better)
Translates to: LSCRMGSRLRSSGRS*FPGQHTCQTWEIHR
Trigger: TCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp GTTTCATTTGGTGCAGAGAAAAGTGGGCTGTGTGCCTTTCCTCCCTaGCCAGACTCCCGTGTGGTGGCATTGAAGAGTGTCCTTCATGGG +
Preference number: 1 (lower is better)
Translates to: VSFGAEKSGLCAFPP*PDSRVVALKSVLHG
Trigger: CCCATGAAGGACACTCTTCAATGCCACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTCTCTGCACCAAATGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TCTCCTCACCTGTTCTCTAAAGCACCTGCCCCACAATCAACCTTCTaGGTCTACCTGACCACGCTGCTTGTTGGGATGTGGCATCGAGGT +
Preference number: 1 (lower is better)
Translates to: SPHLFSKAPAPQSTF*VYLTTLLVGMWHRG
Trigger: ACCTCGATGCCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGGGGCAGGTGCTTTAGAGAACAGGTGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AGACTCTTATGGAAAGTGCAAAGCCAGACTCGTGACCCAGGGAGCTaGCTTCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTT +
Preference number: 1 (lower is better)
Translates to: RLLWKVQSQTRDPGS*LPKHMSQQGHLNPV
Trigger: AACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp CAGCACTTTCCTCAGGAATTGAATGTTGAACCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGCCGGTGGGCGTGGATTTCCAAGCCC +
Preference number: 1 (lower is better)
Translates to: QHFPQELNVEPLGRG*VLFRASRWAWISKP
Trigger: GGGCTTGGAAATCCACGCCCACCGGCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGAGGAAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CACCTGCTGCTCCAAACCTACTTTGGAAACACACACACTGGCTCGTaGCGAGGGAAGTCTCTCTGTTTGAGTGGCCTCACCAGAATAACC +
Preference number: 1 (lower is better)
Translates to: HLLLQTYFGNTHTGS*RGKSLCLSGLTRIT
Trigger: GGTTATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCCTCGGCACGAGCCAGTGTGTGTGTTTCCAAAGTAGGTTTGGAGCAGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp GAAGCCTCCAAGGATATTACTGTTAAGCAAGCCCACTTACACAAGTaGTTTGAGGCCAGAGGCGAGCCCAGAGCATGCGACTGTCCTGCA +
Preference number: 1 (lower is better)
Translates to: EASKDITVKQAHLHK*FEARGEPRACDCPA
Trigger: TGCAGGACAGTCGCATGCTCTGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGTGGGCTTGCTTAACAGTAATATCCTTGGAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp AACACCCAGCTTTGTTTCATTTGGTGCAGAGAAAAGTGGGCTGTGTaGCTTTCCTCCCTGCCCAGACTCCCGTGTGGTGGCATTGAAGAG +
Preference number: 1 (lower is better)
Translates to: NTQLCFIWCREKWAV*LSSLPRLPCGGIEE
Trigger: CTCTTCAATGCCACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TGTTGGGATGTGGCATCGAGGTCACCTGCTGCTCCAAACCTACTTTaGAAACACACACACTGGCTCGTGCCGAGGGAAGTCTCTCTGTTT +
Preference number: 1 (lower is better)
Translates to: CWDVASRSPAAPNLL*KHTHWLVPREVSLF
Trigger: AAACAGAGAGACTTCCCTCGGCACGAGCCAGTGTGTGTGTTTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCCACATCCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp CTAAAGGAAGGCAGTGCAGCATGGAAGGAACCTCAGGGGAGGATGTaGCAGGGGCGAAAGCCAAACTCATCGATGACTCATCAGATGAGT +
Preference number: 1 (lower is better)
Translates to: LKEGSAAWKEPQGRM*QGRKPNSSMTHQMS
Trigger: ACTCATCTGATGAGTCATCGATGAGTTTGGCTTTCGCCCCTGCCACATCCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTCCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TGGAACTATCATGTCTGGCCACTGGGTAAGGCATCCTCCCGTGACTaGGACTGCTTCAGAATGGTCAGCCGGAACTCCTTCCTTCATCAT +
Preference number: 1 (lower is better)
Translates to: WNYHVWPLGKASSRD*DCFRMVSRNSFLHH
Trigger: ATGATGAAGGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp ATCACCAAAACCAAGGGGAGACCTGGAACTATCATGTCTGGCCACTaGGTAAGGCATCCTCCCGTGACTGGGACTGCTTCAGAATGGTCA +
Preference number: 1 (lower is better)
Translates to: ITKTKGRPGTIMSGH*VRHPPVTGTASEWS
Trigger: TGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTTTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GTTCTCTATCACCAAAACCAAGGGGAGACCTGGAACTATCATGTCTaGCCACTGGGTAAGGCATCCTCCCGTGACTGGGACTGCTTCAGA +
Preference number: 1 (lower is better)
Translates to: VLYHQNQGETWNYHV*PLGKASSRDWDCFR
Trigger: TCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTTTTGGTGATAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp AATGAAGGCTTGATACTGCCCCAAGCCGCACTGTGTCCAGTGTTATaGCATTGCTGCAGGTTCTGGGTAGGGCCACCCAAAAGCAGAATG +
Preference number: 1 (lower is better)
Translates to: NEGLILPQAALCPVL*HCCRFWVGPPKSRM
Trigger: CATTCTGCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATGTCATAACACTGGACACAGTGCGGCTTGGGGCAGTATCAAGCCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp TATCATGTCTGGCCACTGGGTAAGGCATCCTCCCGTGACTGGGACTaGTTCAGAATGGTCAGCCGGAACTCCTTCCTTCATCATCAATAC +
Preference number: 1 (lower is better)
Translates to: YHVWPLGKASSRDWD*FRMVSRNSFLHHQY
Trigger: GTATTGATGATGAAGGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TGGGCATGTCTCCTGTTTGCACCTTTGCATAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACTCGTGACCCAGGGAGCTGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: WACLLFAPLHRSRLL*KVQSQTRDPGSWLP
Trigger: TGGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp CAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGTTCCCATTTACCGAGTTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: QGHLNPVLITKDQVM*SSQDFGSHLPSSAS
Trigger: GCTGGCTGAACTCGGTAAATGGGAACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp GTCTCCTGTTTGCACCTTTGCATAGAAGCAGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACCCAGGGAGCTGGCTTCCAAAGCACA +
Preference number: 1 (lower is better)
Translates to: VSCLHLCIEADSYGK*KARLVTQGAGFQST
Trigger: TGTGCTTTGGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp TGCTACAAATGGATAAAAGCAGATTTAGGCAGGAGGCAAGCCGAATaGCACTCCCCTCGGAAGGATTCCATCGGTTTCAGTCCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: CYKWIKADLGRRQAE*HSPRKDSIGFSPGR
Trigger: CCTTCCTGGACTGAAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATCTGCTTTTATCCATTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AGCAACCAGCAGCCCAATGGCAAACTCGAAGGATTGGCTTCCCTTTaGGTCCAGAAGCCTCCAAGGATATTACTGTTAAGCAAGCCCACT +
Preference number: 1 (lower is better)
Translates to: SNQQPNGKLEGLASL*VQKPPRILLLSKPT
Trigger: AGTGGGCTTGCTTAACAGTAATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GGCCACTGGGTAAGGCATCCTCCCGTGACTGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCCTTCATCATCAATACAGTCAATTTA +
Preference number: 1 (lower is better)
Translates to: GHWVRHPPVTGTASE*SAGTPSFIINTVNL
Trigger: TAAATTGACTGTATTGATGATGAAGGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp AACATCAACATAAAGCATTCTCCTTCACCGTGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTG +
Preference number: 1 (lower is better)
Translates to: NINIKHSPSPWPARS*EVFCDCHLGKESDL
Trigger: CAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATGCTTTATGTTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CTCCAGCTCAGGGGTTCCCACCTTTGTCAAGACAGGACACATCTCTaGATTTGCATCTTAATGCTCCCCCATGTTAAGAATGGCAACTGG +
Preference number: 1 (lower is better)
Translates to: LQLRGSHLCQDRTHL*ICILMLPHVKNGNW
Trigger: CCAGTTGCCATTCTTAACATGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTGAGCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CCTAACGTTTATATAGCTTGCAAAGGCCCATGCACAAAACTAGCCTaGCAAGGGGCTGCTGGGACCTGCCCAAGTACAGAAGAGTTGAAT +
Preference number: 1 (lower is better)
Translates to: PNVYIACKGPCTKLA*QGAAGTCPSTEELN
Trigger: ATTCAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp ATAATCAAGCCAACACCTAACGTTTATATAGCTTGCAAAGGCCCATaGACAAAACTAGCCTGCCAAGGGGCTGCTGGGACCTGCCCAAGT +
Preference number: 1 (lower is better)
Translates to: IIKPTPNVYIACKGP*TKLACQGAAGTCPS
Trigger: ACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTTAGGTGTTGGCTTGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp CTAAGTACCATCCTCGATGCGAAGGCTGCAGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCC +
Preference number: 1 (lower is better)
Translates to: LSTILDAKAAGTLRF*AALSSAPQLLSGKS
Trigger: GGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AGAGAGAGAATGGACAACATCAACATAAAGCATTCTCCTTCACCGTaGCCTGCGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGG +
Preference number: 1 (lower is better)
Translates to: RERMDNINIKHSPSP*PARSCEVFCDCHLG
Trigger: CCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATGCTTTATGTTGATGTTGTCCATTCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AGCTTGCAAAGGCCCATGCACAAAACTAGCCTGCCAAGGGGCTGCTaGGACCTGCCCAAGTACAGAAGAGTTGAATTTCTGACTTTAACA +
Preference number: 1 (lower is better)
Translates to: SLQRPMHKTSLPRGC*DLPKYRRVEFLTLT
Trigger: TGTTAAAGTCAGAAATTCAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp ATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTaGAAGCCCATGATAAAGCAAACTCTCGCTCCTCAGCACCACCGT +
Preference number: 1 (lower is better)
Translates to: IQGQQDQSLQLAGGN*KPMIKQTLAPQHHR
Trigger: ACGGTGGTGCTGAGGAGCGAGAGTTTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GAGGGGAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTaGGAACTGAAAGCCCATGATAAAGCAAACTCTCGCTCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: EGNSRTTRSKFAARR*ELKAHDKANSRSSA
Trigger: TGCTGAGGAGCGAGAGTTTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp AAGCCTGTCCCTTCTTGGCATAGAGGCTTTGGGACACAGGAGAGCTaGAATCCTTGTACTCTGGACAACAGACAAGATGTACAGTCTCAA +
Preference number: 1 (lower is better)
Translates to: KPVPSWHRGFGTQES*NPCTLDNRQDVQSQ
Trigger: TTGAGACTGTACATCTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp CAGCCTAGCTTGGAAATAAATAGGCTCATGAAGATATGCTGCATTTaGGGGCAAAAGGGAAGCGTGCTCTGCACACGCCTAAGTACCATC +
Preference number: 1 (lower is better)
Translates to: QPSLEINRLMKICCI*GQKGSVLCTRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTCATGAGCCTATTTATTTCCAAGCTAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp GGACCTTGGGAACAACTATGCTTAGAGATTAAGGTTTGTATGCAATaGAGGCTTGATACTGCCCCAAGCCGCACTGTGTCCAGTGTTATG +
Preference number: 1 (lower is better)
Translates to: GPWEQLCLEIKVCMQ*RLDTAPSRTVSSVM
Trigger: CATAACACTGGACACAGTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATACAAACCTTAATCTCTAAGCATAGTTGTTCCCAAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp TGTAGGGAACTAATACTATCAGCACTTTCCTCAGGAATTGAATGTTaGACCATTAGGAAGAGGCTGAGTCCTCTTCCGTGCAAGCCGGTG +
Preference number: 1 (lower is better)
Translates to: CRELILSALSSGIEC*TIRKRLSPLPCKPV
Trigger: CACCGGCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGAGGAAAGTGCTGATAGTATTAGTTCCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CAGGGTTTAAGACGTATTGTCTTTAGAAGCGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTAGTCCAGCAGGAAAGAACAATGAGT +
Preference number: 1 (lower is better)
Translates to: QGLRRIVFRSEGLCV*SKNGLLVQQERTMS
Trigger: ACTCATTGTTCTTTCCTGCTGGACTAGTAACCCATTCTTGGAGCACACACAGAGTCCCTCGCTTCTAAAGACAATACGTCTTAAACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 90 bp CTCATATTTATCATAATCAAGCCAACACCTAACGTTTATATAGCTTaGAAAGGCCCATGCACAAAACTAGCCTGCCAAGGGGCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: LIFIIIKPTPNVYIA*KGPCTKLACQGAAG
Trigger: CCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTTAGGTGTTGGCTTGATTATGATAAATATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp CTCTGCATTTGCATCTTAATGCTCCCCCATGTTAAGAATGGCAACTaGCGAATAAACAACGGGCAGAGTGTTCTGATTCCAAATCCGGAA +
Preference number: 1 (lower is better)
Translates to: LCICILMLPHVKNGN*RINNGQSVLIPNPE
Trigger: TTCCGGATTTGGAATCAGAACACTCTGCCCGTTGTTTATTCGCCAGTTGCCATTCTTAACATGGGGGAGCATTAAGATGCAAATGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GAACTCCAATTGCTTTCCCAAACCCTCTTCAGTAGCACTAGGGGTTaGATGGGAGTCTTAGGGAAATGTAGGGAACTAATACTATCAGCA +
Preference number: 1 (lower is better)
Translates to: ELQLLSQTLFSSTRG*MGVLGKCRELILSA
Trigger: TGCTGATAGTATTAGTTCCCTACATTTCCCTAAGACTCCCATCCAACCCCTAGTGCTACTGAAGAGGGTTTGGGAAAGCAATTGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp GTTCTGATTCCAAATCCGGAAGAGATGAAAGAGACAGCTTCCTCGTaGTGTAGAGGGGAATTCAAGGACAACAAGATCAAAGTTTGCAGC +
Preference number: 1 (lower is better)
Translates to: VLIPNPEEMKETASS*CRGEFKDNKIKVCS
Trigger: GCTGCAAACTTTGATCTTGTTGTCCTTGAATTCCCCTCTACATCACGAGGAAGCTGTCTCTTTCATCTCTTCCGGATTTGGAATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp CCGCCTTATAAGAACATAATAGACTTCAAGTTGAAGGCTAATTTATaGCAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGC +
Preference number: 1 (lower is better)
Translates to: PPYKNIIDFKLKANL*QTRPDSCLSNSPRC
Trigger: GCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATAAATTAGCCTTCAACTTGAAGTCTATTATGTTCTTATAAGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp GGCATAGAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTaGACAACAGACAAGATGTACAGTCTCAAGAATCCTTCTTCTAAT +
Preference number: 1 (lower is better)
Translates to: GIEALGHRRAEILVL*TTDKMYSLKNPSSN
Trigger: ATTAGAAGAAGGATTCTTGAGACTGTACATCTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTCTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp AAACACACACACTGGCTCGTGCCGAGGGAAGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCATAAAAGACAGGTAATATTTATTCAT +
Preference number: 1 (lower is better)
Translates to: KHTHWLVPREVSLFE*PHQNNHKRQVIFIH
Trigger: ATGAATAAATATTACCTGTCTTTTATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCCTCGGCACGAGCCAGTGTGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp GCTTACTACAGAAACAGCTTAGATTTTGAACTAAGCCCTGTGCATTaGGGATTGGACCCTAATCCCTATTCTCTTGCTTTATCTGTCCTC +
Preference number: 1 (lower is better)
Translates to: AYYRNSLDFELSPVH*GLDPNPYSLALSVL
Trigger: GAGGACAGATAAAGCAAGAGAATAGGGATTAGGGTCCAATCCTCAATGCACAGGGCTTAGTTCAAAATCTAAGCTGTTTCTGTAGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp GAATGGTATGTGTTCATGTCTACACATACCTGGTGCAATATGATCTaGTGGGAAGAATCCAATAAGCTGGACTCAAGTCCCTGTTTTGCT +
Preference number: 1 (lower is better)
Translates to: EWYVFMSTHTWCNMI*WEESNKLDSSPCFA
Trigger: AGCAAAACAGGGACTTGAGTCCAGCTTATTGGATTCTTCCCATCAGATCATATTGCACCAGGTATGTGTAGACATGAACACATACCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp TTAGAACTCAGGTTTTCTGTCCTATGGAATATATCACGGACAGGATaGCTGGCAAAGCTGGAATTAGAACTCAGGTTTTCTGTCCTATGG +
Preference number: 1 (lower is better)
Translates to: LELRFSVLWNISRTG*LAKLELELRFSVLW
Trigger: CCATAGGACAGAAAACCTGAGTTCTAATTCCAGCTTTGCCAGTCATCCTGTCCGTGATATATTCCATAGGACAGAAAACCTGAGTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp TTTATAAGCTGTTACCCACCAATGTTGACAGATACTTTCTGGAGGTaGAAAAAGAGGTATCAGAATCCAAAGAAACACTGCCCCCACCAA +
Preference number: 1 (lower is better)
Translates to: FISCYPPMLTDTFWR*KKRYQNPKKHCPHQ
Trigger: TTGGTGGGGGCAGTGTTTCTTTGGATTCTGATACCTCTTTTTCCACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACAGCTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp ATGCACTTTATAAGCTGTTACCCACCAATGTTGACAGATACTTTCTaGAGGTGGAAAAAGAGGTATCAGAATCCAAAGAAACACTGCCCC +
Preference number: 1 (lower is better)
Translates to: MHFISCYPPMLTDTF*RWKKRYQNPKKHCP
Trigger: GGGGCAGTGTTTCTTTGGATTCTGATACCTCTTTTTCCACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACAGCTTATAAAGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 90 bp CCACAAAAAGTCAGAGATCGTAGCCAGCAAACAATGTCTTTACACTaGAAAATGCCACACAGCTTAATGGATTCATGTCACCAGTTTGTG +
Preference number: 1 (lower is better)
Translates to: PQKVRDRSQQTMSLH*KMPHSLMDSCHQFV
Trigger: CACAAACTGGTGACATGAATCCATTAAGCTGTGTGGCATTTTCCAGTGTAAAGACATTGTTTGCTGGCTACGATCTCTGACTTTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 90 bp CAAAGATCATCTAGCACAATGTCTTCATTTTATAGGTTAGAAAACTaGGTTCTGGAGGAGTTAGGTAATATATCACGGACGGGACGACTG +
Preference number: 1 (lower is better)
Translates to: QRSSSTMSSFYRLEN*VLEELGNISRTGRL
Trigger: CAGTCGTCCCGTCCGTGATATATTACCTAACTCCTCCAGAACTCAGTTTTCTAACCTATAAAATGAAGACATTGTGCTAGATGATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGCGTGCAACATCTCTaGAGTCCTGGGGAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGVQHL*SPGERG
Trigger: CCCCCGCTCCCCAGGACTTCAGAGATGTTGCACGCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGAAGGCAGTGCAGCATaGAAGGAACCTCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTREGSAA*KEPQGR
Trigger: CCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGGCGTGCAACATCTCTaGAGTCCTGGGGAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLGVQHL*SPGERG
Trigger: CCCCCGCTCCCCAGGACTTCAGAGATGTTGCACGCC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTATCCAGGGTCGTGTaGGTTATGGAGGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLSRVV*VMEGKL
Trigger: GAGCTTCCCCTCCATAACTCACACGACCCTGGATAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCAAAGCCAGACTCGTaGCCCAGGGAGCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPAKPDS*PRELAS
Trigger: GGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGC +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPLGRG*VLFRAS
Trigger: GCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCCAGCTGTGTGGGCTaGAGTGTCCAGAGGTACACT +
Preference number: 2 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGASCVG*SVQRYT
Trigger: AGTGTACCTCTGGACACTGCAGCCCACACAGCTGGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGAAGGCAGTGCAGCATaGAAGGAACCTCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAEGSAA*KEPQGR
Trigger: CCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCATCCTCCCGTGACTaGGACTGCTTCAGAATGGTC +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRASSRD*DCFRMV
Trigger: GACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp CTCAACGCCCGCTCCAGACTTGCCACCAACCTTCATCCTCATTCATaGTCTTTGATGCCCCAGCACAGAGGGCCTAGGGGCGTGCAACAT +
Preference number: 2 (lower is better)
Translates to: LNARSRLATNLHPHS*SLMPQHRGPRGVQH
Trigger: ATGTTGCACGCCCCTAGGCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp GAGCTCAGGGAGGTCCTGCTTCCCAGGGCAACACACTTGTCAGACTaGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: ELREVLLPRATHLSD*GDTQKEERAMPEQP
Trigger: AGGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTCATTCATTGTCTTTaGTGCCCCAGCACAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLIHCL*CPSTEG
Trigger: GCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGTCTCTGAACAAGCCTaGGAAGGTCTCTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAVSEQA*EGLSAG
Trigger: CCCAGCTGAGAGACCTTCTCAGGCTTGTTCAGAGAC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGGGGAAGCTCTCTCTaGCTTTGGGCAGGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARGSSL*LWAGAK
Trigger: CTTTGCTCCTGCCCAAAGGCAGAGAGAGCTTCCCCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGACCCTGGATGGTAGATaGGGCTGGACTGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRTLDGR*GWTEVT
Trigger: AGTGACTTCAGTCCAGCCGCATCTACCATCCAGGGT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 2 (lower is better)
Translates to: SPEHATVLQNGVKVKELRKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 2 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACT +
Preference number: 2 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSSGRS*FPGQHT
Trigger: AGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGTGCCTTTCCTCCCTaGCCAGACTCCCGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHCAFPP*PDSRVV
Trigger: CACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGGCCACGCAAACTGTaGATTTGTGGGTCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGPRKL*ICGSRN
Trigger: GTTCCTTGACCCACAAATCCACAGTTTGCGTGGCCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGTTCAGCCAGCTGTGTaGGCTGCAGTGTCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: RDPARCSVIAILGRSLTCVQPAV*AAVSRG
Trigger: ACCTCTGGACACTGCAGCCCACACAGCTGGCTGAAC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGAAGGCAGTGCAGCATaGAAGGAACCTCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RDPARCSVIAILGRSLTCEGSAA*KEPQGR
Trigger: CCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCGTGCAATGCGACGTaGAGTGACTCCCAGGGACAC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPCNAT*SDSQGH
Trigger: GTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCGCCCGCTCCAGACTTaGCACCAACCTTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRPLQT*HQPSSS
Trigger: TGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCCCTGTGCTGCAGGTaGCGTCTCCTCACCTGTTCT +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPLCCR*RLLTCS
Trigger: AGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGGGGAAGCTCTCTCTaGCTTTGGGCAGGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRGSSL*LWAGAK
Trigger: CTTTGCTCCTGCCCAAAGGCAGAGAGAGCTTCCCCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGCATGCGACTGTCCTaGAGAATGGGGTCAAGGTTA +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASMRLS*RMGSRL
Trigger: TAACCTTGACCCCATTCTGCAGGACAGTCGCATGCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGGAGGCAAGCCGAATaGCACTCCCCTCGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPRRQAE*HSPRKD
Trigger: ATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCCTTCACCGTGGCCTaGGAGATCCTGCGAGGTGTT +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSFTVA*EILRGV
Trigger: AACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCCCGTGACTGGGACTaGTTCAGAATGGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSRDWD*FRMVSR
Trigger: CCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTA +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTREGLCV*SKNGLL
Trigger: TAGTAACCCATTCTTGGAGCACACACAGAGTCCCTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTGCTTGTTGGGATGTaGCATCGAGGTCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLLVGM*HRGHLL
Trigger: CAGCAGGTGACCTCGATGCCACATCCCAACAAGCAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCTGCTTGTTGGGATGTaGCATCGAGGTCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: LVRLGRYTEGRTSHARAALLVGM*HRGHLL
Trigger: CAGCAGGTGACCTCGATGCCACATCCCAACAAGCAG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCACAATCAACCTTCTaGGTCTACCTGACCACGCTG +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPQSTF*VYLTTL
Trigger: CAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCA +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGTLRF*AALSSA
Trigger: TGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGANSKD*LPFGSR
Trigger: TCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAANSKD*LPFGSR
Trigger: TCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCAACCAGCAGCCCAATaGCAAACTCGAAGGATTGGC +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFQPAAQ*QTRRIG
Trigger: GCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTATCATGTCTGGCCACTaGGTAAGGCATCCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPIMSGH*VRHPPV
Trigger: CACGGGAGGATGCCTTACCCAGTGGCCAGACATGAT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTCCCCCTTGCCTCCTTaGGTTCTCTATCACCAAAAC +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASPLPP*VLYHQN
Trigger: GTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCACGCTGCGATGCCTaGCTGTTTACCCCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPRCDA*LFTPAS
Trigger: AGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp AAGGTTAAGGAGCTCAGGGAGGTCCTGCTTCCCAGGGCAACACACTaGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCA +
Preference number: 2 (lower is better)
Translates to: KVKELREVLLPRATH*SDLGDTQKEERAMP
Trigger: TGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCTCCTTAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGCGTGCAACATCTCTaGAGTCCTGGGGAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGVQHL*SPGERG
Trigger: CCCCCGCTCCCCAGGACTTCAGAGATGTTGCACGCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCTATCCAGGGTCGTGTaGGTTATGGAGGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLSRVV*VMEGKL
Trigger: GAGCTTCCCCTCCATAACTCACACGACCCTGGATAG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAAGATATGCTGCATTTaGGGGCAAAAGGGAAGCGTG +
Preference number: 2 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGKICCI*GQKGSV
Trigger: CACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 2 (lower is better)
Translates to: SPEHATVLQNGVKVKELRKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCGCCCGCTCCAGACTTaGCACCAACCTTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: EALGHRRAEILVLWTTDKRPLQT*HQPSSS
Trigger: TGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCTAAAGGAAGGCAGTaGAGCATGGAAGGAACCTCA +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFAKGRQ*SMEGTS
Trigger: TGAGGTTCCTTCCATGCTGCACTGCCTTCCTTTAGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGC +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPWPARS*EVFCDC
Trigger: GCAATCACAGAACACCTCGCAGGATCTCGCAGGCCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGTTGATATTCCCCCTTaGCTCCTTGGGTTCTCTATC +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAVDIPP*LLGFSI
Trigger: GATAGAGAACCCAAGGAGGCAAGGGGGAATATCAAC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAACAAGATCAAAGTTTaGAGCTCGCAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRNKIKV*SSQVGT
Trigger: AGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCCACAATCAACCTTCTaGGTCTACCTGACCACGCTG +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPPQSTF*VYLTTL
Trigger: CAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGGTCGTGTGAGTTATaGAGGGGAAGCTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGSCEL*RGSSLC
Trigger: GCAGAGAGAGCTTCCCCTCCATAACTCACACGACCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFANSKD*LPFGSR
Trigger: TCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp CAGCAACCAGCAGCCCAATGGCAAACTCGAAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAGGATATTACTGTTAAGCAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: QQPAAQWQTRRIGFP*GPEASKDITVKQAH
Trigger: GTGGGCTTGCTTAACAGTAATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp AGGCTTGATACTGCCCCAAGCCGCACTGTGTCCAGTGTTATGACATaGCTGCAGGTTCTGGGTAGGGCCACCCAAAAGCAGAATGTGTTT +
Preference number: 2 (lower is better)
Translates to: RLDTAPSRTVSSVMT*LQVLGRATQKQNVF
Trigger: AAACACATTCTGCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATGTCATAACACTGGACACAGTGCGGCTTGGGGCAGTATCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCTCATTCATTGTCTTTaGTGCCCCAGCACAGAGGGC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLIHCL*CPSTEG
Trigger: GCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAATGAATATGAATTTTaGGGGCCACGCAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRNEYEF*GPRKLW
Trigger: CCACAGTTTGCGTGGCCCTCAAAATTCATATTCATT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGTCTCTGAACAAGCCTaGGAAGGTCTCTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGVSEQA*EGLSAG
Trigger: CCCAGCTGAGAGACCTTCTCAGGCTTGTTCAGAGAC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTGTCCAGAGGTACACTaGCCAAGAAACGTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPACPEVH*PRNVVF
Trigger: AAACACTACGTTTCTTGGTCAGTGTACCTCTGGACA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTCGCAGGTGGGAACTaGAAGCCCATGATAAAGCAA +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLAGGN*KPMIKQ
Trigger: TTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCCCTGTGCTGCAGGTaGCGTCTCCTCACCTGTTCT +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPLCCR*RLLTCS
Trigger: AGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCAGATTTGTCAGCCTTaGCTTCTATCCAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRQICQP*LLSKEG
Trigger: ACCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGDHAAC*DVASRS
Trigger: TGACCTCGATGCCACATCCCAACAAGCAGCGTGGTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGGCCACGCAAACTGTaGATTTGTGGGTCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGPRKL*ICGSRN
Trigger: GTTCCTTGACCCACAAATCCACAGTTTGCGTGGCCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGTCGTGTGAGTTATaGAGGGGAAGCTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGSCEL*RGSSLC
Trigger: GCAGAGAGAGCTTCCCCTCCATAACTCACACGACCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTTGAACCTCCACCCTaGATGGTAGATGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHFEPPP*MVDAAG
Trigger: TCCAGCCGCATCTACCATCCAGGGTGGAGGTTCAAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCCTTCCACGGTGTTTaGCGTTTGCACCTTTCCTAC +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSFHGV*RLHLSY
Trigger: GTAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACGGGCAGAGTGTTCTaGTTCCAAATCCGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTGRVF*FQIRKR
Trigger: TCTCTTCCGGATTTGGAATCAGAACACTCTGCCCGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCATCGAGGTCACCTGCTaGTCCAAACCTACTTTGGAA +
Preference number: 2 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAIEVTC*SKPTLE
Trigger: TTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGAT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGCATGCGACTGTCCTaGAGAATGGGGTCAAGGTTA +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSMRLS*RMGSRL
Trigger: TAACCTTGACCCCATTCTGCAGGACAGTCGCATGCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGCGAGCCCAGAGCATaGGACTGTCCTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGEPRA*DCPAEW
Trigger: CCATTCTGCAGGACAGTCGCATGCTCTGGGCTCGCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGCGAGCCCAGAGCATaGGACTGTCCTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGEPRA*DCPAEW
Trigger: CCATTCTGCAGGACAGTCGCATGCTCTGGGCTCGCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTCCCCACGCTGCGATaGCTGGCTGTTTACCCCAGC +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRFPTLR*LAVYPS
Trigger: GCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCTGAGTCCTCTTCCGTaGAAGCCGGTGGGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKLSPLP*KPVGVD
Trigger: ATCCACGCCCACCGGCTTGCACGGAAGAGGACTCAG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCA +
Preference number: 2 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDDHAAC*DVASRS
Trigger: TGACCTCGATGCCACATCCCAACAAGCAGCGTGGTC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPNQGET*NYHVWP
Trigger: TGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATCCTTCCACGGTGTTTaGCGTTTGCACCTTTCCTAC +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSFHGV*RLHLSY
Trigger: GTAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGAAATATGGCTCTGGTaGATTGGTTCCAGCTTTCGT +
Preference number: 2 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAEIWLW*IGSSFR
Trigger: ACGAAAGCTGGAACCAATTCACCAGAGCCATATTTC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAAGATATGCTGCATTTaGGGGCAAAAGGGAAGCGTG +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPKICCI*GQKGSV
Trigger: CACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATATCAGCAGTGGCCAATaGTATAGACGGCTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHISSGQ*YRRLCL
Trigger: CAAACACAGCCGTCTATATCATTGGCCACTGCTGAT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCCGTGTGGTGGCATTaGAGAGTGTCCTTCATGGGG +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPVWWH*RVSFMG
Trigger: CCCCATGAAGGACACTCTTCAATGCCACCACACGGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSSGRS*FPGQHT
Trigger: AGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATCCTTCACCGTGGCCTaGGAGATCCTGCGAGGTGTT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSFTVA*EILRGV
Trigger: AACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 2 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATTGGGAGCCAAGACCTaGACATCCATAGTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLGAKT*TSIVFS
Trigger: GCTGAAGACTATGGATGTCCAGGTCTTGGCTCCCAA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp AGCCTGTTCAGCCAGCAGATTTGGGCATGTCTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTATGGAAAGTGCAAAGCCAGACTCGT +
Preference number: 2 (lower is better)
Translates to: SLFSQQIWACLLFAP*HRSRLLWKVQSQTR
Trigger: ACGAGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCCAAATCTGCTGGCTGAACAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAATGAATATGAATTTTaGGGGCCACGCAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPNEYEF*GPRKLW
Trigger: CCACAGTTTGCGTGGCCCTCAAAATTCATATTCATT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGTCCAGAGGTACACTaGCCAAGAAACGTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPCPEVH*PRNVVF
Trigger: AAACACTACGTTTCTTGGTCAGTGTACCTCTGGACA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGAAAAGTGGGCTGTGTaGCTTTCCTCCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKEKWAV*LSSLPR
Trigger: TCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCTTAATCAGTCATTCTaGGTTGTTTTGTGTTCGCTT +
Preference number: 2 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLNQSF*VVLCSL
Trigger: AAGCGAACACAAAACAACCCAGAATGACTGATTAAG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTGCTTGTTGGGATGTaGCATCGAGGTCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLLVGM*HRGHLL
Trigger: CAGCAGGTGACCTCGATGCCACATCCCAACAAGCAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCACAATCAACCTTCTaGGTCTACCTGACCACGCTG +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPQSTF*VYLTTL
Trigger: CAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 2 (lower is better)
Translates to: LVRLGRYTEGRTSHARAARRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACT +
Preference number: 2 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRSRLL*KVQSQT
Trigger: AGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCATTGCTGCAGGTTCTaGGTAGGGCCACCCAAAAGC +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKHCCRF*VGPPKS
Trigger: GCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp ATGTTTGAAACCAGCAACCAGCAGCCCAATGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAGAAGCCTCCAAGGATATTACTGTTA +
Preference number: 2 (lower is better)
Translates to: MFETSNQQPNGKLEG*ASLWVQKPPRILLL
Trigger: TAACAGTAATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTGCTGGTTTCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTTGTTGTTTTCATCTTaGCTAGCACCATCTGTACAC +
Preference number: 2 (lower is better)
Translates to: LVRLGRYTEGRTSHARAALLFSS*LAPSVH
Trigger: GTGTACAGATGGTGCTAGTCAAGATGAAAACAACAA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCAAAGCCAGACTCGTaGCCCAGGGAGCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTAKPDS*PRELAS
Trigger: GGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTGAAGGCTAATTTATaGCAAACCAGGCCAGATTCC +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLKANL*QTRPDS
Trigger: GGAATCTGGCCTGGTTTGTCATAAATTAGCCTTCAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACACATCTCTGCATTTaGATCTTAATGCTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTHLCI*ILMLPH
Trigger: ATGGGGGAGCATTAAGATGCAAATGCAGAGATGTGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACCCTGGATGGTAGATaGGGCTGGACTGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTLDGR*GWTEVT
Trigger: AGTGACTTCAGTCCAGCCGCATCTACCATCCAGGGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGGCCACGCAAACTGTaGATTTGTGGGTCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGPRKL*ICGSRN
Trigger: GTTCCTTGACCCACAAATCCACAGTTTGCGTGGCCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHRRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCAAGTGGGCACAACTaGATTTTTGGTCAATACAAA +
Preference number: 2 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPSGHN*IFGQYK
Trigger: TTTGTATTGACCAAAAATGCAGTTGTGCCCACTTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGTGCCTTTCCTCCCTaGCCAGACTCCCGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVCAFPP*PDSRVV
Trigger: CACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAAGCCTGTCCCTTCTTaGCATAGAGGCTTTGGGACA +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRKPVPS*HRGFGT
Trigger: TGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCA +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGTLRF*AALSSA
Trigger: TGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTTCAGCCAGCAGATTTaGGCATGTCTCCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESFSQQI*ACLLFA
Trigger: TGCAAACAGGAGACATGCCCAAATCTGCTGGCTGAA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTTGCAGCTCGCAGGTaGGAACTGAAAGCCCATGAT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRFAARR*ELKAHD
Trigger: ATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAAGATATGCTGCATTTaGGGGCAAAAGGGAAGCGTG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRKICCI*GQKGSV
Trigger: CACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTCCACTCGGGAACCTaGGGCCCAGCAAAGCGAAGA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKFHSGT*GPAKRR
Trigger: TCTTCGCTTTGCTGGGCCTCAGGTTCCCGAGTGGAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGCCCGCTCCAGACTTaGCACCAACCTTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRPLQT*HQPSSS
Trigger: TGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACACGGTGTTTGACGTTTaGACCTTTCCTACAGAAAAC +
Preference number: 2 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDTVFDV*TFPTEN
Trigger: GTTTTCTGTAGGAAAGGTGCAAACGTCAAACACCGT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACT +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSSGRS*FPGQHT
Trigger: AGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGGAGGCAAGCCGAATaGCACTCCCCTCGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRRQAE*HSPRKD
Trigger: ATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCCTTCACCGTGGCCTaGGAGATCCTGCGAGGTGTT +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSFTVA*EILRGV
Trigger: AACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGTTCAGCCAGCTGTGTaGGCTGCAGTGTCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKVQPAV*AAVSRG
Trigger: ACCTCTGGACACTGCAGCCCACACAGCTGGCTGAAC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAATGAATATGAATTTTaGGGGCCACGCAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESNEYEF*GPRKLW
Trigger: CCACAGTTTGCGTGGCCCTCAAAATTCATATTCATT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGAAATATGGCTCTGGTaGATTGGTTCCAGCTTTCGT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICREIWLW*IGSSFR
Trigger: ACGAAAGCTGGAACCAATTCACCAGAGCCATATTTC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGC +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPLGRG*VLFRAS
Trigger: GCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCACGGTGTTTGACGTTTaGACCTTTCCTACAGAAAAC +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESTVFDV*TFPTEN
Trigger: GTTTTCTGTAGGAAAGGTGCAAACGTCAAACACCGT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGACCAGGCCAGATTCCTaGCTGTCTAATTCCCCACGC +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKTRPDS*LSNSPR
Trigger: GCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTDHAAC*DVASRS
Trigger: TGACCTCGATGCCACATCCCAACAAGCAGCGTGGTC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAATGGCTCTGGTGAATTaGTTCCAGCTTTCGTTCAAG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRMALVN*FQLSFK
Trigger: CTTGAACGAAAGCTGGAACCAATTCACCAGAGCCAT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGATTGGCTTCCCTTTaGGTCCAGAAGCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGLASL*VQKPPR
Trigger: CCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCC +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGTASE*SAGTPS
Trigger: GGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGTASE*SAGTPS
Trigger: GGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGATACACACCCAAGTaGGCACAACTGCATTTTTGG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRYTPK*AQLHFW
Trigger: CCAAAAATGCAGTTGTGCCCACTTGGGTGTGTATCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp GACAAGATGTACAGTCTCAAGAATCCTTCTTCTAATCCAATACAGTaGAAGTCTCTGAACAAGCCTGAGAAGGTCTCTCAGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: DKMYSLKNPSSNPIQ*KSLNKPEKVSQLGK
Trigger: TTTCCCCAGCTGAGAGACCTTCTCAGGCTTGTTCAGAGACTTCAACTGTATTGGATTAGAAGAAGGATTCTTGAGACTGTACATCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp TTTCTAGTCCTTTCGCTTGTGGGTAATGAAATAGAAATGGGTTCGTaGATATTCCCCCTTGCCTCCTTGGGTTCTCTATCACCAAAACCA +
Preference number: 2 (lower is better)
Translates to: FLVLSLVGNEIEMGS*IFPLASLGSLSPKP
Trigger: TGGTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGAATATCAACGAACCCATTTCTATTTCATTACCCACAAGCGAAAGGACTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTATGCAATGAAGGCTTaGTACTGCCCCAAGCCGCAC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTYAMKA*YCPKPH
Trigger: GTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 2 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCAACCAGCAGCCCAATaGCAAACTCGAAGGATTGGC +
Preference number: 2 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISQPAAQ*QTRRIG
Trigger: GCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACCAGGCTCTGTCACTaGCTAAAGGAAGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTRLCH*LKEGSA
Trigger: TGCACTGCCTTCCTTTAGCCAGTGACAGAGCCTGGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAACCAGGCTCTGTCACTaGCTAAAGGAAGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVTRLCH*LKEGSA
Trigger: TGCACTGCCTTCCTTTAGCCAGTGACAGAGCCTGGT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATCTATCCAAAGAAGGTaGCTGGTTTACAAGGACATG +
Preference number: 2 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSIQRR*LVYKDM
Trigger: CATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp ATAATAAAGATTTGCAAGGCACTTAATCAGTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: IIKICKALNQSFWVV*CSLSTAILHPRPSF
Trigger: AAAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAGAATGACTGATTAAGTGCCTTGCAAATCTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCCTTCCACGGTGTTTaGCGTTTGCACCTTTCCTAC +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSFHGV*RLHLSY
Trigger: GTAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGACGGGCAGAGTGTTCTaGTTCCAAATCCGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKTGRVF*FQIRKR
Trigger: TCTCTTCCGGATTTGGAATCAGAACACTCTGCCCGT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAATCCAAAGAAACACTaGCCCCACCAAAATTTGAGA +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKNPKKH*PHQNLR
Trigger: TCTCAAATTTTGGTGGGGGCAGTGTTTCTTTGGATT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTCTTTCCCATTTGGCTaGTTACTACAGAAACAGCTT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSFPFG*LLQKQL
Trigger: AAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAAGCCTGTCCCTTCTTaGCATAGAGGCTTTGGGACA +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVKPVPS*HRGFGT
Trigger: TGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTGGGAGCCAAGACCTaGACATCCATAGTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLGAKT*TSIVFS
Trigger: GCTGAAGACTATGGATGTCCAGGTCTTGGCTCCCAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTNQGET*NYHVWP
Trigger: TGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKNQGET*NYHVWP
Trigger: TGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCCCCCTTGCCTCCTTaGGTTCTCTATCACCAAAAC +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSPLPP*VLYHQN
Trigger: GTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 90 bp CCAAGCCCATTCTCATCAAATTCAAAACGAAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAACAGCTTAGATTTTGAACTAAGCCCT +
Preference number: 2 (lower is better)
Translates to: PSPFSSNSKRRDLSH*AAYYRNSLDFELSP
Trigger: AGGGCTTAGTTCAAAATCTAAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCTTCGTTTTGAATTTGATGAGAATGGGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGCGTATAAGACTTTTTaGACCTCCACCCTGGATGGT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKAYKTF*TSTLDG
Trigger: ACCATCCAGGGTGGAGGTTCAAAAAGTCTTATACGC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGGTTTACAAGGACATaGGATACACACCCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTWFTRT*DTHPSG
Trigger: CCCACTTGGGTGTGTATCTCATGTCCTTGTAAACCA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTGGTTTACAAGGACATaGGATACACACCCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKWFTRT*DTHPSG
Trigger: CCCACTTGGGTGTGTATCTCATGTCCTTGTAAACCA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGCAGGAAAGAACAATaGGTACAGGCAGGACTCCTT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSRKEQ*VQAGLL
Trigger: AAGGAGTCCTGCCTGTACTCATTGTTCTTTCCTGCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCATCGAGGTCACCTGCTaGTCCAAACCTACTTTGGAA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTIEVTC*SKPTLE
Trigger: TTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGAT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTDSYGK*KARLVT
Trigger: GGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCATCATAACGTAAAATaGCTGATTTCTTCATGTGGT +
Preference number: 2 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESHHNVK*LISSCG
Trigger: ACCACATGAAGAAATCAGGCATTTTACGTTATGATG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTEGLCV*SKNGLL
Trigger: TAGTAACCCATTCTTGGAGCACACACAGAGTCCCTC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGTGTGCTCCAAGAATaGGTTACTAGTCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTCVLQE*VTSPAG
Trigger: TCCTGCTGGACTAGTAACCCATTCTTGGAGCACACA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGATACTTTCTGGAGGTaGAAAAAGAGGTATCAGAAT +
Preference number: 2 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKDTFWR*KKRYQN
Trigger: ATTCTGATACCTCTTTTTCCACCTCCAGAAAGTATC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGTCCAGAGGTACACTaGCCAAGAAACGTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVCPEVH*PRNVVF
Trigger: AAACACTACGTTTCTTGGTCAGTGTACCTCTGGACA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTTTATCAGAAAGTCTaGGCAGCAAGCGTGAGACTT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKFYQKV*AASVRL
Trigger: AAGTCTCACGCTTGCTGCTCAGACTTTCTGATAAAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGATACCTGGTGCAATATaGTCTGATGGGAAGAATCCA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKIPGAI*SDGKNP
Trigger: TGGATTCTTCCCATCAGATCATATTGCACCAGGTAT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTTTGTTTCATTTGGTaGAGAGAAAAGTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLCFIW*REKWAV
Trigger: CACAGCCCACTTTTCTCTGCACCAAATGAAACAAAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRSRLL*KVQSQT
Trigger: AGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCTATCCAAAGAAGGTaGCTGGTTTACAAGGACATG +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSIQRR*LVYKDM
Trigger: CATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACAGCTTTGTTTCATTTaGTGCAGAGAAAAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVQLCFI*CREKWA
Trigger: AGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAGCTTTGTTTCATTTaGTGCAGAGAAAAGTGGGCT +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQLCFI*CREKWA
Trigger: AGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGGATCTTTCCCATTTaGCTGCTTACTACAGAAACA +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGIFPI*LLTTET
Trigger: TGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTGTTGTTTTCATCTTaGCTAGCACCATCTGTACAC +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLLFSS*LAPSVH
Trigger: GTGTACAGATGGTGCTAGTCAAGATGAAAACAACAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCATGGAATAGATGTGTaGGTGTGGTATTTCAGTACT +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKHGIDV*VWYFST
Trigger: AGTACTGAAATACCACACTCACACATCTATTCCATG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGTGAGGGGACAAAATaGCTTAAGATTGTAAGACTC +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSEGTK*LKIVRL
Trigger: GAGTCTTACAATCTTAAGGCATTTTGTCCCCTCACT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTCAAATATTACAATGTaGGCTGTTAGCAGGATAGGG +
Preference number: 2 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSNITM*AVSRIG
Trigger: CCCTATCCTGCTAACAGCCCACATTGTAATATTTGA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCAAATATTACAATGTaGGCTGTTAGCAGGATAGGG +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSNITM*AVSRIG
Trigger: CCCTATCCTGCTAACAGCCCACATTGTAATATTTGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGGTTTTCTGTCCTATaGAATATATCACGGACAGGA +
Preference number: 2 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRFSVL*NISRTG
Trigger: TCCTGTCCGTGATATATTCCATAGGACAGAAAACCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTTAATCAGTCATTCTaGGTTGTTTTGTGTTCGCTT +
Preference number: 2 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLNQSF*VVLCSL
Trigger: AAGCGAACACAAAACAACCCAGAATGACTGATTAAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp AGACTCCCGTGTGGTGGCATTGAAGAGTGTCCTTCATaGGGGGACAGCTGGGCCACATACCCCGGCGGCAGC +
Preference number: 3 (lower is better)
Translates to: RLPCGGIEECPS*GDSWATYPGGS
Trigger: GCTGCCGCCGGGGTATGTGGCCCAGCTGTCCCCCCATGAAGGACACTCTTCAATGCCACCACACGGGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp GGGCCCAGGTCGCAAAGGACTCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACCTGTTCTCTAAAGCAC +
Preference number: 3 (lower is better)
Translates to: GPRSQRTPPPLC*RCRLLTCSLKH
Trigger: GTGCTTTAGAGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGGAGTCCTTTGCGACCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp GGAGGGCCCAGGTCGCAAAGGACTCCTCCTCCCCTGTaGTGCAGGTGCCGTCTCCTCACCTGTTCTCTAAAG +
Preference number: 3 (lower is better)
Translates to: GGPRSQRTPPPL*CRCRLLTCSLK
Trigger: CTTTAGAGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGGAGTCCTTTGCGACCTGGGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp AACTCTCGCTCCTCAGCACCACCGTGCAATGCGACGTaGAGTGACTCCCAGGGACACAATAGCACCACCGCC +
Preference number: 3 (lower is better)
Translates to: NSRSSAPPCNAT*SDSQGHNSTTA
Trigger: GGCGGTGGTGCTATTGTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGAGCGAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCAGTCTCACAGGGCTaGGACACCCCTCGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSVSQG*DTPRAS
Trigger: GGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp AGGCTCTGTCACTGGCTAAAGGAAGGCAGTGCAGCATaGAAGGAACCTCAGGGGAGGATGTGGCAGGGGCGA +
Preference number: 3 (lower is better)
Translates to: RLCHWLKEGSAA*KEPQGRMWQGR
Trigger: TCGCCCCTGCCACATCCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTCCTTTAGCCAGTGACAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CTCGCCCAAGGTTGCACAGCTAGTAACAACCAGGCCTaGCGGCCCATGTCCTTGCTCCTAGCTCAAGGCCTA +
Preference number: 3 (lower is better)
Translates to: LAQGCTASNNQA*RPMSLLLAQGL
Trigger: TAGGCCTTGAGCTAGGAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACTAGCTGTGCAACCTTGGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTACGCCCGCTCCAGACTaGCCACCAACCTTCATCCTC +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPATPAPD*PPTFIL
Trigger: GAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCCCGTGTGGTGGCATaGAAGAGTGTCCTTCATGGG +
Preference number: 3 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSRVVA*KSVLHG
Trigger: CCCATGAAGGACACTCTTCAATGCCACCACACGGGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CATGTCTGGCCACTGGGTAAGGCATCCTCCCGTGACTaGGACTGCTTCAGAATGGTCAGCCGGAACTCCTTC +
Preference number: 3 (lower is better)
Translates to: HVWPLGKASSRD*DCFRMVSRNSF
Trigger: GAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTaGCTGTTTACCCCAGCTTCTCATGAGAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDA*LFTPASHERSP
Trigger: GGGGCTCCTCTCATGAGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTACGCCCGCTCCAGACTaGCCACCAACCTTCATCCTC +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPTPAPD*PPTFIL
Trigger: GAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCAGTCTCACAGGGCTaGGACACCCCTCGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSVSQG*DTPRAS
Trigger: GGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp AAGCACCTGCCCCACAATCAACCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGATGTGGCATCGAGGTC +
Preference number: 3 (lower is better)
Translates to: KHLPHNQPSGST*PRCLLGCGIEV
Trigger: GACCTCGATGCCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGGGGCAGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp TGGCCACTGGGTAAGGCATCCTCCCGTGACTGGGACTaGTTCAGAATGGTCAGCCGGAACTCCTTCCTTCAT +
Preference number: 3 (lower is better)
Translates to: WPLGKASSRDWD*FRMVSRNSFLH
Trigger: ATGAAGGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp ACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTaGGATGCCTGGCTGTTTACCCCAGCTTCTCATGAG +
Preference number: 3 (lower is better)
Translates to: TRPDSCLSNSPR*DAWLFTPASHE
Trigger: CTCATGAGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GTGGCATCGAGGTCACCTGCTGCTCCAAACCTACTTTaGAAACACACACACTGGCTCGTGCCGAGGGAAGTC +
Preference number: 3 (lower is better)
Translates to: VASRSPAAPNLL*KHTHWLVPREV
Trigger: GACTTCCCTCGGCACGAGCCAGTGTGTGTGTTTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp ACCAAGGGGAGACCTGGAACTATCATGTCTGGCCACTaGGTAAGGCATCCTCCCGTGACTGGGACTGCTTCA +
Preference number: 3 (lower is better)
Translates to: TKGRPGTIMSGH*VRHPPVTGTAS
Trigger: TGAAGCAGTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CACCAAAACCAAGGGGAGACCTGGAACTATCATGTCTaGCCACTGGGTAAGGCATCCTCCCGTGACTGGGAC +
Preference number: 3 (lower is better)
Translates to: HQNQGETWNYHV*PLGKASSRDWD
Trigger: GTCCCAGTCACGGGAGGATGCCTTACCCAGTGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGGAAGTCTCTCTGTTaGAGTGGCCTCACCAGAATA +
Preference number: 3 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGKSLC*SGLTRI
Trigger: TATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGGCATGTCTCCTGTTaGCACCTTTGCATAGAAGCA +
Preference number: 3 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGHVSC*HLCIEA
Trigger: TGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCCAGGGCAACACACTaGTCAGACTTGGGAGATACA +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPRATH*SDLGDT
Trigger: TGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCACACGTGTGGACCTaGGGAACAACTATGCTTAGA +
Preference number: 3 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPHVWT*GTTMLR
Trigger: TCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp ATCAACCTTCTGGGTCTACCTGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCACCTGCTGCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: INLLGLPDHAAC*DVASRSPAAPN
Trigger: GTTTGGAGCAGCAGGTGACCTCGATGCCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTTCCACCTCACATATTaGGAGCAGGGGGTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPFHLTY*EQGVRR
Trigger: CCTCCTCACCCCCTGCTCCAAATATGTGAGGTGGAA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCAACAAGATCAAAGTTaGCAGCTCGCAGGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAQQDQS*QLAGGN
Trigger: GTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp TTGATACTGCCCCAAGCCGCACTGTGTCCAGTGTTATaGCATTGCTGCAGGTTCTGGGTAGGGCCACCCAAA +
Preference number: 3 (lower is better)
Translates to: LILPQAALCPVL*HCCRFWVGPPK
Trigger: TTTGGGTGGCCCTACCCAGAACCTGCAGCAATGTCATAACACTGGACACAGTGCGGCTTGGGGCAGTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp CATGATAAAGCAAACTCTCGCTCCTCAGCACCACCGTaGAATGCGACGTGGAGTGACTCCCAGGGACACAAT +
Preference number: 3 (lower is better)
Translates to: HDKANSRSSAPP*NATWSDSQGHN
Trigger: ATTGTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGAGCGAGAGTTTGCTTTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CTGTTCTCTAAAGCACCTGCCCCACAATCAACCTTCTaGGTCTACCTGACCACGCTGCTTGTTGGGATGTGG +
Preference number: 3 (lower is better)
Translates to: LFSKAPAPQSTF*VYLTTLLVGMW
Trigger: CCACATCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGGGGCAGGTGCTTTAGAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CCAGCAACCAGCAGCCCAATGGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGAAGCCTCCAAGGATAT +
Preference number: 3 (lower is better)
Translates to: PATSSPMANSKD*LPFGSRSLQGY
Trigger: ATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp AGGCCCATGCACAAAACTAGCCTGCCAAGGGGCTGCTaGGACCTGCCCAAGTACAGAAGAGTTGAATTTCTG +
Preference number: 3 (lower is better)
Translates to: RPMHKTSLPRGC*DLPKYRRVEFL
Trigger: CAGAAATTCAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCCTCATTCATTGTCTTaGATGCCCCAGCACAGAGGG +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCPHSLS*MPQHRG
Trigger: CCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGGAAGTCTCTCTGTTaGAGTGGCCTCACCAGAATA +
Preference number: 3 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGKSLC*SGLTRI
Trigger: TATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 3 (lower is better)
Translates to: SPEHATVLQNGVKVKELRTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGTGGCTGGGGCTGAGTaGTTGGTTAATAAAGACAGC +
Preference number: 3 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFVAGAE*LVNKDS
Trigger: GCTGTCTTTATTAACCAACAACTCAGCCCCAGCCAC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGTTCAGCCAGCAGATTaGGGCATGTCTCCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAVQPAD*GMSPVC
Trigger: GCAAACAGGAGACATGCCCAAATCTGCTGGCTGAAC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTCCACCTCACATATTaGGAGCAGGGGGTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHFHLTY*EQGVRR
Trigger: CCTCCTCACCCCCTGCTCCAAATATGTGAGGTGGAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCAGGGGTTCCCACCTTaGTCAAGACAGGACACATCT +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPQGFPP*SRQDTS
Trigger: AGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCCCGTGTGGTGGCATaGAAGAGTGTCCTTCATGGG +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSRVVA*KSVLHG
Trigger: CCCATGAAGGACACTCTTCAATGCCACCACACGGGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp ATAAAGCATTCTCCTTCACCGTGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: IKHSPSPWPARS*EVFCDCHLGKE
Trigger: CTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp TATATAGCTTGCAAAGGCCCATGCACAAAACTAGCCTaGCAAGGGGCTGCTGGGACCTGCCCAAGTACAGAA +
Preference number: 3 (lower is better)
Translates to: YIACKGPCTKLA*QGAAGTCPSTE
Trigger: TTCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp CCAACACCTAACGTTTATATAGCTTGCAAAGGCCCATaGACAAAACTAGCCTGCCAAGGGGCTGCTGGGACC +
Preference number: 3 (lower is better)
Translates to: PTPNVYIACKGP*TKLACQGAAGT
Trigger: GGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTTAGGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTATGGCTCTGGTGAATaGGTTCCAGCTTTCGTTCAA +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAYGSGE*VPAFVQ
Trigger: TTGAACGAAAGCTGGAACCAATTCACCAGAGCCATA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGGCATGTCTCCTGTTaGCACCTTTGCATAGAAGCA +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGHVSC*HLCIEA
Trigger: TGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCAACAAGATCAAAGTTaGCAGCTCGCAGGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPQQDQS*QLAGGN
Trigger: GTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCA +
Preference number: 3 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSFWVV*CSLSTA
Trigger: TGCTGTGGAAAGCGAACACAAAACAACCCAGAATGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: SPEHATVLQNGVKVKELRISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGCTGGGGCTGAGTTGTaGGTTAATAAAGACAGCCTA +
Preference number: 3 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAAGAEL*VNKDSL
Trigger: TAGGCTGTCTTTATTAACCAACAACTCAGCCCCAGC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCTGGGGCTGAGTTGTaGGTTAATAAAGACAGCCTA +
Preference number: 3 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPAGAEL*VNKDSL
Trigger: TAGGCTGTCTTTATTAACCAACAACTCAGCCCCAGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGTTTCCTTCCGCCTTTaGTTACAGCATAAAGTTGCT +
Preference number: 3 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAVSFRL*LQHKVA
Trigger: AGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAAC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp GCAAGCGTGAGACTTGTAGGTGCGTATAAGACTTTTTaGACCTCCACCCTGGATGGTAGATGCGGCTGGACT +
Preference number: 3 (lower is better)
Translates to: ASVRLVGAYKTF*TSTLDGRCGWT
Trigger: AGTCCAGCCGCATCTACCATCCAGGGTGGAGGTTCAAAAAGTCTTATACGCACCTACAAGTCTCACGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp TTGCACCTTTGCATAGAAGCAGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACCCAGGGAGCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LHLCIEADSYGK*KARLVTQGAGF
Trigger: GAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp AAGGATATTACTGTTAAGCAAGCCCACTTACACAAGTaGTTTGAGGCCAGAGGCGAGCCCAGAGCATGCGAC +
Preference number: 3 (lower is better)
Translates to: KDITVKQAHLHK*FEARGEPRACD
Trigger: GTCGCATGCTCTGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGTGGGCTTGCTTAACAGTAATATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CTCCTGTTTGCACCTTTGCATAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACTCGTGACCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: LLFAPLHRSRLL*KVQSQTRDPGS
Trigger: GCTCCCTGGGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GTAAGGCATCCTCCCGTGACTGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCCTTCATCATCAATACA +
Preference number: 3 (lower is better)
Translates to: VRHPPVTGTASE*SAGTPSFIINT
Trigger: TGTATTGATGATGAAGGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTA +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLLFAP*HRSRLL
Trigger: TAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp TTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTaGTGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCC +
Preference number: 3 (lower is better)
Translates to: FKALPITYTTFS*CSPRRAAVLTP
Trigger: GGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp TCAGTGACACTGAACACCCAGCTTTGTTTCATTTGGTaGAGAGAAAAGTGGGCTGTGTGCCTTTCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: SVTLNTQLCFIW*REKWAVCLSSL
Trigger: CAGGGAGGAAAGGCACACAGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGGGTGTTCAGTGTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp ATCCTCGATGCGAAGGCTGCAGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCACCACAGCTTTTATCA +
Preference number: 3 (lower is better)
Translates to: ILDAKAAGTLRF*AALSSAPQLLS
Trigger: TGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCCTGCAGCCTTCGCATCGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CAGCCCAATGGCAAACTCGAAGGATTGGCTTCCCTTTaGGTCCAGAAGCCTCCAAGGATATTACTGTTAAGC +
Preference number: 3 (lower is better)
Translates to: QPNGKLEGLASL*VQKPPRILLLS
Trigger: GCTTAACAGTAATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp ATGGACAACATCAACATAAAGCATTCTCCTTCACCGTaGCCTGCGAGATCCTGCGAGGTGTTCTGTGATTGC +
Preference number: 3 (lower is better)
Translates to: MDNINIKHSPSP*PARSCEVFCDC
Trigger: GCAATCACAGAACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATGCTTTATGTTGATGTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCA +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSFWVV*CSLSTA
Trigger: TGCTGTGGAAAGCGAACACAAAACAACCCAGAATGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 3 (lower is better)
Translates to: SPEHATVLQNGVKVKELRFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTATGGCTCTGGTGAATaGGTTCCAGCTTTCGTTCAA +
Preference number: 3 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPYGSGE*VPAFVQ
Trigger: TTGAACGAAAGCTGGAACCAATTCACCAGAGCCATA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 3 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCCAGGGCAACACACTaGTCAGACTTGGGAGATACA +
Preference number: 3 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPRATH*SDLGDT
Trigger: TGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGTTTCCTTCCGCCTTTaGTTACAGCATAAAGTTGCT +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCVSFRL*LQHKVA
Trigger: AGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAAC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGTTACCCACCAATGTaGACAGATACTTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHCYPPM*TDTFWR
Trigger: CCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp CACTGGCTCGTGCCGAGGGAAGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCATAAAAGACAGGTAATA +
Preference number: 3 (lower is better)
Translates to: HWLVPREVSLFE*PHQNNHKRQVI
Trigger: TATTACCTGTCTTTTATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCCTCGGCACGAGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCTCATTCATTGTCTTaGATGCCCCAGCACAGAGGG +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPHSLS*MPQHRG
Trigger: CCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 3 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESLLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 3 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGTTCAGCCAGCAGATTaGGGCATGTCTCCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRVQPAD*GMSPVC
Trigger: GCAAACAGGAGACATGCCCAAATCTGCTGGCTGAAC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAACAAATCTGCAGATTaGTCAGCCTTGCCTTCTATC +
Preference number: 3 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHNKSAD*SALPSI
Trigger: GATAGAAGGCAAGGCTGACAAATCTGCAGATTTGTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGTATGCAATGAAGGCTaGATACTGCCCCAAGCCGCA +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKVCNEG*ILPQAA
Trigger: TGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATAC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACGCCCGCTCCAGACTaGCCACCAACCTTCATCCTC +
Preference number: 3 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTPAPD*PPTFIL
Trigger: GAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 3 (lower is better)
Translates to: RDPARCSVIAILGRSLTCFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGAAGGAGTCTGACTaGCTAAGAGAACTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGKESD*LRELLV
Trigger: AACCAAGAGTTCTCTTAGCAAGTCAGACTCCTTCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp CCTTCTTGGCATAGAGGCTTTGGGACACAGGAGAGCTaGAATCCTTGTACTCTGGACAACAGACAAGATGTA +
Preference number: 3 (lower is better)
Translates to: PSWHRGFGTQES*NPCTLDNRQDV
Trigger: TACATCTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTCTATGCCAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp AGACGTATTGTCTTTAGAAGCGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTAGTCCAGCAGGAAAGA +
Preference number: 3 (lower is better)
Translates to: RRIVFRSEGLCV*SKNGLLVQQER
Trigger: TCTTTCCTGCTGGACTAGTAACCCATTCTTGGAGCACACACAGAGTCCCTCGCTTCTAAAGACAATACGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp TCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTaGGAACTGAAAGCCCATGATAAAGCAAACTCTCGC +
Preference number: 3 (lower is better)
Translates to: SRTTRSKFAARR*ELKAHDKANSR
Trigger: GCGAGAGTTTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GCAAAGCTGGAATTAGAACTCAGGTTTTCTGTCCTATaGAATATATCACGGACGGGACGACTGGCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: AKLELELRFSVL*NISRTGRLAKL
Trigger: CAGCTTTGCCAGTCGTCCCGTCCGTGATATATTCCATAGGACAGAAAACCTGAGTTCTAATTCCAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 3 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGAAGATATGCTGCATTaGAGGGCAAAAGGGAAGCGT +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKEDMLH*RAKGKR
Trigger: ACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGACACATCTCTGCATTaGCATCTTAATGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRDTSLH*HLNAPP
Trigger: TGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKADLSA*PSIQRR
Trigger: CCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp CTGAACCCTGTTCTGATAACAAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGTTCCCATTTACCGAGT +
Preference number: 3 (lower is better)
Translates to: LNPVLITKDQVM*SSQDFGSHLPS
Trigger: ACTCGGTAAATGGGAACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTTTGTTATCAGAACAGGGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp GAACAACTATGCTTAGAGATTAAGGTTTGTATGCAATaGAGGCTTGATACTGCCCCAAGCCGCACTGTGTCC +
Preference number: 3 (lower is better)
Translates to: EQLCLEIKVCMQ*RLDTAPSRTVS
Trigger: GGACACAGTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATACAAACCTTAATCTCTAAGCATAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp AGGGGTTCCCACCTTTGTCAAGACAGGACACATCTCTaGATTTGCATCTTAATGCTCCCCCATGTTAAGAAT +
Preference number: 3 (lower is better)
Translates to: RGSHLCQDRTHL*ICILMLPHVKN
Trigger: ATTCTTAACATGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTaGACAACAGACAAGATGTACAGTCTCAAGAATCCT +
Preference number: 3 (lower is better)
Translates to: ALGHRRAEILVL*TTDKMYSLKNP
Trigger: AGGATTCTTGAGACTGTACATCTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp TGCATCTTAATGCTCCCCCATGTTAAGAATGGCAACTaGCGAATAAACAACGGGCAGAGTGTTCTGATTCCA +
Preference number: 3 (lower is better)
Translates to: CILMLPHVKNGN*RINNGQSVLIP
Trigger: TGGAATCAGAACACTCTGCCCGTTGTTTATTCGCCAGTTGCCATTCTTAACATGGGGGAGCATTAAGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACACACTTGTCAGACTaGGGAGATACACAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTHLSD*GDTQKE
Trigger: TTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGACACACTTGTCAGACTaGGGAGATACACAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKTHLSD*GDTQKE
Trigger: TTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGACTTACACAAGTGCTTaGAGGCCAGAGGCGAGCCCA +
Preference number: 3 (lower is better)
Translates to: TYITNHGIRDPELEGTTKTYTSA*RPEASP
Trigger: TGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGTTACCCACCAATGTaGACAGATACTTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCYPPM*TDTFWR
Trigger: CCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp AATTGTTATAGGGAGGAACATCTGAATTTGAGGTCCTaGGTTGTTGGGAGCCAAGACCTGGACATCCATAGT +
Preference number: 3 (lower is better)
Translates to: NCYREEHLNLRS*VVGSQDLDIHS
Trigger: ACTATGGATGTCCAGGTCTTGGCTCCCAACAACTCAGGACCTCAAATTCAGATGTTCCTCCCTATAACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp ATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGTTTCTATCAATCACTA +
Preference number: 3 (lower is better)
Translates to: IISTTAFIREIP*PLCTPGFYQSL
Trigger: TAGTGATTGATAGAAACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp CCAAATCCGGAAGAGATGAAAGAGACAGCTTCCTCGTaGTGTAGAGGGGAATTCAAGGACAACAAGATCAAA +
Preference number: 3 (lower is better)
Translates to: PNPEEMKETASS*CRGEFKDNKIK
Trigger: TTTGATCTTGTTGTCCTTGAATTCCCCTCTACATCACGAGGAAGCTGTCTCTTTCATCTCTTCCGGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp CTTCTATCCAAAGAAGGTGGCTGGTTTACAAGGACATaGGATACACACCCAAGTGGGCACAACTGCATTTTT +
Preference number: 3 (lower is better)
Translates to: LLSKEGGWFTRT*DTHPSGHNCIF
Trigger: AAAAATGCAGTTGTGCCCACTTGGGTGTGTATCTCATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp CTAATACTATCAGCACTTTCCTCAGGAATTGAATGTTaGACCATTAGGAAGAGGCTGAGTCCTCTTCCGTGC +
Preference number: 3 (lower is better)
Translates to: LILSALSSGIEC*TIRKRLSPLPC
Trigger: GCACGGAAGAGGACTCAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGAGGAAAGTGCTGATAGTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp GTGTTCATGTCTACACATACCTGGTGCAATATGATCTaGTGGGAAGAATCCAATAAGCTGGACTCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: VFMSTHTWCNMI*WEESNKLDSSP
Trigger: GGGACTTGAGTCCAGCTTATTGGATTCTTCCCATCAGATCATATTGCACCAGGTATGTGTAGACATGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR GCA 72 bp ATCATAATCAAGCCAACACCTAACGTTTATATAGCTTaGAAAGGCCCATGCACAAAACTAGCCTGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: IIIKPTPNVYIA*KGPCTKLACQG
Trigger: CCCTTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTTAGGTGTTGGCTTGATTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGACGGCTGTGTTTGCATaGAACAAATCTGCAGATTTG +
Preference number: 3 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKTAVFA*NKSADL
Trigger: CAAATCTGCAGATTTGTTCAATGCAAACACAGCCGT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp GTCAGAGATCGTAGCCAGCAAACAATGTCTTTACACTaGAAAATGCCACACAGCTTAATGGATTCATGTCAC +
Preference number: 3 (lower is better)
Translates to: VRDRSQQTMSLH*KMPHSLMDSCH
Trigger: GTGACATGAATCCATTAAGCTGTGTGGCATTTTCCAGTGTAAAGACATTGTTTGCTGGCTACGATCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGGAAGTCTCTCTGTTaGAGTGGCCTCACCAGAATA +
Preference number: 3 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGKSLC*SGLTRI
Trigger: TATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCTGTGATTGCCATCTaGGGAAGGAGTCTGACTTGC +
Preference number: 3 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSVIAI*GRSLTC
Trigger: GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp AGGTTTTCTGTCCTATGGAATATATCACGGACAGGATaGCTGGCAAAGCTGGAATTAGAACTCAGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: RFSVLWNISRTG*LAKLELELRFS
Trigger: AGAAAACCTGAGTTCTAATTCCAGCTTTGCCAGTCATCCTGTCCGTGATATATTCCATAGGACAGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 3 (lower is better)
Translates to: SAVANDIDGCVCIEQICRFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 3 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 3 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 3 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 3 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGAAGATATGCTGCATTaGAGGGCAAAAGGGAAGCGT +
Preference number: 3 (lower is better)
Translates to: TYITNHGIRDPELEGTTKEDMLH*RAKGKR
Trigger: ACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGGAAGGAGTCTGACTaGCTAAGAGAACTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGKESD*LRELLV
Trigger: AACCAAGAGTTCTCTTAGCAAGTCAGACTCCTTCCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTADLSA*PSIQRR
Trigger: CCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACCAGCTTTGTTTCATTaGGTGCAGAGAAAAGTGGGC +
Preference number: 3 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVPALFH*VQRKVG
Trigger: GCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCA +
Preference number: 3 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSFWVV*CSLSTA
Trigger: TGCTGTGGAAAGCGAACACAAAACAACCCAGAATGA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTA +
Preference number: 3 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLLFAP*HRSRLL
Trigger: TAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAAC +
Preference number: 3 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRDLSH*AAYYRN
Trigger: GTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp AATACAAACAGAACTCTGAGATTTTATCAGAAAGTCTaGGCAGCAAGCGTGAGACTTGTAGGTGCGTATAAG +
Preference number: 3 (lower is better)
Translates to: NTNRTLRFYQKV*AASVRLVGAYK
Trigger: CTTATACGCACCTACAAGTCTCACGCTTGCTGCTCAGACTTTCTGATAAAATCTCAGAGTTCTGTTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp AAGAACATAATAGACTTCAAGTTGAAGGCTAATTTATaGCAAACCAGGCCAGATTCCTGCCTGTCTAATTCC +
Preference number: 3 (lower is better)
Translates to: KNIIDFKLKANL*QTRPDSCLSNS
Trigger: GGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATAAATTAGCCTTCAACTTGAAGTCTATTATGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CCA 72 bp ATAAGCTGTTACCCACCAATGTTGACAGATACTTTCTaGAGGTGGAAAAAGAGGTATCAGAATCCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: ISCYPPMLTDTF*RWKKRYQNPKK
Trigger: TTTCTTTGGATTCTGATACCTCTTTTTCCACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACAGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR TCA 72 bp TCTAGCACAATGTCTTCATTTTATAGGTTAGAAAACTaGGTTCTGGAGGAGTTAGGTAATATATCACGGACG +
Preference number: 3 (lower is better)
Translates to: SSTMSSFYRLEN*VLEELGNISRT
Trigger: CGTCCGTGATATATTACCTAACTCCTCCAGAACTCAGTTTTCTAACCTATAAAATGAAGACATTGTGCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCGCCCGCGCCACCCTaGAGCAGCTCCGAGATGCGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRAPAPP*SSSEMR
Trigger: GCGCATCTCGGAGCTGCTGCAGGGTGGCGCGGGCGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGCCTCCGCGGGGGCGTaGTCTTGCTGTAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCASAGA*SCCRAT
Trigger: CGTCGCCCTACAGCAAGATCACGCCCCCGCGGAGGC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCCTGGCCCACCGCCTaGGGCAGGGACTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPWPTA*GRDLVE
Trigger: CTCCACCAAGTCCCTGCCGCAGGCGGTGGGCCAGGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGCGCCCGCGCCACCCTaGAGCAGCTCCGAGATGCGC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAAPAPP*SSSEMR
Trigger: GCGCATCTCGGAGCTGCTGCAGGGTGGCGCGGGCGC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCGCTCGTGGAGTCCTaGGCCGAGGACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSLVES*AEDALP
Trigger: CGGCAGCGCGTCCTCGGCGCAGGACTCCACGAGCGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGCCTGCTTTGGGGGTaGCGGTGGGGGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGLLWG*RWGPPA
Trigger: AGCCGGAGGCCCCCACCGCCACCCCCAAAGCAGGCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGCACGGGGCTCTGGGTaGCCAAACCGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCARGSG*PNRAGP
Trigger: TGGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACCCCGGCGGCAGCATaGAGGCCCCAGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTPAAA*RPQGQW
Trigger: CCACTGTCCCTGGGGCCTCCATGCTGCCGCCGGGGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCCTCCGCGGGGGCGTaGTCTTGCTGTAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGASAGA*SCCRAT
Trigger: CGTCGCCCTACAGCAAGATCACGCCCCCGCGGAGGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCAGGGGGCTGCTGGTaGCGCTGCCGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSGGCW*RCRWHC
Trigger: ACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGTTGGTTCAGGGGGCTaGTGGTGCCGCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCVGSGG*WCRCRW
Trigger: CCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAAC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCCTGGCCCACCGCCTaGGGCAGGGACTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPWPTA*GRDLVE
Trigger: CTCCACCAAGTCCCTGCCGCAGGCGGTGGGCCAGGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGGGAGGCGCTGTGCTaGCTACTGCTGCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGEALC*LLLPGT
Trigger: CGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGCTGCTCTGGAGGCTaGGGCTCTGCACGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGCSGG*GSARVG
Trigger: CCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAGCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGCACGGGGCTCTGGGTaGCCAAACCGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRARGSG*PNRAGP
Trigger: TGGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGTTCAGGGGGCTGCTaGTGCCGCTGCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGSGGC*CRCRWH
Trigger: GTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCGGAGATCTTGGACTaGCCGGCCTTGGGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRAEILD*PALGEA
Trigger: GGCCTCGCCCAAGGCCGGCCAGTCCAAGATCTCCGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCAGGGTGGGGATGTTaGAGAGCGGTGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPGWGC*RAVAGS
Trigger: GCTCCCCGCCACCGCTCTCCAACATCCCCACCCTGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGAGCCCTGCGAGGCTaGGACACTGCAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGALRG*DTAGGR
Trigger: CCTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGCGGAAACCCGGACTaGGAAACGGGCGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGGNPD*ETGAGL
Trigger: AAGACCGGCGCCCGTTTCTCAGTCCGGGTTTCCGCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCGGGACGCTCCTGGGTaGGGCCGGGCTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPRDAPG*GRAGAV
Trigger: CACAGCCCCAGCCCGGCCTCACCCAGGAGCGTCCCG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCCGCTGGCACTGTGCTaGGGGCTGGCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGPLALC*GLARFF
Trigger: GAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGTTTCTTCGGGGTCTTaGGGCTCCGGCACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRVSSGS*GSGTCR
Trigger: GCGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAAC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCAGCTGGGTGGGCCTaGGCATGCGGCCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSAGWA*ACGLLR
Trigger: GCGAAGAAGGCCGCATGCGCAGGCCCACCCAGCTGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGTGCTGGCTACTGCTaGCCGGGACGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCCAGYC*PGRSWV
Trigger: CACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGTGGGGAGGCGCTGTaGTGGCTACTGCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSGEAL*WLLLPG
Trigger: CCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCATGGGCCTGGGCTTaGCTTCCACGAAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPWAWA*LPRSRR
Trigger: CCTGCGGCTTCGTGGAAGGCAAGCCCAGGCCCATGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCGCGCGGGGCATGGTaGCGTCCTTGCCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPRGAW*RPCPRA
Trigger: TGCACGCGGGCAAGGACGGCACCATGCCCCGCGCGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTTGCCCCCGCTGCTTaGCTTAACCGGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLAPAA*LNRGPL
Trigger: CAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGGGCTCTGCACGAGTaGGGAGGCGCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGALHE*GGAVLA
Trigger: AGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGGCTGCTCTGGAGGCTaGGGCTCTGCACGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGGCSGG*GSARVG
Trigger: CCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAGCC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCTCCTCCTGCCGGCTaGCCTTCTGAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRAPPAG*PSERPW
Trigger: CCAGGGCCTTTCAGAAGGCCAGCCGGCAGGAGGAGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGGAAGGCGGCTGGTTaGTTCAGGGGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGKAAG*FRGLLV
Trigger: CACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCCCCGCGCGGGGCATaGTGCCGTCCTTGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSPRGA*CRPCPR
Trigger: ACGCGGGCAAGGACGGCACCATGCCCCGCGCGGGGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTACCCCGGCGGCAGCATaGAGGCCCCAGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFTPAAA*RPQGQW
Trigger: CCACTGTCCCTGGGGCCTCCATGCTGCCGCCGGGGT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTGTGGAAGTCTCGCTaGCCACGCAGGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLWKSR*PRRSPA
Trigger: CGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp ACAGCTAGTAACAACCAGGCCTGGCGGCCCATGTCCTaGCTCCTAGCTCAAGGCCTAGCCCCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TASNNQAWRPMS*LLAQGLAPPCL
Trigger: GAGGCAGGGAGGGGCTAGGCCTTGAGCTAGGAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACTAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGGCGGAAACCCGGACTaGGAAACGGGCGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGGGNPD*ETGAGL
Trigger: AAGACCGGCGCCCGTTTCTCAGTCCGGGTTTCCGCC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCAGGCAGTCCCTTTCTaGCTTGCCGGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCQAVPF*LAGCSL
Trigger: GAGGCTGCAGCCGGCAAGTCAGAAAGGGACTGCCTG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGGCATTCGTAGTGGCTaGCTGTCGCCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGGIRSG*LSPCPA
Trigger: CGCTGGGCAGGGCGACAGTCAGCCACTACGAATGCC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCGAGGAGCCGAGCGCTaGGCCCGCGCCCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPRGAER*ARALRS
Trigger: ACTCCTGAGGGCGCGGGCTCAGCGCTCGGCTCCTCG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGGGACTGGCCGTCCTaGAGGCTGCCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGDWPS*RLPVAT
Trigger: GGTGGCCACGGGCAGCCTGCAGGACGGCCAGTCCCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAAAGGCAGCCTTCTCTaGGGTGGGGGCCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAKGSLL*GGGPQL
Trigger: GAGCTGCGGGCCCCCACCGCAGAGAAGGCTGCCTTT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAAAGGCAGCCTTCTCTaGGGTGGGGGCCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRKGSLL*GGGPQL
Trigger: GAGCTGCGGGCCCCCACCGCAGAGAAGGCTGCCTTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCTGTTGGTGGCTCCTaGGGGAGGCAATGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPVGGS*GRQWRH
Trigger: ATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCAGCTGGGTGGGCCTaGGCATGCGGCCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSAGWA*ACGLLR
Trigger: GCGAAGAAGGCCGCATGCGCAGGCCCACCCAGCTGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGCCTCTCCTGCCTCTaGGGGCCGGCTGTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSLSCL*GPAVAP
Trigger: CGGGGCGACAGCCGGCCCGCAGAGGCAGGAGAGGCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGTGGGGAGGCGCTGTaGTGGCTACTGCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSGEAL*WLLLPG
Trigger: CCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCCGCGCGGGGCATGGTaGCGTCCTTGCCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLPRGAW*RPCPRA
Trigger: TGCACGCGGGCAAGGACGGCACCATGCCCCGCGCGG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCCCCCTCGTCGCCGCTaGAGGCGCTCCACGTCATCG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPPPRRR*RRSTSS
Trigger: CGATGACGTGGAGCGCCTGCAGCGGCGACGAGGGGG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCCCCTCGTCGCCGCTaGAGGCGCTCCACGTCATCG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPPRRR*RRSTSS
Trigger: CGATGACGTGGAGCGCCTGCAGCGGCGACGAGGGGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGCACATGGCCTCCTTaGTGGCACCCCCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSTWPP*WHPLVA
Trigger: GGCGACGAGGGGGTGCCAGCAAGGAGGCCATGTGCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAGCCTGCCAAGGGGCTaGTGGGACCTGCCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSLPRG*WDLPKY
Trigger: GTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGAAGCGTCCCCCGGCTaGAGGGGGCTGGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPEASPG*RGLALS
Trigger: GCTGAGAGCCAGCCCCCTGCAGCCGGGGGACGCTTC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAWKGLS*VGLRMR
Trigger: CCGCATGCGCAGGCCCACCCAGCTGAGACCCTTCCA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGTCCACCGTGGCCCTaGTGTGGAAGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGPPWP*CGRVSA
Trigger: AGCTGAGACCCTTCCACACCAGGGCCACGGTGGACC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCTTGCCCCCGCTGCTTaGCTTAACCGGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALAPAA*LNRGPL
Trigger: CAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGGAGCCCATGGGCCTaGGCTTGCCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGSPWA*ACLPRS
Trigger: GCTTCGTGGAAGGCAAGCCCAGGCCCATGGGCTCCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTGCTCCCTGCGTCCTaGGCCTTCTCATCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLLPAS*AFSSRL
Trigger: GAGCCTGGATGAGAAGGCCCAGGACGCAGGGAGCAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGGGCCTCCGGCTCTTaGATGTTCCGGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGASGS*MFRGLM
Trigger: CATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGATGCACGGGGCTCTaGGTGGCCAAACCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGCTGL*VAKPGR
Trigger: CCTGCCCGGTTTGGCCACCCAGAGCCCCGTGCATCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCCCCGCGCGGGGCATaGTGCCGTCCTTGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSPRGA*CRPCPR
Trigger: ACGCGGGCAAGGACGGCACCATGCCCCGCGCGGGGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCACGGCGGAGATCTTaGACTGGCCGGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSRRRS*TGRPWA
Trigger: CGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGATGTTGGAGAGCGGTaGCGGGGAGCAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFDVGER*RGAGRG
Trigger: GCCTCGCCCTGCTCCCCGCCACCGCTCTCCAACATC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCAAAGGCCCAGTCTCTaGGCTGCTGGAGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCQRPSL*AAGAHP
Trigger: TGGGTGGGCTCCAGCAGCCCAGAGACTGGGCCTTTG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGGACTGGTGGCCATCTaGAGGCTGACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRGLVAI*RLTLAW
Trigger: CCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGGGCCCGATGTAGATaGCGGTGTCGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCWARCR*RCRRTA
Trigger: AGCAGTCCTGCGACACCGTCATCTACATCGGGCCCA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGCCCTCGTTGTCGGTaGGCTCCTTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGPRCR*APCQRG
Trigger: CCCTCTCTGACAAGGAGCTCACCGACAACGAGGGCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGGCCTTGCAGAAGTTaGCACGGCTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGPCRS*HGSPGA
Trigger: AGCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGCGTGCAACATCTCTaGAGTCCTGGGGAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGVQHL*SPGERG
Trigger: CCCCCGCTCCCCAGGACTTCAGAGATGTTGCACGCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGGCCATCTGGAGGCTaGCCTTGGCCTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGWPSGG*PWPGGL
Trigger: CAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGGACTGGCCGTCCTaGAGGCTGCCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGDWPS*RLPVAT
Trigger: GGTGGCCACGGGCAGCCTGCAGGACGGCCAGTCCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGGGTGGGCCTGCGCATaGGGCCTTCTTCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAGWACA*GLLRRS
Trigger: GCTCCTGCGAAGAAGGCCGCATGCGCAGGCCCACCC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGGCTGCAGCCTCTCCTaGCTCTGCGGGCCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLGCSLS*LCGPAV
Trigger: GACAGCCGGCCCGCAGAGGCAGGAGAGGCTGCAGCC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCGGGGGCCTCTGCTTaGCTGCTCTGGCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPGASA*LLWPKL
Trigger: CAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTTAACCGGGGGCCTCTaGTTGCCTGCTCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLTGGL*LPALAQ
Trigger: TTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGTACGCACCTCGGGCTaGAGCAAGGACTCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRVRTSG*SKDSLD
Trigger: GTCTAGGGAGTCCTTGCTGCAGCCCGAGGTGCGTAC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGCTCCAGTGGCTGCTaGACCGTCACCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSSSGC*TVTIVV
Trigger: CACCACGATGGTGACGGTGCAGCAGCCACTGGAGCT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAGAGCGTCTGCTCCCTaGGTCCTGGGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRASAP*VLGLLI
Trigger: GATGAGAAGGCCCAGGACGCAGGGAGCAGACGCTCT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCCTGCCCAGCGAGTTaGTTCTGCTGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPCPAS*FCWPAA
Trigger: AGCAGCTGGCCAGCAGAAGCAACTCGCTGGGCAGGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGCATGGTGCCGTCCTTaGCCGCGTGCAGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPAWCRP*PRAAGS
Trigger: GCTCCCGGCTGCACGCGGGCAAGGACGGCACCATGC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCATGGTGCCGTCCTTaGCCGCGTGCAGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHAWCRP*PRAAGS
Trigger: GCTCCCGGCTGCACGCGGGCAAGGACGGCACCATGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCCCTGTGCTGCAGGTaGCGTCTCCTCACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPLCCR*RLLTCS
Trigger: AGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGCGAGCCCAGAGCATaGGACTGTCCTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGEPRA*DCPAEW
Trigger: CCATTCTGCAGGACAGTCGCATGCTCTGGGCTCGCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTTCCCCACGCTGCGATaGCTGGCTGTTTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRFPTLR*LAVYPS
Trigger: GCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGCCTGCCAAGGGGCTaGTGGGACCTGCCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSLPRG*WDLPKY
Trigger: GTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTACACGCCCGGGGACTaGCCGTCCTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLYTPGD*PSCRLP
Trigger: GGGCAGCCTGCAGGACGGCCAGTCCCCGGGCGTGTA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGACCGTGGCCCTGGTGTaGAAGGGTCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRTVALV*KGLSWV
Trigger: CACCCAGCTGAGACCCTTCCACACCAGGGCCACGGT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGTCAGGGTCCACCGTaGCCCTGGTGTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSQGPP*PWCGRV
Trigger: GACCCTTCCACACCAGGGCCACGGTGGACCCTGACT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTGGACAGGTGAGCGATaGGGAAGTCAGGGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRWTGER*GSQGPP
Trigger: CGGTGGACCCTGACTTCCCCATCGCTCACCTGTCCA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGTAGTCGGGGTCGCTaGACAGGTGAGCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSSRGR*TGERWG
Trigger: TCCCCATCGCTCACCTGTCCAGCGACCCCGACTACT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGGGAGGCGCTGTGCTaGCTACTGCTGCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGEALC*LLLPGT
Trigger: CGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTCTCCCGGCTGCTCTaGAGGCTGGGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLSRLL*RLGLCT
Trigger: CGTGCAGAGCCCCAGCCTCCAGAGCAGCCGGGAGAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTGCTCCCTGCGTCCTaGGCCTTCTCATCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLLPAS*AFSSRL
Trigger: GAGCCTGGATGAGAAGGCCCAGGACGCAGGGAGCAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTTTGGGGGTGGCGGTaGGGGCCTCCGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLWGWR*GPPALG
Trigger: TCCAAGAGCCGGAGGCCCCCACCGCCACCCCCAAAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCTCCTGCTCTGCTCTaGTCTCAGCATTCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRAPALL*SQHSRG
Trigger: GCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCCGCTAGGCTCGTCTaGGAGGCCCGCCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKAARLV*EARREG
Trigger: GCCTTCCCGGCGGGCCTCCCAGACGAGCCTAGCGGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATCCCCGCGCGGGGCATaGTGCCGTCCTTGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSPRGA*CRPCPR
Trigger: ACGCGGGCAAGGACGGCACCATGCCCCGCGCGGGGA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGGACTGGCCGGCCTTaGGCGAGGCCCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGWTGRP*ARPRSW
Trigger: CCAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCGCGCGCTCTGGGGCTaGCCAGGAGGAGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRALWG*PGGVCS
Trigger: TGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGGGCGCTGCGGGCTTaGTGGGCGAGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRALRA*WASRLH
Trigger: ATGAAGTCTGCTCGCCCACCAAGCCCGCAGCGCCCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTGTGTAGTTGGAGGTaGCACAGGGGGCGGGCACAA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLCSWR*HRGRAQ
Trigger: TTGTGCCCGCCCCCTGTGCCACCTCCAACTACACAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTGTGTAGTTGGAGGTaGCACAGGGGGCGGGCACAA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLCSWR*HRGRAQ
Trigger: TTGTGCCCGCCCCCTGTGCCACCTCCAACTACACAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTGACCTTGGCCTGGTaGGTTGGGGACCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLTLAW*VGDPLF
Trigger: GAAGAGCGGGTCCCCAACCCACCAGGCCAAGGTCAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGAGCCCTGCGAGGCTaGGACACTGCAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGALRG*DTAGGR
Trigger: CCTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGCCATCTGCCCCGTTaGCCACAGACTGGATCACCT +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSHLPR*PQTGSP
Trigger: AGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGGCGGAAACCCGGACTaGGAAACGGGCGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCGGNPD*ETGAGL
Trigger: AAGACCGGCGCCCGTTTCTCAGTCCGGGTTTCCGCC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTGGGCCCGATGTAGATaGCGGTGTCGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRWARCR*RCRRTA
Trigger: AGCAGTCCTGCGACACCGTCATCTACATCGGGCCCA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGCCCTCGTTGTCGGTaGGCTCCTTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGPRCR*APCQRG
Trigger: CCCTCTCTGACAAGGAGCTCACCGACAACGAGGGCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGTTTCTTCGGGGTCTTaGGGCTCCGGCACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAVSSGS*GSGTCR
Trigger: GCGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAAC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCGAGATCAATGAGATaGAGGCGGCTGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPRSMR*RRLRPP
Trigger: TGGAGGTCGCAGCCGCCTGCATCTCATTGATCTCGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCAGCTGGGTGGGCCTaGGCATGCGGCCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSAGWA*ACGLLR
Trigger: GCGAAGAAGGCCGCATGCGCAGGCCCACCCAGCTGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTCGCCCCGGGTCTTCTaGAGGGCTGGCACGATAGGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASPRVF*RAGTIG
Trigger: CCCTATCGTGCCAGCCCTGCAGAAGACCCGGGGCGA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGCTGGGCTCCTCGCTaGCGTCGATGCAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAACWAPR*RRCSPA
Trigger: GGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCGGGGGCCTCTGCTTaGCTGCTCTGGCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPGASA*LLWPKL
Trigger: CAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAAACTGTGGCACGACTaGTCACCCTCACTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGKLWHD*SPSLPA
Trigger: CGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGACGCTTTTGTTGGGATaGACGGGGCTCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRTLLLG*TGLWVA
Trigger: GGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCGAGCCAGAACACAGTaGTTGGGGGAAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRARTQ*LGEATF
Trigger: GAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGCTCG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCAGGGGGCTGCTGGTaGCGCTGCCGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSGGCW*RCRWHC
Trigger: ACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGTTGGTTCAGGGGGCTaGTGGTGCCGCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPVGSGG*WCRCRW
Trigger: CCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAAC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGAGCTTGCTGCTGCTaGTGGCGTCCTTCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRRACCC*WRPSSC
Trigger: GCAAGACGAAGGACGCCAGCAGCAGCAGCAAGCTCT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCGCTCTCGTAGCCGCTaGTGCCGCCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAARSRSR*CRRCGR
Trigger: TCTACCACAGCGGCGGCAGCAGCGGCTACGAGAGCG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCAAGGCCCCTCGGGCTaGTCCGCAAGGGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLQGPSG*SARGHP
Trigger: TGGATGGCCCCTTGCGGAGCAGCCCGAGGGGCCTTG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCGTCACACACTCCAGTaGCTCCAGGTACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRHTLQ*LQVLQG
Trigger: TCCCTGGAGTACCTGGAGGCACTGGAGTGTGTGACG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCGCCCGCTCCAGACTTaGCACCAACCTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRRPLQT*HQPSSS
Trigger: TGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCCTCAGCACCACCGTaGAATGCGACGTGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSSAPP*NATWSD
Trigger: GTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGTGCCTTTCCTCCCTaGCCAGACTCCCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCAFPP*PDSRVV
Trigger: CACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTGCACAAAACTAGCCTaGCAAGGGGCTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRCTKLA*QGAAGT
Trigger: GGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCAAGGCTGCTGGGTTTaGTGCCGTGCTTGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRQGCWV*CRACWR
Trigger: TCGCCAACAAGCACGGCAGCAAACCCAGCAGCCTTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCTGCGTGCCGCAGATaGGGTCCTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGAACRR*GPHRGT
Trigger: TGTACCTCTGTGAGGACCCCATCTGCGGCACGCAGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCCCGCCGGACGAGCTaGATGTGTACTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPRRTS*MCTSSS
Trigger: AGAAGACGAAGTACACATCCAGCTCGTCCGGCGGGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGATAGGGACAAAGTCTaGGGGGCCCTCGTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCDRDKV*GALVVG
Trigger: ACCGACAACGAGGGCCCCCCAGACTTTGTCCCTATC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCGAAAGGAAAGCTGCTaGGCTCCTCGCTGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRKESC*APRCRR
Trigger: TCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCAGGGCCTTCTCTGTTaGTCAGCTGACCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRQGLLC*SADLRT
Trigger: GGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTTTGGGGGTGGCGGTaGGGGCCTCCGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLWGWR*GPPALG
Trigger: TCCAAGAGCCGGAGGCCCCCACCGCCACCCCCAAAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGCCTGCTTTGGGGGTaGCGGTGGGGGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGLLWG*RWGPPA
Trigger: AGCCGGAGGCCCCCACCGCCACCCCCAAAGCAGGCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCTCCTGCTCTGCTCTaGTCTCAGCATTCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGAPALL*SQHSRG
Trigger: GCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAGGGGGAGTCCCTTTaGGCCGAGCCAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELREGESL*AEPEHS
Trigger: ACTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCTGGCCCGGTTCTTCTaGTCCAGGCTGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALARFF*SRLDFR
Trigger: CCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCACTGTGCTGAGGGCTaGCCCGGTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAHCAEG*PGSSGP
Trigger: TGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGTTCAGGGGGCTGCTaGTGCCGCTGCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGSGGC*CRCRWH
Trigger: GTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGGGAAGGCGGCTGGTTaGTTCAGGGGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCGKAAG*FRGLLV
Trigger: CACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGGGAAGGCGGCTGGTTaGTTCAGGGGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAGKAAG*FRGLLV
Trigger: CACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCGCCGGGAAGGCGGCTaGTTGGTTCAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRREGG*LVQGAA
Trigger: AGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCGCCGGGAAGGCGGCTaGTTGGTTCAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHRREGG*LVQGAA
Trigger: AGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCTTGCTGCTGCTGCTaGCGTCCTTCGTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFACCCC*RPSSCR
Trigger: GCGGCAAGACGAAGGACGCCAGCAGCAGCAGCAAGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCGAGTTGCTTCTGCTaGCCAGCTGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGASCFC*PAAPAW
Trigger: CCAAGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGCGGAGATCTTGGACTaGCCGGCCTTGGGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLAEILD*PALGEA
Trigger: GGCCTCGCCCAAGGCCGGCCAGTCCAAGATCTCCGC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGAAGAGTGTCCTTCATaGGGGGACAGCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTREECPS*GDSWAT
Trigger: TGTGGCCCAGCTGTCCCCCCATGAAGGACACTCTTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTTCCGTGCAAGCCGGTaGGCGTGGATTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAFRASR*AWISKP
Trigger: GGGCTTGGAAATCCACGCCCACCGGCTTGCACGGAA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTGCCAAGGGGCTGCTaGGACCTGCCCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLPRGC*DLPKYR
Trigger: TCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCCAGGGTGGGGATGTTaGAGAGCGGTGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLPGWGC*RAVAGS
Trigger: GCTCCCCGCCACCGCTCTCCAACATCCCCACCCTGG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCAGTCTCTGGGCTGCTaGAGCCCACCCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPQSLGC*SPPTCR
Trigger: CCGGCACGTGGGTGGGCTCCAGCAGCCCAGAGACTG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCACCGATGTGCCTGTaGAAGTCTCGCTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPPMCL*KSRWPR
Trigger: GCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAGATGGCACAGGGAATaGTGCCCAGGTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRWHRE*CPGSAW
Trigger: CCATGCAGAACCTGGGCATCATTCCCTGTGCCATCT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCCATCTCAGACAGGATaGGCAAGTTGTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRPSQTG*ASCRGW
Trigger: CCAGCCCCGACAACTTGCTCATCCTGTCTGAGATGG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCGTGTTGGAGATGGTaGCCATGGCCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPCWRW*PWPCSL
Trigger: CAGTGAGCAAGGCCATGGTCACCATCTCCAACACGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGCCGGCTGGCCTTCTaGAAGGCCCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPCRLAF*KALGRL
Trigger: CAGCCTTCCCAGGGCCTTTCAGAAGGCCAGCCGGCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTWWRS*GFWWWR
Trigger: CCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGCTCCTGTTCCTGCTaGGGGACTGCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSSCSC*GTAWTR
Trigger: CCTGGTCCACGCAGTCCCTCAGCAGGAACAGGAGCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGTCTCTGAACAAGCCTaGGAAGGTCTCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRVSEQA*EGLSAG
Trigger: CCCAGCTGAGAGACCTTCTCAGGCTTGTTCAGAGAC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCCCACTGAAGCTGGTTaGAAAGAGCGGTGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGPTEAG*KERWFG
Trigger: GCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCTCTGCCACGGTGCCTaGACACACTTCAGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLCHGA*THFSLR
Trigger: TCTCAGGCTGAAGTGTGTGCAGGCACCGTGGCAGAG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGACTGGATCACCTCTaGCACGGTGCCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARLDHL*HGACTH
Trigger: GTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGAACACGCAGCCATCTaGCCCGTTGACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAEHAAI*PVDHRL
Trigger: CAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGGACTGGCCGTCCTaGAGGCTGCCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGDWPS*RLPVAT
Trigger: GGTGGCCACGGGCAGCCTGCAGGACGGCCAGTCCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGGTTCTGCAGCTGCGTaGCGCAGATGGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAGSAAA*RRWGPH
Trigger: GTGAGGACCCCATCTGCGGCACGCAGCTGCAGAACC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAAAGGCAGCCTTCTCTaGGGTGGGGGCCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLKGSLL*GGGPQL
Trigger: GAGCTGCGGGCCCCCACCGCAGAGAAGGCTGCCTTT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCTCGCTGCCGTCGATaGAGTCCAGCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPRCRR*SPASPA
Trigger: TGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCCTCGCTGCCGTCGATaGAGTCCAGCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPPRCRR*SPASPA
Trigger: TGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCATGGGCCTGGGCTTaGCTTCCACGAAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPWAWA*LPRSRR
Trigger: CCTGCGGCTTCGTGGAAGGCAAGCCCAGGCCCATGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCGTCACCATCGTGGTaGTCAGGATCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPSPSW*SGSPSW
Trigger: CCAAGAAGGAGATCCTGAGCACCACGATGGTGACGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGAGCGTCTGCTCCCTaGGTCCTGGGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRASAP*VLGLLI
Trigger: GATGAGAAGGCCCAGGACGCAGGGAGCAGACGCTCT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTGTACCCCTCGCAGCTaGTCAGATTGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRCTPRS*SDWPCW
Trigger: CCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGTACCCCTCGCAGCTaGTCAGATTGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCTPRS*SDWPCW
Trigger: CCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTACGCTTTTGTTGGGATaGACGGGGCTCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFTLLLG*TGLWVA
Trigger: GGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGTTGGTTCAGGGGGCTaGTGGTGCCGCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGVGSGG*WCRCRW
Trigger: CCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAAC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGCATGGTGCCGTCCTTaGCCGCGTGCAGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDAWCRP*PRAAGS
Trigger: GCTCCCGGCTGCACGCGGGCAAGGACGGCACCATGC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCGCGCGGGGCATGGTaGCGTCCTTGCCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPRGAW*RPCPRA
Trigger: TGCACGCGGGCAAGGACGGCACCATGCCCCGCGCGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTGGCCAGGAGGAGTCTaGTCACGGCGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFWPGGV*SRRRSW
Trigger: CCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTTCCTGCTGAGGGACTaGGTGGACCAGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAFLLRD*VDQGVC
Trigger: GCACACGCCCTGGTCCACGCAGTCCCTCAGCAGGAA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCTCGTAGCCGCTGCTaGCGCCGCTGTGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSRSRC*RRCGRT
Trigger: TGTTCTACCACAGCGGCGGCAGCAGCGGCTACGAGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCGCTCGTGGAGTCCTaGGCCGAGGACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSLVES*AEDALP
Trigger: CGGCAGCGCGTCCTCGGCGCAGGACTCCACGAGCGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGCCGCCCACGGAGCTaGTGTTCTCGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAACRPRS*CSRSWS
Trigger: ACTCCACGAGCGAGAACAGCAGCTCCGTGGGCGGCA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCGTCACACACTCCAGTaGCTCCAGGTACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARHTLQ*LQVLQG
Trigger: TCCCTGGAGTACCTGGAGGCACTGGAGTGTGTGACG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSSGRS*FPGQHT
Trigger: AGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGGAGGCAAGCCGAATaGCACTCCCCTCGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRRRQAE*HSPRKD
Trigger: ATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCCACCAGGCGGGCGTTaGAGTTCTCGCACCAGACGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLPPGGR*SSRTRR
Trigger: GCGTCTGGTGCGAGAACTGCAACGCCCGCCTGGTGG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCGTTGACCACAGACTaGATCACCTCTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPLTTD*ITSATV
Trigger: CACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTATGCAATCTGGATGGTaGACAGGGTCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCMQSGW*TGSPRS
Trigger: GCTACGCGGAGACCCTGTCCACCATCCAGATTGCAT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGTCCACCGTGGCCCTaGTGTGGAAGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGPPWP*CGRVSA
Trigger: AGCTGAGACCCTTCCACACCAGGGCCACGGTGGACC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGTCAGGGTCCACCGTaGCCCTGGTGTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSQGPP*PWCGRV
Trigger: GACCCTTCCACACCAGGGCCACGGTGGACCCTGACT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGGGAGGCGCTGTGCTaGCTACTGCTGCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGEALC*LLLPGT
Trigger: CGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGGCTCTGCACGAGTaGGGAGGCGCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGALHE*GGAVLA
Trigger: AGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGGGCTCTGCACGAGTaGGGAGGCGCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGALHE*GGAVLA
Trigger: AGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGTACTCCGAGGTCTTaGACAGGCTGGCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCTPRS*TGWRCP
Trigger: TGGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCTGGGAAGGAGAGCTaGGTGGCTTGTACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSGKES*VACTPR
Trigger: CCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCACCGTCACCATCGTaGTGCTCAGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRAPSPS*CSGSPS
Trigger: AGAAGGAGATCCTGAGCACCACGATGGTGACGGTGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGACGGGGGCCGTGCTaGAGTAGCACTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRRGPC*SSTPGP
Trigger: AGGACCTGGAGTGCTACTCCAGCACGGCCCCCGTCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTGCTCCCTGCGTCCTaGGCCTTCTCATCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLLPAS*AFSSRL
Trigger: GAGCCTGGATGAGAAGGCCCAGGACGCAGGGAGCAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTCTTCTGGTCCAGGCTaGACTTTCGGACAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASSGPG*TFGQGA
Trigger: TGCCCCCTGTCCGAAAGTCCAGCCTGGACCAGAAGA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACGCCGGGAAGGCGGCTaGTTGGTTCAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGRREGG*LVQGAA
Trigger: AGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCACGGCGGAGATCTTaGACTGGCCGGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSRRRS*TGRPWA
Trigger: CGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCACGGCGGAGATCTTaGACTGGCCGGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSRRRS*TGRPWA
Trigger: CGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGACGCCTGTGCTGTTaGGGGGTTTTCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGRLCC*GVFSQG
Trigger: CCCCTGTGAGAAAACCCCCCAACAGCACAGGCGTCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTACATGGCCTCCTTGCTaGCACCCCCTCGTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPTWPPC*HPLVAA
Trigger: AGCGGCGACGAGGGGGTGCCAGCAAGGAGGCCATGT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCGGCGATCCTCTGCTaGCGGTGTTCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSAILC*RCSRIF
Trigger: GAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGTTCAGCCAGCTGTGTaGGCTGCAGTGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRVQPAV*AAVSRG
Trigger: ACCTCTGGACACTGCAGCCCACACAGCTGGCTGAAC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCATTCTCCTTCACCGTaGCCTGCGAGATCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRHSPSP*PARSCE
Trigger: CTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCCACGCTGCGATGCCTaGCTGTTTACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRPRCDA*LFTPAS
Trigger: AGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGAGCCGAGTCAGCTGTaGGAACTTGTCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCEPSQL*ELVSFT
Trigger: GGTGAAGGAGACAAGTTCCCACAGCTGACTCGGCTC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCGCTGCCGGGAAGGTaGGAGAGCCGAGCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPLPGR*ESRAES
Trigger: TGACTCGGCTCGGCTCTCCCACCTTCCCGGCAGCGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGATGTTGGAGAGCGGTaGCGGGGAGCAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGDVGER*RGAGRG
Trigger: GCCTCGCCCTGCTCCCCGCCACCGCTCTCCAACATC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAACAGATGCGAAGCATaGCTTTCACCTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCNRCEA*LSPCPA
Trigger: GGCTGGGCAAGGTGAAAGTCATGCTTCGCATCTGTT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGGGATCGTACAAGGTaGTCTGCTTCTTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGDRTR*SASSVG
Trigger: ACCCACGGAAGAAGCAGATCACCTTGTACGATCCCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGATGGCACAGGGAATaGTGCCCAGGTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARWHRE*CPGSAW
Trigger: CCATGCAGAACCTGGGCATCATTCCCTGTGCCATCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCAGGCAGTCCCTTTCTaGCTTGCCGGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLQAVPF*LAGCSL
Trigger: GAGGCTGCAGCCGGCAAGTCAGAAAGGGACTGCCTG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCTCCTTCTTGGACTCTaGAGGAGTAGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLLLGL*RSSCLL
Trigger: CAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCTCCTTCTTGGACTCTaGAGGAGTAGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALLLGL*RSSCLL
Trigger: CAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAACACGTCTGGGCTATaGAACTGTGGCACGACTGCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCNTSGL*NCGTTA
Trigger: AGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCGTGTTGGAGATGGTaGCCATGGCCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPCWRW*PWPCSL
Trigger: CAGTGAGCAAGGCCATGGTCACCATCTCCAACACGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPATWWRS*GFWWWR
Trigger: CCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGTTTCTTCGGGGTCTTaGGGCTCCGGCACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKVSSGS*GSGTCR
Trigger: GCGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAAC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCAAAGCCAGACTCGTaGCCCAGGGAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHAKPDS*PRELAS
Trigger: GGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGPLGRG*VLFRAS
Trigger: GCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCACCTCTGCCACGGTaGCTGCACACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSPLPR*LHTLQP
Trigger: AGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGTTCTGCAGCTGCGTaGCGCAGATGGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGSAAA*RRWGPH
Trigger: GTGAGGACCCCATCTGCGGCACGCAGCTGCAGAACC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTCTGGTTCTGCAGCTaGGTGCCGCAGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLWFCS*VPQMGS
Trigger: GGACCCCATCTGCGGCACGCAGCTGCAGAACCAGAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGCTCGCTCTGGTTCTaGAGCTGCGTGCCGCAGATG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSSLWF*SCVPQM
Trigger: CATCTGCGGCACGCAGCTGCAGAACCAGAGCGAGCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGCTCGCTCTGGTTCTaGAGCTGCGTGCCGCAGATG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSSLWF*SCVPQM
Trigger: CATCTGCGGCACGCAGCTGCAGAACCAGAGCGAGCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCGAGATCAATGAGATaGAGGCGGCTGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPRSMR*RRLRPP
Trigger: TGGAGGTCGCAGCCGCCTGCATCTCATTGATCTCGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTGTCAGAGAGGGCCGTaGCGTTGGGCCCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPCQRGP*RWARCR
Trigger: TCTACATCGGGCCCAACGGCACGGCCCTCTCTGACA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTCGCCCCGGGTCTTCTaGAGGGCTGGCACGATAGGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSPRVF*RAGTIG
Trigger: CCCTATCGTGCCAGCCCTGCAGAAGACCCGGGGCGA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGCCTCTCCTGCCTCTaGGGGCCGGCTGTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSLSCL*GPAVAP
Trigger: CGGGGCGACAGCCGGCCCGCAGAGGCAGGAGAGGCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTTAACCGGGGGCCTCTaGTTGCCTGCTCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLTGGL*LPALAQ
Trigger: TTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTGTGCTGGCTACTGCTaGCCGGGACGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKCAGYC*PGRSWV
Trigger: CACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCATGGGCCTGGGCTTaGCTTCCACGAAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPWAWA*LPRSRR
Trigger: CCTGCGGCTTCGTGGAAGGCAAGCCCAGGCCCATGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGAAGGAGTAGCTGCCTaGTGCTCATCATCGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTREGVAA*CSSSTG
Trigger: TCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCCGTCACCATCGTGGTaGTCAGGATCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRPSPSW*SGSPSW
Trigger: CCAAGAAGGAGATCCTGAGCACCACGATGGTGACGG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCACTGCTCACCCTCACTaGCCGCGCTCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCTAHPH*PRSSRS
Trigger: TGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCACGCTTTTGTTGGGATaGACGGGGCTCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAATLLLG*TGLWVA
Trigger: GGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCGAGCCAGAACACAGTaGTTGGGGGAAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRARTQ*LGEATF
Trigger: GAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGCTCG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCCCTGCCCAGCGAGTTaGTTCTGCTGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPPCPAS*FCWPAA
Trigger: AGCAGCTGGCCAGCAGAAGCAACTCGCTGGGCAGGG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTGGCCAGGAGGAGTCTaGTCACGGCGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPWPGGV*SRRRSW
Trigger: CCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTCCTGCTGAGGGACTaGGTGGACCAGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFLLRD*VDQGVC
Trigger: GCACACGCCCTGGTCCACGCAGTCCCTCAGCAGGAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCCCCTCGTCGCCGCTaGAGGCGCTCCACGTCATCG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPPRRR*RRSTSS
Trigger: CGATGACGTGGAGCGCCTGCAGCGGCGACGAGGGGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTACCTCGGCGATCCTCTaGTGGCGGTGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFTSAIL*WRCSRI
Trigger: GATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCCAGCTGTGTGGGCTaGAGTGTCCAGAGGTACACT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFASCVG*SVQRYT
Trigger: AGTGTACCTCTGGACACTGCAGCCCACACAGCTGGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGWPARS*EVFCDC
Trigger: GCAATCACAGAACACCTCGCAGGATCTCGCAGGCCA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCCTTCACCGTGGCCTaGGAGATCCTGCGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSFTVA*EILRGV
Trigger: AACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTACCAGGCCAGATTCCTaGCTGTCTAATTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPATRPDS*LSNSPR
Trigger: GCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGAAAAGTGGGCTGTGTaGCTTTCCTCCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAEKWAV*LSSLPR
Trigger: TCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTGAGTCCTCTTCCGTaGAAGCCGGTGGGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLSPLP*KPVGVD
Trigger: ATCCACGCCCACCGGCTTGCACGGAAGAGGACTCAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGTCCCGGTCGTTCCATaGCTTCCGGATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAVPVVP*LPDGVG
Trigger: CCCAACACCATCCGGAAGGCATGGAACGACCGGGAC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGTGCTCACTGCCGGCTaGCTGCTCCAACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHVLTAG*LLQRQH
Trigger: GTGCTGACGTTGGAGCAGGCAGCCGGCAGTGAGCAC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCTGGGTTTGCTGCCGTaGTTGTTGGCGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFLGLLP*LLAKPV
Trigger: CACAGGCTTCGCCAACAAGCACGGCAGCAAACCCAG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCAAGGCTGCTGGGTTTaGTGCCGTGCTTGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFQGCWV*CRACWR
Trigger: TCGCCAACAAGCACGGCAGCAAACCCAGCAGCCTTG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAGGCGGCCACCGATGTaGCTGTGGAAGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRRPPM*LWKSRW
Trigger: CCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCGGCAGCGGAAGAAGTaGAAGGCCGATGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRRQRKK*KADVSS
Trigger: AGAAGAAACATCGGCCTTCCACTTCTTCCGCTGCCG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCTGCGTGCCGCAGATaGGGTCCTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPAACRR*GPHRGT
Trigger: TGTACCTCTGTGAGGACCCCATCTGCGGCACGCAGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTACGTGTGAGTTGCGGTaGTCGTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPATCELR*SSSSQS
Trigger: GGACTGTGATGAGGACGACCACCGCAACTCACACGT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACTCCCGCAGCAACATaGCGAGCTTGCTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTPAAT*RACSLC
Trigger: ACAAAGAGAGCAAGCTCGCCATGTTGCTGCGGGAGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGTGCGCGATCATGGTaGTACGGCAGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCCARSW*YGSSCS
Trigger: GGAACATGAACTGCCGTACCACCATGATCGCGCACA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGATGCAATCTGGATGGTaGACAGGGTCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRMQSGW*TGSPRS
Trigger: GCTACGCGGAGACCCTGTCCACCATCCAGATTGCAT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGGGTCTCAGCTGGGTaGGCCTGCGCATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKRVSAG*ACACGL
Trigger: AAGGCCGCATGCGCAGGCCCACCCAGCTGAGACCCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGWKGLS*VGLRMR
Trigger: CCGCATGCGCAGGCCCACCCAGCTGAGACCCTTCCA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTACCGTGGCCCTGGTGTaGAAGGGTCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPTVALV*KGLSWV
Trigger: CACCCAGCTGAGACCCTTCCACACCAGGGCCACGGT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGTAGTCGGGGTCGCTaGACAGGTGAGCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSSRGR*TGERWG
Trigger: TCCCCATCGCTCACCTGTCCAGCGACCCCGACTACT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTTGCCCCCGCTGCTTaGCTTAACCGGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLAPAA*LNRGPL
Trigger: CAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGACTCCTCTGCATCTTaGAGGCTGGGAGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFDSSAS*RLGVQG
Trigger: GCCCTGAACTCCCAGCCTCCAAGATGCAGAGGAGTC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGCACCGTCACCATCGTaGTGCTCAGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAAPSPS*CSGSPS
Trigger: AGAAGGAGATCCTGAGCACCACGATGGTGACGGTGC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGCAAGTTGTCGGGGCTaGCCTTGGGCTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCASCRG*PWASLC
Trigger: GCAGAGAGAAGCCCAAGGCCAGCCCCGACAACTTGC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGTTCCGGGGGCTCATaGCAATGCAGGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCSGGS*QCRGKL
Trigger: CAGTTTACCCCTGCATTGCCATGAGCCCCCGGAACA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTTACTCTCCCGGGACTaGGCTAATGTGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFLLSRD*ANVGPA
Trigger: AGCAGGCCCCACATTAGCCCAGTCCCGGGAGAGTAA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCTCCTCCTGCCGGCTaGCCTTCTGAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKAPPAG*PSERPW
Trigger: CCAGGGCCTTTCAGAAGGCCAGCCGGCAGGAGGAGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGCTCCTCCTGCCGGCTaGCCTTCTGAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGAPPAG*PSERPW
Trigger: CCAGGGCCTTTCAGAAGGCCAGCCGGCAGGAGGAGC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCTGGCCCGGTTCTTCTaGTCCAGGCTGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLARFF*SRLDFR
Trigger: CCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGTTCAGGGGGCTGCTaGTGCCGCTGCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGSGGC*CRCRWH
Trigger: GTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCTTGCTGCTGCTGCTaGCGTCCTTCGTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHACCCC*RPSSCR
Trigger: GCGGCAAGACGAAGGACGCCAGCAGCAGCAGCAAGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGCTGTTCTCGCTCGTaGAGTCCTGCGCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHCCSRS*SPAPRT
Trigger: CGTCCTCGGCGCAGGACTCCACGAGCGAGAACAGCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCTGCTTGTTGGGATGTaGCATCGAGGTCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALLVGM*HRGHLL
Trigger: CAGCAGGTGACCTCGATGCCACATCCCAACAAGCAG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGATTGGCTTCCCTTTaGGTCCAGAAGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGLASL*VQKPPR
Trigger: CCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCAACCAGCAGCCCAATaGCAAACTCGAAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRQPAAQ*QTRRIG
Trigger: GCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCATCCTCCCGTGACTaGGACTGCTTCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGASSRD*DCFRMV
Trigger: GACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCCGTGCAATGCGACGTaGAGTGACTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCPCNAT*SDSQGH
Trigger: GTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGTAACAACCAGGCCTaGCGGCCCATGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSNNQA*RPMSLL
Trigger: GAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCGAAGCCTGTGTAGTTaGAGGTGGCACAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRSLCS*RWHRGR
Trigger: CCGCCCCCTGTGCCACCTCCAACTACACAGGCTTCG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTGCTGCCGTGCTTGTTaGCGAAGCCTGTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPACCRAC*RSLCSW
Trigger: CCAACTACACAGGCTTCGCCAACAAGCACGGCAGCA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAGGCTGACCTTGGCCTaGTGGGTTGGGGACCCGCTC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGRLTLA*WVGDPL
Trigger: GAGCGGGTCCCCAACCCACCAGGCCAAGGTCAGCCT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp ACTGCCCCAAGCCGCACTGTGTCCAGTGTTATGACATaGCTGCAGGTTCTGGGTAGGGCCACCCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TAPSRTVSSVMT*LQVLGRATQKQ
Trigger: CTGCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATGTCATAACACTGGACACAGTGCGGCTTGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGGGATCGTACAAGGTaGTCTGCTTCTTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGDRTR*SASSVG
Trigger: ACCCACGGAAGAAGCAGATCACCTTGTACGATCCCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGTAGATGTGCAGTGTaGAGAACACGTGTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGRCAV*RTRVSC
Trigger: GCAACTCACACGTGTTCTTCACACTGCACATCTACC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAAGGCTGCTGGACTTaGCGCTTTTGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELREGCWT*RFCWDA
Trigger: TGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCGCTGGCACTGTGCTaGGGGCTGGCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPLALC*GLARFF
Trigger: GAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGCATTCGTAGTGGCTaGCTGTCGCCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGIRSG*LSPCPA
Trigger: CGCTGGGCAGGGCGACAGTCAGCCACTACGAATGCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGCTCCTGTTCCTGCTaGGGGACTGCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSSCSC*GTAWTR
Trigger: CCTGGTCCACGCAGTCCCTCAGCAGGAACAGGAGCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCCTCCGCGGGGGCGTaGTCTTGCTGTAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKASAGA*SCCRAT
Trigger: CGTCGCCCTACAGCAAGATCACGCCCCCGCGGAGGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCTCATTCATTGTCTTTaGTGCCCCAGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALIHCL*CPSTEG
Trigger: GCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCTTCTGGGTCTACCTaGCCACGCTGCTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPSGST*PRCLLG
Trigger: TCCCAACAAGCAGCGTGGTCAGGTAGACCCAGAAGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGAGACAGCTTCCTCGTaGTGTAGAGGGGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCETASS*CRGEFK
Trigger: CTTGAATTCCCCTCTACATCACGAGGAAGCTGTCTC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACGGGCAGAGTGTTCTaGTTCCAAATCCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTGRVF*FQIRKR
Trigger: TCTCTTCCGGATTTGGAATCAGAACACTCTGCCCGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTATGCAATGAAGGCTTaGTACTGCCCCAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAYAMKA*YCPKPH
Trigger: GTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTCCACTCGGGAACCTaGGGCCCAGCAAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCFHSGT*GPAKRR
Trigger: TCTTCGCTTTGCTGGGCCTCAGGTTCCCGAGTGGAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGGTATGGGTACAGGGTaGCCCCGTTGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCGMGTG*PRWFST
Trigger: TGTCGAGAACCAACGGGGTCACCCTGTACCCATACC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGACTGGATCACCTCTaGCACGGTGCCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRLDHL*HGACTH
Trigger: GTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGAACACGTGTGAGTTaGGGTGGTCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARTRVS*GGRPHH
Trigger: GTGATGAGGACGACCACCGCAACTCACACGTGTTCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCGAGATCAATGAGATaGAGGCGGCTGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPRSMR*RRLRPP
Trigger: TGGAGGTCGCAGCCGCCTGCATCTCATTGATCTCGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGCTGCAGCCTCTCCTaGCTCTGCGGGCCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGCSLS*LCGPAV
Trigger: GACAGCCGGCCCGCAGAGGCAGGAGAGGCTGCAGCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAGTCCCTTTCTGACTTaGCGGCTGCAGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASPFLT*RLQPLL
Trigger: CAGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCAGTCCAGCCTCTCCTaGAGCTCGGCAAACGTGTTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPQSSLS*SSANVL
Trigger: CAACACGTTTGCCGAGCTGCAGGAGAGGCTGGACTG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCTCGCTGCCGTCGATaGAGTCCAGCCTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPRCRR*SPASPA
Trigger: TGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCTGGGTGTAGACTTTaGATCTCTGGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSGCRL*ISGKES
Trigger: GCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGAAGGAGTAGCTGCCTaGTGCTCATCATCGACAGGA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAEGVAA*CSSSTG
Trigger: TCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGCTCCAGTGGCTGCTaGACCGTCACCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSSSGC*TVTIVV
Trigger: CACCACGATGGTGACGGTGCAGCAGCCACTGGAGCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTTCAGCTCCAGTGGCTaGTGCACCGTCACCATCGTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPFSSSG*CTVTIV
Trigger: CACGATGGTGACGGTGCAGCAGCCACTGGAGCTGAA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACTGCTCACCCTCACTaGCCGCGCTCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTAHPH*PRSSRS
Trigger: TGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTGTACCCCTCGCAGCTaGTCAGATTGGCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPCTPRS*SDWPCW
Trigger: CCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGAGCTTGCTGCTGCTaGTGGCGTCCTTCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRACCC*WRPSSC
Trigger: GCAAGACGAAGGACGCCAGCAGCAGCAGCAAGCTCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCGTCCTTGCCCGCGTaGAGCCGGGAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPSLPA*SRELTE
Trigger: CTCCGTGAGCTCCCGGCTGCACGCGGGCAAGGACGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGGCCAGGAGGAGTCTaGTCACGGCGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHWPGGV*SRRRSW
Trigger: CCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCACCTCGGCGATCCTCTaGTGGCGGTGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAATSAIL*WRCSRI
Trigger: GATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGGGGAAGCTCTCTCTaGCTTTGGGCAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRGSSL*LWAGAK
Trigger: CTTTGCTCCTGCCCAAAGGCAGAGAGAGCTTCCCCT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTCCCCACGCTGCGATaGCTGGCTGTTTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPFPTLR*LAVYPS
Trigger: GCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTCCCCACGCTGCGATaGCTGGCTGTTTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFPTLR*LAVYPS
Trigger: GCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCTTGCAAAGGCCCATaGACAAAACTAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRACKGP*TKLACQ
Trigger: TTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGCCAAGTCAGTCCGTaGTCCCCCACGAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSQVSP*SPTRKA
Trigger: CGCTTTCCTCGTGGGGGAGCACGGACTGACTTGGCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTCCTCGTCCCCTTCTaGCTCTTCCAGCCGCACGTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFLVPF*LFQPHV
Trigger: GACGTGCGGCTGGAAGAGGCAGAAGGGGACGAGGAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATGGAGCCCACCCACGTaGCGGGACCCCACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRWSPPT*RDPTRV
Trigger: CACCCTGGTGGGGTCCCGGCACGTGGGTGGGCTCCA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTCGACAGGGACCAGGTaGCATCCAGGTACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSTGTR*HPGTGE
Trigger: CTCACCAGTACCTGGATGGCACCTGGTCCCTGTCGA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCGGCAGCGGAAGAAGTaGAAGGCCGATGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRQRKK*KADVSS
Trigger: AGAAGAAACATCGGCCTTCCACTTCTTCCGCTGCCG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTTTCCCAGTTTGGCGTaGCCGAAACAGAACACGCAG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRFPSLA*PKQNTQ
Trigger: CTGCGTGTTCTGTTTCGGCCACGCCAAACTGGGAAA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTACACGCCCGGGGACTaGCCGTCCTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKYTPGD*PSCRLP
Trigger: GGGCAGCCTGCAGGACGGCCAGTCCCCGGGCGTGTA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGCTGCGTGCCGCAGATaGGGTCCTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLAACRR*GPHRGT
Trigger: TGTACCTCTGTGAGGACCCCATCTGCGGCACGCAGC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTCCTGCGGGAGGCAATaGCGGCATCCAGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSCGRQ*RHPGKR
Trigger: CCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTCATCACAGTCCTGTTaGTGGCTCCTGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSSQSC*WLLREA
Trigger: TGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCATCACAGTCCTGTTaGTGGCTCCTGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSSQSC*WLLREA
Trigger: TGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTACTCCCGCAGCAACATaGCGAGCTTGCTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGTPAAT*RACSLC
Trigger: ACAAAGAGAGCAAGCTCGCCATGTTGCTGCGGGAGT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGTGCGCGATCATGGTaGTACGGCAGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCARSW*YGSSCS
Trigger: GGAACATGAACTGCCGTACCACCATGATCGCGCACA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTGGAAGGGTCTCAGCTaGGTGGGCCTGCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDWKGLS*VGLRMR
Trigger: CCGCATGCGCAGGCCCACCCAGCTGAGACCCTTCCA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGTCCACCGTGGCCCTaGTGTGGAAGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGPPWP*CGRVSA
Trigger: AGCTGAGACCCTTCCACACCAGGGCCACGGTGGACC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGGACAGGTGAGCGATaGGGAAGTCAGGGTCCACCG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPWTGER*GSQGPP
Trigger: CGGTGGACCCTGACTTCCCCATCGCTCACCTGTCCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGTAGTCGGGGTCGCTaGACAGGTGAGCGATGGGGA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSSRGR*TGERWG
Trigger: TCCCCATCGCTCACCTGTCCAGCGACCCCGACTACT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTCTGCTTGCCTGCTCTaGCCCAAACTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASACLL*PKLSRQ
Trigger: CTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTATCAGACTCAGAGAGTaGGCTTGCCCCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPIRLRE*ACPRCL
Trigger: CAAGCAGCGGGGGCAAGCCCACTCTCTGAGTCTGAT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTGCCCAAAACACGTCTaGGCTATGAAACTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRCPKHV*AMKLWH
Trigger: GTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGCAAGTTGTCGGGGCTaGCCTTGGGCTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPASCRG*PWASLC
Trigger: GCAGAGAGAAGCCCAAGGCCAGCCCCGACAACTTGC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGACTGGGCTAATGTaGGGCCTGCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGTGLM*GLLWGW
Trigger: CCACCCCCAAAGCAGGCCCCACATTAGCCCAGTCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGGACTGGGCTAATGTaGGGCCTGCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGTGLM*GLLWGW
Trigger: CCACCCCCAAAGCAGGCCCCACATTAGCCCAGTCCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGCTCCTGCTCTGCTCTaGTCTCAGCATTCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPAPALL*SQHSRG
Trigger: GCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCTTCTGGTCCAGGCTaGACTTTCGGACAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSSGPG*TFGQGA
Trigger: TGCCCCCTGTCCGAAAGTCCAGCCTGGACCAGAAGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCACTGTGCTGAGGGCTaGCCCGGTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHHCAEG*PGSSGP
Trigger: TGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCGCGCGCTCTGGGGCTaGCCAGGAGGAGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRALWG*PGGVCS
Trigger: TGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGCTGTTCTCGCTCGTaGAGTCCTGCGCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGCCSRS*SPAPRT
Trigger: CGTCCTCGGCGCAGGACTCCACGAGCGAGAACAGCA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCCGTCTCTGAGAACCTaGATTGGAGCGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAPSLRT*IGAFLR
Trigger: CCGAAGAAACGCTCCAATCCAGGTTCTCAGAGACGG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCGGCGATCCTCTGCTaGCGGTGTTCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSAILC*RCSRIF
Trigger: GAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAAGCCTGTCCCTTCTTaGCATAGAGGCTTTGGGACA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCKPVPS*HRGFGT
Trigger: TGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRANSKD*LPFGSR
Trigger: TCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGAAGGCAGTGCAGCATaGAAGGAACCTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAEGSAA*KEPQGR
Trigger: CCTCCCCTGAGGTTCCTTCCATGCTGCACTGCCTTC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTACCAGGCTCTGTCACTaGCTAAAGGAAGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPATRLCH*LKEGSA
Trigger: TGCACTGCCTTCCTTTAGCCAGTGACAGAGCCTGGT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCCCCCTTGCCTCCTTaGGTTCTCTATCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSPLPP*VLYHQN
Trigger: GTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTTTGCAGCTCGCAGGTaGGAACTGAAAGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCFAARR*ELKAHD
Trigger: ATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCCACGCTGCGATGCCTaGCTGTTTACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCPRCDA*LFTPAS
Trigger: AGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTGAACCTCCACCCTaGATGGTAGATGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGFEPPP*MVDAAG
Trigger: TCCAGCCGCATCTACCATCCAGGGTGGAGGTTCAAA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGAAGAGTGTCCTTCATaGGGGGACAGCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAEECPS*GDSWAT
Trigger: TGTGGCCCAGCTGTCCCCCCATGAAGGACACTCTTC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTCGCCTCCACACGTGTaGACCTTGGGAACAACTATG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASPPHV*TLGTTM
Trigger: CATAGTTGTTCCCAAGGTCCACACGTGTGGAGGCGA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCGATGCACGGCACGTaGATAGCATTTCCAACCGTG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSMHGT*IAFPTV
Trigger: CACGGTTGGAAATGCTATCCACGTGCCGTGCATCGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACAAAGGCCCAGTCTCTaGGCTGCTGGAGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGQRPSL*AAGAHP
Trigger: TGGGTGGGCTCCAGCAGCCCAGAGACTGGGCCTTTG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGGGATCGTACAAGGTaGTCTGCTTCTTCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGDRTR*SASSVG
Trigger: ACCCACGGAAGAAGCAGATCACCTTGTACGATCCCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCTCTGTTGGTCAGCTaGCCTTCGGACCCATTATCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSLLVS*PSDPLS
Trigger: AGATAATGGGTCCGAAGGTCAGCTGACCAACAGAGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTCCTTCTTGGACTCTaGAGGAGTAGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLLLGL*RSSCLL
Trigger: CAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCTTCAGCTTTGCATTaGAGCACATGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSSALH*STWPPC
Trigger: GCAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTCTTCAGCTTTGCATTaGAGCACATGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGSSALH*STWPPC
Trigger: GCAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCCTTCCACGGTGTTTaGCGTTTGCACCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSFHGV*RLHLSY
Trigger: GTAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTCGCAGGTGGGAACTaGAAGCCCATGATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLAGGN*KPMIKQ
Trigger: TTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGCGTATAAGACTTTTTaGACCTCCACCCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCAYKTF*TSTLDG
Trigger: ACCATCCAGGGTGGAGGTTCAAAAAGTCTTATACGC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTCCACTCGGGAACCTaGGGCCCAGCAAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHFHSGT*GPAKRR
Trigger: TCTTCGCTTTGCTGGGCCTCAGGTTCCCGAGTGGAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTCCACTCGGGAACCTaGGGCCCAGCAAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFHSGT*GPAKRR
Trigger: TCTTCGCTTTGCTGGGCCTCAGGTTCCCGAGTGGAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTATACCACTTTCTCTTaGTGCTCTCCCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRYTTFS*CSPRRA
Trigger: TGCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGGGGAGGGGAGGTCTaGAGAATCCCACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGGGEV*RIPLKL
Trigger: CAGCTTCAGTGGGATTCTGCAGACCTCCCCTCCCCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCACCTCTGCCACGGTaGCTGCACACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSPLPR*LHTLQP
Trigger: AGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAGTCCCTTTCTGACTTaGCGGCTGCAGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSPFLT*RLQPLL
Trigger: CAGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCAGTCCAGCCTCTCCTaGAGCTCGGCAAACGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLQSSLS*SSANVL
Trigger: CAACACGTTTGCCGAGCTGCAGGAGAGGCTGGACTG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTTAACCGGGGGCCTCTaGTTGCCTGCTCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLTGGL*LPALAQ
Trigger: TTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGTGGGGAGGCGCTGTaGTGGCTACTGCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSGEAL*WLLLPG
Trigger: CCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGGAGTAGCTGCCTGCTaGTCATCATCGACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFGVAAC*SSSTGV
Trigger: AACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCACAGGTTCTGCCATTaGCTCCCCGTGCCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAHRFCH*LPVPKT
Trigger: TGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCACAGGTTCTGCCATTaGCTCCCCGTGCCCAAAACA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPHRFCH*LPVPKT
Trigger: TGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCCTTGGGCTTCTCTCTaGACACCACAGCGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPPWASL*TPQRCS
Trigger: AGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCAGCGAGTTGCTTCTaGTGGCCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPASCF*WPAAPA
Trigger: AGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGCTGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCGCTCTCGTAGCCGCTaGTGCCGCCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRSRSR*CRRCGR
Trigger: TCTACCACAGCGGCGGCAGCAGCGGCTACGAGAGCG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTGCCGCCCACGGAGCTaGTGTTCTCGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDCRPRS*CSRSWS
Trigger: ACTCCACGAGCGAGAACAGCAGCTCCGTGGGCGGCA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACAAGGCCCCTCGGGCTaGTCCGCAAGGGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRQGPSG*SARGHP
Trigger: TGGATGGCCCCTTGCGGAGCAGCCCGAGGGGCCTTG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGCACATGGCCTCCTTaGTGGCACCCCCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESSTWPP*WHPLVA
Trigger: GGCGACGAGGGGGTGCCAGCAAGGAGGCCATGTGCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACCTCGGCGATCCTCTaGTGGCGGTGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTSAIL*WRCSRI
Trigger: GATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGCATGCGACTGTCCTaGAGAATGGGGTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSMRLS*RMGSRL
Trigger: TAACCTTGACCCCATTCTGCAGGACAGTCGCATGCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCCTTCACCGTGGCCTaGGAGATCCTGCGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSFTVA*EILRGV
Trigger: AACACCTCGCAGGATCTCGCAGGCCACGGTGAAGGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCCTCAGCACCACCGTaGAATGCGACGTGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSSAPP*NATWSD
Trigger: GTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTGAGTCCTCTTCCGTaGAAGCCGGTGGGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLSPLP*KPVGVD
Trigger: ATCCACGCCCACCGGCTTGCACGGAAGAGGACTCAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTGCACAAAACTAGCCTaGCAAGGGGCTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLCTKLA*QGAAGT
Trigger: GGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGCAACCTCAGGGCCTaGCTCTTGAGCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSNLRA*LLSSTR
Trigger: CCTGGTGGAGCTCAAGAGGCAGGCCCTGAGGTTGCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGAAAGCAGGGTCCTTaGCCGGGAAGGGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRKQGP*PGRAPG
Trigger: TCCCGGGGCCCTTCCCGGGCAAGGACCCTGCTTTCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATCACTGCCGGCTGCCTaGTCCAACGTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSLPAA*SNVSTI
Trigger: GATGGTGCTGACGTTGGAGCAGGCAGCCGGCAGTGA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGGCGGCCACCGATGTaGCTGTGGAAGTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRRPPM*LWKSRW
Trigger: CCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCACAGTCCTGTTGGTaGCTCCTGCGGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSQSCW*LLREAM
Trigger: CATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCACAGTCCTGTTGGTaGCTCCTGCGGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSQSCW*LLREAM
Trigger: CATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCGATGCAATCTGGATaGTGGACAGGGTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSMQSG*WTGSPR
Trigger: ACGCGGAGACCCTGTCCACCATCCAGATTGCATCGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCCCGCCGGACGAGCTaGATGTGTACTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPRRTS*MCTSSS
Trigger: AGAAGACGAAGTACACATCCAGCTCGTCCGGCGGGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGGGTCTCAGCTGGGTaGGCCTGCGCATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRVSAG*ACACGL
Trigger: AAGGCCGCATGCGCAGGCCCACCCAGCTGAGACCCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGGTCTTCTGCAGGGCTaGCACGATAGGGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCGLLQG*HDRDKV
Trigger: GACTTTGTCCCTATCGTGCCAGCCCTGCAGAAGACC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCTGCTTGCCTGCTCTaGCCCAAACTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSACLL*PKLSRQ
Trigger: CTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGCTGCTCTGGAGGCTaGGGCTCTGCACGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGCSGG*GSARVG
Trigger: CCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAGCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCTGGGAAGGAGAGCTaGGTGGCTTGTACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSGKES*VACTPR
Trigger: CCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGGCCTCCGGCTCTTaGATGTTCCGGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGASGS*MFRGLM
Trigger: CATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTACTCTCCCGGGACTaGGCTAATGTGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLLSRD*ANVGPA
Trigger: AGCAGGCCCCACATTAGCCCAGTCCCGGGAGAGTAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCTTCTGGTCCAGGCTaGACTTTCGGACAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSSGPG*TFGQGA
Trigger: TGCCCCCTGTCCGAAAGTCCAGCCTGGACCAGAAGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGCGAGTTGCTTCTGCTaGCCAGCTGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGASCFC*PAAPAW
Trigger: CCAAGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTCTGAGAACCTGGATTaGAGCGTTTCTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASENLD*SVSSGS
Trigger: AGACCCCGAAGAAACGCTCCAATCCAGGTTCTCAGA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCTGAGAACCTGGATTaGAGCGTTTCTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSENLD*SVSSGS
Trigger: AGACCCCGAAGAAACGCTCCAATCCAGGTTCTCAGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCGGCGATCCTCTGCTaGCGGTGTTCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSAILC*RCSRIF
Trigger: GAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGCATCAGATACTGTTTaGTCGCCTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGASDTV*SPPAPS
Trigger: TGAAGGAGCTGGAGGCGACCAAACAGTATCTGATGC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAADHAAC*DVASRS
Trigger: TGACCTCGATGCCACATCCCAACAAGCAGCGTGGTC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTTGGGAGCCAAGACCTaGACATCCATAGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALGAKT*TSIVFS
Trigger: GCTGAAGACTATGGATGTCCAGGTCTTGGCTCCCAA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTTCAGCCAGCAGATTTaGGCATGTCTCCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRFSQQI*ACLLFA
Trigger: TGCAAACAGGAGACATGCCCAAATCTGCTGGCTGAA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGCATCCTCCCGTGACTaGGACTGCTTCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAASSRD*DCFRMV
Trigger: GACCATTCTGAAGCAGTCCCAGTCACGGGAGGATGC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRNQGET*NYHVWP
Trigger: TGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCGTGCAATGCGACGTaGAGTGACTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPCNAT*SDSQGH
Trigger: GTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCGTGCAATGCGACGTaGAGTGACTCCCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPCNAT*SDSQGH
Trigger: GTGTCCCTGGGAGTCACTCCACGTCGCATTGCACGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGATGGTAGATGCGGCTaGACTGAAGTCACTACCGCC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPDGRCG*TEVTTA
Trigger: GGCGGTAGTGACTTCAGTCCAGCCGCATCTACCATC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCATTGCTGCAGGTTCTaGGTAGGGCCACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAHCCRF*VGPPKS
Trigger: GCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCACACGTGTGGACCTTaGGAACAACTATGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRHTCGP*EQLCLE
Trigger: CTCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATTCCGTGCAAGCCGGTaGGCGTGGATTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGFRASR*AWISKP
Trigger: GGGCTTGGAAATCCACGCCCACCGGCTTGCACGGAA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCACAATAAATGCACCTaGGCAGACCTTGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCHNKCT*ADLVST
Trigger: AGTGGAGACAAGGTCTGCCCAGGTGCATTTATTGTG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTGCCAAGGGGCTGCTaGGACCTGCCCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLPRGC*DLPKYR
Trigger: TCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGCTGCCGTGCTTGTTaGCGAAGCCTGTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAACCRAC*RSLCSW
Trigger: CCAACTACACAGGCTTCGCCAACAAGCACGGCAGCA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp GAGGTCCTGCTTCCCAGGGCAACACACTTGTCAGACTaGGGAGATACACAGAAGGAAGAACGAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: EVLLPRATHLSD*GDTQKEERAMP
Trigger: TGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp GAGCTCAGGGAGGTCCTGCTTCCCAGGGCAACACACTaGTCAGACTTGGGAGATACACAGAAGGAAGAACGA +
Preference number: 4 (lower is better)
Translates to: ELREVLLPRATH*SDLGDTQKEER
Trigger: TCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp ACCAGCAACCAGCAGCCCAATGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAGAAGCCTCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: TSNQQPNGKLEG*ASLWVQKPPRI
Trigger: TATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAACAGATGCGAAGCATaGCTTTCACCTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPNRCEA*LSPCPA
Trigger: GGCTGGGCAAGGTGAAAGTCATGCTTCGCATCTGTT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGAAAGAGCTGGATTCTaGAGTATCTCGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAERAGF*SISSQG
Trigger: ACCTTGGCTCGAGATACTTCAGAATCCAGCTCTTTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCGAGAGACACAGCCCTaGGCCTCCTTCTCGATTTTT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRETQP*ASFSIF
Trigger: AAAAATCGAGAAGGAGGCTCAGGGCTGTGTCTCTCG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCAGGCAGTCCCTTTCTaGCTTGCCGGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESQAVPF*LAGCSL
Trigger: GAGGCTGCAGCCGGCAAGTCAGAAAGGGACTGCCTG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCGGGACGCTCCTGGGTaGGGCCGGGCTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISRDAPG*GRAGAV
Trigger: CACAGCCCCAGCCCGGCCTCACCCAGGAGCGTCCCG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGGGACGCTCCTGGGTaGGGCCGGGCTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRDAPG*GRAGAV
Trigger: CACAGCCCCAGCCCGGCCTCACCCAGGAGCGTCCCG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAACACGTCTGGGCTATaGAACTGTGGCACGACTGCT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAANTSGL*NCGTTA
Trigger: AGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCATCTCAGACAGGATaGGCAAGTTGTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPSQTG*ASCRGW
Trigger: CCAGCCCCGACAACTTGCTCATCCTGTCTGAGATGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGCCGGCTGGCCTTCTaGAAGGCCCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCRLAF*KALGRL
Trigger: CAGCCTTCCCAGGGCCTTTCAGAAGGCCAGCCGGCA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATAAGCCTCCGTCTCTaGGAACCTGGATTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCISLRL*EPGLER
Trigger: ACGCTCCAATCCAGGTTCTCAGAGACGGAGGCTTAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCTTCAGCTTTGCATTaGAGCACATGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSSALH*STWPPC
Trigger: GCAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCCAAGTCAAATTCACTaGGCCACTTGTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRPSQIH*ATCWDP
Trigger: TGGATCCCAACAAGTGGCTCAGTGAATTTGACTTGG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGCCTTGCAGAAGTTaGCACGGCTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGPCRS*HGSPGA
Trigger: AGCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAAGATATGCTGCATTTaGGGGCAAAAGGGAAGCGTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAKICCI*GQKGSV
Trigger: CACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCAAATCCGGAAGAGATaGAAGAGACAGCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGQIRKR*KRQLPR
Trigger: ACGAGGAAGCTGTCTCTTTCATCTCTTCCGGATTTG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTATCAGCAGTGGCCAATaGTATAGACGGCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAISSGQ*YRRLCL
Trigger: CAAACACAGCCGTCTATATCATTGGCCACTGCTGAT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGCAGGAAAGAACAATaGGTACAGGCAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSRKEQ*VQAGLL
Trigger: AAGGAGTCCTGCCTGTACTCATTGTTCTTTCCTGCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCCGTGTGGTGGCATTaGAGAGTGTCCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPVWWH*RVSFMG
Trigger: CCCCATGAAGGACACTCTTCAATGCCACCACACGGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTATGCAATGAAGGCTTaGTACTGCCCCAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCYAMKA*YCPKPH
Trigger: GTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPLGRG*VLFRAS
Trigger: GCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTGGCCATCTGGAGGCTaGCCTTGGCCTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESWPSGG*PWPGGL
Trigger: CAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGTATGGGTACAGGGTaGCCCCGTTGGTTCTCGACA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGMGTG*PRWFST
Trigger: TGTCGAGAACCAACGGGGTCACCCTGTACCCATACC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTTGGAGGAACCTGGTTaGCTCTCTTTTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPALEEPG*LSFGRH
Trigger: ATGCCTTCCAAAAGAGAGGCAACCAGGTTCCTCCAA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTCACCTCTGCCACGGTaGCTGCACACACTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSPLPR*LHTLQP
Trigger: AGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGAACACGCAGCCATCTaGCCCGTTGACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKEHAAI*PVDHRL
Trigger: CAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGTTCTGCAGCTGCGTaGCGCAGATGGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGSAAA*RRWGPH
Trigger: GTGAGGACCCCATCTGCGGCACGCAGCTGCAGAACC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCTCTGGTTCTGCAGCTaGGTGCCGCAGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESLWFCS*VPQMGS
Trigger: GGACCCCATCTGCGGCACGCAGCTGCAGAACCAGAG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCTCGGCAAACGTGTTaGACTTCAGGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPARQTC*TSGSPF
Trigger: AAAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTTCGAAAGGAAAGCTaGTGGGCTCCTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLRKES*WAPRCR
Trigger: ACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCGGGGGCCTCTGCTTaGCTGCTCTGGCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPGASA*LLWPKL
Trigger: CAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGTACGCACCTCGGGCTaGAGCAAGGACTCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDVRTSG*SKDSLD
Trigger: GTCTAGGGAGTCCTTGCTGCAGCCCGAGGTGCGTAC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGAAGGAGTAGCTGCCTaGTGCTCATCATCGACAGGA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCEGVAA*CSSSTG
Trigger: TCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCACAGGTTCTGCCATTaGCTCCCCGTGCCCAAAACA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPHRFCH*LPVPKT
Trigger: TGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGCCTTTGATGGGGGCTaGTTTGTTGAAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRAFDGG*FVERVI
Trigger: GATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGTCCTGCTCCTGCTCTaGTCTGGTCTCAGCATTCGA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLVLLLL*SGLSIR
Trigger: TCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGAC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCTCGTAGCCGCTGCTaGCGCCGCTGTGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSRSRC*RRCGRT
Trigger: TGTTCTACCACAGCGGCGGCAGCAGCGGCTACGAGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACGCTCTCGTAGCCGCTaGTGCCGCCGCTGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRSRSR*CRRCGR
Trigger: TCTACCACAGCGGCGGCAGCAGCGGCTACGAGAGCG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCCAGCTCCCAAACCTaGTCCAAGTCAAATTCACTG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSSSQT*SKSNSL
Trigger: CAGTGAATTTGACTTGGAGCAGGTTTGGGAGCTGGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAACAAGATCAAAGTTTaGAGCTCGCAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCNKIKV*SSQVGT
Trigger: AGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACCAGGCCAGATTCCTaGCTGTCTAATTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTRPDS*LSNSPR
Trigger: GCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGEGLCV*SKNGLL
Trigger: TAGTAACCCATTCTTGGAGCACACACAGAGTCCCTC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGGCTGCTGGGACCTaGCCAAGTACAGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGAAGT*PSTEEL
Trigger: CAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTTCTCTTCAAAGCATaGTTTTCCTCGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLLFKA*FSSSPS
Trigger: AGAAGGGGACGAGGAAAAGCATGCTTTGAAGAGAAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCACCCCGTATTTCTTaGCCCTGGTGGAGACCGCAA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSPRIS*PWWRPQ
Trigger: TTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGCTGCTGGGTTTGCTaGCGTGCTTGTTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGCWVC*RACWRS
Trigger: GCTTCGCCAACAAGCACGGCAGCAAACCCAGCAGCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGGCGGAAGGCTTGTCTaGATTGTAGCGGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLGGRLV*IVAVQH
Trigger: GTGCTGAACCGCTACAATGCAGACAAGCCTTCCGCC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAAGGCAAACATCTTTaGAGGAACCTGGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELREGKHL*RNLVAS
Trigger: AGAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTGAGAAGCGTCTTGTaGAAAAACTGCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLRSVL*KNCIEG
Trigger: GCCTTCGATGCAGTTTTTCCACAAGACGCTTCTCAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCGTTGACCACAGACTaGATCACCTCTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPLTTD*ITSATV
Trigger: CACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTTCCCAGTTTGGCGTaGCCGAAACAGAACACGCAG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCFPSLA*PKQNTQ
Trigger: CTGCGTGTTCTGTTTCGGCCACGCCAAACTGGGAAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGGATTTTCCCAGTTTaGCGTGGCCGAAACAGAACA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARIFPV*RGRNRT
Trigger: TGTTCTGTTTCGGCCACGCCAAACTGGGAAAATCCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTGCCCAGGTTCTGCATaGAATCATCCTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGCPGSA*NHPFRS
Trigger: TGATCGGAAAGGATGATTCCATGCAGAACCTGGGCA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTACGTGTGAGTTGCGGTaGTCGTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLTCELR*SSSSQS
Trigger: GGACTGTGATGAGGACGACCACCGCAACTCACACGT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTACTCCCGCAGCAACATaGCGAGCTTGCTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPTPAAT*RACSLC
Trigger: ACAAAGAGAGCAAGCTCGCCATGTTGCTGCGGGAGT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATATGCAATCTGGATGGTaGACAGGGTCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHMQSGW*TGSPRS
Trigger: GCTACGCGGAGACCCTGTCCACCATCCAGATTGCAT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCGATGCAATCTGGATaGTGGACAGGGTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSMQSG*WTGSPR
Trigger: ACGCGGAGACCCTGTCCACCATCCAGATTGCATCGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTACTCTCGATGCAATCTaGATGGTGGACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPTLDAI*MVDRVS
Trigger: GGAGACCCTGTCCACCATCCAGATTGCATCGAGAGT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCGAAAGGAAAGCTGCTaGGCTCCTCGCTGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRKESC*APRCRR
Trigger: TCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGACTCCTCTGCATCTTaGAGGCTGGGAGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGDSSAS*RLGVQG
Trigger: GCCCTGAACTCCCAGCCTCCAAGATGCAGAGGAGTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGTACTCCGAGGTCTTaGACAGGCTGGCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGCTPRS*TGWRCP
Trigger: TGGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGACGGGGGCCGTGCTaGAGTAGCACTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRRGPC*SSTPGP
Trigger: AGGACCTGGAGTGCTACTCCAGCACGGCCCCCGTCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTGTCGGGGCTGGCCTTaGGCTTCTCTCTGCACACCA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDCRGWP*ASLCTP
Trigger: TGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTTACTCTCCCGGGACTaGGCTAATGTGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLLSRD*ANVGPA
Trigger: AGCAGGCCCCACATTAGCCCAGTCCCGGGAGAGTAA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTGCACCCACCCCGTTaGTCTCAGCAGCGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLHPPR*SQQRSN
Trigger: ATTACTGCGCTGCTGAGACCAACGGGGTGGGTGCAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCACTGTGCTGAGGGCTaGCCCGGTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDHCAEG*PGSSGP
Trigger: TGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGCTTGCTGCTGCTGCTaGCGTCCTTCGTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESACCCC*RPSSCR
Trigger: GCGGCAAGACGAAGGACGCCAGCAGCAGCAGCAAGC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCGTCTCTGAGAACCTaGATTGGAGCGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPSLRT*IGAFLR
Trigger: CCGAAGAAACGCTCCAATCCAGGTTCTCAGAGACGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGACATGGCCTCCTTGCTaGCACCCCCTCGTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKTWPPC*HPLVAA
Trigger: AGCGGCGACGAGGGGGTGCCAGCAAGGAGGCCATGT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAACTAGGACAAGGGTCTaGCTCATCTACCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGTRTRV*LIYRRL
Trigger: CAGGCGCCGGTAGATGAGCCAGACCCTTGTCCTAGT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTGCTTGTTGGGATGTaGCATCGAGGTCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLLVGM*HRGHLL
Trigger: CAGCAGGTGACCTCGATGCCACATCCCAACAAGCAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGACCACGCTGCTTGTTaGGATGTGGCATCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPDHAAC*DVASRS
Trigger: TGACCTCGATGCCACATCCCAACAAGCAGCGTGGTC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGGCCACGCAAACTGTaGATTTGTGGGTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGPRKL*ICGSRN
Trigger: GTTCCTTGACCCACAAATCCACAGTTTGCGTGGCCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGATGGCTCTGGTGAATTaGTTCCAGCTTTCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRMALVN*FQLSFK
Trigger: CTTGAACGAAAGCTGGAACCAATTCACCAGAGCCAT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGTLRF*AALSSA
Trigger: TGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCACACTTGTCAGACTTaGGAGATACACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRHTCQT*EIHRRK
Trigger: CTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCACCAGGCTCTGTCACTaGCTAAAGGAAGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAATRLCH*LKEGSA
Trigger: TGCACTGCCTTCCTTTAGCCAGTGACAGAGCCTGGT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGTASE*SAGTPS
Trigger: GGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGTASE*SAGTPS
Trigger: GGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCCCCCTTGCCTCCTTaGGTTCTCTATCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSPLPP*VLYHQN
Trigger: GTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAGATACACACCCAAGTaGGCACAACTGCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRYTPK*AQLHFW
Trigger: CCAAAAATGCAGTTGTGCCCACTTGGGTGTGTATCT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGATACACACCCAAGTaGGCACAACTGCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRRYTPK*AQLHFW
Trigger: CCAAAAATGCAGTTGTGCCCACTTGGGTGTGTATCT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCATTGCTGCAGGTTCTaGGTAGGGCCACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLHCCRF*VGPPKS
Trigger: GCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTCGCCTCCACACGTGTaGACCTTGGGAACAACTATG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASPPHV*TLGTTM
Trigger: CATAGTTGTTCCCAAGGTCCACACGTGTGGAGGCGA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCGATGCACGGCACGTaGATAGCATTTCCAACCGTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSMHGT*IAFPTV
Trigger: CACGGTTGGAAATGCTATCCACGTGCCGTGCATCGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTTCCGTGCAAGCCGGTaGGCGTGGATTTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDFRASR*AWISKP
Trigger: GGGCTTGGAAATCCACGCCCACCGGCTTGCACGGAA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCCATGCCTTCCGGATaGTGTTGGGGACCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSMPSG*CWGPGV
Trigger: AACTCCAGGTCCCCAACACCATCCGGAAGGCATGGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCACTGGTTCAGGTGAGTaGCGCAAATGTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCTGSGE*RKCHSG
Trigger: ACCGCTGTGACATTTGCGCCACTCACCTGAACCAGT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTTGGCCTGGTGGGTTaGGGACCCGCTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLGLVG*GPALLF
Trigger: GAAAAGAAGAGCGGGTCCCCAACCCACCAGGCCAAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGATGTTCCCATTGCTTaGACTGGTGGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPDVPIA*TGGHLE
Trigger: CTCCAGATGGCCACCAGTCCAAGCAATGGGAACATC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGACAGATTTAACTTCTaGGCAGCTCGTGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRDRFNF*AARAKK
Trigger: CTTCTTTGCACGAGCTGCCCAGAAGTTAAATCTGTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp AGAGGAGCCCCTTCTCCAGCTCAGGGGTTCCCACCTTaGTCAAGACAGGACACATCTCTGCATTTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RGAPSPAQGFPP*SRQDTSLHLHL
Trigger: AAGATGCAAATGCAGAGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTGAGCTGGAGAAGGGGCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCTGCAGAATCCCACTaGAGCTGGTTGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSAESH*SWLQRA
Trigger: CGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGAAAGAGCTGGATTCTaGAGTATCTCGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFERAGF*SISSQG
Trigger: ACCTTGGCTCGAGATACTTCAGAATCCAGCTCTTTC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCGAGAGACACAGCCCTaGGCCTCCTTCTCGATTTTT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLRETQP*ASFSIF
Trigger: AAAAATCGAGAAGGAGGCTCAGGGCTGTGTCTCTCG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGCTCTGGCCCAAACTaGGCAGGCAGTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHCSGPN*AGSSSK
Trigger: TTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCTCTGTTGGTCAGCTaGCCTTCGGACCCATTATCT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSLLVS*PSDPLS
Trigger: AGATAATGGGTCCGAAGGTCAGCTGACCAACAGAGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAACACGTCTGGGCTATaGAACTGTGGCACGACTGCT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPNTSGL*NCGTTA
Trigger: AGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCCGTGTTGGAGATGGTaGCCATGGCCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDPCWRW*PWPCSL
Trigger: CAGTGAGCAAGGCCATGGTCACCATCTCCAACACGG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCTCATTCATTGTCTTTaGTGCCCCAGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLIHCL*CPSTEG
Trigger: GCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAAATATGGCTCTGGTaGATTGGTTCCAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELREIWLW*IGSSFR
Trigger: ACGAAAGCTGGAACCAATTCACCAGAGCCATATTTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCAAAGCCAGACTCGTaGCCCAGGGAGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKAKPDS*PRELAS
Trigger: GGAAGCCAGCTCCCTGGGTCACGAGTCTGGCTTTGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCTCGCAGGTGGGAACTaGAAGCCCATGATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAALAGGN*KPMIKQ
Trigger: TTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGAGACAGCTTCCTCGTaGTGTAGAGGGGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPETASS*CRGEFK
Trigger: CTTGAATTCCCCTCTACATCACGAGGAAGCTGTCTC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGAGACAGCTTCCTCGTaGTGTAGAGGGGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCETASS*CRGEFK
Trigger: CTTGAATTCCCCTCTACATCACGAGGAAGCTGTCTC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCGTATAAGACTTTTTaGACCTCCACCCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFAYKTF*TSTLDG
Trigger: ACCATCCAGGGTGGAGGTTCAAAAAGTCTTATACGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAAGGTTTGTATGCAATaGAGGCTTGATACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRKVCMQ*RLDTAP
Trigger: TGGGGCAGTATCAAGCCTTCATTGCATACAAACCTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCAGGAATTGAATGTTaGACCATTAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSGIEC*TIRKRL
Trigger: CAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCACCTGGAGTTTGTCGTaGATCACAGCCGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCTWSLS*ITAEKA
Trigger: TGCTTTCTCGGCTGTGATTCACGACAAACTCCAGGT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCGTACAAGGTGATCTaGTTCTTCCGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSYKVI*FFRGST
Trigger: GGTGGACCCACGGAAGAAGCAGATCACCTTGTACGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTCTGCCACGGTGCCTaGACACACTTCAGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLCHGA*THFSLR
Trigger: TCTCAGGCTGAAGTGTGTGCAGGCACCGTGGCAGAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGACTGGATCACCTCTaGCACGGTGCCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRLDHL*HGACTH
Trigger: GTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCTCTGGTTCTGCAGCTaGGTGCCGCAGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKLWFCS*VPQMGS
Trigger: GGACCCCATCTGCGGCACGCAGCTGCAGAACCAGAG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCTGTTGGTGGCTCCTaGGGGAGGCAATGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPVGGS*GRQWRH
Trigger: ATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGCCTCTCCTGCCTCTaGGGGCCGGCTGTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSLSCL*GPAVAP
Trigger: CGGGGCGACAGCCGGCCCGCAGAGGCAGGAGAGGCT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCAGTCCAGCCTCTCCTaGAGCTCGGCAAACGTGTTG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDQSSLS*SSANVL
Trigger: CAACACGTTTGCCGAGCTGCAGGAGAGGCTGGACTG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTTCGAAAGGAAAGCTaGTGGGCTCCTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLRKES*WAPRCR
Trigger: ACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTCTGGGTGTAGACTTTaGATCTCTGGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSGCRL*ISGKES
Trigger: GCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGAGTAGCTGCCTGCTaGTCATCATCGACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGVAAC*SSSTGV
Trigger: AACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCACTGCTCACCCTCACTaGCCGCGCTCATCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESTAHPH*PRSSRS
Trigger: TGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGTCCTGCTCCTGCTCTaGTCTGGTCTCAGCATTCGA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKVLLLL*SGLSIR
Trigger: TCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGAC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGAGCTTGCTGCTGCTaGTGGCGTCCTTCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRACCC*WRPSSC
Trigger: GCAAGACGAAGGACGCCAGCAGCAGCAGCAAGCTCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCAGCGAGTTGCTTCTaGTGGCCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPASCF*WPAAPA
Trigger: AGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGCTGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGCGCCCGCGCCACCCTaGAGCAGCTCCGAGATGCGC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVAPAPP*SSSEMR
Trigger: GCGCATCTCGGAGCTGCTGCAGGGTGGCGCGGGCGC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGCCGCCCACGGAGCTaGTGTTCTCGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCRPRS*CSRSWS
Trigger: ACTCCACGAGCGAGAACAGCAGCTCCGTGGGCGGCA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACGGTGTTTGACGTTTaGACCTTTCCTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTVFDV*TFPTEN
Trigger: GTTTTCTGTAGGAAAGGTGCAAACGTCAAACACCGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCTAAAGGAAGGCAGTaGAGCATGGAAGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPAKGRQ*SMEGTS
Trigger: TGAGGTTCCTTCCATGCTGCACTGCCTTCCTTTAGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGCATTGAACAAATCTaGAGATTTGTCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCCIEQI*RFVSLA
Trigger: GGCAAGGCTGACAAATCTGCAGATTTGTTCAATGCA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTTTGTTTCATTTGGTaGAGAGAAAAGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLCFIW*REKWAV
Trigger: CACAGCCCACTTTTCTCTGCACCAAATGAAACAAAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGGGCTCGCGGCCGCTaGCGGGAAGGTGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKRARGR*REGGRA
Trigger: GGCTCTCCCACCTTCCCGGCAGCGGCCGCGAGCCCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGCCCGGGGAGCCTGTaGCGAAGCCCGGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSPGSL*RSPESR
Trigger: GCGGCTCTCCGGGCTTCGGCACAGGCTCCCCGGGCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACGTCGTAGTGCTCACTaGCGGCTGCCTGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRRSAH*RLPAPT
Trigger: CGTTGGAGCAGGCAGCCGGCAGTGAGCACTACGACG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGCGGAAGGCTTGTCTaGATTGTAGCGGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGGRLV*IVAVQH
Trigger: GTGCTGAACCGCTACAATGCAGACAAGCCTTCCGCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCCGTTGACCACAGACTaGATCACCTCTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDPLTTD*ITSATV
Trigger: CACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGGATTTTCCCAGTTTaGCGTGGCCGAAACAGAACA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRIFPV*RGRNRT
Trigger: TGTTCTGTTTCGGCCACGCCAAACTGGGAAAATCCT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCCTGCGGGAGGCAATaGCGGCATCCAGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSCGRQ*RHPGKR
Trigger: CCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTCGATGCAATCTGGATaGTGGACAGGGTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSMQSG*WTGSPR
Trigger: ACGCGGAGACCCTGTCCACCATCCAGATTGCATCGA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCAGGGCCTTCTCTGTTaGTCAGCTGACCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDQGLLC*SADLRT
Trigger: GGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACACCGTTCAGCTCCAGTaGCTGCTGCACCGTCACCAT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDTVQLQ*LLHRHH
Trigger: ATGGTGACGGTGCAGCAGCCACTGGAGCTGAACGGT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGACGGGGGCCGTGCTaGAGTAGCACTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRRGPC*SSTPGP
Trigger: AGGACCTGGAGTGCTACTCCAGCACGGCCCCCGTCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTGGGCTATGAAACTGTaGCACGACTGCTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLWAMKL*HDCSPS
Trigger: TGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTGTTCCGGGGGCTCATaGCAATGCAGGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKCSGGS*QCRGKL
Trigger: CAGTTTACCCCTGCATTGCCATGAGCCCCCGGAACA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGGACTGGGCTAATGTaGGGCCTGCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGTGLM*GLLWGW
Trigger: CCACCCCCAAAGCAGGCCCCACATTAGCCCAGTCCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTGCACCCACCCCGTTaGTCTCAGCAGCGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLHPPR*SQQRSN
Trigger: ATTACTGCGCTGCTGAGACCAACGGGGTGGGTGCAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGCCGCTAGGCTCGTCTaGGAGGCCCGCCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVAARLV*EARREG
Trigger: GCCTTCCCGGCGGGCCTCCCAGACGAGCCTAGCGGC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGCCGCTAGGCTCGTCTaGGAGGCCCGCCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKAARLV*EARREG
Trigger: GCCTTCCCGGCGGGCCTCCCAGACGAGCCTAGCGGC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGGACTGGCCGGCCTTaGGCGAGGCCCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTWTGRP*ARPRSW
Trigger: CCAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGGACTGGCCGGCCTTaGGCGAGGCCCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVWTGRP*ARPRSW
Trigger: CCAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGACGCCTGTGCTGTTaGGGGGTTTTCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGRLCC*GVFSQG
Trigger: CCCCTGTGAGAAAACCCCCCAACAGCACAGGCGTCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCAGTCTCACAGGGCTTaGACACCCCTCGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKQSHRA*TPLGLP
Trigger: GGGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGGGCCACGCAAACTGTaGATTTGTGGGTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLGPRKL*ICGSRN
Trigger: GTTCCTTGACCCACAAATCCACAGTTTGCGTGGCCC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGATGGCTCTGGTGAATTaGTTCCAGCTTTCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRMALVN*FQLSFK
Trigger: CTTGAACGAAAGCTGGAACCAATTCACCAGAGCCAT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAAGCCTGTCCCTTCTTaGCATAGAGGCTTTGGGACA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAKPVPS*HRGFGT
Trigger: TGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTGGGAGCCAAGACCTaGACATCCATAGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCLGAKT*TSIVFS
Trigger: GCTGAAGACTATGGATGTCCAGGTCTTGGCTCCCAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTTCAGCCAGCAGATTTaGGCATGTCTCCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFFSQQI*ACLLFA
Trigger: TGCAAACAGGAGACATGCCCAAATCTGCTGGCTGAA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCAAACTCGAAGGATTaGCTTCCCTTTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPANSKD*LPFGSR
Trigger: TCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGACTGCTTCAGAATaGTCAGCCGGAACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGTASE*SAGTPS
Trigger: GGAAGGAGTTCCGGCTGACCATTCTGAAGCAGTCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAACCAAGGGGAGACCTaGAACTATCATGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCNQGET*NYHVWP
Trigger: TGGCCAGACATGATAGTTCCAGGTCTCCCCTTGGTT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGTTAAGAATGGCAACTaGCGAATAAACAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGVKNGN*RINNGQ
Trigger: CTGCCCGTTGTTTATTCGCCAGTTGCCATTCTTAAC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTTGAACCTCCACCCTaGATGGTAGATGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFEPPP*MVDAAG
Trigger: TCCAGCCGCATCTACCATCCAGGGTGGAGGTTCAAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGATACACACCCAAGTaGGCACAACTGCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRRYTPK*AQLHFW
Trigger: CCAAAAATGCAGTTGTGCCCACTTGGGTGTGTATCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTCTATCCAAAGAAGGTaGCTGGTTTACAAGGACATG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRSIQRR*LVYKDM
Trigger: CATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCAGCTTTGTTTCATTTaGTGCAGAGAAAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCQLCFI*CREKWA
Trigger: AGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCATTGCTGCAGGTTCTaGGTAGGGCCACCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKHCCRF*VGPPKS
Trigger: GCTTTTGGGTGGCCCTACCCAGAACCTGCAGCAATG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGGATCTTTCCCATTTaGCTGCTTACTACAGAAACA +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGIFPI*LLTTET
Trigger: TGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGCGCTGCGGGCTTGGTaGGCGAGCAGACTTCATTCA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESALRAW*ASRLHS
Trigger: TGAATGAAGTCTGCTCGCCCACCAAGCCCGCAGCGC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGACTGGTGGCCATCTaGAGGCTGACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGLVAI*RLTLAW
Trigger: CCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTATCAGCTGGGAGATCTaGTATGGGTACAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPISWEI*YGYRVT
Trigger: GGTCACCCTGTACCCATACCAGATCTCCCAGCTGAT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTCTCTGTCATCAGCTaGGAGATCTGGTATGGGTAC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLSVIS*EIWYGY
Trigger: GTACCCATACCAGATCTCCCAGCTGATGACAGAGAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGACAGATTTAACTTCTaGGCAGCTCGTGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRDRFNF*AARAKK
Trigger: CTTCTTTGCACGAGCTGCCCAGAAGTTAAATCTGTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGAAGGCTGCTGGACTTaGCGCTTTTGTTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKEGCWT*RFCWDA
Trigger: TGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAATAAGCCTCCGTCTCTaGGAACCTGGATTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGISLRL*EPGLER
Trigger: ACGCTCCAATCCAGGTTCTCAGAGACGGAGGCTTAT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTACGGGCAGAGTGTTCTaGTTCCAAATCCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPTGRVF*FQIRKR
Trigger: TCTCTTCCGGATTTGGAATCAGAACACTCTGCCCGT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATCAGCAGTGGCCAATaGTATAGACGGCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCISSGQ*YRRLCL
Trigger: CAAACACAGCCGTCTATATCATTGGCCACTGCTGAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTAAGCCCTGTGCATTaGGGATTGGACCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLSPVH*GLDPNP
Trigger: GGGATTAGGGTCCAATCCTCAATGCACAGGGCTTAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCCATTAGGAAGAGGCTaGGTCCTCTTCCGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDPLGRG*VLFRAS
Trigger: GCTTGCACGGAAGAGGACTCAGCCTCTTCCTAATGG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCAGGAATTGAATGTTaGACCATTAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSGIEC*TIRKRL
Trigger: CAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTACTCGGGCCAGTCAATaGCTAGACTTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPTRASQ*LDFSFF
Trigger: GAAGAAACTGAAGTCTAGTCATTGACTGGCCCGAGT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTGGTGCAATATGATCTaGTGGGAAGAATCCAATAAG +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRWCNMI*WEESNK
Trigger: CTTATTGGATTCTTCCCATCAGATCATATTGCACCA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTATACCTGGTGCAATATaGTCTGATGGGAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGIPGAI*SDGKNP
Trigger: TGGATTCTTCCCATCAGATCATATTGCACCAGGTAT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGAACTAATAATGTTTTaGATGGCCCCAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCELIMF*MAPVFH
Trigger: ATGGAAGACTGGGGCCATTCAAAACATTATTAGTTC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTCAACTGGTTCAGGTaGGTGGCGCAAATGTCACAG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPFNWFR*VAQMSQ
Trigger: CTGTGACATTTGCGCCACTCACCTGAACCAGTTGAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGGGGAGGGGAGGTCTaGAGAATCCCACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGGGEV*RIPLKL
Trigger: CAGCTTCAGTGGGATTCTGCAGACCTCCCCTCCCCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGTCTTGTGGAAAAACTaGATCGAAGGCAAACATCTT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCVLWKN*IEGKHL
Trigger: AAGATGTTTGCCTTCGATGCAGTTTTTCCACAAGAC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATGTCAGAGAGGGCCGTaGCGTTGGGCCCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRCQRGP*RWARCR
Trigger: TCTACATCGGGCCCAACGGCACGGCCCTCTCTGACA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGAGCGTCTGCTCCCTaGGTCCTGGGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRASAP*VLGLLI
Trigger: GATGAGAAGGCCCAGGACGCAGGGAGCAGACGCTCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCCATTGCCTCCCCGTaGCCAAAACACGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKAIASP*PKHVWA
Trigger: AGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCCTTGGGCTTCTCTCTaGACACCACAGCGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDPWASL*TPQRCS
Trigger: AGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCGTCCTTGCCCGCGTaGAGCCGGGAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPSLPA*SRELTE
Trigger: CTCCGTGAGCTCCCGGCTGCACGCGGGCAAGGACGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCGTCCTTGCCCGCGTaGAGCCGGGAGCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPSLPA*SRELTE
Trigger: CTCCGTGAGCTCCCGGCTGCACGCGGGCAAGGACGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCCTGGCCCACCGCCTaGGGCAGGGACTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPWPTA*GRDLVE
Trigger: CTCCACCAAGTCCCTGCCGCAGGCGGTGGGCCAGGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATCGCTCGTGGAGTCCTaGGCCGAGGACGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSLVES*AEDALP
Trigger: CGGCAGCGCGTCCTCGGCGCAGGACTCCACGAGCGA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTATCGAGGTCACCTGCTaGTCCAAACCTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPIEVTC*SKPTLE
Trigger: TTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGAT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAAGGGAAGCGTGCTCTaGACACGCCTAAGTACCATC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGKGSVL*TRLSTI
Trigger: GATGGTACTTAGGCGTGTGCAGAGCACGCTTCCCTT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCTAAAGGAAGGCAGTaGAGCATGGAAGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHAKGRQ*SMEGTS
Trigger: TGAGGTTCCTTCCATGCTGCACTGCCTTCCTTTAGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTCCCGTGACTGGGACTaGTTCAGAATGGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESSRDWD*FRMVSR
Trigger: CCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGTTGATATTCCCCCTTaGCTCCTTGGGTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPVDIPP*LLGFSI
Trigger: GATAGAGAACCCAAGGAGGCAAGGGGGAATATCAAC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGACAGGACACATCTCTaGATTTGCATCTTAATGCTC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPADRTHL*ICILML
Trigger: GAGCATTAAGATGCAAATGCAGAGATGTGTCCTGTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGCTTGCAAAGGCCCATaGACAAAACTAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPACKGP*TKLACQ
Trigger: TTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGCGCGACTCCTCGTATaGTTTCCGGTACCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDARLLV*FPVPAF
Trigger: GAAAGCTGGTACCGGAAAGCATACGAGGAGTCGCGC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGGAGCCCACCCACGTaGCGGGACCCCACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTWSPPT*RDPTRV
Trigger: CACCCTGGTGGGGTCCCGGCACGTGGGTGGGCTCCA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGCTGCTGGGTTTGCTaGCGTGCTTGTTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGCWVC*RACWRS
Trigger: GCTTCGCCAACAAGCACGGCAGCAAACCCAGCAGCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGACAGATTTAACTTCTaGGCAGCTACTGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGDRFNF*AATAFQ
Trigger: TTGGAAAGCAGTAGCTGCCCAGAAGTTAAATCTGTC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366518.4
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGAAGGCAAACATCTTTaGAGGAACCTGGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAEGKHL*RNLVAS
Trigger: AGAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGCCCAGGTTCTGCATaGAATCATCCTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAACPGSA*NHPFRS
Trigger: TGATCGGAAAGGATGATTCCATGCAGAACCTGGGCA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTACACGCCCGGGGACTaGCCGTCCTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISYTPGD*PSCRLP
Trigger: GGGCAGCCTGCAGGACGGCCAGTCCCCGGGCGTGTA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGTGCGCGATCATGGTaGTACGGCAGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGCARSW*YGSSCS
Trigger: GGAACATGAACTGCCGTACCACCATGATCGCGCACA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGATGTGCGCGATCATaGTGGTACGGCAGTTCATGT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHRCARS*WYGSSC
Trigger: ACATGAACTGCCGTACCACCATGATCGCGCACATCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATCAGACTCAGAGAGTaGGCTTGCCCCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESIRLRE*ACPRCL
Trigger: CAAGCAGCGGGGGCAAGCCCACTCTCTGAGTCTGAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCAGGGCCTTCTCTGTTaGTCAGCTGACCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESQGLLC*SADLRT
Trigger: GGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTGGGCTATGAAACTGTaGCACGACTGCTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKWAMKL*HDCSPS
Trigger: TGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGCCCAAAACACGTCTaGGCTATGAAACTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPCPKHV*AMKLWH
Trigger: GTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCATTCGAGGGGCCCGTaGCAGTCTCACACCTCATCA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESHSRGP*QSHTSS
Trigger: TGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGCACGGGGCTCTGGGTaGCCAAACCGGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISARGSG*PNRAGP
Trigger: TGGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCGAGTTGCTTCTGCTaGCCAGCTGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKASCFC*PAAPAW
Trigger: CCAAGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTCTGAGAACCTGGATTaGAGCGTTTCTTCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSENLD*SVSSGS
Trigger: AGACCCCGAAGAAACGCTCCAATCCAGGTTCTCAGA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCACAATCAACCTTCTaGGTCTACCTGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPQSTF*VYLTTL
Trigger: CAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAAGCCTGTCCCTTCTTaGCATAGAGGCTTTGGGACA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPKPVPS*HRGFGT
Trigger: TGTCCCAAAGCCTCTATGCCAAGAAGGGACAGGCTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAGTLRF*AALSSA
Trigger: TGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACT +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARSRLL*KVQSQT
Trigger: AGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCACACTTGTCAGACTTaGGAGATACACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFHTCQT*EIHRRK
Trigger: CTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACAACCAGCAGCCCAATaGCAAACTCGAAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGQPAAQ*QTRRIG
Trigger: GCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAACCAGGCTCTGTCACTaGCTAAAGGAAGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGTRLCH*LKEGSA
Trigger: TGCACTGCCTTCCTTTAGCCAGTGACAGAGCCTGGT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGATGGTAGATGCGGCTaGACTGAAGTCACTACCGCC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDDGRCG*TEVTTA
Trigger: GGCGGTAGTGACTTCAGTCCAGCCGCATCTACCATC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCAGCTTTGTTTCATTTaGTGCAGAGAAAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGQLCFI*CREKWA
Trigger: AGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTGGGATCTTTCCCATTTaGCTGCTTACTACAGAAACA +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGGIFPI*LLTTET
Trigger: TGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCC...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGCAAGCCGGTGGGCGTaGATTTCCAAGCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESASRWA*ISKPIL
Trigger: GAGAATGGGCTTGGAAATCCACGCCCACCGGCTTGC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAGGTTTTCTGTCCTATaGAATATATCACGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRRFSVL*NISRTG
Trigger: TCCTGTCCGTGATATATTCCATAGGACAGAAAACCT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCACAATAAATGCACCTaGGCAGACCTTGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCHNKCT*ADLVST
Trigger: AGTGGAGACAAGGTCTGCCCAGGTGCATTTATTGTG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCCCAGTCTTCCATCTaGTTAAACAGTGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPQSSI*LNSGFQ
Trigger: CTGAAATCCACTGTTTAACCAGATGGAAGACTGGGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCTACCGAATTCATGGTaGCTTTTCCAGAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFLPNSW*LFQRRV
Trigger: TACTCTCCTCTGGAAAAGCCACCATGAATTCGGTAG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTGGGAGATCTGGTATaGGTACAGGGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLGDLV*VQGDPV
Trigger: AACGGGGTCACCCTGTACCCATACCAGATCTCCCAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGATCAGCTGGGAGATCTaGTATGGGTACAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKISWEI*YGYRVT
Trigger: GGTCACCCTGTACCCATACCAGATCTCCCAGCTGAT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGTCCTTCACCTTGTTaGCAGCCCTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCPSPC*QPSAGR
Trigger: CCTGCCTGCTGAGGGCTGTCAACAAGGTGAAGGACA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGCCATCTGCCCCGTTaGCCACAGACTGGATCACCT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSHLPR*PQTGSP
Trigger: AGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCATCTCAGACAGGATaGGCAAGTTGTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPSQTG*ASCRGW
Trigger: CCAGCCCCGACAACTTGCTCATCCTGTCTGAGATGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACCGCTGGCACTGTGCTaGGGGCTGGCCCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVPLALC*GLARFF
Trigger: GAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACATAAGCCTCCGTCTCTaGGAACCTGGATTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDISLRL*EPGLER
Trigger: ACGCTCCAATCCAGGTTCTCAGAGACGGAGGCTTAT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCAAGTCAAATTCACTaGGCCACTTGTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPSQIH*ATCWDP
Trigger: TGGATCCCAACAAGTGGCTCAGTGAATTTGACTTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTCATTCATTGTCTTTaGTGCCCCAGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLIHCL*CPSTEG
Trigger: GCCCTCTGTGCTGGGGCATCAAAGACAATGAATGAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGTTGTTTTCATCTTaGCTAGCACCATCTGTACAC +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLLFSS*LAPSVH
Trigger: GTGTACAGATGGTGCTAGTCAAGATGAAAACAACAA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGTCCAGAGGTACACTaGCCAAGAAACGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAACPEVH*PRNVVF
Trigger: AAACACTACGTTTCTTGGTCAGTGTACCTCTGGACA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGGTTTACAAGGACATaGGATACACACCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPWFTRT*DTHPSG
Trigger: CCCACTTGGGTGTGTATCTCATGTCCTTGTAAACCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTATCAGCAGTGGCCAATaGTATAGACGGCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPISSGQ*YRRLCL
Trigger: CAAACACAGCCGTCTATATCATTGGCCACTGCTGAT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGCAGGAAAGAACAATaGGTACAGGCAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSRKEQ*VQAGLL
Trigger: AAGGAGTCCTGCCTGTACTCATTGTTCTTTCCTGCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCCGTGTGGTGGCATTaGAGAGTGTCCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPVWWH*RVSFMG
Trigger: CCCCATGAAGGACACTCTTCAATGCCACCACACGGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTGTGTCCAGTGTTATaGCATTGCTGCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLCPVL*HCCRFW
Trigger: CCAGAACCTGCAGCAATGTCATAACACTGGACACAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGCATAATAAGTAAATaGGAGAACACGAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCCIISK*ENTSNA
Trigger: AGCATTGCTCGTGTTCTCTCATTTACTTATTATGCA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTGGTGCAATATGATCTaGTGGGAAGAATCCAATAAG +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAWCNMI*WEESNK
Trigger: CTTATTGGATTCTTCCCATCAGATCATATTGCACCA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTATACCTGGTGCAATATaGTCTGATGGGAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFIPGAI*SDGKNP
Trigger: TGGATTCTTCCCATCAGATCATATTGCACCAGGTAT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGAACTAATAATGTTTTaGATGGCCCCAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRELIMF*MAPVFH
Trigger: ATGGAAGACTGGGGCCATTCAAAACATTATTAGTTC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAACCTGGAGTTTGTCGTaGATCACAGCCGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGTWSLS*ITAEKA
Trigger: TGCTTTCTCGGCTGTGATTCACGACAAACTCCAGGT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTTCTGGGCAGCTACTaGTTTCCAATCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLLGSY*FPIHHH
Trigger: ATGATGATGGATTGGAAAGCAGTAGCTGCCCAGAAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366518.4
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCCACTGAAGCTGGTTaGAAAGAGCGGTGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPTEAG*KERWFG
Trigger: GCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCGTACAAGGTGATCTaGTTCTTCCGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSYKVI*FFRGST
Trigger: GGTGGACCCACGGAAGAAGCAGATCACCTTGTACGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTGGAGGAACCTGGTTaGCTCTCTTTTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLEEPG*LSFGRH
Trigger: ATGCCTTCCAAAAGAGAGGCAACCAGGTTCCTCCAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGAACACGTGTGAGTTaGGGTGGTCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRTRVS*GGRPHH
Trigger: GTGATGAGGACGACCACCGCAACTCACACGTGTTCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGGTGGGCCTGCGCATaGGGCCTTCTTCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGWACA*GLLRRS
Trigger: GCTCCTGCGAAGAAGGCCGCATGCGCAGGCCCACCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTTCGAAAGGAAAGCTaGTGGGCTCCTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLRKES*WAPRCR
Trigger: ACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGCTGCTGGTGCCGCTaGCGCTGGCACTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGCWCR*RWHCAE
Trigger: CTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGCTGCTGGTGCCGCTaGCGCTGGCACTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGCWCR*RWHCAE
Trigger: CTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCAGGGGGCTGCTGGTaGCGCTGCCGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSGGCW*RCRWHC
Trigger: ACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACAAGGCCCCTCGGGCTaGTCCGCAAGGGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVQGPSG*SARGHP
Trigger: TGGATGGCCCCTTGCGGAGCAGCCCGAGGGGCCTTG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCGCCCGCTCCAGACTTaGCACCAACCTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRPLQT*HQPSSS
Trigger: TGAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACACCCTGGATGGTAGATaGGGCTGGACTGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDTLDGR*GWTEVT
Trigger: AGTGACTTCAGTCCAGCCGCATCTACCATCCAGGGT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCAGATTTGTCAGCCTTaGCTTCTATCCAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFQICQP*LLSKEG
Trigger: ACCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAATCCAAAGAAACACTaGCCCCACCAAAATTTGAGA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRNPKKH*PHQNLR
Trigger: TCTCAAATTTTGGTGGGGGCAGTGTTTCTTTGGATT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTCTGGCACAATAAATaGACCTGGGCAGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLFWHNK*TWADLV
Trigger: GACAAGGTCTGCCCAGGTGCATTTATTGTGCCAGAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTCTGGCACAATAAATaGACCTGGGCAGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPFWHNK*TWADLV
Trigger: GACAAGGTCTGCCCAGGTGCATTTATTGTGCCAGAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGGGCTGCTGGGACCTaGCCAAGTACAGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGAAGT*PSTEEL
Trigger: CAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATCGACAGGGACCAGGTaGCATCCAGGTACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSTGTR*HPGTGE
Trigger: CTCACCAGTACCTGGATGGCACCTGGTCCCTGTCGA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTATCTTTGGAGGAACCTaGTTGCCTCTCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPIFGGT*LPLFWK
Trigger: CTTCCAAAAGAGAGGCAACCAGGTTCCTCCAAAGAT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTGAGAAGCGTCTTGTaGAAAAACTGCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLRSVL*KNCIEG
Trigger: GCCTTCGATGCAGTTTTTCCACAAGACGCTTCTCAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACACTCTCGATGCAATCTaGATGGTGGACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDTLDAI*MVDRVS
Trigger: GGAGACCCTGTCCACCATCCAGATTGCATCGAGAGT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCCCGCCGGACGAGCTaGATGTGTACTTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPRRTS*MCTSSS
Trigger: AGAAGACGAAGTACACATCCAGCTCGTCCGGCGGGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGATAGGGACAAAGTCTaGGGGGCCCTCGTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRDRDKV*GALVVG
Trigger: ACCGACAACGAGGGCCCCCCAGACTTTGTCCCTATC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAATCAGACTCAGAGAGTaGGCTTGCCCCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRIRLRE*ACPRCL
Trigger: CAAGCAGCGGGGGCAAGCCCACTCTCTGAGTCTGAT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTCTCCCGGCTGCTCTaGAGGCTGGGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLSRLL*RLGLCT
Trigger: CGTGCAGAGCCCCAGCCTCCAGAGCAGCCGGGAGAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTCTCCCGGCTGCTCTaGAGGCTGGGGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLSRLL*RLGLCT
Trigger: CGTGCAGAGCCCCAGCCTCCAGAGCAGCCGGGAGAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGTACTCCGAGGTCTTaGACAGGCTGGCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCTPRS*TGWRCP
Trigger: TGGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACCGTTCAGCTCCAGTaGCTGCTGCACCGTCACCAT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTVQLQ*LLHRHH
Trigger: ATGGTGACGGTGCAGCAGCCACTGGAGCTGAACGGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTGTTCCGGGGGCTCATaGCAATGCAGGGGTAAACTG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESCSGGS*QCRGKL
Trigger: CAGTTTACCCCTGCATTGCCATGAGCCCCCGGAACA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTTTGGGGGTGGCGGTaGGGGCCTCCGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLWGWR*GPPALG
Trigger: TCCAAGAGCCGGAGGCCCCCACCGCCACCCCCAAAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCATTCGAGGGGCCCGTaGCAGTCTCACACCTCATCA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKHSRGP*QSHTSS
Trigger: TGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTGCACCCACCCCGTTaGTCTCAGCAGCGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLHPPR*SQQRSN
Trigger: ATTACTGCGCTGCTGAGACCAACGGGGTGGGTGCAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCAGAACACAGTGCTTaGGGGAAGCCACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPEHSA*GKPPSP
Trigger: AGGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACGCGCGCTCTGGGGCTaGCCAGGAGGAGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVRALWG*PGGVCS
Trigger: TGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATGGCTCTGGTGAATTaGTTCCAGCTTTCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCMALVN*FQLSFK
Trigger: CTTGAACGAAAGCTGGAACCAATTCACCAGAGCCAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTTGGGAGCCAAGACCTaGACATCCATAGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLGAKT*TSIVFS
Trigger: GCTGAAGACTATGGATGTCCAGGTCTTGGCTCCCAA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCATTCTCCTTCACCGTaGCCTGCGAGATCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKHSPSP*PARSCE
Trigger: CTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACATTCTCCTTCACCGTaGCCTGCGAGATCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRHSPSP*PARSCE
Trigger: CTCGCAGGATCTCGCAGGCCACGGTGAAGGAGAATG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGTTAAGAATGGCAACTaGCGAATAAACAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPVKNGN*RINNGQ
Trigger: CTGCCCGTTGTTTATTCGCCAGTTGCCATTCTTAAC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGATGGTAGATGCGGCTaGACTGAAGTCACTACCGCC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESDGRCG*TEVTTA
Trigger: GGCGGTAGTGACTTCAGTCCAGCCGCATCTACCATC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTCTATCCAAAGAAGGTaGCTGGTTTACAAGGACATG +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSIQRR*LVYKDM
Trigger: CATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTGTGTGCTCCAAGAATaGGTTACTAGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLCVLQE*VTSPAG
Trigger: TCCTGCTGGACTAGTAACCCATTCTTGGAGCACACA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTGTGCATTGAGGATTaGACCCTAATCCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLCIED*TLIPIL
Trigger: GAGAATAGGGATTAGGGTCCAATCCTCAATGCACAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCTGTGCATTGAGGATTaGACCCTAATCCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAALCIED*TLIPIL
Trigger: GAGAATAGGGATTAGGGTCCAATCCTCAATGCACAG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGCAAGCCGGTGGGCGTaGATTTCCAAGCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRASRWA*ISKPIL
Trigger: GAGAATGGGCTTGGAAATCCACGCCCACCGGCTTGC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAGTAGCACTAGGGGTTaGATGGGAGTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSSTRG*MGVLGK
Trigger: TTTCCCTAAGACTCCCATCCAACCCCTAGTGCTACT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCACACCTTAGAGGAATaGTATGTGTTCATGTCTACA +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAHTLEE*YVFMST
Trigger: TGTAGACATGAACACATACCATTCCTCTAAGGTGTG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCAGCTACCGAATTCATaGTGGCTTTTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPQLPNS*WLFQRR
Trigger: TCTCCTCTGGAAAAGCCACCATGAATTCGGTAGCTG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACATTTCTTGCCCCTGGTaGAGACCGCAAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDISCPW*RPQASL
Trigger: AAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAAT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCAGTCTCTGGGCTGCTaGAGCCCACCCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISQSLGC*SPPTCR
Trigger: CCGGCACGTGGGTGGGCTCCAGCAGCCCAGAGACTG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp GCAGCCCAATGGCAAACTCGAAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAGGATATTACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: AAQWQTRRIGFP*GPEASKDITVK
Trigger: CTTAACAGTAATATCCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCCATTGGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTaGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFL*MLSQKGSCSDP
Trigger: GGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAACAGATGCGAAGCATaGCTTTCACCTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESNRCEA*LSPCPA
Trigger: GGCTGGGCAAGGTGAAAGTCATGCTTCGCATCTGTT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGATGGCACAGGGAATaGTGCCCAGGTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRWHRE*CPGSAW
Trigger: CCATGCAGAACCTGGGCATCATTCCCTGTGCCATCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATGTGAAGAACACGTGTaGGTTGCGGTGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRCEEHV*VAVVVL
Trigger: GAGGACGACCACCGCAACTCACACGTGTTCTTCACA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACGAAGCCGCAGGAGTTaGGGCTCTCCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVRSRRS*GSPGCS
Trigger: AGAGCAGCCGGGAGAGCCTCAACTCCTGCGGCTTCG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCGAAGCCGCAGGAGTTaGGGCTCTCCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRSRRS*GSPGCS
Trigger: AGAGCAGCCGGGAGAGCCTCAACTCCTGCGGCTTCG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCGAAGCCGCAGGAGTTaGGGCTCTCCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISRSRRS*GSPGCS
Trigger: AGAGCAGCCGGGAGAGCCTCAACTCCTGCGGCTTCG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGCCGGCTGGCCTTCTaGAAGGCCCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCRLAF*KALGRL
Trigger: CAGCCTTCCCAGGGCCTTTCAGAAGGCCAGCCGGCA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGCATTCGTAGTGGCTaGCTGTCGCCCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGIRSG*LSPCPA
Trigger: CGCTGGGCAGGGCGACAGTCAGCCACTACGAATGCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAATGAATATGAATTTTaGGGGCCACGCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAANEYEF*GPRKLW
Trigger: CCACAGTTTGCGTGGCCCTCAAAATTCATATTCATT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCTATCCAGGGTCGTGTaGGTTATGGAGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKLSRVV*VMEGKL
Trigger: GAGCTTCCCCTCCATAACTCACACGACCCTGGATAG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATCAGGGAAATCCCTTaGCCACTCTGTACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESIREIP*PLCTPG
Trigger: ACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAAGGATCAGGTCATGTaGAGCTCACAAGACTTCGGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGKDQVM*SSQDFG
Trigger: ACCGAAGTCTTGTGAGCTTCACATGACCTGATCCTT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTTTATCAGAAAGTCTaGGCAGCAAGCGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCFYQKV*AASVRL
Trigger: AAGTCTCACGCTTGCTGCTCAGACTTTCTGATAAAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCTGTGTCCAGTGTTATaGCATTGCTGCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLCPVL*HCCRFW
Trigger: CCAGAACCTGCAGCAATGTCATAACACTGGACACAG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTATGCAATGAAGGCTTaGTACTGCCCCAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESYAMKA*YCPKPH
Trigger: GTGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAAGGTTTGTATGCAATaGAGGCTTGATACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLKVCMQ*RLDTAP
Trigger: TGGGGCAGTATCAAGCCTTCATTGCATACAAACCTT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCAGGAATTGAATGTTaGACCATTAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSGIEC*TIRKRL
Trigger: CAGCCTCTTCCTAATGGTTCAACATTCAATTCCTGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGAACTAATAATGTTTTaGATGGCCCCAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFELIMF*MAPVFH
Trigger: ATGGAAGACTGGGGCCATTCAAAACATTATTAGTTC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTCTCAAATGTCTCTTaGAGATCTGGGGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLSNVS*RSGAIS
Trigger: TGAGATGGCCCCAGATCTGCAAGAGACATTTGAGAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366518.4
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTTGGAGGAACCTGGTTaGCTCTCTTTTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLEEPG*LSFGRH
Trigger: ATGCCTTCCAAAAGAGAGGCAACCAGGTTCCTCCAA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATCGCCCCGGGTCTTCTaGAGGGCTGGCACGATAGGG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSPRVF*RAGTIG
Trigger: CCCTATCGTGCCAGCCCTGCAGAAGACCCGGGGCGA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGCTGGGCTCCTCGCTaGCGTCGATGCAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTCWAPR*RRCSPA
Trigger: GGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCCTTTGATGGGGGCTaGTTTGTTGAAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKAFDGG*FVERVI
Trigger: GATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGATCGAGGTCACCTGCTaGTCCAAACCTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKIEVTC*SKPTLE
Trigger: TTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGAT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACCTCCTCCCCTGTGCTaGAGGTGCCGTCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKPPPLC*RCRLLT
Trigger: GGTGAGGAGACGGCACCTGCAGCACAGGGGAGGAGG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGCATGCGACTGTCCTaGAGAATGGGGTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSMRLS*RMGSRL
Trigger: TAACCTTGACCCCATTCTGCAGGACAGTCGCATGCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGTTGATATTCCCCCTTaGCTCCTTGGGTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKVDIPP*LLGFSI
Trigger: GATAGAGAACCCAAGGAGGCAAGGGGGAATATCAAC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTATAGACGGCTGTGTTTaGATTGAACAAATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFIDGCV*IEQICR
Trigger: TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTAT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAACGTTTATATAGCTTaGAAAGGCCCATGCACAAAA +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRNVYIA*KGPCTK
Trigger: TTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTATCTTTGGAGGAACCTaGTTGCCTCTCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPIFGGT*LPLFWK
Trigger: CTTCCAAAAGAGAGGCAACCAGGTTCCTCCAAAGAT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTGAGAAGCGTCTTGTaGAAAAACTGCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLRSVL*KNCIEG
Trigger: GCCTTCGATGCAGTTTTTCCACAAGACGCTTCTCAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCATCCTTTCCGATCATaGTGTAGGATTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAHPFRS*CRIFPV
Trigger: AACTGGGAAAATCCTACACCATGATCGGAAAGGATG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTGCCCAGGTTCTGCATaGAATCATCCTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKCPGSA*NHPFRS
Trigger: TGATCGGAAAGGATGATTCCATGCAGAACCTGGGCA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGGGTCTCAGCTGGGTaGGCCTGCGCATGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKRVSAG*ACACGL
Trigger: AAGGCCGCATGCGCAGGCCCACCCAGCTGAGACCCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGGAGCCCATGGGCCTaGGCTTGCCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGSPWA*ACLPRS
Trigger: GCTTCGTGGAAGGCAAGCCCAGGCCCATGGGCTCCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGGAGCCCATGGGCCTaGGCTTGCCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGSPWA*ACLPRS
Trigger: GCTTCGTGGAAGGCAAGCCCAGGCCCATGGGCTCCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGAAGGAGAGCTGGGTaGCTTGTACTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGRRAG*LVLRGL
Trigger: AAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCACCGTCACCATCGTaGTGCTCAGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKAPSPS*CSGSPS
Trigger: AGAAGGAGATCCTGAGCACCACGATGGTGACGGTGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTGCCCAAAACACGTCTaGGCTATGAAACTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDCPKHV*AMKLWH
Trigger: GTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGGGCCTCCGGCTCTTaGATGTTCCGGGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGASGS*MFRGLM
Trigger: CATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCGTCTCTGAGAACCTaGATTGGAGCGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPSLRT*IGAFLR
Trigger: CCGAAGAAACGCTCCAATCCAGGTTCTCAGAGACGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGACATGGCCTCCTTGCTaGCACCCCCTCGTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKTWPPC*HPLVAA
Trigger: AGCGGCGACGAGGGGGTGCCAGCAAGGAGGCCATGT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCTTAATCAGTCATTCTaGGTTGTTTTGTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLNQSF*VVLCSL
Trigger: AAGCGAACACAAAACAACCCAGAATGACTGATTAAG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGGTCGTGTGAGTTATaGAGGGGAAGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGSCEL*RGSSLC
Trigger: GCAGAGAGAGCTTCCCCTCCATAACTCACACGACCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGTTAAGAATGGCAACTaGCGAATAAACAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPVKNGN*RINNGQ
Trigger: CTGCCCGTTGTTTATTCGCCAGTTGCCATTCTTAAC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTCTATCCAAAGAAGGTaGCTGGTTTACAAGGACATG +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSIQRR*LVYKDM
Trigger: CATGTCCTTGTAAACCAGCCACCTTCTTTGGATAGA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACACACGTGTGGACCTTaGGAACAACTATGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGHTCGP*EQLCLE
Trigger: CTCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCACACCTTAGAGGAATaGTATGTGTTCATGTCTACA +
Preference number: 4 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFHTLEE*YVFMST
Trigger: TGTAGACATGAACACATACCATTCCTCTAAGGTGTG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGGTTTTCTGTCCTATaGCCTTTCACCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHRFSVL*PFTMSG
Trigger: ACCTGACATGGTGAAAGGCCATAGGACAGAAAACCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGGAATTCACTGTTTCTaGCACAATAAATGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCGIHCF*HNKCTW
Trigger: CCAGGTGCATTTATTGTGCCAGAAACAGTGAATTCC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCGTATTTCTTGCCCCTaGTGGAGACCGCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRISCP*WRPQAS
Trigger: AGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCACTGGTTCAGGTGAGTaGCGCAAATGTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESTGSGE*RKCHSG
Trigger: ACCGCTGTGACATTTGCGCCACTCACCTGAACCAGT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGGACCCCACCAGGGTaGGGATGTTGGAGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGTPPG*GCWRAV
Trigger: CACCGCTCTCCAACATCCCCACCCTGGTGGGGTCCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGACCCCACCAGGGTaGGGATGTTGGAGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGTPPG*GCWRAV
Trigger: CACCGCTCTCCAACATCCCCACCCTGGTGGGGTCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTAGGCTGACCTTGGCCTaGTGGGTTGGGGACCCGCTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISRLTLA*WVGDPL
Trigger: GAGCGGGTCCCCAACCCACCAGGCCAAGGTCAGCCT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGATGTTCCCATTGCTTaGACTGGTGGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESDVPIA*TGGHLE
Trigger: CTCCAGATGGCCACCAGTCCAAGCAATGGGAACATC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTGTGGAAGTCTCGCTaGCCACGCAGGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLWKSR*PRRSPA
Trigger: CGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGCACACACTTCAGCCTaGGAAGCGTCTTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESAHTSA*EASCGK
Trigger: TTTTCCACAAGACGCTTCTCAGGCTGAAGTGTGTGC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGTAGATGTGCAGTGTaGAGAACACGTGTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGRCAV*RTRVSC
Trigger: GCAACTCACACGTGTTCTTCACACTGCACATCTACC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGCCCTCGTTGTCGGTaGGCTCCTTGTCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGPRCR*APCQRG
Trigger: CCCTCTCTGACAAGGAGCTCACCGACAACGAGGGCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGCTCTGGCCCAAACTaGGCAGGCAGTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCSGPN*AGSSSK
Trigger: TTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAGCTCCTGTTCCTGCTaGGGGACTGCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSSCSC*GTAWTR
Trigger: CCTGGTCCACGCAGTCCCTCAGCAGGAACAGGAGCT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGCCTTGCAGAAGTTaGCACGGCTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGPCRS*HGSPGA
Trigger: AGCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGAAATATGGCTCTGGTaGATTGGTTCCAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGEIWLW*IGSSFR
Trigger: ACGAAAGCTGGAACCAATTCACCAGAGCCATATTTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATGTCCAGAGGTACACTaGCCAAGAAACGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGCPEVH*PRNVVF
Trigger: AAACACTACGTTTCTTGGTCAGTGTACCTCTGGACA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGTTACCCACCAATGTTaGCAGATACTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGVTHQC*QILSGG
Trigger: ACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAAC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGTTACCCACCAATGTTaGCAGATACTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKVTHQC*QILSGG
Trigger: ACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAAC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTAAGCCCTGTGCATTaGGGATTGGACCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLSPVH*GLDPNP
Trigger: GGGATTAGGGTCCAATCCTCAATGCACAGGGCTTAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACACTCGGGCCAGTCAATaGCTAGACTTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDTRASQ*LDFSFF
Trigger: GAAGAAACTGAAGTCTAGTCATTGACTGGCCCGAGT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACCTGTTGGTGGCTCCTaGGGGAGGCAATGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKPVGGS*GRQWRH
Trigger: ATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCCTGCCCAGCGAGTTaGTTCTGCTGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPCPAS*FCWPAA
Trigger: AGCAGCTGGCCAGCAGAAGCAACTCGCTGGGCAGGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATTCCTGCTGAGGGACTaGGTGGACCAGGGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKFLLRD*VDQGVC
Trigger: GCACACGCCCTGGTCCACGCAGTCCCTCAGCAGGAA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTACGGTGTTTGACGTTTaGACCTTTCCTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPTVFDV*TFPTEN
Trigger: GTTTTCTGTAGGAAAGGTGCAAACGTCAAACACCGT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGCATCGAGGTCACCTaGTGCTCCAAACCTACTTTG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGIEVT*CSKPTL
Trigger: CAAAGTAGGTTTGGAGCAGCAGGTGACCTCGATGCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCCAAGTGGGCACAACTaGATTTTTGGTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCPSGHN*IFGQYK
Trigger: TTTGTATTGACCAAAAATGCAGTTGTGCCCACTTGG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGATTAAGGTTTGTATaGAATGAAGGCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: SPEHATVLQNGVKVKELRRLRFV*NEGLIL
Trigger: CAGTATCAAGCCTTCATTGCATACAAACCTTAATCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGATTAAGGTTTGTATaGAATGAAGGCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRLRFV*NEGLIL
Trigger: CAGTATCAAGCCTTCATTGCATACAAACCTTAATCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGTGAGGGGACAAAATaGCTTAAGATTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPSEGTK*LKIVRL
Trigger: GAGTCTTACAATCTTAAGGCATTTTGTCCCCTCACT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGCCTGCCAAGGGGCTaGTGGGACCTGCCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSLPRG*WDLPKY
Trigger: GTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAGGCT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTATTTTACACCTCATATaGCACAAAAAGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAILHLI*HKKSEI
Trigger: GATCTCTGACTTTTTGTGGCATATGAGGTGTAAAAT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGTGCTCACTGCCGGCTaGCTGCTCCAACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKVLTAG*LLQRQH
Trigger: GTGCTGACGTTGGAGCAGGCAGCCGGCAGTGAGCAC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGTCGTAGTGCTCACTaGCGGCTGCCTGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRRSAH*RLPAPT
Trigger: CGTTGGAGCAGGCAGCCGGCAGTGAGCACTACGACG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGATGTGCGCGATCATaGTGGTACGGCAGTTCATGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRCARS*WYGSSC
Trigger: ACATGAACTGCCGTACCACCATGATCGCGCACATCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACCGTGGCCCTGGTGTaGAAGGGTCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTVALV*KGLSWV
Trigger: CACCCAGCTGAGACCCTTCCACACCAGGGCCACGGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGTCAGGGTCCACCGTaGCCCTGGTGTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSQGPP*PWCGRV
Trigger: GACCCTTCCACACCAGGGCCACGGTGGACCCTGACT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGCTGTTCTCGCTCGTaGAGTCCTGCGCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCCSRS*SPAPRT
Trigger: CGTCCTCGGCGCAGGACTCCACGAGCGAGAACAGCA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPRSRLL*KVQSQT
Trigger: AGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTCGCCTCCACACGTGTaGACCTTGGGAACAACTATG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSPPHV*TLGTTM
Trigger: CATAGTTGTTCCCAAGGTCCACACGTGTGGAGGCGA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGTAGCACTAGGGGTTaGATGGGAGTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSSTRG*MGVLGK
Trigger: TTTCCCTAAGACTCCCATCCAACCCCTAGTGCTACT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCATCTGGTTAAACAGTaGATTTCAGACAGTAACATT +
Preference number: 4 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGHLVKQ*ISDSNI
Trigger: AATGTTACTGTCTGAAATCCACTGTTTAACCAGATG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCGAAGCCTGTGTAGTTaGAGGTGGCACAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRSLCS*RWHRGR
Trigger: CCGCCCCCTGTGCCACCTCCAACTACACAGGCTTCG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCTGACCTTGGCCTGGTaGGTTGGGGACCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLTLAW*VGDPLF
Trigger: GAAGAGCGGGTCCCCAACCCACCAGGCCAAGGTCAG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCACCGATGTGCCTGTaGAAGTCTCGCTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPPMCL*KSRWPR
Trigger: GCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGGGCCCGATGTAGATaGCGGTGTCGCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVWARCR*RCRRTA
Trigger: AGCAGTCCTGCGACACCGTCATCTACATCGGGCCCA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCAAATCCGGAAGAGATaGAAGAGACAGCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESQIRKR*KRQLPR
Trigger: ACGAGGAAGCTGTCTCTTTCATCTCTTCCGGATTTG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGCGTATAAGACTTTTTaGACCTCCACCCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESAYKTF*TSTLDG
Trigger: ACCATCCAGGGTGGAGGTTCAAAAAGTCTTATACGC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTGGTTTACAAGGACATaGGATACACACCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESWFTRT*DTHPSG
Trigger: CCCACTTGGGTGTGTATCTCATGTCCTTGTAAACCA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCGGCTGTGTTTGCATTaGACAAATCTGCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKRLCLH*TNLQIC
Trigger: ACAAATCTGCAGATTTGTTCAATGCAAACACAGCCG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTGTGTCCAGTGTTATaGCATTGCTGCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLCPVL*HCCRFW
Trigger: CCAGAACCTGCAGCAATGTCATAACACTGGACACAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCATGGAATAGATGTGTaGGTGTGGTATTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPHGIDV*VWYFST
Trigger: AGTACTGAAATACCACACTCACACATCTATTCCATG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTGGTGCAATATGATCTaGTGGGAAGAATCCAATAAG +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPWCNMI*WEESNK
Trigger: CTTATTGGATTCTTCCCATCAGATCATATTGCACCA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTTTCCGCCCCATTGCTaGCCCCAAGGCTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISFPPHC*PQGCWV
Trigger: AACCCAGCAGCCTTGGGGTCAGCAATGGGGCGGAAA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGGGAGGGGAGGTCTaGAGAATCCCACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGGGEV*RIPLKL
Trigger: CAGCTTCAGTGGGATTCTGCAGACCTCCCCTCCCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGTCTTGTGGAAAAACTaGATCGAAGGCAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLVLWKN*IEGKHL
Trigger: AAGATGTTTGCCTTCGATGCAGTTTTTCCACAAGAC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAGCTCGCTCTGGTTCTaGAGCTGCGTGCCGCAGATG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSSLWF*SCVPQM
Trigger: CATCTGCGGCACGCAGCTGCAGAACCAGAGCGAGCT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGTCAGAGAGGGCCGTaGCGTTGGGCCCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCQRGP*RWARCR
Trigger: TCTACATCGGGCCCAACGGCACGGCCCTCTCTGACA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGTACGCACCTCGGGCTaGAGCAAGGACTCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTVRTSG*SKDSLD
Trigger: GTCTAGGGAGTCCTTGCTGCAGCCCGAGGTGCGTAC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAGCTCCAGTGGCTGCTaGACCGTCACCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSSSGC*TVTIVV
Trigger: CACCACGATGGTGACGGTGCAGCAGCCACTGGAGCT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAAACTGTGGCACGACTaGTCACCCTCACTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVKLWHD*SPSLPA
Trigger: CGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAAACTGTGGCACGACTaGTCACCCTCACTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKKLWHD*SPSLPA
Trigger: CGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGCCATTGCCTCCCCGTaGCCAAAACACGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVAIASP*PKHVWA
Trigger: AGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGCCATTGCCTCCCCGTaGCCAAAACACGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKAIASP*PKHVWA
Trigger: AGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACCAGCGAGTTGCTTCTaGTGGCCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVPASCF*WPAAPA
Trigger: AGCTGGAGCAGCTGGCCAGCAGAAGCAACTCGCTGG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATCTCGTAGCCGCTGCTaGCGCCGCTGTGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSRSRC*RRCGRT
Trigger: TGTTCTACCACAGCGGCGGCAGCAGCGGCTACGAGA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCAGAATCTTCAGCTTTaGATTGAAGCACATGGCCTC +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDQNLQL*IEAHGL
Trigger: GAGGCCATGTGCTTCAATGCAAAGCTGAAGATTCTG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTCCAGCTCCCAAACCTaGTCCAAGTCAAATTCACTG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESSSSQT*SKSNSL
Trigger: CAGTGAATTTGACTTGGAGCAGGTTTGGGAGCTGGA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAACGGTGTTTGACGTTTaGACCTTTCCTACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGTVFDV*TFPTEN
Trigger: GTTTTCTGTAGGAAAGGTGCAAACGTCAAACACCGT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCCCTGTGCTGCAGGTaGCGTCTCCTCACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPLCCR*RLLTCS
Trigger: AGAACAGGTGAGGAGACGGCACCTGCAGCACAGGGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGCGAGCCCAGAGCATaGGACTGTCCTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGEPRA*DCPAEW
Trigger: CCATTCTGCAGGACAGTCGCATGCTCTGGGCTCGCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGCGAGCCCAGAGCATaGGACTGTCCTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGEPRA*DCPAEW
Trigger: CCATTCTGCAGGACAGTCGCATGCTCTGGGCTCGCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGACAGGACACATCTCTaGATTTGCATCTTAATGCTC +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGDRTHL*ICILML
Trigger: GAGCATTAAGATGCAAATGCAGAGATGTGTCCTGTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESEGLCV*SKNGLL
Trigger: TAGTAACCCATTCTTGGAGCACACACAGAGTCCCTC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGTGCCTTTCCTCCCTaGCCAGACTCCCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISCAFPP*PDSRVV
Trigger: CACCACACGGGAGTCTGGGCAGGGAGGAAAGGCACA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAATCCAAAGAAACACTaGCCCCACCAAAATTTGAGA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHNPKKH*PHQNLR
Trigger: TCTCAAATTTTGGTGGGGGCAGTGTTTCTTTGGATT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCCTTGGGAACAACTATaGTTAGAGATTAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RDPARCSVIAILGRSLTCPWEQL*LEIKVC
Trigger: ACAAACCTTAATCTCTAAGCATAGTTGTTCCCAAGG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCTTTCCCATTTGGCTaGTTACTACAGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSFPFG*LLQKQL
Trigger: AAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTGAGTCCTCTTCCGTaGAAGCCGGTGGGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLSPLP*KPVGVD
Trigger: ATCCACGCCCACCGGCTTGCACGGAAGAGGACTCAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGTGAGGGGACAAAATaGCTTAAGATTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSEGTK*LKIVRL
Trigger: GAGTCTTACAATCTTAAGGCATTTTGTCCCCTCACT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTAGTGAGGGGACAAAATaGCTTAAGATTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSEGTK*LKIVRL
Trigger: GAGTCTTACAATCTTAAGGCATTTTGTCCCCTCACT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGTCCCGGTCGTTCCATaGCTTCCGGATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVVPVVP*LPDGVG
Trigger: CCCAACACCATCCGGAAGGCATGGAACGACCGGGAC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCACTGCCGGCTGCCTaGTCCAACGTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSLPAA*SNVSTI
Trigger: GATGGTGCTGACGTTGGAGCAGGCAGCCGGCAGTGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGAAGGCAAACATCTTTaGAGGAACCTGGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESEGKHL*RNLVAS
Trigger: AGAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACATCCTTTCCGATCATaGTGTAGGATTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGHPFRS*CRIFPV
Trigger: AACTGGGAAAATCCTACACCATGATCGGAAAGGATG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTGGACAGGTGAGCGATaGGGAAGTCAGGGTCCACCG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTWTGER*GSQGPP
Trigger: CGGTGGACCCTGACTTCCCCATCGCTCACCTGTCCA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGAAAGGAAAGCTGCTaGGCTCCTCGCTGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRKESC*APRCRR
Trigger: TCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGTCGGGGCTGGCCTTaGGCTTCTCTCTGCACACCA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCRGWP*ASLCTP
Trigger: TGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGTCGGGGCTGGCCTTaGGCTTCTCTCTGCACACCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVCRGWP*ASLCTP
Trigger: TGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGCAAGTTGTCGGGGCTaGCCTTGGGCTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKASCRG*PWASLC
Trigger: GCAGAGAGAAGCCCAAGGCCAGCCCCGACAACTTGC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGAGGGGGAGTCCCTTTaGGCCGAGCCAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKEGESL*AEPEHS
Trigger: ACTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGAGGGGGAGTCCCTTTaGGCCGAGCCAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVEGESL*AEPEHS
Trigger: ACTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTGGCCCGGTTCTTCTaGTCCAGGCTGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLARFF*SRLDFR
Trigger: CCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGACGCCTGTGCTGTTaGGGGGTTTTCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGRLCC*GVFSQG
Trigger: CCCCTGTGAGAAAACCCCCCAACAGCACAGGCGTCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCATCAGATACTGTTTaGTCGCCTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKASDTV*SPPAPS
Trigger: TGAAGGAGCTGGAGGCGACCAAACAGTATCTGATGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTCTTAATCAGTCATTCTaGGTTGTTTTGTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLNQSF*VVLCSL
Trigger: AAGCGAACACAAAACAACCCAGAATGACTGATTAAG...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKRRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCAAATATTACAATGTaGGCTGTTAGCAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSNITM*AVSRIG
Trigger: CCCTATCCTGCTAACAGCCCACATTGTAATATTTGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGGATCTTTCCCATTTaGCTGCTTACTACAGAAACA +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGIFPI*LLTTET
Trigger: TGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCACACCTTAGAGGAATaGTATGTGTTCATGTCTACA +
Preference number: 4 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPHTLEE*YVFMST
Trigger: TGTAGACATGAACACATACCATTCCTCTAAGGTGTG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGGTTTTCTGTCCTATaGCCTTTCACCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRFSVL*PFTMSG
Trigger: ACCTGACATGGTGAAAGGCCATAGGACAGAAAACCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGGTTTTCTGTCCTATaGAATATATCACGGACGGGA +
Preference number: 4 (lower is better)
Translates to: EALGHRRAEILVLWTTDKRFSVL*NISRTG
Trigger: TCCCGTCCGTGATATATTCCATAGGACAGAAAACCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTGCCAAGGGGCTGCTaGGACCTGCCCAAGTACAGA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLPRGC*DLPKYR
Trigger: TCTGTACTTGGGCAGGTCCCAGCAGCCCCTTGGCAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGGGAATGAAAGCAAATaGATCCCACAAGTAATAGCA +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLGNESK*IPQVIA
Trigger: TGCTATTACTTGTGGGATCCATTTGCTTTCATTCCC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTCTCTGTCATCAGCTaGGAGATCTGGTATGGGTAC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLSVIS*EIWYGY
Trigger: GTACCCATACCAGATCTCCCAGCTGATGACAGAGAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp AGCCAGCAGATTTGGGCATGTCTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTATGGAAAGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SQQIWACLLFAP*HRSRLLWKVQS
Trigger: GCTTTGCACTTTCCATAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCCAAATCTGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGTCCTTCACCTTGTTaGCAGCCCTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCPSPC*QPSAGR
Trigger: CCTGCCTGCTGAGGGCTGTCAACAAGGTGAAGGACA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCAAGTCAAATTCACTaGGCCACTTGTTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPSQIH*ATCWDP
Trigger: TGGATCCCAACAAGTGGCTCAGTGAATTTGACTTGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCGGCTGTGTTTGCATTaGACAAATCTGCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRLCLH*TNLQIC
Trigger: ACAAATCTGCAGATTTGTTCAATGCAAACACAGCCG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGCAGGAAAGAACAATaGGTACAGGCAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSRKEQ*VQAGLL
Trigger: AAGGAGTCCTGCCTGTACTCATTGTTCTTTCCTGCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCCGTGTGGTGGCATTaGAGAGTGTCCTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPVWWH*RVSFMG
Trigger: CCCCATGAAGGACACTCTTCAATGCCACCACACGGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGAAGATGAGCTTAAATaGCAGTATCTTCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDEDELK*QYLLPD
Trigger: ATCCGGGAGAAGATACTGTCATTTAAGCTCATCTTC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCCACTGAAGCTGGTTaGAAAGAGCGGTGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPTEAG*KERWFG
Trigger: GCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGATGATGCCCAGGTTCTaGATGGAATCATCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKMMPRF*MESSFP
Trigger: CGGAAAGGATGATTCCATGCAGAACCTGGGCATCAT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTCAGCTCCAGTGGCTaGTGCACCGTCACCATCGTG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTFSSSG*CTVTIV
Trigger: CACGATGGTGACGGTGCAGCAGCCACTGGAGCTGAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTCAGCTCCAGTGGCTaGTGCACCGTCACCATCGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKFSSSG*CTVTIV
Trigger: CACGATGGTGACGGTGCAGCAGCCACTGGAGCTGAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCCTTTGATGGGGGCTaGTTTGTTGAAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKAFDGG*FVERVI
Trigger: GATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCGAGCCAGAACACAGTaGTTGGGGGAAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISRARTQ*LGEATF
Trigger: GAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGCTCG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGTCACACACTCCAGTaGCTCCAGGTACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRHTLQ*LQVLQG
Trigger: TCCCTGGAGTACCTGGAGGCACTGGAGTGTGTGACG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGCCAGCTGTGTGGGCTaGAGTGTCCAGAGGTACACT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVASCVG*SVQRYT
Trigger: AGTGTACCTCTGGACACTGCAGCCCACACAGCTGGC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCCAGCTGTGTGGGCTaGAGTGTCCAGAGGTACACT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTASCVG*SVQRYT
Trigger: AGTGTACCTCTGGACACTGCAGCCCACACAGCTGGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRDSYGK*KARLVT
Trigger: GGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGCTCAGGGAGGTCCTaGTTCCCAGGGCAACACACT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSSGRS*FPGQHT
Trigger: AGTGTGTTGCCCTGGGAAGCAGGACCTCCCTGAGCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAGGAGGCAAGCCGAATaGCACTCCCCTCGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVRRQAE*HSPRKD
Trigger: ATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCCCGTGACTGGGACTaGTTCAGAATGGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSRDWD*FRMVSR
Trigger: CCGGCTGACCATTCTGAAGCAGTCCCAGTCACGGGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCCTCAGCACCACCGTaGAATGCGACGTGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSSAPP*NATWSD
Trigger: GTCACTCCACGTCGCATTGCACGGTGGTGCTGAGGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGATCTTTCCCATTTGGCTaGTTACTACAGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSFPFG*LLQKQL
Trigger: AAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGA...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGGGCTGCTGGGACCTaGCCAAGTACAGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGAAGT*PSTEEL
Trigger: CAACTCTTCTGTACTTGGGCAGGTCCCAGCAGCCCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGCACAAAACTAGCCTaGCAAGGGGCTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISCTKLA*QGAAGT
Trigger: GGTCCCAGCAGCCCCTTGGCAGGCTAGTTTTGTGCA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAACGTTTATATAGCTTaGAAAGGCCCATGCACAAAA +
Preference number: 4 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHNVYIA*KGPCTK
Trigger: TTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCTGGGTTTGCTGCCGTaGTTGTTGGCGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLGLLP*LLAKPV
Trigger: CACAGGCTTCGCCAACAAGCACGGCAGCAAACCCAG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTCCTGCGGGAGGCAATaGCGGCATCCAGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSCGRQ*RHPGKR
Trigger: CCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCACAGTCCTGTTGGTaGCTCCTGCGGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSQSCW*LLREAM
Trigger: CATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCATCACAGTCCTGTTaGTGGCTCCTGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSSQSC*WLLREA
Trigger: TGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGATAGGGACAAAGTCTaGGGGGCCCTCGTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISDRDKV*GALVVG
Trigger: ACCGACAACGAGGGCCCCCCAGACTTTGTCCCTATC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCTGCTTGCCTGCTCTaGCCCAAACTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSACLL*PKLSRQ
Trigger: CTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGACTCCTCTGCATCTTaGAGGCTGGGAGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKDSSAS*RLGVQG
Trigger: GCCCTGAACTCCCAGCCTCCAAGATGCAGAGGAGTC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCTGGGAAGGAGAGCTaGGTGGCTTGTACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSGKES*VACTPR
Trigger: CCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACCGTTCAGCTCCAGTaGCTGCTGCACCGTCACCAT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTVQLQ*LLHRHH
Trigger: ATGGTGACGGTGCAGCAGCCACTGGAGCTGAACGGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACATTCGAGGGGCCCGTaGCAGTCTCACACCTCATCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVHSRGP*QSHTSS
Trigger: TGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCAGAACACAGTGCTTaGGGGAAGCCACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPEHSA*GKPPSP
Trigger: AGGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACCAGAACACAGTGCTTaGGGGAAGCCACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVPEHSA*GKPPSP
Trigger: AGGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESVIIMR*ALQKLT
Trigger: TGTCAACTTCTGCAAGGCCCATCTCATGATGATCAC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTACTAGGACAAGGGTCTaGCTCATCTACCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISTRTRV*LIYRRL
Trigger: CAGGCGCCGGTAGATGAGCCAGACCCTTGTCCTAGT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGTTCAGCCAGCTGTGTaGGCTGCAGTGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKVQPAV*AAVSRG
Trigger: ACCTCTGGACACTGCAGCCCACACAGCTGGCTGAAC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTCAGCCAGCAGATTTaGGCATGTCTCCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRFSQQI*ACLLFA
Trigger: TGCAAACAGGAGACATGCCCAAATCTGCTGGCTGAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCACGCTGCGATGCCTaGCTGTTTACCCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPRCDA*LFTPAS
Trigger: AGAAGCTGGGGTAAACAGCCAGGCATCGCAGCGTGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATGTGTGCTCCAAGAATaGGTTACTAGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRCVLQE*VTSPAG
Trigger: TCCTGCTGGACTAGTAACCCATTCTTGGAGCACACA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGCAAGCCGGTGGGCGTaGATTTCCAAGCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISASRWA*ISKPIL
Trigger: GAGAATGGGCTTGGAAATCCACGCCCACCGGCTTGC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTAGTAACAACCAGGCCTaGCGGCCCATGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSNNQA*RPMSLL
Trigger: GAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGTAACAACCAGGCCTaGCGGCCCATGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSNNQA*RPMSLL
Trigger: GAGCAAGGACATGGGCCGCCAGGCCTGGTTGTTACT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGGTTTTCTGTCCTATaGAATATATCACGGACGGGA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRFSVL*NISRTG
Trigger: TCCCGTCCGTGATATATTCCATAGGACAGAAAACCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCACATCCACAGAACTaGCATTTTCTTCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPHPQN*HFLQPS
Trigger: ACTTGGCTGAAGAAAATGCCAGTTCTGTGGATGTGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAAGGGTTGGGGTCGCTaGTTTATTCTTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDKGWGR*FILLFK
Trigger: TTTGAAGAGAAGAATAAACCAGCGACCCCAACCCTT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTTGGCCTGGTGGGTTaGGGACCCGCTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLGLVG*GPALLF
Trigger: GAAAAGAAGAGCGGGTCCCCAACCCACCAGGCCAAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp ACTGTTTCTGGCACAATAAATGCACCTGGGCAGACCTaGTCTCCACTTTTCAAATGGGCCCATTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: TVSGTINAPGQT*SPLFKWAHFYR
Trigger: TCTGTAGAAATGGGCCCATTTGAAAAGTGGAGACAAGGTCTGCCCAGGTGCATTTATTGTGCCAGAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGTGAAGAACACGTGTaGGTTGCGGTGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISCEEHV*VAVVVL
Trigger: GAGGACGACCACCGCAACTCACACGTGTTCTTCACA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTGTGAAGAACACGTGTaGGTTGCGGTGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKCEEHV*VAVVVL
Trigger: GAGGACGACCACCGCAACTCACACGTGTTCTTCACA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVTWWRS*GFWWWR
Trigger: CCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGAAATATGGCTCTGGTaGATTGGTTCCAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKEIWLW*IGSSFR
Trigger: ACGAAAGCTGGAACCAATTCACCAGAGCCATATTTC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGTCTCTGAACAAGCCTaGGAAGGTCTCTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISVSEQA*EGLSAG
Trigger: CCCAGCTGAGAGACCTTCTCAGGCTTGTTCAGAGAC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTATCCAGGGTCGTGTaGGTTATGGAGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLSRVV*VMEGKL
Trigger: GAGCTTCCCCTCCATAACTCACACGACCCTGGATAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCGTCACCATCGTGGTaGTCAGGATCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPSPSW*SGSPSW
Trigger: CCAAGAAGGAGATCCTGAGCACCACGATGGTGACGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACCTTGGGCTTCTCTCTaGACACCACAGCGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKPWASL*TPQRCS
Trigger: AGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGTCCTGCTCCTGCTCTaGTCTGGTCTCAGCATTCGA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKVLLLL*SGLSIR
Trigger: TCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGAC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCAGAATCTTCAGCTTTaGATTGAAGCACATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKQNLQL*IEAHGL
Trigger: GAGGCCATGTGCTTCAATGCAAAGCTGAAGATTCTG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGGGGAAGCTCTCTCTaGCTTTGGGCAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRGSSL*LWAGAK
Trigger: CTTTGCTCCTGCCCAAAGGCAGAGAGAGCTTCCCCT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISWPARS*EVFCDC
Trigger: GCAATCACAGAACACCTCGCAGGATCTCGCAGGCCA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGGCCTGCGAGATCCTaGGAGGTGTTCTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVWPARS*EVFCDC
Trigger: GCAATCACAGAACACCTCGCAGGATCTCGCAGGCCA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCATCATAACGTAAAATaGCTGATTTCTTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLHHNVK*LISSCG
Trigger: ACCACATGAAGAAATCAGGCATTTTACGTTATGATG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACCAGGCCAGATTCCTaGCTGTCTAATTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTRPDS*LSNSPR
Trigger: GCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGAAAAGTGGGCTGTGTaGCTTTCCTCCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKEKWAV*LSSLPR
Trigger: TCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGAAAAGTGGGCTGTGTaGCTTTCCTCCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISEKWAV*LSSLPR
Trigger: TCTGGGCAGGGAGGAAAGGCACACAGCCCACTTTTC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCTTTGTTTCATTTGGTaGAGAGAAAAGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESLCFIW*REKWAV
Trigger: CACAGCCCACTTTTCTCTGCACCAAATGAAACAAAG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGTTGCAAAGAGCGGTaGTTCGGCAGCGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGCKER*FGSGRS
Trigger: ACTTCTTCCGCTGCCGAACCACCGCTCTTTGCAACC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACGTGTGAGTTGCGGTaGTCGTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTCELR*SSSSQS
Trigger: GGACTGTGATGAGGACGACCACCGCAACTCACACGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGTCTTCTGCAGGGCTaGCACGATAGGGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGLLQG*HDRDKV
Trigger: GACTTTGTCCCTATCGTGCCAGCCCTGCAGAAGACC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGTCTTCTGCAGGGCTaGCACGATAGGGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGLLQG*HDRDKV
Trigger: GACTTTGTCCCTATCGTGCCAGCCCTGCAGAAGACC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGAAGGAGAGCTGGGTaGCTTGTACTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGRRAG*LVLRGL
Trigger: AAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGAAGGAGAGCTGGGTaGCTTGTACTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGRRAG*LVLRGL
Trigger: AAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRVIIMR*ALQKLT
Trigger: TGTCAACTTCTGCAAGGCCCATCTCATGATGATCAC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGAAGGTCTCTCAGCTaGGGAAAAACCCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRRSLS*GKTHFN
Trigger: ATTAAAGTGGGTTTTTCCCCAGCTGAGAGACCTTCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGGTCGTGTGAGTTATaGAGGGGAAGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGSCEL*RGSSLC
Trigger: GCAGAGAGAGCTTCCCCTCCATAACTCACACGACCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGGTCGTGTGAGTTATaGAGGGGAAGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGSCEL*RGSSLC
Trigger: GCAGAGAGAGCTTCCCCTCCATAACTCACACGACCC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGATTGGCTTCCCTTTaGGTCCAGAAGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGLASL*VQKPPR
Trigger: CCTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGATCATGTCTGGCCACTaGGTAAGGCATCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKIMSGH*VRHPPV
Trigger: CACGGGAGGATGCCTTACCCAGTGGCCAGACATGAT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAATCATGTCTGGCCACTaGGTAAGGCATCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKIMSGH*VRHPPV
Trigger: CACGGGAGGATGCCTTACCCAGTGGCCAGACATGAT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCAGCTTTGTTTCATTTaGTGCAGAGAAAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESQLCFI*CREKWA
Trigger: AGCCCACTTTTCTCTGCACCAAATGAAACAAAGCTG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCCCAGTCTTCCATCTaGTTAAACAGTGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPQSSI*LNSGFQ
Trigger: CTGAAATCCACTGTTTAACCAGATGGAAGACTGGGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATCCATGCCTTCCGGATaGTGTTGGGGACCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKSMPSG*CWGPGV
Trigger: AACTCCAGGTCCCCAACACCATCCGGAAGGCATGGA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCTGGGAGATCTGGTATaGGTACAGGGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLGDLV*VQGDPV
Trigger: AACGGGGTCACCCTGTACCCATACCAGATCTCCCAG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp ATTTGCAAGGCACTTAATCAGTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCAATCCTACATCCACGC +
Preference number: 4 (lower is better)
Translates to: ICKALNQSFWVV*CSLSTAILHPR
Trigger: GCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAGAATGACTGATTAAGTGCCTTGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp TATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTaGACCACTCTGTACCCCAGGTTTCTATCAATCACT +
Preference number: 4 (lower is better)
Translates to: YHQHHSFYQGNP*TTLYPRFLSIT
Trigger: AGTGATTGATAGAAACCTGGGGTACAGAGTGGTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp CTTTCGCTTGTGGGTAATGAAATAGAAATGGGTTCGTaGATATTCCCCCTTGCCTCCTTGGGTTCTCTATCA +
Preference number: 4 (lower is better)
Translates to: LSLVGNEIEMGS*IFPLASLGSLS
Trigger: TGATAGAGAACCCAAGGAGGCAAGGGGGAATATCAACGAACCCATTTCTATTTCATTACCCACAAGCGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCTGCAGAATCCCACTaGAGCTGGTTGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSAESH*SWLQRA
Trigger: CGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCTGCAGAATCCCACTaGAGCTGGTTGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSAESH*SWLQRA
Trigger: CGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGAGAGACACAGCCCTaGGCCTCCTTCTCGATTTTT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRETQP*ASFSIF
Trigger: AAAAATCGAGAAGGAGGCTCAGGGCTGTGTCTCTCG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGCTCTGGCCCAAACTaGGCAGGCAGTTCTTCGAAA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKCSGPN*AGSSSK
Trigger: TTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTGAAGGCTAATTTATaGCAAACCAGGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLKANL*QTRPDS
Trigger: GGAATCTGGCCTGGTTTGTCATAAATTAGCCTTCAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTTTATCAGAAAGTCTaGGCAGCAAGCGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRFYQKV*AASVRL
Trigger: AAGTCTCACGCTTGCTGCTCAGACTTTCTGATAAAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCATGGAATAGATGTGTaGGTGTGGTATTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESHGIDV*VWYFST
Trigger: AGTACTGAAATACCACACTCACACATCTATTCCATG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCTAAGCCCTGTGCATTaGGGATTGGACCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLSPVH*GLDPNP
Trigger: GGGATTAGGGTCCAATCCTCAATGCACAGGGCTTAG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCGTACAAGGTGATCTaGTTCTTCCGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSYKVI*FFRGST
Trigger: GGTGGACCCACGGAAGAAGCAGATCACCTTGTACGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGAACACGTGTGAGTTaGGGTGGTCGTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRTRVS*GGRPHH
Trigger: GTGATGAGGACGACCACCGCAACTCACACGTGTTCT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCTCGGCAAACGTGTTaGACTTCAGGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTARQTC*TSGSPF
Trigger: AAAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGCTCGGCAAACGTGTTaGACTTCAGGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKARQTC*TSGSPF
Trigger: AAAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGAGTAGCTGCCTGCTaGTCATCATCGACAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGVAAC*SSSTGV
Trigger: AACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAAGTACCATCCTCGATaGGAAGGCTGCAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKKYHPR*EGCRDS
Trigger: AGAGTCCCTGCAGCCTTCGCATCGAGGATGGTACTT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACCCTGGATGGTAGATaGGGCTGGACTGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTLDGR*GWTEVT
Trigger: AGTGACTTCAGTCCAGCCGCATCTACCATCCAGGGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCAAGTGGGCACAACTaGATTTTTGGTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPSGHN*IFGQYK
Trigger: TTTGTATTGACCAAAAATGCAGTTGTGCCCACTTGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATAGACGGCTGTGTTTaGATTGAACAAATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESIDGCV*IEQICR
Trigger: TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAACGTTTATATAGCTTaGAAAGGCCCATGCACAAAA +
Preference number: 4 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDNVYIA*KGPCTK
Trigger: TTTTGTGCATGGGCCTTTGCAAGCTATATAAACGTT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACGGCAGCGGAAGAAGTaGAAGGCCGATGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKRQRKK*KADVSS
Trigger: AGAAGAAACATCGGCCTTCCACTTCTTCCGCTGCCG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCATCCTTTCCGATCATaGTGTAGGATTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKHPFRS*CRIFPV
Trigger: AACTGGGAAAATCCTACACCATGATCGGAAAGGATG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACTCTCGATGCAATCTaGATGGTGGACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTLDAI*MVDRVS
Trigger: GGAGACCCTGTCCACCATCCAGATTGCATCGAGAGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGGGCTATGAAACTGTaGCACGACTGCTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKWAMKL*HDCSPS
Trigger: TGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCACAATCAACCTTCTaGGTCTACCTGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPQSTF*VYLTTL
Trigger: CAGCGTGGTCAGGTAGACCCAGAAGGTTGATTGTGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAACCAGCAGCCCAATaGCAAACTCGAAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQPAAQ*QTRRIG
Trigger: GCCAATCCTTCGAGTTTGCCATTGGGCTGCTGGTTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTTGAACCTCCACCCTaGATGGTAGATGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTFEPPP*MVDAAG
Trigger: TCCAGCCGCATCTACCATCCAGGGTGGAGGTTCAAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCGATGCACGGCACGTaGATAGCATTTCCAACCGTG +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSMHGT*IAFPTV
Trigger: CACGGTTGGAAATGCTATCCACGTGCCGTGCATCGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAAGGTTTTCTGTCCTATaGAATATATCACGGACGGGA +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRFSVL*NISRTG
Trigger: TCCCGTCCGTGATATATTCCATAGGACAGAAAACCT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGAATTCACTGTTTCTaGCACAATAAATGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGIHCF*HNKCTW
Trigger: CCAGGTGCATTTATTGTGCCAGAAACAGTGAATTCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGAATTCACTGTTTCTaGCACAATAAATGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGIHCF*HNKCTW
Trigger: CCAGGTGCATTTATTGTGCCAGAAACAGTGAATTCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp GTGTTTGCATTGAACAAATCTGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGGTGGCTGGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: VFALNKSADLSA*PSIQRRWLVYK
Trigger: CTTGTAAACCAGCCACCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGCAGATTTGTTCAATGCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGGTAGATGTGCAGTGTaGAGAACACGTGTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISGRCAV*RTRVSC
Trigger: GCAACTCACACGTGTTCTTCACACTGCACATCTACC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCCTTCCACGGTGTTTaGCGTTTGCACCTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSFHGV*RLHLSY
Trigger: GTAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTCGCAGGTGGGAACTaGAAGCCCATGATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLAGGN*KPMIKQ
Trigger: TTGCTTTATCATGGGCTTTCAGTTCCCACCTGCGAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACGGGCAGAGTGTTCTaGTTCCAAATCCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTGRVF*FQIRKR
Trigger: TCTCTTCCGGATTTGGAATCAGAACACTCTGCCCGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCATGGAATAGATGTGTaGGTGTGGTATTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKHGIDV*VWYFST
Trigger: AGTACTGAAATACCACACTCACACATCTATTCCATG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTTCAACTGGTTCAGGTaGGTGGCGCAAATGTCACAG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISFNWFR*VAQMSQ
Trigger: CTGTGACATTTGCGCCACTCACCTGAACCAGTTGAA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGTCTTGTGGAAAAACTaGATCGAAGGCAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKVLWKN*IEGKHL
Trigger: AAGATGTTTGCCTTCGATGCAGTTTTTCCACAAGAC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCTGGGTGTAGACTTTaGATCTCTGGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSGCRL*ISGKES
Trigger: GCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCTTGGGAACAACTATaGTTAGAGATTAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPWEQL*LEIKVC
Trigger: ACAAACCTTAATCTCTAAGCATAGTTGTTCCCAAGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATCTTTCCCATTTGGCTaGTTACTACAGAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRSFPFG*LLQKQL
Trigger: AAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCTTGCAAAGGCCCATaGACAAAACTAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTACKGP*TKLACQ
Trigger: TTGGCAGGCTAGTTTTGTGCATGGGCCTTTGCAAGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTCCCCCTTGCCTCCTTaGGTTCTCTATCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTSPLPP*VLYHQN
Trigger: GTTTTGGTGATAGAGAACCCAAGGAGGCAAGGGGGA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTTGCAGCTCGCAGGTaGGAACTGAAAGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVFAARR*ELKAHD
Trigger: ATCATGGGCTTTCAGTTCCCACCTGCGAGCTGCAAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTCAAATATTACAATGTaGGCTGTTAGCAGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSNITM*AVSRIG
Trigger: CCCTATCCTGCTAACAGCCCACATTGTAATATTTGA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGGTTTTCTGTCCTATaGAATATATCACGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRFSVL*NISRTG
Trigger: TCCTGTCCGTGATATATTCCATAGGACAGAAAACCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGAAAGAGCTGGATTCTaGAGTATCTCGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISERAGF*SISSQG
Trigger: ACCTTGGCTCGAGATACTTCAGAATCCAGCTCTTTC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAAATCCGGAAGAGATaGAAGAGACAGCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQIRKR*KRQLPR
Trigger: ACGAGGAAGCTGTCTCTTTCATCTCTTCCGGATTTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTGCATAATAAGTAAATaGGAGAACACGAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKCIISK*ENTSNA
Trigger: AGCATTGCTCGTGTTCTCTCATTTACTTATTATGCA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATATACCACTTTCTCTTaGTGCTCTCCCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKYTTFS*CSPRRA
Trigger: TGCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATATACCACTTTCTCTTaGTGCTCTCCCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVYTTFS*CSPRRA
Trigger: TGCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAACTCGGGCCAGTCAATaGCTAGACTTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVTRASQ*LDFSFF
Trigger: GAAGAAACTGAAGTCTAGTCATTGACTGGCCCGAGT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTATGATGCCCAGGTTCTaGATGGAATCATCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISMMPRF*MESSFP
Trigger: CGGAAAGGATGATTCCATGCAGAACCTGGGCATCAT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAATGATGCCCAGGTTCTaGATGGAATCATCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVMMPRF*MESSFP
Trigger: CGGAAAGGATGATTCCATGCAGAACCTGGGCATCAT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTATCGAGGTCACCTGCTaGTCCAAACCTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISIEVTC*SKPTLE
Trigger: TTCCAAAGTAGGTTTGGAGCAGCAGGTGACCTCGAT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISDSYGK*KARLVT
Trigger: GGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGACTCTTATGGAAAGTaGAAAGCCAGACTCGTGACC +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKDSYGK*KARLVT
Trigger: GGTCACGAGTCTGGCTTTGCACTTTCCATAAGAGTC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGTTGATATTCCCCCTTaGCTCCTTGGGTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTVDIPP*LLGFSI
Trigger: GATAGAGAACCCAAGGAGGCAAGGGGGAATATCAAC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGAGGGACTCTGTGTGTaGTCCAAGAATGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVEGLCV*SKNGLL
Trigger: TAGTAACCCATTCTTGGAGCACACACAGAGTCCCTC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTCTGGCACAATAAATaGACCTGGGCAGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVFWHNK*TWADLV
Trigger: GACAAGGTCTGCCCAGGTGCATTTATTGTGCCAGAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATTTTACACCTCATATaGCACAAAAAGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESILHLI*HKKSEI
Trigger: GATCTCTGACTTTTTGTGGCATATGAGGTGTAAAAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGTAATAGCACCAATTTaGAGAAAGGGTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISVIAPI*RKGWGR
Trigger: GCGACCCCAACCCTTTCTGCAAATTGGTGCTATTAC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTAGGATTTTCCCAGTTTaGCGTGGCCGAAACAGAACA +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISRIFPV*RGRNRT
Trigger: TGTTCTGTTTCGGCCACGCCAAACTGGGAAAATCCT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGACTCTTAGATTCTaGGCTGCACTATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGTLRF*AALSSA
Trigger: TGCTGATGATAGTGCAGCCCAGAATCTAAGAGTCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCACACGTGTGGACCTTaGGAACAACTATGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTHTCGP*EQLCLE
Trigger: CTCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAGTAGCACTAGGGGTTaGATGGGAGTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSSTRG*MGVLGK
Trigger: TTTCCCTAAGACTCCCATCCAACCCCTAGTGCTACT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACACAATAAATGCACCTaGGCAGACCTTGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKHNKCT*ADLVST
Trigger: AGTGGAGACAAGGTCTGCCCAGGTGCATTTATTGTG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGACAATGTCTTTACACTaGAAAATGCCACACAGCTTA +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKTMSLH*KMPHSL
Trigger: TAAGCTGTGTGGCATTTTCCAGTGTAAAGACATTGT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGTTACCCACCAATGTTaGCAGATACTTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVVTHQC*QILSGG
Trigger: ACCTCCAGAAAGTATCTGTCAACATTGGTGGGTAAC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAAGGTTTGTATGCAATaGAGGCTTGATACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKKVCMQ*RLDTAP
Trigger: TGGGGCAGTATCAAGCCTTCATTGCATACAAACCTT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAGAATCTTCAGCTTTaGATTGAAGCACATGGCCTC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQNLQL*IEAHGL
Trigger: GAGGCCATGTGCTTCAATGCAAAGCTGAAGATTCTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAACAAGATCAAAGTTTaGAGCTCGCAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTNKIKV*SSQVGT
Trigger: AGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGATTAAGGTTTGTATaGAATGAAGGCTTGATACTG +
Preference number: 4 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRLRFV*NEGLIL
Trigger: CAGTATCAAGCCTTCATTGCATACAAACCTTAATCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGTGATCATCATGAGATaGGCCTTGCAGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKVIIMR*ALQKLT
Trigger: TGTCAACTTCTGCAAGGCCCATCTCATGATGATCAC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGTCTCTCTGTTTGAGTaGCCTCACCAGAATAACCAT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKVSLFE*PHQNNH
Trigger: ATGGTTATTCTGGTGAGGCCACTCAAACAGAGAGAC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACACACTTGTCAGACTTaGGAGATACACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVHTCQT*EIHRRK
Trigger: CTTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTGTGCATTGAGGATTaGACCCTAATCCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLCIED*TLIPIL
Trigger: GAGAATAGGGATTAGGGTCCAATCCTCAATGCACAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGGTTTTCTGTCCTATaGCCTTTCACCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKRFSVL*PFTMSG
Trigger: ACCTGACATGGTGAAAGGCCATAGGACAGAAAACCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACATCTGGTTAAACAGTaGATTTCAGACAGTAACATT +
Preference number: 4 (lower is better)
Translates to: SAVANDIDGCVCIEQICRHLVKQ*ISDSNI
Trigger: AATGTTACTGTCTGAAATCCACTGTTTAACCAGATG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACCCCAGTCTTCCATCTaGTTAAACAGTGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKPQSSI*LNSGFQ
Trigger: CTGAAATCCACTGTTTAACCAGATGGAAGACTGGGG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp TCTTGGTTTCCTTCCGCCTTTTGTTACAGCATAAAGTaGCTACAAATGGATAAAAGCAGATTTAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SWFPSAFCYSIK*LQMDKSRFRQE
Trigger: CTCCTGCCTAAATCTGCTTTTATCCATTTGTAGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAAATGAATATGAATTTTaGGGGCCACGCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVNEYEF*GPRKLW
Trigger: CCACAGTTTGCGTGGCCCTCAAAATTCATATTCATT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTGAAGGCTAATTTATaGCAAACCAGGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLKANL*QTRPDS
Trigger: GGAATCTGGCCTGGTTTGTCATAAATTAGCCTTCAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCGGCTGTGTTTGCATTaGACAAATCTGCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKRLCLH*TNLQIC
Trigger: ACAAATCTGCAGATTTGTTCAATGCAAACACAGCCG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAATACCTGGTGCAATATaGTCTGATGGGAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVIPGAI*SDGKNP
Trigger: TGGATTCTTCCCATCAGATCATATTGCACCAGGTAT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCACACATCTCTGCATTTaGATCTTAATGCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTTHLCI*ILMLPH
Trigger: ATGGGGGAGCATTAAGATGCAAATGCAGAGATGTGT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCAGATTTGTCAGCCTTaGCTTCTATCCAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISQICQP*LLSKEG
Trigger: ACCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAGATTTGTCAGCCTTaGCTTCTATCCAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQICQP*LLSKEG
Trigger: ACCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGCATTGAACAAATCTaGAGATTTGTCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISCIEQI*RFVSLA
Trigger: GGCAAGGCTGACAAATCTGCAGATTTGTTCAATGCA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAAGAAGCAGACTCTTATaGAAAGTGCAAAGCCAGACT +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKRSRLL*KVQSQT
Trigger: AGTCTGGCTTTGCACTTTCCATAAGAGTCTGCTTCT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAATTTGCAGAAAGGGTTaGGGTCGCTGGTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVICRKG*GRWFIL
Trigger: AAGAATAAACCAGCGACCCCAACCCTTTCTGCAAAT...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTGTTGTTTTCATCTTaGCTAGCACCATCTGTACAC +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLLFSS*LAPSVH
Trigger: GTGTACAGATGGTGCTAGTCAAGATGAAAACAACAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTGTTGTTTTCATCTTaGCTAGCACCATCTGTACAC +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLLFSS*LAPSVH
Trigger: GTGTACAGATGGTGCTAGTCAAGATGAAAACAACAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCAAGTGGGCACAACTaGATTTTTGGTCAATACAAA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPSGHN*IFGQYK
Trigger: TTTGTATTGACCAAAAATGCAGTTGTGCCCACTTGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGATAGACGGCTGTGTTTaGATTGAACAAATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKIDGCV*IEQICR
Trigger: TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTAT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp CATACATTACTAATCATGGAATTAGAGATCCAGAGCTaGAAGGAACCACAAAGATCATCTAGCACAATGTCT +
Preference number: 4 (lower is better)
Translates to: HTLLIMELEIQS*KEPQRSSSTMS
Trigger: AGACATTGTGCTAGATGATCTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR TCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTGCATAATAAGTAAATaGGAGAACACGAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKCIISK*ENTSNA
Trigger: AGCATTGCTCGTGTTCTCTCATTTACTTATTATGCA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCTTGGGAACAACTATaGTTAGAGATTAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPWEQL*LEIKVC
Trigger: ACAAACCTTAATCTCTAAGCATAGTTGTTCCCAAGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTTAATCAGTCATTCTaGGTTGTTTTGTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLNQSF*VVLCSL
Trigger: AAGCGAACACAAAACAACCCAGAATGACTGATTAAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGATACTTTCTGGAGGTaGAAAAAGAGGTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISDTFWR*KKRYQN
Trigger: ATTCTGATACCTCTTTTTCCACCTCCAGAAAGTATC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACAATGTCTTTACACTaGAAAATGCCACACAGCTTA +
Preference number: 4 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTMSLH*KMPHSL
Trigger: TAAGCTGTGTGGCATTTTCCAGTGTAAAGACATTGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTACAATGTCTTTACACTaGAAAATGCCACACAGCTTA +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISTMSLH*KMPHSL
Trigger: TAAGCTGTGTGGCATTTTCCAGTGTAAAGACATTGT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACATCATAACGTAAAATaGCTGATTTCTTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVHHNVK*LISSCG
Trigger: ACCACATGAAGAAATCAGGCATTTTACGTTATGATG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCATCATAACGTAAAATaGCTGATTTCTTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISHHNVK*LISSCG
Trigger: ACCACATGAAGAAATCAGGCATTTTACGTTATGATG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR GCA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCATTTTACACCTCATATaGCACAAAAAGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTILHLI*HKKSEI
Trigger: GATCTCTGACTTTTTGTGGCATATGAGGTGTAAAAT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
3UTR CAA 72 bp TTCTCATCAAATTCAAAACGAAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAACAGCTTAGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: FSSNSKRRDLSH*AAYYRNSLDFE
Trigger: TTCAAAATCTAAGCTGTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCTTCGTTTTGAATTTGATGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp TCGGGCCCGGCCCGCAGCTGCAAGCCCCGGGCGCCCGCGCCACCCTaGAGCAGCTCCGAGATGCGCCCGCTGACGGCCCGCAGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGPARSCKPRAPAPP*SSSEMRPLTARRGS
Trigger: GCTTCCCCTGCGGGCCGTCAGCGGGCGCATCTCGGAGCTGCTGCAGGGTGGCGCGGGCGCCCGGGGCTTGCAGCTGCGGGCCGGGCCCGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp CCCGGGCGCCCGCGCCACCCTGCAGCAGCTCCGAGATGCGCCCGCTaGCGGCCCGCAGGGGAAGCTTGGAGGCCAGGCCCGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PGRPRHPAAAPRCAR*RPAGEAWRPGPSSC
Trigger: ACAGGAGCTCGGGCCTGGCCTCCAAGCTTCCCCTGCGGGCCGTCAGCGGGCGCATCTCGGAGCTGCTGCAGGGTGGCGCGGGCGCCCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CCCAGGCTCCTCCCCGCGCGGGGCATGGTGCCGTCCTTGCCCGCGTaGAGCCGGGAGCTCACGGAGGACAGGCTCTCGGCCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRLLPARGMVPSLPA*SRELTEDRLSARSR
Trigger: CCTGGAGCGGGCCGAGAGCCTGTCCTCCGTGAGCTCCCGGCTGCACGCGGGCAAGGACGGCACCATGCCCCGCGCGGGGAGGAGCCTGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CGTCTGGGAGGCCCGCCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTaGTGGTGCCGCTGCCGCTGGCACTGTGCTGAGGGCTGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: RLGGPPGRRLVGSGG*WCRCRWHCAEGWPG
Trigger: ACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGGGCCTCCCAGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp TGGAGGCGGACGGGCCGCGCGCTCTGGGGCTGGCCAGGAGGAGTCTaGTCACGGCGGAGATCTTGGACTGGCCGGCCTTGGGCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WRRTGRALWGWPGGV*SRRRSWTGRPWARP
Trigger: GGGCCTCGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCGGCCCGTCCGCCTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp ACGGGGTCCCCGAGGAGCCGAGCGCTGAGCCCGCGCCCTCAGGAGTaGGCCGGCTGCCGGCGCGCGACTCCTCGTATGCTTTCCGGTACC +
Preference number: 5 (lower is better)
Translates to: TGSPRSRALSPRPQE*AGCRRATPRMLSGT
Trigger: GGTACCGGAAAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCTGAGGGCGCGGGCTCAGCGCTCGGCTCCTCGGGGACCCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 90 bp CGGCTGCTCTGGAGGCTGGGGCTCTGCACGAGTGGGGAGGCGCTGTaGTGGCTACTGCTGCCCGGGACGCTCCTGGGTGAGGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: RLLWRLGLCTSGEAL*WLLLPGTLLGEAGL
Trigger: CAGCCCGGCCTCACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp CTGCTCTGGAGGCTGGGGCTCTGCACGAGTGGGGAGGCGCTGTGCTaGCTACTGCTGCCCGGGACGCTCCTGGGTGAGGCCGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLWRLGLCTSGEALC*LLLPGTLLGEAGLG
Trigger: CCCCAGCCCGGCCTCACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp CTGGGAGGCCCGCCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTGCTaGTGCCGCTGCCGCTGGCACTGTGCTGAGGGCTGGCCCGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGGPPGRRLVGSGGC*CRCRWHCAEGWPGS
Trigger: AGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGGGCCTCCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GGAGGCCCGCCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTGCTGGTaGCGCTGCCGCTGGCACTGTGCTGAGGGCTGGCCCGGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GGPPGRRLVGSGGCW*RCRWHCAEGWPGSS
Trigger: AGAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGGGCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CCGAGGAGCCGAGCGCTGAGCCCGCGCCCTCAGGAGTGGGCCGGCTaGCGGCGCGCGACTCCTCGTATGCTTTCCGGTACCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: PRSRALSPRPQEWAG*RRATPRMLSGTSFP
Trigger: CGGAAAGCTGGTACCGGAAAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCTGAGGGCGCGGGCTCAGCGCTCGGCTCCTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 90 bp CGCGCCCTCAGGAGTGGGCCGGCTGCCGGCGCGCGACTCCTCGTATaGTTTCCGGTACCAGCTTTCCGGGGAGAAGGGCGCTGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: RALRSGPAAGARLLV*FPVPAFRGEGRCGL
Trigger: AAGCCCGCAGCGCCCTTCTCCCCGGAAAGCTGGTACCGGAAAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCTGAGGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 90 bp GGAAGGCGGCTGGTTGGTTCAGGGGGCTGCTGGTGCCGCTGCCGCTaGCACTGTGCTGAGGGCTGGCCCGGTTCTTCTGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GRRLVGSGGCWCRCR*HCAEGWPGSSGPGW
Trigger: CCAGCCTGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp CTTGCTGCTGCTGCTGGCGTCCTTCGTCTTGCCGCTAGGCTCGTCTaGGAGGCCCGCCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LAAAAGVLRLAARLV*EARREGGWLVQGAA
Trigger: AGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGGGCCTCCCAGACGAGCCTAGCGGCAAGACGAAGGACGCCAGCAGCAGCAGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp CGCTGGCACTGTGCTGAGGGCTGGCCCGGTTCTTCTGGTCCAGGCTaGACTTTCGGACAGGGGGCAGAGGGGGAGTCCCTTTGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RWHCAEGWPGSSGPG*TFGQGAEGESLWAE
Trigger: CTCGGCCCAAAGGGACTCCCCCTCTGCCCCCTGTCCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CCGCTGCTGCTGCTGAGCCTGTCTCCCGGACTGGGCTTTCCGTCCTaGTCCTGCTCTGCTCTGGTCTCAGCATTCGAGGGGCCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: PLLLLSLSPGLGFPS*SCSALVSAFEGPVA
Trigger: TGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGCTCAGCAGCAGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp TTGCCTTCCACGAAGCCGCAGGAGTTGAGGCTCTCCCGGCTGCTCTaGAGGCTGGGGCTCTGCACGAGTGGGGAGGCGCTGTGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LPSTKPQELRLSRLL*RLGLCTSGEALCWL
Trigger: TAGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCCAGCCTCCAGAGCAGCCGGGAGAGCCTCAACTCCTGCGGCTTCGTGGAAGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp GTGCAAAGAAGGAGGCGGCCACCGATGTGCCTGTGGAAGTCTCGCTaGCCACGCAGGAGCCCTGCGAGGCTGGGACACTGCAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VQRRRRPPMCLWKSR*PRRSPARLGHCRRK
Trigger: CTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCTTCTTTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp TCTGGGCAGCTCGTGCAAAGAAGGAGGCGGCCACCGATGTGCCTGTaGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGGCTGGGACAC +
Preference number: 5 (lower is better)
Translates to: SGQLVQRRRRPPMCL*KSRWPRRSPARLGH
Trigger: GTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCTTCTTTGCACGAGCTGCCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp AGGACAGGCTCTCGGCCCGCTCCAGGGAGAGGCATTCGTAGTGGCTaGCTGTCGCCCTGCCCAGCGAGTTGCTTCTGCTGGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RTGSRPAPGRGIRSG*LSPCPASCFCWPAA
Trigger: AGCAGCTGGCCAGCAGAAGCAACTCGCTGGGCAGGGCGACAGTCAGCCACTACGAATGCCTCTCCCTGGAGCGGGCCGAGAGCCTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp TCCCCCACGAGGAAAGCGAGGGATACAATCAGGGCTCGCGGCCGCTaGCGGGAAGGTGGGAGAGCCGAGCCGAGTCAGCTGTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: SPTRKARDTIRARGR*REGGRAEPSQLWEL
Trigger: AAGTTCCCACAGCTGACTCGGCTCGGCTCTCCCACCTTCCCGGCAGCGGCCGCGAGCCCTGATTGTATCCCTCGCTTTCCTCGTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 90 bp GGACTCCCTAGACGCCACGCCGGAATCCTTGCTCGAGGGAGGCAGTaGGGCGGGAGACGGCAGGACCCCCTTCTGGGTGTAGACTTTGCA +
Preference number: 5 (lower is better)
Translates to: GLPRRHAGILARGRQ*GGRRQDPLLGVDFA
Trigger: TGCAAAGTCTACACCCAGAAGGGGGTCCTGCCGTCTCCCGCCCCACTGCCTCCCTCGAGCAAGGATTCCGGCGTGGCGTCTAGGGAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCCCTCCAGGGTAGCCTaGGAGGGCGGGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRPSRVA*EGGVPE
Trigger: CTCGGGCACCCCGCCCTCCAAGGCTACCCTGGAGGG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCCTCCAGGGTAGCCTaGGAGGGCGGGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPSRVA*EGGVPE
Trigger: CTCGGGCACCCCGCCCTCCAAGGCTACCCTGGAGGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGGCATGGTGCCGTCCTaGCCCGCGTGCAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCGMVPS*PACSRE
Trigger: CTCCCGGCTGCACGCGGGCAAGGACGGCACCATGCC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp CCTGCCGGCTGGCCTTCTGAAAGGCCCTGGGAAGGCTGCTGGACTTaGCGCTTTTGTTGGGATGCACGGGGCTCTGGGTGGCCAAACCGG +
Preference number: 5 (lower is better)
Translates to: PAGWPSERPWEGCWT*RFCWDARGSGWPNR
Trigger: CCGGTTTGGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCCCAGGGCCTTTCAGAAGGCCAGCCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp GCCTCCGTCTCTGAGAACCTGGATTGGAGCGTTTCTTCGGGGTCTTaGGGCTCCGGCACCTGCCGCCCACGGAGCTGCTGTTCTCGCTCG +
Preference number: 5 (lower is better)
Translates to: ASVSENLDWSVSSGS*GSGTCRPRSCCSRS
Trigger: CGAGCGAGAACAGCAGCTCCGTGGGCGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAACGCTCCAATCCAGGTTCTCAGAGACGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GCTGAGCCTGTCTCCCGGACTGGGCTTTCCGTCCTGCTCCTGCTCTaGTCTGGTCTCAGCATTCGAGGGGCCCGTGGCAGTCTCACACCT +
Preference number: 5 (lower is better)
Translates to: AEPVSRTGLSVLLLL*SGLSIRGARGSLTP
Trigger: AGGTGTGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CTGCTGCTGAGCCTGTCTCCCGGACTGGGCTTTCCGTCCTGCTCCTaGTCTGCTCTGGTCTCAGCATTCGAGGGGCCCGTGGCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: LLLSLSPGLGFPSCS*SALVSAFEGPVAVS
Trigger: TGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGCTCAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GACGCTACATCCAGAAGGTCCTCCAACCCAGAAGCGTCCCCCGGCTaGAGGGGGCTGGCTCTCAGCCCTCAGGGCAAGGTTTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: DATSRRSSNPEASPG*RGLALSPQGKVSSA
Trigger: CGCTGAAGAAACCTTGCCCTGAGGGCTGAGAGCCAGCCCCCTGCAGCCGGGGGACGCTTCTGGGTTGGAGGACCTTCTGGATGTAGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 90 bp GGTCGTCCTCATCACAGTCCTGTTGGTGGCTCCTGCGGGAGGCAATaGCGGCATCCAGGAAAAAGGCAGCCTTCTCTGCGGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GRPHHSPVGGSCGRQ*RHPGKRQPSLRWGP
Trigger: GGGCCCCCACCGCAGAGAAGGCTGCCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAGGACGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp GGGTCTCCGCGTAGCTCCCGACCGCGGCCGAGATGTGCGCGATCATaGTGGTACGGCAGTTCATGTTCCCCAGAGACTCCCGCAGCAACA +
Preference number: 5 (lower is better)
Translates to: GSPRSSRPRPRCARS*WYGSSCSPETPAAT
Trigger: TGTTGCTGCGGGAGTCTCTGGGGAACATGAACTGCCGTACCACCATGATCGCGCACATCTCGGCCGCGGTCGGGAGCTACGCGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp GGGCGGGTGCCGCGGCGGGCACAGGTGAGTGACTCCTCTGCATCTTaGAGGCTGGGAGTTCAGGGCCTTCTCTGTTGGTCAGCTGACCTT +
Preference number: 5 (lower is better)
Translates to: GRVPRRAQVSDSSAS*RLGVQGLLCWSADL
Trigger: AAGGTCAGCTGACCAACAGAGAAGGCCCTGAACTCCCAGCCTCCAAGATGCAGAGGAGTCACTCACCTGTGCCCGCCGCGGCACCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp TTAACTTCTGGGCAGCTCGTGCAAAGAAGGAGGCGGCCACCGATGTaGCTGTGGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LTSGQLVQRRRRPPM*LWKSRWPRRSPARL
Trigger: CAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCTTCTTTGCACGAGCTGCCCAGAAGTTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp GCCTGTCTCCCGGACTGGGCTTTCCGTCCTGCTCCTGCTCTGCTCTaGTCTCAGCATTCGAGGGGCCCGTGGCAGTCTCACACCTCATCA +
Preference number: 5 (lower is better)
Translates to: ACLPDWAFRPAPALL*SQHSRGPWQSHTSS
Trigger: TGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp GGAAGGCTGCTGGACTTGACGCTTTTGTTGGGATGCACGGGGCTCTaGGTGGCCAAACCGGGCAGGGCCATCTCACACCCATCCACGACC +
Preference number: 5 (lower is better)
Translates to: GRLLDLTLLLGCTGL*VAKPGRAISHPSTT
Trigger: GGTCGTGGATGGGTGTGAGATGGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp GAAAGCGAGGGATACAATCAGGGCTCGCGGCCGCTGCCGGGAAGGTaGGAGAGCCGAGCCGAGTCAGCTGTGGGAACTTGTCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: ESEGYNQGSRPLPGR*ESRAESAVGTCLLH
Trigger: GTGAAGGAGACAAGTTCCCACAGCTGACTCGGCTCGGCTCTCCCACCTTCCCGGCAGCGGCCGCGAGCCCTGATTGTATCCCTCGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 90 bp TGTGCCTGTGGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGGCTaGGACACTGCAGGCGGAAGGCTTGTCTGCATTGTAGCGGTTCAG +
Preference number: 5 (lower is better)
Translates to: CACGSLAGHAGALRG*DTAGGRLVCIVAVQ
Trigger: CTGAACCGCTACAATGCAGACAAGCCTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTCACGGCGGAGATCTaGGACTGGCCGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLTAEI*DWPALG
Trigger: GCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp CCTTGGGCTTCTCTCTGCACACCACAGCGGTGTTCTGGAGGCTGCTaGCAAACTCCGAGGCCACAGGTTCTGCCATTGCCTCCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: PWASLCTPQRCSGGC*QTPRPQVLPLPPRA
Trigger: GGCACGGGGAGGCAATGGCAGAACCTGTGGCCTCGGAGTTTGTCAGCAGCCTCCAGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 90 bp CAGAGAGTGGGCTTGCCCCCGCTGCTTGGCTTAACCGGGGGCCTCTaGTTGCCTGCTCTGGCCCAAACTGAGCAGGCAGTTCTTCGAAAG +
Preference number: 5 (lower is better)
Translates to: QRVGLPPLLGLTGGL*LPALAQTEQAVLRK
Trigger: CTTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GCAGTGGGGCGGGAGACGGCAGGACCCCCTTCTGGGTGTAGACTTTaGATCTCTGGGAAGGAGAGCTGGGTGGCTTGTACTCCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: AVGRETAGPPSGCRL*ISGKESWVACTPRS
Trigger: AGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGAAGGGGGTCCTGCCGTCTCCCGCCCCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp TCCCCGTGCCCAAAACACGTCTGGGCTATGAAACTGTGGCACGACTaGTCACCCTCACTGCCCGCGCTCATCTCGCTCAGCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPCPKHVWAMKLWHD*SPSLPALISLSQEL
Trigger: CAGCTCCTGGCTGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 90 bp TGGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGGCTGGGACACTaGAGGCGGAAGGCTTGTCTGCATTGTAGCGGTTCAGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: WKSRWPRRSPARLGH*RRKACLHCSGSALL
Trigger: AAGCAGTGCTGAACCGCTACAATGCAGACAAGCCTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp TCCCGCGGGTGTGGAGCCGCACCCTTGGTAGTGACAAGGTCTAGATaGTTCTCTGCCCGGGGAATGGCTCTGGCACTGATCCAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SRGCGAAPLVVTRSR*FSARGMALALIQRP
Trigger: TGGCCTCTGGATCAGTGCCAGAGCCATTCCCCGGGCAGAGAAGCATCTAGACCTTGTCACTACCAAGGGTGCGGCTCCACACCCGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CCA 90 bp GCCATTGCCTCCCCGTGCCCAAAACACGTCTGGGCTATGAAACTGTaGCACGACTGCTCACCCTCACTGCCCGCGCTCATCTCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: AIASPCPKHVWAMKL*HDCSPSLPALISLS
Trigger: GCTGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CCA 90 bp TCGGGGCTGGCCTTGGGCTTCTCTCTGCACACCACAGCGGTGTTCTaGAGGCTGCTGACAAACTCCGAGGCCACAGGTTCTGCCATTGCC +
Preference number: 5 (lower is better)
Translates to: SGLALGFSLHTTAVF*RLLTNSEATGSAIA
Trigger: GGCAATGGCAGAACCTGTGGCCTCGGAGTTTGTCAGCAGCCTCCAGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCGGGAAGGCGGCTGGTaGGTTCAGGGGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAREGGW*VQGAAG
Trigger: ACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCGGGAAGGCGGCTGGTaGGTTCAGGGGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGREGGW*VQGAAG
Trigger: ACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTGGCGTCCTTCGTCTaGCCGCTAGGCTCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLASFV*PLGSSG
Trigger: CCCAGACGAGCCTAGCGGCAAGACGAAGGACGCCAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp GCTTGGCTTAACCGGGGGCCTCTGCTTGCCTGCTCTGGCCCAAACTaGGCAGGCAGTTCTTCGAAAGGAAAGCTGCTGGGCTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: AWLNRGPLLACSGPN*AGSSSKGKLLGSSL
Trigger: CAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp AAGCTGCTGGGCTCCTCGCTGCCGTCGATGCAGTCCAGCCTCTCCTaGAGCTCGGCAAACGTGTTGCACTTCAGGCAGTCCCTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: KLLGSSLPSMQSSLS*SSANVLHFRQSLSD
Trigger: GTCAGAAAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGCTGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp CCTGCTCTGGCCCAAACTGAGCAGGCAGTTCTTCGAAAGGAAAGCTaGTGGGCTCCTCGCTGCCGTCGATGCAGTCCAGCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PALAQTEQAVLRKES*WAPRCRRCSPASPA
Trigger: TGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp CCCCTTCTGGGTGTAGACTTTGCATCTCTGGGAAGGAGAGCTGGGTaGCTTGTACTCCGAGGTCTTGGACAGGCTGGCGATGCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: PLLGVDFASLGRRAG*LVLRGLGQAGDAQP
Trigger: CGGCTGGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGCTCATCACAGTCCTGTaGGTGGCTCCTGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLITVL*VAPAGG
Trigger: GCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAG...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTTGTCGGTGAGCTCCTaGTCAGAGAGGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLSVSS*SERAVP
Trigger: CGGCACGGCCCTCTCTGACAAGGAGCTCACCGACAA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGACGACCCTCCTGAAGTaGTCAGTGACCGGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRTTLLK*SVTGEA
Trigger: GGCCTCCCCGGTCACTGACAACTTCAGGAGGGTCGT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGCATGGTGCCGTCCTaGCCCGCGTGCAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGMVPS*PACSRE
Trigger: CTCCCGGCTGCACGCGGGCAAGGACGGCACCATGCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGCATGGTGCCGTCCTaGCCCGCGTGCAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGMVPS*PACSRE
Trigger: CTCCCGGCTGCACGCGGGCAAGGACGGCACCATGCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTTGGACTGGCCGGCCTaGGGCGAGGCCCCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLDWPA*GEAPEL
Trigger: CAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCAA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGCCTGCGGCAGGGACTaGGTGGAGAAGCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCACGRD*VEKLRV
Trigger: AACCCTCAGCTTCTCCACCAAGTCCCTGCCGCAGGC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GAACACGCAGCCATCTGCCCCGTTGACCACAGACTGGATCACCTCTaGCACGGTGCCTGCACACACTTCAGCCTGAGAAGCGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: EHAAICPVDHRLDHL*HGACTHFSLRSVLW
Trigger: CCACAAGACGCTTCTCAGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GGATTTTCCCAGTTTGGCGTGGCCGAAACAGAACACGCAGCCATCTaGCCCGTTGACCACAGACTGGATCACCTCTGCCACGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: GFSQFGVAETEHAAI*PVDHRLDHLCHGAC
Trigger: GCAGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTCTGTTTCGGCCACGCCAAACTGGGAAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GCAGAAGTTGACACGGCTCTCCAGGCGCTCCGTCACACACTCCAGTaGCTCCAGGTACTCCAGGGAATCCAGCTCCCAAACCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: AEVDTALQALRHTLQ*LQVLQGIQLPNLLQ
Trigger: TTGGAGCAGGTTTGGGAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGTGTGTGACGGAGCGCCTGGAGAGCCGTGTCAACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp GGACCCCCTTCTGGGTGTAGACTTTGCATCTCTGGGAAGGAGAGCTaGGTGGCTTGTACTCCGAGGTCTTGGACAGGCTGGCGATGCCCA +
Preference number: 5 (lower is better)
Translates to: GPPSGCRLCISGKES*VACTPRSWTGWRCP
Trigger: TGGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGAAGGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp CGTCCTGCTCCTGCTCTGCTCTGGTCTCAGCATTCGAGGGGCCCGTaGCAGTCTCACACCTCATCATCCCTTCTTCATTGGGATGAGCCG +
Preference number: 5 (lower is better)
Translates to: RPAPALLWSQHSRGP*QSHTSSSLLHWDEP
Trigger: CGGCTCATCCCAATGAAGAAGGGATGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp CTGGTGAGCCTGGATGGCCACCGAATTGAGGATGTTCCCATTGCTTaGACTGGTGGCCATCTGGAGGCTGACCTTGGCCTGGTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LVSLDGHRIEDVPIA*TGGHLEADLGLVGW
Trigger: CCAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCCAAGCAATGGGAACATCCTCAATTCGGTGGCCATCCAGGCTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACTCAGAGAGTGGGCTaGCCCCCGCTGCTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTQRVG*PPLLGL
Trigger: TAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTGAGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTTGTACTCCGAGGTCTaGGACAGGCTGGCGATGCCC +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRLYSEV*DRLAMP
Trigger: GGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACAA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTAGAGGGGGAGTCCCTTaGGGCCGAGCCAGAACACAG +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGRGGVP*GRARTQ
Trigger: CTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTCT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGCCAGCTGCTCCAGCTaGGCACTGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCASCSS*ALKSLL
Trigger: CAGCAAGCTCTTCAGTGCCAAGCTGGAGCAGCTGGC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGACGCCCGCTCCAGACTaGCCACCAACCTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRTPAPD*PPTFIL
Trigger: GAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTCAGGGCCTGCCTCTaGAGCTCCACCAGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLRACL*SSTRRA
Trigger: CGCCCGCCTGGTGGAGCTCAAGAGGCAGGCCCTGAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCAGTCCCTTTCTGACTaGCCGGCTGCAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGQSLSD*PAAASP
Trigger: AGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACTG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGACTCAGAGAGTGGGCTaGCCCCCGCTGCTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRTQRVG*PPLLGL
Trigger: TAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTGAGT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCACGAAGCCGCAGGAGTaGAGGCTCTCCCGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAATKPQE*RLSRLL
Trigger: GAGCAGCCGGGAGAGCCTCAACTCCTGCGGCTTCGT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCCACGCCGGAATCCTaGCTCGAGGGAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHATPES*LEGGSG
Trigger: CCCACTGCCTCCCTCGAGCAAGGATTCCGGCGTGGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCGGGAAGGCGGCTGGTaGGTTCAGGGGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPREGGW*VQGAAG
Trigger: ACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCTCACGGCGGAGATCTaGGACTGGCCGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLTAEI*DWPALG
Trigger: GCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCGTTTCTTCGGGGTCTaGAGGCTCCGGCACCTGCCG +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRFFGV*RLRHLP
Trigger: CGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAACG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTCCTTGGCCTGGTGGGTaGGGGACCCGCTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGPWPGG*GTRSSF
Trigger: AAAAGAAGAGCGGGTCCCCAACCCACCAGGCCAAGG...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CTGCTGACAAACTCCGAGGCCACAGGTTCTGCCATTGCCTCCCCGTaGCCAAAACACGTCTGGGCTATGAAACTGTGGCACGACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLTNSEATGSAIASP*PKHVWAMKLWHDCS
Trigger: TGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGGCCTCGGAGTTTGTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 90 bp GTTCTGGAGGCTGCTGACAAACTCCGAGGCCACAGGTTCTGCCATTaGCTCCCCGTGCCCAAAACACGTCTGGGCTATGAAACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VLEAADKLRGHRFCH*LPVPKTRLGYETVA
Trigger: TGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGGCCTCGGAGTTTGTCAGCAGCCTCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 90 bp CAGGTGAGTGGCGCAAATGTCACAGCGGTTGTCCCGGTCGTTCCATaGCTTCCGGATGGTGTTGGGGACCTGGAGTTTGTCGTGAATCAC +
Preference number: 5 (lower is better)
Translates to: QVSGANVTAVVPVVP*LPDGVGDLEFVVNH
Trigger: GTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACCGCTGTGACATTTGCGCCACTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CCA 90 bp AAGAACACGTGTGAGTTGCGGTGGTCGTCCTCATCACAGTCCTGTTaGTGGCTCCTGCGGGAGGCAATGGCGGCATCCAGGAAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KNTCELRWSSSSQSC*WLLREAMAASRKKA
Trigger: TGCCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAGGACGACCACCGCAACTCACACGTGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp CTCTTCCAGCCGCACGTCCTCTTGTCACGGCCACATCCACAGAACTaGCATTTTCTTCAGCCAAGTCAGTCCGTGCTCCCCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: LFQPHVLLSRPHPQN*HFLQPSQSVLPHEE
Trigger: TTCCTCGTGGGGGAGCACGGACTGACTTGGCTGAAGAAAATGCCAGTTCTGTGGATGTGGCCGTGACAAGAGGACGTGCGGCTGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 90 bp TGTCACAGCGGTTGTCCCGGTCGTTCCATGCCTTCCGGATGGTGTTaGGGACCTGGAGTTTGTCGTGAATCACAGCCGAGAAAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: CHSGCPGRSMPSGWC*GPGVCRESQPRKQG
Trigger: ACCCTGCTTTCTCGGCTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACCGCTGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGTGTCCTTCACCTTGTaGACAGCCCTCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAVSFTL*TALSRQ
Trigger: CTGCCTGCTGAGGGCTGTCAACAAGGTGAAGGACAC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGTGTCCTTCACCTTGTaGACAGCCCTCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRVSFTL*TALSRQ
Trigger: CTGCCTGCTGAGGGCTGTCAACAAGGTGAAGGACAC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTACCGGGGGCCTCTGCTaGCCTGCTCTGGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLTGGLC*PALAQT
Trigger: AGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCCACGCCGGAATCCTaGCTCGAGGGAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKATPES*LEGGSG
Trigger: CCCACTGCCTCCCTCGAGCAAGGATTCCGGCGTGGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGGGGCCTCCGGCTCTaGGATGTTCCGGGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGGLRL*DVPGAH
Trigger: ATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCCAGAACACAGTGCTaGGGGGAAGCCACCTTCCCC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPARTQC*GEATFP
Trigger: GGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGCCAGAACACAGTGCTaGGGGGAAGCCACCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCARTQC*GEATFP
Trigger: GGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGCCAGAACACAGTGCTaGGGGGAAGCCACCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAARTQC*GEATFP
Trigger: GGGGAAGGTGGCTTCCCCCAAGCACTGTGTTCTGGC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAAGCACATGGCCTCCTaGCTGGCACCCCCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPKHMAS*LAPPRR
Trigger: GCGACGAGGGGGTGCCAGCAAGGAGGCCATGTGCTT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTGGGCCTTGCAGAAGTaGACACGGCTCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAWALQK*TRLSRR
Trigger: GCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCCA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTGGGCCTTGCAGAAGTaGACACGGCTCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPWALQK*TRLSRR
Trigger: GCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCCA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGTCAGCTGTGGGAACTaGTCTCCTTCACCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRVSCGN*SPSPSL
Trigger: CAAGCTCGGTGAAGGAGACAAGTTCCCACAGCTGAC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCAGCCGCACGTCCTCTaGTCACGGCCACATCCACAG +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAQPHVL*SRPHPQ
Trigger: CTGTGGATGTGGCCGTGACAAGAGGACGTGCGGCTG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAAGGGCGCTGCGGGCTaGGTGGGCGAGCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHKGAAG*VGEQTS
Trigger: TGAAGTCTGCTCGCCCACCAAGCCCGCAGCGCCCTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGACCAGGGTGGGGATGTaGGAGAGCGGTGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKTRVGM*ESGGGE
Trigger: CTCCCCGCCACCGCTCTCCAACATCCCCACCCTGGT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATCTGGAGGCTGACCTaGGCCTGGTGGGTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCIWRLT*AWWVGD
Trigger: GTCCCCAACCCACCAGGCCAAGGTCAGCCTCCAGAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp CTGCACCGTCACCATCGTGGTGCTCAGGATCTCCTTCTTGGACTCTaGAGGAGTAGCTGCCTGCTGCTCATCATCGACAGGAGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LHRHHRGAQDLLLGL*RSSCLLLIIDRSFR
Trigger: CCGGAAACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCACCACGATGGTGACGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GTGCTCAGGATCTCCTTCTTGGACTCTGAAGGAGTAGCTGCCTGCTaGTCATCATCGACAGGAGTTTCCGGGAACCCTTCGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VLRISFLDSEGVAAC*SSSTGVSGNPSLPA
Trigger: TGCTGGGAGCGAAGGGTTCCCGGAAACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GTGGTGCTCAGGATCTCCTTCTTGGACTCTGAAGGAGTAGCTGCCTaGTGCTCATCATCGACAGGAGTTTCCGGGAACCCTTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: VVLRISFLDSEGVAA*CSSSTGVSGNPSLP
Trigger: TGGGAGCGAAGGGTTCCCGGAAACTCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp TCTTCTTTTTCTTCATCCTCAAGACTCTCGATGCAATCTGGATGGTaGACAGGGTCTCCGCGTAGCTCCCGACCGCGGCCGAGATGTGCG +
Preference number: 5 (lower is better)
Translates to: SSFSSSSRLSMQSGW*TGSPRSSRPRPRCA
Trigger: CGCACATCTCGGCCGCGGTCGGGAGCTACGCGGAGACCCTGTCCACCATCCAGATTGCATCGAGAGTCTTGAGGATGAAGAAAAAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp TTCATCAGCCACTCGTACTTCGCGCGGACCTCGGCGATCCTCTGCTaGCGGTGTTCCAGAATCTTCAGCTTTGCATTGAAGCACATGGCC +
Preference number: 5 (lower is better)
Translates to: FISHSYFARTSAILC*RCSRIFSFALKHMA
Trigger: GGCCATGTGCTTCAATGCAAAGCTGAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGTCCGCGCGAAGTACGAGTGGCTGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp CGCAAATGTCACAGCGGTTGTCCCGGTCGTTCCATGCCTTCCGGATaGTGTTGGGGACCTGGAGTTTGTCGTGAATCACAGCCGAGAAAG +
Preference number: 5 (lower is better)
Translates to: RKCHSGCPGRSMPSG*CWGPGVCRESQPRK
Trigger: CTTTCTCGGCTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACCGCTGTGACATTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCCAGCCATCTGCCCCGTaGACCACAGACTGGATCACC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCQPSAP*TTDWIT
Trigger: GGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTG...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTACTCAGAGAGTGGGCTaGCCCCCGCTGCTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPTQRVG*PPLLGL
Trigger: TAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTGAGT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTGTCGGGGCTGGCCTaGGGCTTCTCTCTGCACACC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLSGLA*GFSLHT
Trigger: GGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGACTTGACGCTTTTGTaGGGATGCACGGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFDLTLL*GCTGLW
Trigger: CCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCCCTCCAGGGTAGCCTaGGAGGGCGGGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKPSRVA*EGGVPE
Trigger: CTCGGGCACCCCGCCCTCCAAGGCTACCCTGGAGGG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTGGACTGGCCGGCCTaGGGCGAGGCCCCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLDWPA*GEAPEL
Trigger: CAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTACTTACACAAGTGCTTaGAGGCCAGAGGCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGTYTSA*RPEASP
Trigger: TGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTTCCACCTCACATATTaGGAGCAGGGGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRFHLTY*EQGVRR
Trigger: CCTCCTCACCCCCTGCTCCAAATATGTGAGGTGGAA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGTATGCAATGAAGGCTaGATACTGCCCCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCVCNEG*ILPQAA
Trigger: TGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATAC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTCCACCAGGCGGGCGTaGCAGTTCTCGCACCAGACG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSTRRA*QFSHQT
Trigger: CGTCTGGTGCGAGAACTGCAACGCCCGCCTGGTGGA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCAAGGCTGCTGGGTTaGCTGCCGTGCTTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPRLLG*LPCLLA
Trigger: CGCCAACAAGCACGGCAGCAAACCCAGCAGCCTTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCCAAGGCTGCTGGGTTaGCTGCCGTGCTTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPPRLLG*LPCLLA
Trigger: CGCCAACAAGCACGGCAGCAAACCCAGCAGCCTTGG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCCTTGGCCTGGTGGGTaGGGGACCCGCTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAPWPGG*GTRSSF
Trigger: AAAAGAAGAGCGGGTCCCCAACCCACCAGGCCAAGG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp TCCTTCATCAGCCACTCGTACTTCGCGCGGACCTCGGCGATCCTCTaGTGGCGGTGTTCCAGAATCTTCAGCTTTGCATTGAAGCACATG +
Preference number: 5 (lower is better)
Translates to: SFISHSYFARTSAIL*WRCSRIFSFALKHM
Trigger: CATGTGCTTCAATGCAAAGCTGAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGTCCGCGCGAAGTACGAGTGGCTGATGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 90 bp TCGTCTTCTTTTTCTTCATCCTCAAGACTCTCGATGCAATCTGGATaGTGGACAGGGTCTCCGCGTAGCTCCCGACCGCGGCCGAGATGT +
Preference number: 5 (lower is better)
Translates to: SSSFSSSSRLSMQSG*WTGSPRSSRPRPRC
Trigger: ACATCTCGGCCGCGGTCGGGAGCTACGCGGAGACCCTGTCCACCATCCAGATTGCATCGAGAGTCTTGAGGATGAAGAAAAAGAAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAGCATGACTTTCACCTaGCCCAGCCCCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSMTFT*PSPGVS
Trigger: GGACACCCCGGGGCTGGGCAAGGTGAAAGTCATGCT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCAGCCATCTGCCCCGTaGACCACAGACTGGATCACC +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHQPSAP*TTDWIT
Trigger: GGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGCGCCGGTCTTTTCCTaGCGTTCGTTTATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAAPVFS*RSFMSL
Trigger: CAAGCTCATAAACGAACGCAAGGAAAAGACCGGCGC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTCATCACAGTCCTGTaGGTGGCTCCTGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLITVL*VAPAGG
Trigger: GCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCCACAGGTTCTGCCATaGCCTCCCCGTGCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLPQVLP*PPRAQN
Trigger: GTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCACAGGTTCTGCCATaGCCTCCCCGTGCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPQVLP*PPRAQN
Trigger: GTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGACAGGATGAGCAAGTaGTCGGGGCTGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGDRMSK*SGLALG
Trigger: GCCCAAGGCCAGCCCCGACAACTTGCTCATCCTGTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAGAGGGGGAGTCCCTTaGGGCCGAGCCAGAACACAG +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGRGGVP*GRARTQ
Trigger: CTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTCT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCCAGCTGCTCCAGCTaGGCACTGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHASCSS*ALKSLL
Trigger: CAGCAAGCTCTTCAGTGCCAAGCTGGAGCAGCTGGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCGTTTCTTCGGGGTCTaGAGGCTCCGGCACCTGCCG +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDRFFGV*RLRHLP
Trigger: CGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAACG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTATCATGAGATGGGCCTaGCAGAAGTTGACACGGCTC +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGIMRWA*QKLTRL
Trigger: GAGCCGTGTCAACTTCTGCAAGGCCCATCTCATGAT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGGTTCAGCCAGCAGATTaGGGCATGTCTCCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRVQPAD*GMSPVC
Trigger: GCAAACAGGAGACATGCCCAAATCTGCTGGCTGAAC...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCCCAGGGCAACACACTaGTCAGACTTGGGAGATACA +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRPRATH*SDLGDT
Trigger: TGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCTGTGATTGCCATCTaGGGAAGGAGTCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSVIAI*GRSLTC
Trigger: GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTTTCCACCTCACATATTaGGAGCAGGGGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFFHLTY*EQGVRR
Trigger: CCTCCTCACCCCCTGCTCCAAATATGTGAGGTGGAA...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGGCGGCCCATGTCCTaGCTCCTAGCTCAAGGCCTA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHWRPMS*LLAQGL
Trigger: TAGGCCTTGAGCTAGGAGCAAGGACATGGGCCGCCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCCTTCCGGATGGTGTaGGGGACCTGGAGTTTGTCG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHAFRMV*GTWSLS
Trigger: CGACAAACTCCAGGTCCCCAACACCATCCGGAAGGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGAGGATGTTCCCATaGCTTGGACTGGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLRMFP*LGLVAI
Trigger: GATGGCCACCAGTCCAAGCAATGGGAACATCCTCAA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp TCGTTCCATGCCTTCCGGATGGTGTTGGGGACCTGGAGTTTGTCGTaGATCACAGCCGAGAAAGCAGGGTCCTGTGAGGTCCAGAATTTC +
Preference number: 5 (lower is better)
Translates to: SFHAFRMVLGTWSLS*ITAEKAGSCEVQNF
Trigger: GAAATTCTGGACCTCACAGGACCCTGCTTTCTCGGCTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS TCA 90 bp TGCAACCTTTGGAGATTATTACACAGTGGTGCGGGCCACGGGGATTaGGGGATTCGAGGGACCTTCTGTCGCCCATGTGACGCAGATTTC +
Preference number: 5 (lower is better)
Translates to: CNLWRLLHSGAGHGD*GIRGTFCRPCDADF
Trigger: GAAATCTGCGTCACATGGGCGACAGAAGGTCCCTCGAATCCCTCAATCCCCGTGGCCCGCACCACTGTGTAATAATCTCCAAAGGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTGTGTCCTTCACCTTGTaGACAGCCCTCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLVSFTL*TALSRQ
Trigger: CTGCCTGCTGAGGGCTGTCAACAAGGTGAAGGACAC...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCGAAGGCAAACATCTTaGGAGGAACCTGGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRRQTS*EEPGCL
Trigger: GAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTCG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCGTTCGTTTATGAGCTaGAAGAGCCAAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCRSFMS*KSQEMA
Trigger: TGCCATCTCTTGGCTCTTCAAGCTCATAAACGAACG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTATGTGTTTGCTGCCATaGACGAGAGCCAGGATGACA +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAMCLLP*TRARMT
Trigger: TGTCATCCTGGCTCTCGTCAATGGCAGCAAACACAT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAGCTCGGCAAACGTGTaGCACTTCAGGCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASSANV*HFRQSL
Trigger: AAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGCT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCACCGGGGGCCTCTGCTaGCCTGCTCTGGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESTGGLC*PALAQT
Trigger: AGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGCAGAGCAGTCGCTGTaGAAGCTGATGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCAEQSL*KLMMLV
Trigger: CACCAGCATCATCAGCTTCAACAGCGACTGCTCTGC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCACAGGTTCTGCCATaGCCTCCCCGTGCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPQVLP*PPRAQN
Trigger: GTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGACAGGATGAGCAAGTaGTCGGGGCTGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDDRMSK*SGLALG
Trigger: GCCCAAGGCCAGCCCCGACAACTTGCTCATCCTGTC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGATGGGGGCTGCTTaGTTGAAAGAGTCATCTCCC +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGLMGAA*LKESSP
Trigger: GGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAA...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTGATATTTTGCAGCCTTaGATGGGGGCTGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCDILQP*MGAALL
Trigger: CAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATC...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGAAGATATGCTGCATTaGAGGGCAAAAGGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTREDMLH*RAKGKR
Trigger: ACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGTGGCTGGGGCTGAGTaGTTGGTTAATAAAGACAGC +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAVAGAE*LVNKDS
Trigger: GCTGTCTTTATTAACCAACAACTCAGCCCCAGCCAC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCACTTACACAAGTGCTTaGAGGCCAGAGGCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCTYTSA*RPEASP
Trigger: TGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCTTCCACCTCACATATTaGGAGCAGGGGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCFHLTY*EQGVRR
Trigger: CCTCCTCACCCCCTGCTCCAAATATGTGAGGTGGAA...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGGACACATCTCTGCATTaGCATCTTAATGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRDTSLH*HLNAPP
Trigger: TGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTC...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTCCAGTGTTATGACATaGCTGCAGGTTCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSSVMT*LQVLGR
Trigger: CCTACCCAGAACCTGCAGCAATGTCATAACACTGGA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGTGGCGGCCCATGTCCTaGCTCCTAGCTCAAGGCCTA +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKWRPMS*LLAQGL
Trigger: TAGGCCTTGAGCTAGGAGCAAGGACATGGGCCGCCA...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGCCTTCCGGATGGTGTaGGGGACCTGGAGTTTGTCG +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGAFRMV*GTWSLS
Trigger: CGACAAACTCCAGGTCCCCAACACCATCCGGAAGGC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACCAGGGTGGGGATGTaGGAGAGCGGTGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTRVGM*ESGGGE
Trigger: CTCCCCGCCACCGCTCTCCAACATCCCCACCCTGGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp TGCATCTTGGAGGCTGGGAGTTCAGGGCCTTCTCTGTTGGTCAGCTaGCCTTCGGACCCATTATCTTCCTTATCAGACTCAGAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: CILEAGSSGPSLLVS*PSDPLSSLSDSESG
Trigger: CCCACTCTCTGAGTCTGATAAGGAAGATAATGGGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTGAACTCCCAGCCTCCAAGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp GGATGTGTACTTCGTCTTCTTTTTCTTCATCCTCAAGACTCTCGATaGAATCTGGATGGTGGACAGGGTCTCCGCGTAGCTCCCGACCGC +
Preference number: 5 (lower is better)
Translates to: GCVLRLLFLHPQDSR*NLDGGQGLRVAPDR
Trigger: GCGGTCGGGAGCTACGCGGAGACCCTGTCCACCATCCAGATTGCATCGAGAGTCTTGAGGATGAAGAAAAAGAAGACGAAGTACACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 90 bp AGGGGAGGTCTGCAGAATCCCACTGAAGCTGGTTGCAAAGAGCGGTaGTTCGGCAGCGGAAGAAGTGGAAGGCCGATGTTTCTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: RGGLQNPTEAGCKER*FGSGRSGRPMFLLF
Trigger: AAAAAGAAGAAACATCGGCCTTCCACTTCTTCCGCTGCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAGACCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCGAAGGCAAACATCTTaGGAGGAACCTGGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAARRQTS*EEPGCL
Trigger: GAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTCG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGCCTGAGAAGCGTCTaGTGGAAAAACTGCATCGAA +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASLRSV*WKNCIE
Trigger: TTCGATGCAGTTTTTCCACAAGACGCTTCTCAGGCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGAGCCTGAGAAGCGTCTaGTGGAAAAACTGCATCGAA +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRSLRSV*WKNCIE
Trigger: TTCGATGCAGTTTTTCCACAAGACGCTTCTCAGGCT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTCGTTCGTTTATGAGCTaGAAGAGCCAAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPARSFMS*KSQEMA
Trigger: TGCCATCTCTTGGCTCTTCAAGCTCATAAACGAACG...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGCGCCGGTCTTTTCCTaGCGTTCGTTTATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPAPVFS*RSFMSL
Trigger: CAAGCTCATAAACGAACGCAAGGAAAAGACCGGCGC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAAGAACACGTGTGAGTaGCGGTGGTCGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPKNTCE*RWSSSS
Trigger: TGATGAGGACGACCACCGCAACTCACACGTGTTCTT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTCCTCCTTCTCGATTTTaGCTAAGAGCTTTCACACAG +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCPPSRF*LRAFTQ
Trigger: CTGTGTGAAAGCTCTTAGCAAAAATCGAGAAGGAGG...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGTTGTATGGAATGTGTTaGCTGCCATTGACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRLYGMC*LPLTRA
Trigger: GGCTCTCGTCAATGGCAGCAAACACATTCCATACAA...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTAGCAACATGGCGAGCTaGCTCTCTTTGTATGGAATG +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPASNMAS*LSLYGM
Trigger: CATTCCATACAAAGAGAGCAAGCTCGCCATGTTGCT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGCTCGGCAAACGTGTaGCACTTCAGGCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPSSANV*HFRQSL
Trigger: AAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGATGGTGACCATGGCCTaGCTCACTGTGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRMVTMA*LTVDIL
Trigger: CAAAATATCCACAGTGAGCAAGGCCATGGTCACCAT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTATGGTGACCATGGCCTaGCTCACTGTGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: DLGRRQAECHSPRKDSIGMVTMA*LTVDIL
Trigger: CAAAATATCCACAGTGAGCAAGGCCATGGTCACCAT...ACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTCAGATTGGCCGTGTaGGAGATGGTGACCATGGCC +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLRLAV*EMVTMA
Trigger: GGCCATGGTCACCATCTCCAACACGGCCAATCTGAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGACTTGACGCTTTTGTaGGGATGCACGGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKDLTLL*GCTGLW
Trigger: CCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACGTTTCTTCGGGGTCTaGAGGCTCCGGCACCTGCCG +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRRFFGV*RLRHLP
Trigger: CGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAACG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTATCTTCAGCTTTGCATaGAAGCACATGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAIFSFA*KHMASL
Trigger: CAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGAT...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGCATCAGATACTGTTaGGTCGCCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCSIRYC*VASSSF
Trigger: GAAGGAGCTGGAGGCGACCAAACAGTATCTGATGCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTCAGTCTCACAGGGCTaGGACACCCCTCGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESSVSQG*DTPRAS
Trigger: GGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTGA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCSFWVV*CSLSTA
Trigger: TGCTGTGGAAAGCGAACACAAAACAACCCAGAATGA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTACACACTTGTCAGACTaGGGAGATACACAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCTHLSD*GDTQKE
Trigger: TTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTACTTACACAAGTGCTTaGAGGCCAGAGGCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPTYTSA*RPEASP
Trigger: TGGGCTCGCCTCTGGCCTCAAAGCACTTGTGTAAGT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGCAAACTCGAAGGATaGGCTTCCCTTTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGKLEG*ASLWVQ
Trigger: CTGGACCCAAAGGGAAGCCAATCCTTCGAGTTTGCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTGACACATCTCTGCATTaGCATCTTAATGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPADTSLH*HLNAPP
Trigger: TGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTC...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTGCCCCCACCAAAATTaGAGACCCATTTACTTGCAT +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCCPHQN*RPIYLH
Trigger: ATGCAAGTAAATGGGTCTCAAATTTTGGTGGGGGCA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGTGTTACCCACCAATGTaGACAGATACTTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRCYPPM*TDTFWR
Trigger: CCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACA...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTTGAGGATGTTCCCATaGCTTGGACTGGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLRMFP*LGLVAI
Trigger: GATGGCCACCAGTCCAAGCAATGGGAACATCCTCAA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGCATGACTTTCACCTaGCCCAGCCCCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSMTFT*PSPGVS
Trigger: GGACACCCCGGGGCTGGGCAAGGTGAAAGTCATGCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCAGCCATCTGCCCCGTaGACCACAGACTGGATCACC +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESQPSAP*TTDWIT
Trigger: GGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCGTTCGTTTATGAGCTaGAAGAGCCAAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFRSFMS*KSQEMA
Trigger: TGCCATCTCTTGGCTCTTCAAGCTCATAAACGAACG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAAGAACACGTGTGAGTaGCGGTGGTCGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHKNTCE*RWSSSS
Trigger: TGATGAGGACGACCACCGCAACTCACACGTGTTCTT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTGCGAGCTTGCTCTCTTaGTATGGAATGTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFASLLS*YGMCLL
Trigger: CAGCAAACACATTCCATACAAAGAGAGCAAGCTCGC...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGAGCTCGGCAAACGTGTaGCACTTCAGGCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKSSANV*HFRQSL
Trigger: AAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGCT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATTGTCGGGGCTGGCCTaGGGCTTCTCTCTGCACACC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLSGLA*GFSLHT
Trigger: GGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACAA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACGACCCTCCTGAAGTaGTCAGTGACCGGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTTLLK*SVTGEA
Trigger: GGCCTCCCCGGTCACTGACAACTTCAGGAGGGTCGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTGGACTGGCCGGCCTaGGGCGAGGCCCCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLDWPA*GEAPEL
Trigger: CAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGCCTGCGGCAGGGACTaGGTGGAGAAGCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRACGRD*VEKLRV
Trigger: AACCCTCAGCTTCTCCACCAAGTCCCTGCCGCAGGC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAATTCACTGAGCCACTaGTTGGGATCCAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFNSLSH*LGSSIR
Trigger: TCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAALLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTCAGTCTCACAGGGCTaGGACACCCCTCGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSVSQG*DTPRAS
Trigger: GGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTGA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGGAAGTCTCTCTGTTaGAGTGGCCTCACCAGAATA +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGKSLC*SGLTRI
Trigger: TATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGTGGCTGGGGCTGAGTaGTTGGTTAATAAAGACAGC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCVAGAE*LVNKDS
Trigger: GCTGTCTTTATTAACCAACAACTCAGCCCCAGCCAC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGTGGCTGGGGCTGAGTaGTTGGTTAATAAAGACAGC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPVAGAE*LVNKDS
Trigger: GCTGTCTTTATTAACCAACAACTCAGCCCCAGCCAC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGTTCAGCCAGCAGATTaGGGCATGTCTCCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPVQPAD*GMSPVC
Trigger: GCAAACAGGAGACATGCCCAAATCTGCTGGCTGAAC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AGCCCAGAGCATGCGACTGTCCTGCAGAATGGGGTCAAGGTTAAGGAGCTCAGGACACACTTGTCAGACTaGGGAGATACACAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SPEHATVLQNGVKVKELRTHLSD*GDTQKE
Trigger: TTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGT...CCTGAGCTCCTTAACCTTGACCCCATTCTGCAGGACAGTCGCATGCTCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAGGATTGGCTTCCCTTaGGGTCCAGAAGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGRIGFP*GPEASK
Trigger: CTTGGAGGCTTCTGGACCCAAAGGGAAGCCAATCCT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCTCTGTGATTGCCATCTaGGGAAGGAGTCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASVIAI*GRSLTC
Trigger: GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGA...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTATAGAAATGGGTTCGTaGATATTCCCCCTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFIEMGS*IFPLAS
Trigger: GGAGGCAAGGGGGAATATCAACGAACCCATTTCTAT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCAGGGGTTCCCACCTTaGTCAAGACAGGACACATCT +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHQGFPP*SRQDTS
Trigger: AGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTAACAAATCTGCAGATTaGTCAGCCTTGCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCNKSAD*SALPSI
Trigger: GATAGAAGGCAAGGCTGACAAATCTGCAGATTTGTT...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGAACAAATCTGCAGATTaGTCAGCCTTGCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRNKSAD*SALPSI
Trigger: GATAGAAGGCAAGGCTGACAAATCTGCAGATTTGTT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTCTTGATGCTCTCCCAGAAGGGCAGCTGTTCTGACCCCCAGTCTTCCACTCGGACGGCTGTGTTTGCATaGAACAAATCTGCAGATTTG +
Preference number: 5 (lower is better)
Translates to: LLMLSQKGSCSDPQSSTRTAVFA*NKSADL
Trigger: CAAATCTGCAGATTTGTTCAATGCAAACACAGCCGT...CCGAGTGGAAGACTGGGGGTCAGAACAGCTGCCCTTCTGGGAGAGCATCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGTATGCAATGAAGGCTaGATACTGCCCCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHVCNEG*ILPQAA
Trigger: TGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATAC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTAGTAATAGCACCAATTaGCAGAAAGGGTTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFSNSTN*QKGLGS
Trigger: CGACCCCAACCCTTTCTGCAAATTGGTGCTATTACT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGATCTGGAGGCTGACCTaGGCCTGGTGGGTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKIWRLT*AWWVGD
Trigger: GTCCCCAACCCACCAGGCCAAGGTCAGCCTCCAGAT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGGATGTTCCCATTGCTaGGACTGGTGGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGGCSHC*DWWPSG
Trigger: TCCAGATGGCCACCAGTCCAAGCAATGGGAACATCC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GGTGCCTGCACACACTTCAGCCTGAGAAGCGTCTTGTGGAAAAACTaGATCGAAGGCAAACATCTTTGGAGGAACCTGGTTGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GACTHFSLRSVLWKN*IEGKHLWRNLVASL
Trigger: AAGAGAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTCGATGCAGTTTTTCCACAAGACGCTTCTCAGGCTGAAGTGTGTGCAGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 90 bp CTGGAAAGCCTGTCCGCATCGTTTTCATCCTTGCGACGTCTAAATTaGAGAAAGGCAGAGTCGTCTTCTCCCTCATTTCTAGAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: LESLSASFSSLRRLN*RKAESSSPSFLEAR
Trigger: CCGAGCCTCTAGAAATGAGGGAGAAGACGACTCTGCCTTTCTGCAATTTAGACGTCGCAAGGATGAAAACGATGCGGACAGGCTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CCA 90 bp TGGTGGAGACCGCAAGCCTCTCTTTATTCCCAGCTACCGAATTCATaGTGGCTTTTCCAGAGGAGAGTATCTAAAGGTTCCACCGACGCT +
Preference number: 5 (lower is better)
Translates to: WWRPQASLYSQLPNS*WLFQRRVSKGSTDA
Trigger: AGCGTCGGTGGAACCTTTAGATACTCTCCTCTGGAAAAGCCACCATGAATTCGGTAGCTGGGAATAAAGAGAGGCTTGCGGTCTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCTTTTGGAAGGCATTTaGACCTCCACAAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLLEGI*TSTSQG
Trigger: CCCCTGACTTGTGGAGGTCAAAATGCCTTCCAAAAG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAGCCTGAGAAGCGTCTaGTGGAAAAACTGCATCGAA +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASLRSV*WKNCIE
Trigger: TTCGATGCAGTTTTTCCACAAGACGCTTCTCAGGCT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCGCCGGTCTTTTCCTaGCGTTCGTTTATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKAPVFS*RSFMSL
Trigger: CAAGCTCATAAACGAACGCAAGGAAAAGACCGGCGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTCCTCCTTCTCGATTTTaGCTAAGAGCTTTCACACAG +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFPPSRF*LRAFTQ
Trigger: CTGTGTGAAAGCTCTTAGCAAAAATCGAGAAGGAGG...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATATGTGTTTGCTGCCATaGACGAGAGCCAGGATGACA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHMCLLP*TRARMT
Trigger: TGTCATCCTGGCTCTCGTCAATGGCAGCAAACACAT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCGCGAGCTTGCTCTCTTaGTATGGAATGTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAAASLLS*YGMCLL
Trigger: CAGCAAACACATTCCATACAAAGAGAGCAAGCTCGC...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAGCAACATGGCGAGCTaGCTCTCTTTGTATGGAATG +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAASNMAS*LSLYGM
Trigger: CATTCCATACAAAGAGAGCAAGCTCGCCATGTTGCT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTTGTACTCCGAGGTCTaGGACAGGCTGGCGATGCCC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKLYSEV*DRLAMP
Trigger: GGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACAA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGGAGAGCTGGGTGGCTaGTACTCCGAGGTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKGELGG*YSEVLD
Trigger: GTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGAGAGCTGGGTGGCTaGTACTCCGAGGTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGELGG*YSEVLD
Trigger: GTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTGATGGGGGCTGCTTaGTTGAAAGAGTCATCTCCC +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLMGAA*LKESSP
Trigger: GGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCATGGTGACCATGGCCTaGCTCACTGTGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCMVTMA*LTVDIL
Trigger: CAAAATATCCACAGTGAGCAAGGCCATGGTCACCAT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGACTTGACGCTTTTGTaGGGATGCACGGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESDLTLL*GCTGLW
Trigger: CCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGAAGGCTGCTGGACTaGACGCTTTTGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGRLLD*TLLLGC
Trigger: GCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGCCAGCTGCTCCAGCTaGGCACTGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKASCSS*ALKSLL
Trigger: CAGCAAGCTCTTCAGTGCCAAGCTGGAGCAGCTGGC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAAGCATCAGATACTGTTaGGTCGCCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGSIRYC*VASSSF
Trigger: GAAGGAGCTGGAGGCGACCAAACAGTATCTGATGCT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTGTCAGACTTGGGAGATACACAGAAGGAAGAACGAGCCATGCCAGAGCAGCCAATTCACTGAGCCACTaGTTGGGATCCAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: LVRLGRYTEGRTSHARAANSLSH*LGSSIR
Trigger: TCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATT...GGCTGCTCTGGCATGGCTCGTTCTTCCTTCTGTGTATCTCCCAAGTCTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACCTCATTCATTGTCTTaGATGCCCCAGCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGPHSLS*MPQHRG
Trigger: CCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAACGCCCGCTCCAGACTaGCCACCAACCTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRTPAPD*PPTFIL
Trigger: GAGGATGAAGGTTGGTGGCAAGTCTGGAGCGGGCGT...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGGGAAGTCTCTCTGTTaGAGTGGCCTCACCAGAATA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHGKSLC*SGLTRI
Trigger: TATTCTGGTGAGGCCACTCAAACAGAGAGACTTCCC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGGGCATGTCTCCTGTTaGCACCTTTGCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPGHVSC*HLCIEA
Trigger: TGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTTAGGCAGGAGGCAAGCCGAATGCCACTCCCCTCGGAAGGATTCCATCGGTTTACACACTTGTCAGACTaGGGAGATACACAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FRQEASRMPLPSEGFHRFTHLSD*GDTQKE
Trigger: TTCCTTCTGTGTATCTCCCAAGTCTGACAAGTGTGT...AAACCGATGGAATCCTTCCGAGGGGAGTGGCATTCGGCTTGCCTCCTGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCGACACATCTCTGCATTaGCATCTTAATGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCDTSLH*HLNAPP
Trigger: TGGGGGAGCATTAAGATGCAAATGCAGAGATGTGTC...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTCCAGTGTTATGACATaGCTGCAGGTTCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHSSVMT*LQVLGR
Trigger: CCTACCCAGAACCTGCAGCAATGTCATAACACTGGA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTCCAGTGTTATGACATaGCTGCAGGTTCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLSSVMT*LQVLGR
Trigger: CCTACCCAGAACCTGCAGCAATGTCATAACACTGGA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCCACACGTGTGGACCTaGGGAACAACTATGCTTAGA +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHPHVWT*GTTMLR
Trigger: TCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTGG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTTTATACCACTTTCTCTaGATGCTCTCCCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPLYHFL*MLSQKG
Trigger: GCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATAA...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGGATGGCCACCGAATaGAGGATGTTCCCATTGCTT +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHWMATE*RMFPLL
Trigger: AAGCAATGGGAACATCCTCAATTCGGTGGCCATCCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 90 bp TCAGCCCTCAGGGCAAGGTTTCTTCAGCGGTGGGGTGGGAGGGAATaGAAGCAAATGGATCCCACAAGTAATAGCACCAATTTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SALRARFLQRWGGRE*KQMDPTSNSTNLQK
Trigger: TTTCTGCAAATTGGTGCTATTACTTGTGGGATCCATTTGCTTTCATTCCCTCCCACCCCACCGCTGAAGAAACCTTGCCCTGAGGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGATATTTTGCAGCCTTaGATGGGGGCTGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPDILQP*MGAALL
Trigger: CAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTCAGATTGGCCGTGTaGGAGATGGTGACCATGGCC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLRLAV*EMVTMA
Trigger: GGCCATGGTCACCATCTCCAACACGGCCAATCTGAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGGGGGCCTCCGGCTCTaGGATGTTCCGGGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVGGLRL*DVPGAH
Trigger: ATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCCC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGGGGCCTCCGGCTCTaGGATGTTCCGGGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGGLRL*DVPGAH
Trigger: ATGAGCCCCCGGAACATCCAAGAGCCGGAGGCCCCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTGGACTTGACGCTTTaGTTGGGATGCACGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLDLTL*LGCTGL
Trigger: GAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGAAGGCTGCTGGACTaGACGCTTTTGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGRLLD*TLLLGC
Trigger: GCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTCACGGCGGAGATCTaGGACTGGCCGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLTAEI*DWPALG
Trigger: GCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGCATCAGATACTGTTaGGTCGCCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSIRYC*VASSSF
Trigger: GAAGGAGCTGGAGGCGACCAAACAGTATCTGATGCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCACAGGGCTTGGACACCCCTCGGGCTTCCCATCCTTTTCTCCTTCCACGGTGTTTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 5 (lower is better)
Translates to: SQGLDTPRASHPFLLPRCFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...ACACCGTGGAAGGAGAAAAGGATGGGAAGCCCGAGGGGTGTCCAAGCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTATAGAAATGGGTTCGTaGATATTCCCCCTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLIEMGS*IFPLAS
Trigger: GGAGGCAAGGGGGAATATCAACGAACCCATTTCTAT...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHADLSA*PSIQRR
Trigger: CCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGC...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTCCCGTGTGGTGGCATaGAAGAGTGTCCTTCATGGG +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESSRVVA*KSVLHG
Trigger: CCCATGAAGGACACTCTTCAATGCCACCACACGGGA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTCCAGCTTTGTTTCATTaGGTGCAGAGAAAAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLPALFH*VQRKVG
Trigger: GCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGG...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAAC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRDLSH*AAYYRN
Trigger: GTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTGGGTTGTTTTGTGTTCGCTTTCCACAGCAATCCTACATCCACGCCCCTCCTTTTATACCACTTTCTCTaGATGCTCTCCCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LGCFVFAFHSNPTSTPLLLYHFL*MLSQKG
Trigger: GCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATAA...AAGGAGGGGCGTGGATGTAGGATTGCTGTGGAAAGCGAACACAAAACAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGCAAATGTCACAGCGGTaGTCCCGGTCGTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKQMSQR*SRSFHA
Trigger: GGCATGGAACGACCGGGACAACCGCTGTGACATTTG...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp CATGGCCTTGCTCACTGTGGATATTTTGCAGCCTTTGATGGGGGCTaGTTTGTTGAAAGAGTCATCTCCCATCTCAGACAGGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: HGLAHCGYFAAFDGG*FVERVISHLRQDEQ
Trigger: TTGCTCATCCTGTCTGAGATGGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATCCACAGTGAGCAAGGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACCGGGGGCCTCTGCTaGCCTGCTCTGGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTGGLC*PALAQT
Trigger: AGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGCAGAGCAGTCGCTGTaGAAGCTGATGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRAEQSL*KLMMLV
Trigger: CACCAGCATCATCAGCTTCAACAGCGACTGCTCTGC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCTGGCGTCCTTCGTCTaGCCGCTAGGCTCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLASFV*PLGSSG
Trigger: CCCAGACGAGCCTAGCGGCAAGACGAAGGACGCCAG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCTGGCGTCCTTCGTCTaGCCGCTAGGCTCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLASFV*PLGSSG
Trigger: CCCAGACGAGCCTAGCGGCAAGACGAAGGACGCCAG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGAAGCACATGGCCTCCTaGCTGGCACCCCCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKKHMAS*LAPPRR
Trigger: GCGACGAGGGGGTGCCAGCAAGGAGGCCATGTGCTT...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAAGCACATGGCCTCCTaGCTGGCACCCCCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTKHMAS*LAPPRR
Trigger: GCGACGAGGGGGTGCCAGCAAGGAGGCCATGTGCTT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGATCTTCAGCTTTGCATaGAAGCACATGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKIFSFA*KHMASL
Trigger: CAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGAT...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCACTGAGCCACTTGTaGGGATCCAGCATCAGATAC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSLSHL*GSSIRY
Trigger: GTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCCTCATTCATTGTCTTaGATGCCCCAGCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESPHSLS*MPQHRG
Trigger: CCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TATGACAAACCAGGCCAGATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 5 (lower is better)
Translates to: YDKPGQIPACLIPHAAMPRVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...AGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATCTGGCCTGGTTTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCRVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GATTCCTGCCTGTCTAATTCCCCACGCTGCGATGCCTGGCTGTTTACCCCAGCTTTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 5 (lower is better)
Translates to: DSCLSNSPRCDAWLFTPAFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...AGCTGGGGTAAACAGCCAGGCATCGCAGCGTGGGGAATTAGACAGGCAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGAAGATATGCTGCATTaGAGGGCAAAAGGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGEDMLH*RAKGKR
Trigger: ACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGCTGGGGCTGAGTTGTaGGTTAATAAAGACAGCCTA +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGAGAEL*VNKDSL
Trigger: TAGGCTGTCTTTATTAACCAACAACTCAGCCCCAGC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGGCATGTCTCCTGTTaGCACCTTTGCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGHVSC*HLCIEA
Trigger: TGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGGGAAGGAGTCTGACTaGCTAAGAGAACTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKGKESD*LRELLV
Trigger: AACCAAGAGTTCTCTTAGCAAGTCAGACTCCTTCCC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACCAACAAGATCAAAGTTaGCAGCTCGCAGGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDQQDQS*QLAGGN
Trigger: GTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTG...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGADLSA*PSIQRR
Trigger: CCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGC...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGGCAGATTTGTCAGCCTaGCCTTCTATCCAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKADLSA*PSIQRR
Trigger: CCTTCTTTGGATAGAAGGCAAGGCTGACAAATCTGC...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CGAGATCCTGCGAGGTGTTCTGTGATTGCCATCTTGGGAAGGAGTCTGACTTGCACGGCTGTGTTTGCATaGAACAAATCTGCAGATTTG +
Preference number: 5 (lower is better)
Translates to: RDPARCSVIAILGRSLTCTAVFA*NKSADL
Trigger: CAAATCTGCAGATTTGTTCAATGCAAACACAGCCGT...GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGAACACCTCGCAGGATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCCAGCTTTGTTTCATTaGGTGCAGAGAAAAGTGGGC +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKPALFH*VQRKVG
Trigger: GCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATTGCCCCCACCAAAATTaGAGACCCATTTACTTGCAT +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHCPHQN*RPIYLH
Trigger: ATGCAAGTAAATGGGTCTCAAATTTTGGTGGGGGCA...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATCTAATCCCTATTCTCTaGCTTTATCTGTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHLIPIL*LYLSSP
Trigger: GGGAGAGGACAGATAAAGCAAGAGAATAGGGATTAG...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTCTAATCCCTATTCTCTaGCTTTATCTGTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLIPIL*LYLSSP
Trigger: GGGAGAGGACAGATAAAGCAAGAGAATAGGGATTAG...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACTCATCACAGTCCTGTaGGTGGCTCCTGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLITVL*VAPAGG
Trigger: GCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATGTGTTTGCTGCCATaGACGAGAGCCAGGATGACA +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESMCLLP*TRARMT
Trigger: TGTCATCCTGGCTCTCGTCAATGGCAGCAAACACAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTTGTATGGAATGTGTTaGCTGCCATTGACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDLYGMC*LPLTRA
Trigger: GGCTCTCGTCAATGGCAGCAAACACATTCCATACAA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAGCAACATGGCGAGCTaGCTCTCTTTGTATGGAATG +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSNMAS*LSLYGM
Trigger: CATTCCATACAAAGAGAGCAAGCTCGCCATGTTGCT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATTGTCGGTGAGCTCCTaGTCAGAGAGGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLSVSS*SERAVP
Trigger: CGGCACGGCCCTCTCTGACAAGGAGCTCACCGACAA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTGTCGGTGAGCTCCTaGTCAGAGAGGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLSVSS*SERAVP
Trigger: CGGCACGGCCCTCTCTGACAAGGAGCTCACCGACAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCCTCAGGATCTCCTTCTaGGACTCTGAAGGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESLRISF*DSEGVA
Trigger: AGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAG...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTGTCGGGGCTGGCCTaGGGCTTCTCTCTGCACACC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLSGLA*GFSLHT
Trigger: GGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGACAGGATGAGCAAGTaGTCGGGGCTGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTDRMSK*SGLALG
Trigger: GCCCAAGGCCAGCCCCGACAACTTGCTCATCCTGTC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTACGACCCTCCTGAAGTaGTCAGTGACCGGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISTTLLK*SVTGEA
Trigger: GGCCTCCCCGGTCACTGACAACTTCAGGAGGGTCGT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAGAGGGGGAGTCCCTTaGGGCCGAGCCAGAACACAG +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRGGVP*GRARTQ
Trigger: CTGTGTTCTGGCTCGGCCCAAAGGGACTCCCCCTCT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGCCTGCGGCAGGGACTaGGTGGAGAAGCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKACGRD*VEKLRV
Trigger: AACCCTCAGCTTCTCCACCAAGTCCCTGCCGCAGGC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACATCTTCAGCTTTGCATaGAAGCACATGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDIFSFA*KHMASL
Trigger: CAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGAT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATGGGCCTTGCAGAAGTaGACACGGCTCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVWALQK*TRLSRR
Trigger: GCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCCA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCAGTCTCACAGGGCTaGGACACCCCTCGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSVSQG*DTPRAS
Trigger: GGAAGCCCGAGGGGTGTCCAAGCCCTGTGAGACTGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CAAATCTCCACCTCGATGCACGGCACGTGGATAGCATTTCCAACCGTGATGCATAGAGTGAGGTCTCTTTaGCTAGCAGTTCTTATGTAC +
Preference number: 5 (lower is better)
Translates to: QISTSMHGTWIAFPTVMHRVRSL*LAVLMY
Trigger: GTACATAAGAACTGCTAGCAAAAGAGACCTCACTCT...ATGCATCACGGTTGGAAATGCTATCCACGTGCCGTGCATCGAGGTGGAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAGGCTTTGGGACACAGGAGAGCTGAAATCCTTGTACTCTGGACAACAGACAAGCTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTA +
Preference number: 5 (lower is better)
Translates to: EALGHRRAEILVLWTTDKLLFAP*HRSRLL
Trigger: TAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAG...CTTGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCCTGTGTCCCAAAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCGGGCATGTCTCCTGTTaGCACCTTTGCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESGHVSC*HLCIEA
Trigger: TGCTTCTATGCAAAGGTGCAAACAGGAGACATGCCC...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGTTCAGCCAGCAGATTaGGGCATGTCTCCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKVQPAD*GMSPVC
Trigger: GCAAACAGGAGACATGCCCAAATCTGCTGGCTGAAC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTGTTTCCTTCCGCCTTTaGTTACAGCATAAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPVSFRL*LQHKVA
Trigger: AGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAAC...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACATAGAAATGGGTTCGTaGATATTCCCCCTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDIEMGS*IFPLAS
Trigger: GGAGGCAAGGGGGAATATCAACGAACCCATTTCTAT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACAGGGGTTCCCACCTTaGTCAAGACAGGACACATCT +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRQGFPP*SRQDTS
Trigger: AGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGTATGCAATGAAGGCTaGATACTGCCCCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRVCNEG*ILPQAA
Trigger: TGCGGCTTGGGGCAGTATCAAGCCTTCATTGCATAC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGACTAATCCCTATTCTCTaGCTTTATCTGTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGLIPIL*LYLSSP
Trigger: GGGAGAGGACAGATAAAGCAAGAGAATAGGGATTAG...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTAGAGATCCAGAGCTaGAAGGAACCACAAAGATCA +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPLEIQS*KEPQRS
Trigger: TGATCTTTGTGGTTCCTTCAAGCTCTGGATCTCTAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACTTTTGGAAGGCATTTaGACCTCCACAAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRLLEGI*TSTSQG
Trigger: CCCCTGACTTGTGGAGGTCAAAATGCCTTCCAAAAG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTACAGTCCCTTTCTGACTaGCCGGCTGCAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVQSLSD*PAAASP
Trigger: AGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACTG...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACAGTCCCTTTCTGACTaGCCGGCTGCAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKQSLSD*PAAASP
Trigger: AGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACTG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTGTACTCCGAGGTCTaGGACAGGCTGGCGATGCCC +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLYSEV*DRLAMP
Trigger: GGGCATCGCCAGCCTGTCCAAGACCTCGGAGTACAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGAGAGCTGGGTGGCTaGTACTCCGAGGTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGELGG*YSEVLD
Trigger: GTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGTCACTGAGCCACTTGTaGGGATCCAGCATCAGATAC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKSLSHL*GSSIRY
Trigger: GTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGA...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACTCATTCTGGGTTGTTTaGTGTTCGCTTTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDSFWVV*CSLSTA
Trigger: TGCTGTGGAAAGCGAACACAAAACAACCCAGAATGA...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGAGCCAACAGGGCCACCTGAACCCTGTTCTGATAACAAAGGAATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SKAHEPTGPPEPCSDNKGISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...TCCTTTGTTATCAGAACAGGGTTCAGGTGGCCCTGTTGGCTCATGTGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGACCACACGTGTGGACCTaGGGAACAACTATGCTTAGA +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRPHVWT*GTTMLR
Trigger: TCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTGG...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGGATATTTTGCAGCCTTaGATGGGGGCTGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKDILQP*MGAALL
Trigger: CAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATC...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTCAGATTGGCCGTGTaGGAGATGGTGACCATGGCC +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLRLAV*EMVTMA
Trigger: GGCCATGGTCACCATCTCCAACACGGCCAATCTGAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCTGGACTTGACGCTTTaGTTGGGATGCACGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLDLTL*LGCTGL
Trigger: GAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CACCACCGCCCGTTCTTAGATCTTAGTTTTGCTCCGCTGCTAATGCTTCCACCTTTTGTTGTTTTCATCTaGACTAGCACCATCTGTACA +
Preference number: 5 (lower is better)
Translates to: HHRPFLDLSFAPLLMLPPFVVFI*TSTICT
Trigger: TGTACAGATGGTGCTAGTCAAGATGAAAACAACAAA...AGGTGGAAGCATTAGCAGCGGAGCAAAACTAAGATCTAAGAACGGGCGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTATGGCTCTGGTGAATaGGTTCCAGCTTTCGTTCAA +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESYGSGE*VPAFVQ
Trigger: TTGAACGAAAGCTGGAACCAATTCACCAGAGCCATA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGGGAAGGAGTCTGACTaGCTAAGAGAACTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRGKESD*LRELLV
Trigger: AACCAAGAGTTCTCTTAGCAAGTCAGACTCCTTCCC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TTCTGGGCTGCACTATCATCAGCACCACAGCTTTTATCAGGGAAATCCCTTGACAACAAATCTGCAGATTaGTCAGCCTTGCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: FWAALSSAPQLLSGKSLDNKSAD*SALPSI
Trigger: GATAGAAGGCAAGGCTGACAAATCTGCAGATTTGTT...GTCAAGGGATTTCCCTGATAAAAGCTGTGGTGCTGATGATAGTGCAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAAC +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESRDLSH*AAYYRN
Trigger: GTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTTCACCCCGTATTTCTaGCCCCTGGTGGAGACCGCA +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKFTPYF*PLVETA
Trigger: TGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCAAATGTCACAGCGGTaGTCCCGGTCGTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTQMSQR*SRSFHA
Trigger: GGCATGGAACGACCGGGACAACCGCTGTGACATTTG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 90 bp GGAGGGAATGAAAGCAAATGGATCCCACAAGTAATAGCACCAATTTaGAGAAAGGGTTGGGGTCGCTGGTTTATTCTTCTCTTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: GGNESKWIPQVIAPI*RKGWGRWFILLFKA
Trigger: TGCTTTGAAGAGAAGAATAAACCAGCGACCCCAACCCTTTCTGCAAATTGGTGCTATTACTTGTGGGATCCATTTGCTTTCATTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGCAGAGCAGTCGCTGTaGAAGCTGATGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKAEQSL*KLMMLV
Trigger: CACCAGCATCATCAGCTTCAACAGCGACTGCTCTGC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGAAGGCTGCTGGACTaGACGCTTTTGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGRLLD*TLLLGC
Trigger: GCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATCCCGTGTGGTGGCATaGAAGAGTGTCCTTCATGGG +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVSRVVA*KSVLHG
Trigger: CCCATGAAGGACACTCTTCAATGCCACCACACGGGA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGATGCCCCCACCAAAATTaGAGACCCATTTACTTGCAT +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRCPHQN*RPIYLH
Trigger: ATGCAAGTAAATGGGTCTCAAATTTTGGTGGGGGCA...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp CTTCAAAGCACTTCCCATCACTTATACCACTTTCTCTTGATGCTCTCCCAGAAGAGGGATCTTTCCCATTaGGCTGCTTACTACAGAAAC +
Preference number: 5 (lower is better)
Translates to: LQSTSHHLYHFLLMLSQKRDLSH*AAYYRN
Trigger: GTTTCTGTAGTAAGCAGCCAAATGGGAAAGATCCCT...CTTCTGGGAGAGCATCAAGAGAAAGTGGTATAAGTGATGGGAAGTGCTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp GAATTCAAGGACAACAAGATCAAAGTTTGCAGCTCGCAGGTGGGAACTGAAAGCTTAGAGATCCAGAGCTaGAAGGAACCACAAAGATCA +
Preference number: 5 (lower is better)
Translates to: EFKDNKIKVCSSQVGTESLEIQS*KEPQRS
Trigger: TGATCTTTGTGGTTCCTTCAAGCTCTGGATCTCTAA...GCTTTCAGTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTGTCCTTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGGATGTTCCCATTGCTaGGACTGGTGGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTGCSHC*DWWPSG
Trigger: TCCAGATGGCCACCAGTCCAAGCAATGGGAACATCC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCGAAGGCAAACATCTTaGGAGGAACCTGGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTRRQTS*EEPGCL
Trigger: GAGGCAACCAGGTTCCTCCAAAGATGTTTGCCTTCG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTAAGAACACGTGTGAGTaGCGGTGGTCGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISKNTCE*RWSSSS
Trigger: TGATGAGGACGACCACCGCAACTCACACGTGTTCTT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTATCATGAGATGGGCCTaGCAGAAGTTGACACGGCTC +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISIMRWA*QKLTRL
Trigger: GAGCCGTGTCAACTTCTGCAAGGCCCATCTCATGAT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCTCATTCATTGTCTTaGATGCCCCAGCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPHSLS*MPQHRG
Trigger: CCCTCTGTGCTGGGGCATCAAAGACAATGAATGAGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCCAGGGCAACACACTaGTCAGACTTGGGAGATACA +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPRATH*SDLGDT
Trigger: TGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACCCAGGGCAACACACTaGTCAGACTTGGGAGATACA +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKPRATH*SDLGDT
Trigger: TGTATCTCCCAAGTCTGACAAGTGTGTTGCCCTGGG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCAGCAGTGGCCAATGATATAGACGGCTGTGTTTGCATTGAACAAATCTGCAGAGTTTCCTTCCGCCTTTaGTTACAGCATAAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SAVANDIDGCVCIEQICRVSFRL*LQHKVA
Trigger: AGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAAC...TCTGCAGATTTGTTCAATGCAAACACAGCCGTCTATATCATTGGCCACTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACAGGGGTTCCCACCTTaGTCAAGACAGGACACATCT +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKQGFPP*SRQDTS
Trigger: AGATGTGTCCTGTCTTGACAAAGGTGGGAACCCCTG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTTTTGGAAGGCATTTaGACCTCCACAAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLLEGI*TSTSQG
Trigger: CCCCTGACTTGTGGAGGTCAAAATGCCTTCCAAAAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTCAGGATCTCCTTCTaGGACTCTGAAGGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLRISF*DSEGVA
Trigger: AGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCTTGATGGGGGCTGCTTaGTTGAAAGAGTCATCTCCC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLMGAA*LKESSP
Trigger: GGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAA...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTCACTGAGCCACTTGTaGGGATCCAGCATCAGATAC +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISSLSHL*GSSIRY
Trigger: GTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCTCCTTCCACGGTGTTaGACGTTTGCACCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLLPRC*TFAPFL
Trigger: TAGGAAAGGTGCAAACGTCAAACACCGTGGAAGGAG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGTCTGTGATTGCCATCTaGGGAAGGAGTCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKSVIAI*GRSLTC
Trigger: GCAAGTCAGACTCCTTCCCAAGATGGCAATCACAGA...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCAACAAGATCAAAGTTaGCAGCTCGCAGGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKQQDQS*QLAGGN
Trigger: GTTCCCACCTGCGAGCTGCAAACTTTGATCTTGTTG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTCCACACGTGTGGACCTaGGGAACAACTATGCTTAGA +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISPHVWT*GTTMLR
Trigger: TCTAAGCATAGTTGTTCCCAAGGTCCACACGTGTGG...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATGGATGGCCACCGAATaGAGGATGTTCCCATTGCTT +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKWMATE*RMFPLL
Trigger: AAGCAATGGGAACATCCTCAATTCGGTGGCCATCCA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTATTGTATGGAATGTGTTaGCTGCCATTGACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVLYGMC*LPLTRA
Trigger: GGCTCTCGTCAATGGCAGCAAACACATTCCATACAA...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGCGAGCTTGCTCTCTTaGTATGGAATGTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKASLLS*YGMCLL
Trigger: CAGCAAACACATTCCATACAAAGAGAGCAAGCTCGC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTAATTCACTGAGCCACTaGTTGGGATCCAGCATCAGA +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISNSLSH*LGSSIR
Trigger: TCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAACTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCTTCATCCTCATTCATaGTCTTTGATGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTLHPHS*SLMPQH
Trigger: GTGCTGGGGCATCAAAGACAATGAATGAGGATGAAG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAACGCAAACTGTGGATTaGTGGGTCAAGGAACCACAT +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKTQTVD*WVKEPH
Trigger: ATGTGGTTCCTTGACCCACAAATCCACAGTTTGCGT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAGGAGAGCTGAAATCCTaGTACTCTGGACAACAGACA +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKGELKS*YSGQQT
Trigger: TGTCTGTTGTCCAGAGTACAAGGATTTCAGCTCTCC...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp TCTCCCGGATTAGAATTACGCTTGCATTATGATGGAAATAATGAACAGGTTGTAGAAGATATGCTGCATTaGAGGGCAAAAGGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: SPGLELRLHYDGNNEQVVEDMLH*RAKGKR
Trigger: ACGCTTCCCTTTTGCCCTCAAATGCAGCATATCTTC...TACAACCTGTTCATTATTTCCATCATAATGCAAGCGTAATTCTAATCCGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCGCTGGGGCTGAGTTGTaGGTTAATAAAGACAGCCTA +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTAGAEL*VNKDSL
Trigger: TAGGCTGTCTTTATTAACCAACAACTCAGCCCCAGC...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGGGGAAGGAGTCTGACTaGCTAAGAGAACTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKGKESD*LRELLV
Trigger: AACCAAGAGTTCTCTTAGCAAGTCAGACTCCTTCCC...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCCAGCTTTGTTTCATTaGGTGCAGAGAAAAGTGGGC +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKPALFH*VQRKVG
Trigger: GCCCACTTTTCTCTGCACCAAATGAAACAAAGCTGG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTTATACCACTTTCTCTaGATGCTCTCCCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISLYHFL*MLSQKG
Trigger: GCCCTTCTGGGAGAGCATCAAGAGAAAGTGGTATAA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCCCTCCTTCTCGATTTTaGCTAAGAGCTTTCACACAG +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTPPSRF*LRAFTQ
Trigger: CTGTGTGAAAGCTCTTAGCAAAAATCGAGAAGGAGG...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ACATACATTACTAATCATGGAATTAGAGATCCAGAGCTTGAAGGAACCACAAAGCTCCTGTTTGCACCTTaGCATAGAAGCAGACTCTTA +
Preference number: 5 (lower is better)
Translates to: TYITNHGIRDPELEGTTKLLFAP*HRSRLL
Trigger: TAAGAGTCTGCTTCTATGCAAAGGTGCAAACAGGAG...CTTTGTGGTTCCTTCAAGCTCTGGATCTCTAATTCCATGATTAGTAATGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTTGTTACCCACCAATGTaGACAGATACTTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISCYPPM*TDTFWR
Trigger: CCTCCAGAAAGTATCTGTCAACATTGGTGGGTAACA...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AAAACAGGTACTATATATATCCAAGCTAAGGAACTCCAATTGCTTTCCCAAACCAATTTGCAGAAAGGGTaGGGGTCGCTGGTTTATTCT +
Preference number: 5 (lower is better)
Translates to: KTGTIYIQAKELQLLSQTNLQKG*GSLVYS
Trigger: AGAATAAACCAGCGACCCCAACCCTTTCTGCAAATT...GGTTTGGGAAAGCAATTGGAGTTCCTTAGCTTGGATATATATAGTACCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAAATCAGTCATTCTGGGTaGTTTTGTGTTCGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKISHSG*FCVRFP
Trigger: TGGAAAGCGAACACAAAACAACCCAGAATGACTGAT...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTGTTTCCTTCCGCCTTTaGTTACAGCATAAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISVSFRL*LQHKVA
Trigger: AGCAACTTTATGCTGTAACAAAAGGCGGAAGGAAAC...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp ATTTATAGGCAGAGACAGGAACAAGCACATCATAACGTAAAATGCCTGATTTCTACGGCTGTGTTTGCATaGAACAAATCTGCAGATTTG +
Preference number: 5 (lower is better)
Translates to: IYRQRQEQAHHNVKCLISTAVFA*NKSADL
Trigger: CAAATCTGCAGATTTGTTCAATGCAAACACAGCCGT...AGAAATCAGGCATTTTACGTTATGATGTGCTTGTTCCTGTCTCTGCCTATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS-3UTR CAA 90 bp AATATGGCTCTGGTGAATTGGTTCCAGCTTTCGTTCAAGACTTTTTGGAATAAATTAGAGATCCAGAGCTaGAAGGAACCACAAAGATCA +
Preference number: 5 (lower is better)
Translates to: NMALVNWFQLSFKTFWNKLEIQS*KEPQRS
Trigger: TGATCTTTGTGGTTCCTTCAAGCTCTGGATCTCTAA...TTTATTCCAAAAAGTCTTGAACGAAAGCTGGAACCAATTCACCAGAGCCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp CTCCCCGCGCGGGGCATGGTGCCGTCCTTGCCCGCGTaGAGCCGGGAGCTCACGGAGGACAGGCTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LPARGMVPSLPA*SRELTEDRLSA
Trigger: GGCCGAGAGCCTGTCCTCCGTGAGCTCCCGGCTGCACGCGGGCAAGGACGGCACCATGCCCCGCGCGGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp CCGAGGAGCCGAGCGCTGAGCCCGCGCCCTCAGGAGTaGGCCGGCTGCCGGCGCGCGACTCCTCGTATGCTT +
Preference number: 6 (lower is better)
Translates to: PRSRALSPRPQE*AGCRRATPRML
Trigger: AAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCTGAGGGCGCGGGCTCAGCGCTCGGCTCCTCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp GCTGGAGCCCACCCACGTGCCGGGACCCCACCAGGGTaGGGATGTTGGAGAGCGGTGGCGGGGAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: AGAHPRAGTPPG*GCWRAVAGSRA
Trigger: CGCCCTGCTCCCCGCCACCGCTCTCCAACATCCCCACCCTGGTGGGGTCCCGGCACGTGGGTGGGCTCCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS GCA 72 bp TCTGCACGAGTGGGGAGGCGCTGTGCTGGCTACTGCTaGCCGGGACGCTCCTGGGTGAGGCCGGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: SARVGRRCAGYC*PGRSWVRPGWG
Trigger: GCCCCAGCCCGGCCTCACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACTCGTGCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTGCTGGTaGCGCTGCCGCTGGCACTGTGCTGAGGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PGRRLVGSGGCW*RCRWHCAEGWP
Trigger: GGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp CGAGCGCTGAGCCCGCGCCCTCAGGAGTGGGCCGGCTaGCGGCGCGCGACTCCTCGTATGCTTTCCGGTACC +
Preference number: 6 (lower is better)
Translates to: RALSPRPQEWAG*RRATPRMLSGT
Trigger: GGTACCGGAAAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCTGAGGGCGCGGGCTCAGCGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp CCGCCGGGAAGGCGGCTGGTTGGTTCAGGGGGCTGCTaGTGCCGCTGCCGCTGGCACTGTGCTGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PPGRRLVGSGGC*CRCRWHCAEGW
Trigger: CCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp GCTAGGCTCGTCTGGGAGGCCCGCCGGGAAGGCGGCTaGTTGGTTCAGGGGGCTGCTGGTGCCGCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: ARLVWEARREGG*LVQGAAGAAAA
Trigger: AGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAGCCGCCTTCCCGGCGGGCCTCCCAGACGAGCCTAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 72 bp GGCCCACCGCCTGCGGCAGGGACTTGGTGGAGAAGCTaGGGGTTTTGGTGGTGGAGGCGGACGGGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: GPPPAAGTWWRS*GFWWWRRTGRA
Trigger: CGCGCGGCCCGTCCGCCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGTCCCTGCCGCAGGCGGTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp ACGGGCCGCGCGCTCTGGGGCTGGCCAGGAGGAGTCTaGTCACGGCGGAGATCTTGGACTGGCCGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: TGRALWGWPGGV*SRRRSWTGRPW
Trigger: CCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCGGCCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp AGGCTGGGGCTCTGCACGAGTGGGGAGGCGCTGTGCTaGCTACTGCTGCCCGGGACGCTCCTGGGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: RLGLCTSGEALC*LLLPGTLLGEA
Trigger: GGCCTCACCCAGGAGCGTCCCGGGCAGCAGTAGCCAGCACAGCGCCTCCCCACTCGTGCAGAGCCCCAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp GGCTGGCCAGGAGGAGTCTGCTCACGGCGGAGATCTTaGACTGGCCGGCCTTGGGCGAGGCCCCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GWPGGVCSRRRS*TGRPWARPRSW
Trigger: CCAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp TGGTGGTGGAGGCGGACGGGCCGCGCGCTCTGGGGCTaGCCAGGAGGAGTCTGCTCACGGCGGAGATCTTGG +
Preference number: 6 (lower is better)
Translates to: WWWRRTGRALWG*PGGVCSRRRSW
Trigger: CCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCAGCCCCAGAGCGCGCGGCCCGTCCGCCTCCACCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp GGGCTGGCCAGGAGGAGTCTGCTCACGGCGGAGATCTaGGACTGGCCGGCCTTGGGCGAGGCCCCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GLARRSLLTAEI*DWPALGEAPEL
Trigger: CAGCTCCGGGGCCTCGCCCAAGGCCGGCCAGTCCAAGATCTCCGCCGTGAGCAGACTCCTCCTGGCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp TCCTCACAGAGGTACACGCCCGGGGACTGGCCGTCCTaGAGGCTGCCCGTGGCCACCTCCGACAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSQRYTPGDWPS*RLPVATSDSRS
Trigger: GGACCTGCTGTCGGAGGTGGCCACGGGCAGCCTGCAGGACGGCCAGTCCCCGGGCGTGTACCTCTGTGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CCCGGGAAGGGCCCCGGGAGGAGCAACCTCAGGGCCTaGCTCTTGAGCTCCACCAGGCGGGCGTTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: PGKGPGRSNLRA*LLSSTRRALQF
Trigger: GAACTGCAACGCCCGCCTGGTGGAGCTCAAGAGGCAGGCCCTGAGGTTGCTCCTCCCGGGGCCCTTCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp CAGATGGGGTCCTCACAGAGGTACACGCCCGGGGACTaGCCGTCCTGCAGGCTGCCCGTGGCCACCTCCGAC +
Preference number: 6 (lower is better)
Translates to: QMGSSQRYTPGD*PSCRLPVATSD
Trigger: GTCGGAGGTGGCCACGGGCAGCCTGCAGGACGGCCAGTCCCCGGGCGTGTACCTCTGTGAGGACCCCATCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp AGGAGCAACCTCAGGGCCTGCCTCTTGAGCTCCACCAGGCGGGCGTaGCAGTTCTCGCACCAGACGCCGCGGTCCGAGCCGGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RSNLRACLLSSTRRA*QFSHQTPRSEPGEE
Trigger: CTCCTCCCCCGGCTCGGACCGCGGCGTCTGGTGCGAGAACTGCAACGCCCGCCTGGTGGAGCTCAAGAGGCAGGCCCTGAGGTTGCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CAA 90 bp TTGCCCGGGAAGGGCCCCGGGAGGAGCAACCTCAGGGCCTGCCTCTaGAGCTCCACCAGGCGGGCGTTGCAGTTCTCGCACCAGACGCCG +
Preference number: 6 (lower is better)
Translates to: LPGKGPGRSNLRACL*SSTRRALQFSHQTP
Trigger: CGGCGTCTGGTGCGAGAACTGCAACGCCCGCCTGGTGGAGCTCAAGAGGCAGGCCCTGAGGTTGCTCCTCCCGGGGCCCTTCCCGGGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CAA 90 bp ACCTCGGGCTGCAGCAAGGACTCCCTAGACGCCACGCCGGAATCCTaGCTCGAGGGAGGCAGTGGGGCGGGAGACGGCAGGACCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TSGCSKDSLDATPES*LEGGSGAGDGRTPF
Trigger: GAAGGGGGTCCTGCCGTCTCCCGCCCCACTGCCTCCCTCGAGCAAGGATTCCGGCGTGGCGTCTAGGGAGTCCTTGCTGCAGCCCGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp AGGAGTGGGCCGGCTGCCGGCGCGCGACTCCTCGTATaGTTTCCGGTACCAGCTTTCCGGGGAGAAGGGCGC +
Preference number: 6 (lower is better)
Translates to: RSGPAAGARLLV*FPVPAFRGEGR
Trigger: GCGCCCTTCTCCCCGGAAAGCTGGTACCGGAAAGCATACGAGGAGTCGCGCGCCGGCAGCCGGCCCACTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp GCGATGGGGAAGTCAGGGTCCACCGTGGCCCTGGTGTaGAAGGGTCTCAGCTGGGTGGGCCTGCGCATGCGG +
Preference number: 6 (lower is better)
Translates to: AMGKSGSTVALV*KGLSWVGLRMR
Trigger: CCGCATGCGCAGGCCCACCCAGCTGAGACCCTTCCACACCAGGGCCACGGTGGACCCTGACTTCCCCATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp AGGAGGCGGCCACCGATGTGCCTGTGGAAGTCTCGCTaGCCACGCAGGAGCCCTGCGAGGCTGGGACACTGC +
Preference number: 6 (lower is better)
Translates to: RRRPPMCLWKSR*PRRSPARLGHC
Trigger: GCAGTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp GGGCTCATTCCAACCGGGGGCGTACGCACCTCGGGCTaGAGCAAGGACTCCCTAGACGCCACGCCGGAATCC +
Preference number: 6 (lower is better)
Translates to: GLIPTGGVRTSG*SKDSLDATPES
Trigger: GGATTCCGGCGTGGCGTCTAGGGAGTCCTTGCTGCAGCCCGAGGTGCGTACGCCCCCGGTTGGAATGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CCTCGCTGTCCCGCATCACGCTCTCGTAGCCGCTGCTaGCGCCGCTGTGGTAGAACAGGGCCGTCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: PRCPASRSRSRC*RRCGRTGPSSP
Trigger: TGGGGAAGACGGCCCTGTTCTACCACAGCGGCGGCAGCAGCGGCTACGAGAGCGTGATGCGGGACAGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp GTGGCGGGGAGCAGGGCGAGGCGTCGTAGTGCTCACTaGCGGCTGCCTGCTCCAACGTCAGCACCATCTGGA +
Preference number: 6 (lower is better)
Translates to: VAGSRARRRSAH*RLPAPTSAPSG
Trigger: TCCAGATGGTGCTGACGTTGGAGCAGGCAGCCGGCAGTGAGCACTACGACGCCTCGCCCTGCTCCCCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CCA 72 bp CCACCGTGGCCCTGGTGTGGAAGGGTCTCAGCTGGGTaGGCCTGCGCATGCGGCCTTCTTCGCAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: PPWPWCGRVSAG*ACACGLLRRSS
Trigger: AGAGCTCCTGCGAAGAAGGCCGCATGCGCAGGCCCACCCAGCTGAGACCCTTCCACACCAGGGCCACGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TGGAGGGCGGGGTGCCCGAGGCTGCACCCACCCCGTTaGTCTCAGCAGCGCAGTAATAGGAGAGGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: WRAGCPRLHPPR*SQQRSNRRGCP
Trigger: CGGACAGCCTCTCCTATTACTGCGCTGCTGAGACCAACGGGGTGGGTGCAGCCTCGGGCACCCCGCCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp CTGGTTGGTTCAGGGGGCTGCTGGTGCCGCTGCCGCTaGCACTGTGCTGAGGGCTGGCCCGGTTCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: LVGSGGCWCRCR*HCAEGWPGSSG
Trigger: ACCAGAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCAGCCCCCTGAACCAACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp GAGCTGGAGCCCTGGCCCACCGCCTGCGGCAGGGACTaGGTGGAGAAGCTGAGGGTTTTGGTGGTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: ELEPWPTACGRD*VEKLRVLVVEA
Trigger: CGCCTCCACCACCAAAACCCTCAGCTTCTCCACCAAGTCCCTGCCGCAGGCGGTGGGCCAGGGCTCCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp AAGGGCCCCGGGAGGAGCAACCTCAGGGCCTGCCTCTaGAGCTCCACCAGGCGGGCGTTGCAGTTCTCGCAC +
Preference number: 6 (lower is better)
Translates to: KGPGRSNLRACL*SSTRRALQFSH
Trigger: GTGCGAGAACTGCAACGCCCGCCTGGTGGAGCTCAAGAGGCAGGCCCTGAGGTTGCTCCTCCCGGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS TCA 72 bp GAAGCTTGGAGGCCAGGCCCGAGCTCCTGTTCCTGCTaGGGGACTGCGTGGACCAGGGCGTGTGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: EAWRPGPSSCSC*GTAWTRACASH
Trigger: GTGGGAAGCACACGCCCTGGTCCACGCAGTCCCTCAGCAGGAACAGGAGCTCGGGCCTGGCCTCCAAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp AGGAAAGCGAGGGATACAATCAGGGCTCGCGGCCGCTaGCGGGAAGGTGGGAGAGCCGAGCCGAGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: RKARDTIRARGR*REGGRAEPSQL
Trigger: CAGCTGACTCGGCTCGGCTCTCCCACCTTCCCGGCAGCGGCCGCGAGCCCTGATTGTATCCCTCGCTTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 72 bp TCCAGAAGGTCCTCCAACCCAGAAGCGTCCCCCGGCTaGAGGGGGCTGGCTCTCAGCCCTCAGGGCAAGGTT +
Preference number: 6 (lower is better)
Translates to: SRRSSNPEASPG*RGLALSPQGKV
Trigger: AACCTTGCCCTGAGGGCTGAGAGCCAGCCCCCTGCAGCCGGGGGACGCTTCTGGGTTGGAGGACCTTCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 72 bp GGAGCAGGGCGAGGCGTCGTAGTGCTCACTGCCGGCTaGCTGCTCCAACGTCAGCACCATCTGGATGGCCTC +
Preference number: 6 (lower is better)
Translates to: GAGRGVVVLTAG*LLQRQHHLDGL
Trigger: GAGGCCATCCAGATGGTGCTGACGTTGGAGCAGGCAGCCGGCAGTGAGCACTACGACGCCTCGCCCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS GCA 72 bp GGGCAGCTCGTGCAAAGAAGGAGGCGGCCACCGATGTaGCTGTGGAAGTCTCGCTGGCCACGCAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: GQLVQRRRRPPM*LWKSRWPRRSP
Trigger: AGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCTTCTTTGCACGAGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp TGGACAGGTGAGCGATGGGGAAGTCAGGGTCCACCGTaGCCCTGGTGTGGAAGGGTCTCAGCTGGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: WTGERWGSQGPP*PWCGRVSAGWA
Trigger: GGCCCACCCAGCTGAGACCCTTCCACACCAGGGCCACGGTGGACCCTGACTTCCCCATCGCTCACCTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TGCTGGTGCCGCTGCCGCTGGCACTGTGCTGAGGGCTaGCCCGGTTCTTCTGGTCCAGGCTGGACTTTCGGA +
Preference number: 6 (lower is better)
Translates to: CWCRCRWHCAEG*PGSSGPGWTFG
Trigger: TCCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAGCCCTCAGCACAGTGCCAGCGGCAGCGGCACCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp CTCGTGCAAAGAAGGAGGCGGCCACCGATGTGCCTGTaGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: LVQRRRRPPMCL*KSRWPRRSPAR
Trigger: CCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCCACAGGCACATCGGTGGCCGCCTCCTTCTTTGCACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS CAA 90 bp TGCAGCTCGGCAAACGTGTTGCACTTCAGGCAGTCCCTTTCTGACTaGCCGGCTGCAGCCTCTCCTGCCTCTGCGGGCCGGCTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: CSSANVLHFRQSLSD*PAAASPASAGRLSP
Trigger: GGGCGACAGCCGGCCCGCAGAGGCAGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACTGCCTGAAGTGCAACACGTTTGCCGAGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp GGCTTGCCCCCGCTGCTTGGCTTAACCGGGGGCCTCTaGTTGCCTGCTCTGGCCCAAACTGAGCAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: GLPPLLGLTGGL*LPALAQTEQAV
Trigger: AACTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp GTCTCCCGGACTGGGCTTTCCGTCCTGCTCCTGCTCTaGTCTGGTCTCAGCATTCGAGGGGCCCGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: VSRTGLSVLLLL*SGLSIRGARGS
Trigger: ACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp AGCCTGTCTCCCGGACTGGGCTTTCCGTCCTGCTCCTaGTCTGCTCTGGTCTCAGCATTCGAGGGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SLSPGLGFPSCS*SALVSAFEGPV
Trigger: CACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp CTGGGAAGGCTGCTGGACTTGACGCTTTTGTTGGGATaGACGGGGCTCTGGGTGGCCAAACCGGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LGRLLDLTLLLG*TGLWVAKPGRA
Trigger: GGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp CCGGACTGGGCTTTCCGTCCTGCTCCTGCTCTGCTCTaGTCTCAGCATTCGAGGGGCCCGTGGCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: PDWAFRPAPALL*SQHSRGPWQSH
Trigger: GTGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp TGTGCTGAGGGCTGGCCCGGTTCTTCTGGTCCAGGCTaGACTTTCGGACAGGGGGCAGAGGGGGAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: CAEGWPGSSGPG*TFGQGAEGESL
Trigger: AAGGGACTCCCCCTCTGCCCCCTGTCCGAAAGTCCAGCCTGGACCAGAAGAACCGGGCCAGCCCTCAGCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp GGATACAATCAGGGCTCGCGGCCGCTGCCGGGAAGGTaGGAGAGCCGAGCCGAGTCAGCTGTGGGAACTTGT +
Preference number: 6 (lower is better)
Translates to: GYNQGSRPLPGR*ESRAESAVGTC
Trigger: ACAAGTTCCCACAGCTGACTCGGCTCGGCTCTCCCACCTTCCCGGCAGCGGCCGCGAGCCCTGATTGTATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 72 bp GGCTCCTCGCTGCCGTCGATGCAGTCCAGCCTCTCCTaGAGCTCGGCAAACGTGTTGCACTTCAGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: GSSLPSMQSSLS*SSANVLHFRQS
Trigger: GGACTGCCTGAAGTGCAACACGTTTGCCGAGCTGCAGGAGAGGCTGGACTGCATCGACGGCAGCGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CTGCTGAGCCTGTCTCCCGGACTGGGCTTTCCGTCCTaGTCCTGCTCTGCTCTGGTCTCAGCATTCGAGGGG +
Preference number: 6 (lower is better)
Translates to: LLSLSPGLGFPS*SCSALVSAFEG
Trigger: CCCCTCGAATGCTGAGACCAGAGCAGAGCAGGAGCAGGACGGAAAGCCCAGTCCGGGAGACAGGCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp AGCTCCCGACCGCGGCCGAGATGTGCGCGATCATGGTaGTACGGCAGTTCATGTTCCCCAGAGACTCCCGCA +
Preference number: 6 (lower is better)
Translates to: SSRPRPRCARSW*YGSSCSPETPA
Trigger: TGCGGGAGTCTCTGGGGAACATGAACTGCCGTACCACCATGATCGCGCACATCTCGGCCGCGGTCGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CGTAGCTCCCGACCGCGGCCGAGATGTGCGCGATCATaGTGGTACGGCAGTTCATGTTCCCCAGAGACTCCC +
Preference number: 6 (lower is better)
Translates to: RSSRPRPRCARS*WYGSSCSPETP
Trigger: GGGAGTCTCTGGGGAACATGAACTGCCGTACCACCATGATCGCGCACATCTCGGCCGCGGTCGGGAGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp AGTCCTGGGGAGCGGGGGACCACTAGGACAAGGGTCTaGCTCATCTACCGGCGCCTGGAGGTGATGTCGAAG +
Preference number: 6 (lower is better)
Translates to: SPGERGTTRTRV*LIYRRLEVMSK
Trigger: CTTCGACATCACCTCCAGGCGCCGGTAGATGAGCCAGACCCTTGTCCTAGTGGTCCCCCGCTCCCCAGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp GGAAGTCTCGCTGGCCACGCAGGAGCCCTGCGAGGCTaGGACACTGCAGGCGGAAGGCTTGTCTGCATTGTA +
Preference number: 6 (lower is better)
Translates to: GSLAGHAGALRG*DTAGGRLVCIV
Trigger: TACAATGCAGACAAGCCTTCCGCCTGCAGTGTCCCAGCCTCGCAGGGCTCCTGCGTGGCCAGCGAGACTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp GCAAACGTGTTGCACTTCAGGCAGTCCCTTTCTGACTaGCCGGCTGCAGCCTCTCCTGCCTCTGCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: ANVLHFRQSLSD*PAAASPASAGR
Trigger: CCGGCCCGCAGAGGCAGGAGAGGCTGCAGCCGGCAAGTCAGAAAGGGACTGCCTGAAGTGCAACACGTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS TCA 72 bp CGTGGCCGAAACAGAACACGCAGCCATCTGCCCCGTTaGCCACAGACTGGATCACCTCTGCCACGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: RGRNRTRSHLPR*PQTGSPLPRCL
Trigger: CAGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTCTGTTTCGGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS TCA 72 bp TCTGAGAACCTGGATTGGAGCGTTTCTTCGGGGTCTTaGGGCTCCGGCACCTGCCGCCCACGGAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SENLDWSVSSGS*GSGTCRPRSCC
Trigger: ACAGCAGCTCCGTGGGCGGCAGGTGCCGGAGCCTCAAGACCCCGAAGAAACGCTCCAATCCAGGTTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 72 bp CAGCCGCCGAGTCTTCTAACCGGCCCCTGCCACGTGTaGCAAGAGCTTCGGAGTCCTGGTATGGGTACAGGG +
Preference number: 6 (lower is better)
Translates to: QPPSLLTGPCHV*QELRSPGMGTG
Trigger: CCCTGTACCCATACCAGGACTCCGAAGCTCTTGTCACACGTGGCAGGGGCCGGTTAGAAGACTCGGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS GCA 72 bp GACACGGCTCTCCAGGCGCTCCGTCACACACTCCAGTaGCTCCAGGTACTCCAGGGAATCCAGCTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: DTALQALRHTLQ*LQVLQGIQLPN
Trigger: GTTTGGGAGCTGGATTCCCTGGAGTACCTGGAGGCACTGGAGTGTGTGACGGAGCGCCTGGAGAGCCGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp TGTGAGTTGCGGTGGTCGTCCTCATCACAGTCCTGTTaGTGGCTCCTGCGGGAGGCAATGGCGGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: CELRWSSSSQSC*WLLREAMAASR
Trigger: CCTGGATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAGGACGACCACCGCAACTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TTATCAGACTCAGAGAGTGGGCTTGCCCCCGCTGCTTaGCTTAACCGGGGGCCTCTGCTTGCCTGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: LSDSESGLAPAA*LNRGPLLACSG
Trigger: GCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTGAGTCTGATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CCGCGGCGGGCACAGGTGAGTGACTCCTCTGCATCTTaGAGGCTGGGAGTTCAGGGCCTTCTCTGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: PRRAQVSDSSAS*RLGVQGLLCWS
Trigger: TGACCAACAGAGAAGGCCCTGAACTCCCAGCCTCCAAGATGCAGAGGAGTCACTCACCTGTGCCCGCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CTGGACTTGACGCTTTTGTTGGGATGCACGGGGCTCTaGGTGGCCAAACCGGGCAGGGCCATCTCACACCCA +
Preference number: 6 (lower is better)
Translates to: LDLTLLLGCTGL*VAKPGRAISHP
Trigger: TGGGTGTGAGATGGCCCTGCCCGGTTTGGCCACCCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp AGTAATAGGAGAGGCTGTCCGGCTCCTCCTGCCGGCTaGCCTTCTGAAAGGCCCTGGGAAGGCTGCTGGACT +
Preference number: 6 (lower is better)
Translates to: SNRRGCPAPPAG*PSERPWEGCWT
Trigger: AGTCCAGCAGCCTTCCCAGGGCCTTTCAGAAGGCCAGCCGGCAGGAGGAGCCGGACAGCCTCTCCTATTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp GCGTGGCCGAAACAGAACACGCAGCCATCTGCCCCGTaGACCACAGACTGGATCACCTCTGCCACGGTGCCT +
Preference number: 6 (lower is better)
Translates to: AWPKQNTQPSAP*TTDWITSATVP
Trigger: AGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTCTGTTTCGGCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp TTGCCCCCGCTGCTTGGCTTAACCGGGGGCCTCTGCTaGCCTGCTCTGGCCCAAACTGAGCAGGCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: LPPLLGLTGGLC*PALAQTEQAVL
Trigger: AAGAACTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp AGAGTGGGCTTGCCCCCGCTGCTTGGCTTAACCGGGGGCCTCTGCTaGCCTGCTCTGGCCCAAACTGAGCAGGCAGTTCTTCGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: RVGLPPLLGLTGGLC*PALAQTEQAVLRKE
Trigger: TTCCTTTCGAAGAACTGCCTGCTCAGTTTGGGCCAGAGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAGCCCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS TCA 72 bp CTCCTTCCCCCACACTTCCACGGCGGAAACCCGGACTaGGAAACGGGCGCCGGTCTTTTCCTTGCGTTCGTT +
Preference number: 6 (lower is better)
Translates to: LLPPHFHGGNPD*ETGAGLFLAFV
Trigger: AACGAACGCAAGGAAAAGACCGGCGCCCGTTTCTCAGTCCGGGTTTCCGCCGTGGAAGTGTGGGGGAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS TCA 72 bp CCATTGCCTCCCCGTGCCCAAAACACGTCTGGGCTATaGAACTGTGGCACGACTGCTCACCCTCACTGCCCG +
Preference number: 6 (lower is better)
Translates to: PLPPRAQNTSGL*NCGTTAHPHCP
Trigger: CGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS TCA 72 bp TGGCCTTCTGAAAGGCCCTGGGAAGGCTGCTGGACTTaGCGCTTTTGTTGGGATGCACGGGGCTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: WPSERPWEGCWT*RFCWDARGSGW
Trigger: CCACCCAGAGCCCCGTGCATCCCAACAAAAGCGTCAAGTCCAGCAGCCTTCCCAGGGCCTTTCAGAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS TCA 72 bp GCCTTCCGGATGGTGTTGGGGACCTGGAGTTTGTCGTaGATCACAGCCGAGAAAGCAGGGTCCTTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: AFRMVLGTWSLS*ITAEKAGSLPG
Trigger: CCCGGGCAAGGACCCTGCTTTCTCGGCTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 72 bp GCCATCTGCCCCGTTGACCACAGACTGGATCACCTCTaGCACGGTGCCTGCACACACTTCAGCCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: AICPVDHRLDHL*HGACTHFSLRS
Trigger: GCTTCTCAGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp GCCCAAACTGAGCAGGCAGTTCTTCGAAAGGAAAGCTaGTGGGCTCCTCGCTGCCGTCGATGCAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: AQTEQAVLRKES*WAPRCRRCSPA
Trigger: GGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAGAACTGCCTGCTCAGTTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CATCACAGTCCTGTTGGTGGCTCCTGCGGGAGGCAATaGCGGCATCCAGGAAAAAGGCAGCCTTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: HHSPVGGSCGRQ*RHPGKRQPSLR
Trigger: CCGCAGAGAAGGCTGCCTTTTTCCTGGATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp GAGTTGCGGTGGTCGTCCTCATCACAGTCCTGTTGGTaGCTCCTGCGGGAGGCAATGGCGGCATCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: ELRWSSSSQSCW*LLREAMAASRK
Trigger: TTTCCTGGATGCCGCCATTGCCTCCCGCAGGAGCCACCAACAGGACTGTGATGAGGACGACCACCGCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TCTTCATCCTCAAGACTCTCGATGCAATCTGGATGGTaGACAGGGTCTCCGCGTAGCTCCCGACCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SSSSRLSMQSGW*TGSPRSSRPRP
Trigger: CGGCCGCGGTCGGGAGCTACGCGGAGACCCTGTCCACCATCCAGATTGCATCGAGAGTCTTGAGGATGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TCCCCGTGCCCAAAACACGTCTGGGCTATGAAACTGTaGCACGACTGCTCACCCTCACTGCCCGCGCTCATC +
Preference number: 6 (lower is better)
Translates to: SPCPKHVWAMKL*HDCSPSLPALI
Trigger: GATGAGCGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGGGCACGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CCA 72 bp ACCAGCTTTCCGGGGAGAAGGGCGCTGCGGGCTTGGTaGGCGAGCAGACTTCATTCACCCCGTATTTCTTGC +
Preference number: 6 (lower is better)
Translates to: TSFPGRRALRAW*ASRLHSPRISC
Trigger: GCAAGAAATACGGGGTGAATGAAGTCTGCTCGCCCACCAAGCCCGCAGCGCCCTTCTCCCCGGAAAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp GGTACCAGCTTTCCGGGGAGAAGGGCGCTGCGGGCTTaGTGGGCGAGCAGACTTCATTCACCCCGTATTTCT +
Preference number: 6 (lower is better)
Translates to: GTSFPGRRALRA*WASRLHSPRIS
Trigger: AGAAATACGGGGTGAATGAAGTCTGCTCGCCCACCAAGCCCGCAGCGCCCTTCTCCCCGGAAAGCTGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS GCA 72 bp GGGAGGGGAGGTCTGCAGAATCCCACTGAAGCTGGTTaGAAAGAGCGGTGGTTCGGCAGCGGAAGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: GRGGLQNPTEAG*KERWFGSGRSG
Trigger: TCCACTTCTTCCGCTGCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAGACCTCCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CAGTTTGGCGTGGCCGAAACAGAACACGCAGCCATCTaGCCCGTTGACCACAGACTGGATCACCTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: QFGVAETEHAAI*PVDHRLDHLCH
Trigger: GTGGCAGAGGTGATCCAGTCTGTGGTCAACGGGGCAGATGGCTGCGTGTTCTGTTTCGGCCACGCCAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp CCAAAACACGTCTGGGCTATGAAACTGTGGCACGACTaGTCACCCTCACTGCCCGCGCTCATCTCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PKHVWAMKLWHD*SPSLPALISLS
Trigger: GCTGAGCGAGATGAGCGCGGGCAGTGAGGGTGAGCAGTCGTGCCACAGTTTCATAGCCCAGACGTGTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 72 bp GGCGCAAATGTCACAGCGGTTGTCCCGGTCGTTCCATaGCTTCCGGATGGTGTTGGGGACCTGGAGTTTGTC +
Preference number: 6 (lower is better)
Translates to: GANVTAVVPVVP*LPDGVGDLEFV
Trigger: GACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACCGCTGTGACATTTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CAA 90 bp GACCTTCGGACCCATTATCTTCCTTATCAGACTCAGAGAGTGGGCTaGCCCCCGCTGCTTGGCTTAACCGGGGGCCTCTGCTTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: DLRTHYLPYQTQRVG*PPLLGLTGGLCLPA
Trigger: AGCAGGCAAGCAGAGGCCCCCGGTTAAGCCAAGCAGCGGGGGCAAGCCCACTCTCTGAGTCTGATAAGGAAGATAATGGGTCCGAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp TCATCTCCCATCTCAGACAGGATGAGCAAGTTGTCGGGGCTGGCCTaGGGCTTCTCTCTGCACACCACAGCGGTGTTCTGGAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSPISDRMSKLSGLA*GFSLHTTAVFWRLL
Trigger: CAGCAGCCTCCAGAACACCGCTGTGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACAACTTGCTCATCCTGTCTGAGATGGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS TCA 72 bp ACCATCTGGATGGCCTCCTGCTTCAACTGGTTCAGGTaGGTGGCGCAAATGTCACAGCGGTTGTCCCGGTCG +
Preference number: 6 (lower is better)
Translates to: TIWMASCFNWFR*VAQMSQRLSRS
Trigger: CGACCGGGACAACCGCTGTGACATTTGCGCCACTCACCTGAACCAGTTGAAGCAGGAGGCCATCCAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS TCA 72 bp CTGTCATCAGCTGGGAGATCTGGTATGGGTACAGGGTaGCCCCGTTGGTTCTCGACAGGGACCAGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: LSSAGRSGMGTG*PRWFSTGTRCH
Trigger: ATGGCACCTGGTCCCTGTCGAGAACCAACGGGGTCACCCTGTACCCATACCAGATCTCCCAGCTGATGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407071.7
ENST00000629409.1
CDS TCA 72 bp GGATTGAGGGATTCGAGGGACCTTCTGTCGCCCATGTaGCGCAGATTTCCCCAGGCTCACTGCTGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: GLRDSRDLLSPM*RRFPQAHCWKA
Trigger: GGCTTTCCAGCAGTGAGCCTGGGGAAATCTGCGTCACATGGGCGACAGAAGGTCCCTCGAATCCCTCAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS GCA 72 bp GCTGCTGACAAACTCCGAGGCCACAGGTTCTGCCATTaGCTCCCCGTGCCCAAAACACGTCTGGGCTATGAA +
Preference number: 6 (lower is better)
Translates to: AADKLRGHRFCH*LPVPKTRLGYE
Trigger: TTCATAGCCCAGACGTGTTTTGGGCACGGGGAGGCAATGGCAGAACCTGTGGCCTCGGAGTTTGTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 72 bp AGCCACTCGTACTTCGCGCGGACCTCGGCGATCCTCTaGTGGCGGTGTTCCAGAATCTTCAGCTTTGCATTG +
Preference number: 6 (lower is better)
Translates to: SHSYFARTSAIL*WRCSRIFSFAL
Trigger: CAATGCAAAGCTGAAGATTCTGGAACACCGCCAGCAGAGGATCGCCGAGGTCCGCGCGAAGTACGAGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp TGTGGAGCCGCACCCTTGGTAGTGACAAGGTCTAGATaGTTCTCTGCCCGGGGAATGGCTCTGGCACTGATC +
Preference number: 6 (lower is better)
Translates to: CGAAPLVVTRSR*FSARGMALALI
Trigger: GATCAGTGCCAGAGCCATTCCCCGGGCAGAGAAGCATCTAGACCTTGTCACTACCAAGGGTGCGGCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CCA 72 bp CAAACTGAGCAGGCAGTTCTTCGAAAGGAAAGCTGCTaGGCTCCTCGCTGCCGTCGATGCAGTCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: QTEQAVLRKESC*APRCRRCSPAS
Trigger: AGAGGCTGGACTGCATCGACGGCAGCGAGGAGCCCAGCAGCTTTCCTTTCGAAGAACTGCCTGCTCAGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CGTTCAGCTCCAGTGGCTGCTGCACCGTCACCATCGTaGTGCTCAGGATCTCCTTCTTGGACTCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RSAPVAAAPSPS*CSGSPSWTLKE
Trigger: CTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCACCACGATGGTGACGGTGCAGCAGCCACTGGAGCTGAACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CCTGCTCTGCTCTGGTCTCAGCATTCGAGGGGCCCGTaGCAGTCTCACACCTCATCATCCCTTCTTCATTGG +
Preference number: 6 (lower is better)
Translates to: PALLWSQHSRGP*QSHTSSSLLHW
Trigger: CCAATGAAGAAGGGATGATGAGGTGTGAGACTGCCACGGGCCCCTCGAATGCTGAGACCAGAGCAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp CCGCACGTCCTCTTGTCACGGCCACATCCACAGAACTaGCATTTTCTTCAGCCAAGTCAGTCCGTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: PHVLLSRPHPQN*HFLQPSQSVLP
Trigger: GGGGAGCACGGACTGACTTGGCTGAAGAAAATGCCAGTTCTGTGGATGTGGCCGTGACAAGAGGACGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp GGTTGTCCCGGTCGTTCCATGCCTTCCGGATGGTGTTaGGGACCTGGAGTTTGTCGTGAATCACAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: GCPGRSMPSGWC*GPGVCRESQPR
Trigger: TCTCGGCTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CCA 72 bp CACAGCGGTTGTCCCGGTCGTTCCATGCCTTCCGGATaGTGTTGGGGACCTGGAGTTTGTCGTGAATCACAG +
Preference number: 6 (lower is better)
Translates to: HSGCPGRSMPSG*CWGPGVCRESQ
Trigger: CTGTGATTCACGACAAACTCCAGGTCCCCAACACCATCCGGAAGGCATGGAACGACCGGGACAACCGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CCA 72 bp TCTGGATGGCCTCCTGCTTCAACTGGTTCAGGTGAGTaGCGCAAATGTCACAGCGGTTGTCCCGGTCGTTCC +
Preference number: 6 (lower is better)
Translates to: SGWPPASTGSGE*RKCHSGCPGRS
Trigger: GGAACGACCGGGACAACCGCTGTGACATTTGCGCCACTCACCTGAACCAGTTGAAGCAGGAGGCCATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CCA 72 bp CTGGATGGCCACCGAATTGAGGATGTTCCCATTGCTTaGACTGGTGGCCATCTGGAGGCTGACCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: LDGHRIEDVPIA*TGGHLEADLGL
Trigger: CAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCCAAGCAATGGGAACATCCTCAATTCGGTGGCCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407071.7
ENST00000479506.1
ENST00000615502.2
ENST00000629409.1
CDS CAA 72 bp GGGATGTACCCCTCGCAGCTGCTCAGATTGGCCGTGTaGGAGATGGTGACCATGGCCTTGCTCACTGTGGAT +
Preference number: 6 (lower is better)
Translates to: GMYPSQLLRLAV*EMVTMALLTVD
Trigger: ATCCACAGTGAGCAAGGCCATGGTCACCATCTCCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CAA 72 bp GTCTTCATGGGGATGTACCCCTCGCAGCTGCTCAGATaGGCCGTGTTGGAGATGGTGACCATGGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: VFMGMYPSQLLR*AVLEMVTMALL
Trigger: GAGCAAGGCCATGGTCACCATCTCCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACATCCCCATGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CAA 90 bp TCCACGGCGGAAACCCGGACTGAGAAACGGGCGCCGGTCTTTTCCTaGCGTTCGTTTATGAGCTTGAAGAGCCAAGAGATGGCACAGGGA +
Preference number: 6 (lower is better)
Translates to: STAETRTEKRAPVFS*RSFMSLKSQEMAQG
Trigger: TCCCTGTGCCATCTCTTGGCTCTTCAAGCTCATAAACGAACGCAAGGAAAAGACCGGCGCCCGTTTCTCAGTCCGGGTTTCCGCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp AGTGGCTGCTGCACCGTCACCATCGTGGTGCTCAGGATCTCCTTCTaGGACTCTGAAGGAGTAGCTGCCTGCTGCTCATCATCGACAGGA +
Preference number: 6 (lower is better)
Translates to: SGCCTVTIVVLRISF*DSEGVAACCSSSTG
Trigger: TCCTGTCGATGATGAGCAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCACCACGATGGTGACGGTGCAGCAGCCACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS TCA 72 bp TGGAGATTATTACACAGTGGTGCGGGCCACGGGGATTaGGGGATTCGAGGGACCTTCTGTCGCCCATGTGAC +
Preference number: 6 (lower is better)
Translates to: WRLLHSGAGHGD*GIRGTFCRPCD
Trigger: GTCACATGGGCGACAGAAGGTCCCTCGAATCCCTCAATCCCCGTGGCCCGCACCACTGTGTAATAATCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS GCA 72 bp GATCCTCTGCTGGCGGTGTTCCAGAATCTTCAGCTTTaGATTGAAGCACATGGCCTCCTTGCTGGCACCCCC +
Preference number: 6 (lower is better)
Translates to: DPLLAVFQNLQL*IEAHGLLAGTP
Trigger: GGGGGTGCCAGCAAGGAGGCCATGTGCTTCAATGCAAAGCTGAAGATTCTGGAACACCGCCAGCAGAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CCA 72 bp TTTTCTTCATCCTCAAGACTCTCGATGCAATCTGGATaGTGGACAGGGTCTCCGCGTAGCTCCCGACCGCGG +
Preference number: 6 (lower is better)
Translates to: FSSSSRLSMQSG*WTGSPRSSRPR
Trigger: CCGCGGTCGGGAGCTACGCGGAGACCCTGTCCACCATCCAGATTGCATCGAGAGTCTTGAGGATGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp GGTGTAGACTTTGCATCTCTGGGAAGGAGAGCTGGGTaGCTTGTACTCCGAGGTCTTGGACAGGCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: GVDFASLGRRAG*LVLRGLGQAGD
Trigger: ATCGCCAGCCTGTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGAGATGCAAAGTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp TCTGGGTGTAGACTTTGCATCTCTGGGAAGGAGAGCTaGGTGGCTTGTACTCCGAGGTCTTGGACAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SGCRLCISGKES*VACTPRSWTGW
Trigger: CCAGCCTGTCCAAGACCTCGGAGTACAAGCCACCCAGCTCTCCTTCCCAGAGATGCAAAGTCTACACCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp AAGCAGGTGATCATCATGAGATGGGCCTTGCAGAAGTaGACACGGCTCTCCAGGCGCTCCGTCACACACTCC +
Preference number: 6 (lower is better)
Translates to: KQVIIMRWALQK*TRLSRRSVTHS
Trigger: GGAGTGTGTGACGGAGCGCCTGGAGAGCCGTGTCAACTTCTGCAAGGCCCATCTCATGATGATCACCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 90 bp GCTTTGTTGAAAGAGTCATCTCCCATCTCAGACAGGATGAGCAAGTaGTCGGGGCTGGCCTTGGGCTTCTCTCTGCACACCACAGCGGTG +
Preference number: 6 (lower is better)
Translates to: ALLKESSPISDRMSK*SGLALGFSLHTTAV
Trigger: CACCGCTGTGGTGTGCAGAGAGAAGCCCAAGGCCAGCCCCGACAACTTGCTCATCCTGTCTGAGATGGGAGATGACTCTTTCAACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS TCA 72 bp CCTCGCAGCTGCTCAGATTGGCCGTGTTGGAGATGGTaGCCATGGCCTTGCTCACTGTGGATATTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: PRSCSDWPCWRW*PWPCSLWIFCS
Trigger: GCTGCAAAATATCCACAGTGAGCAAGGCCATGGTCACCATCTCCAACACGGCCAATCTGAGCAGCTGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 72 bp GTTGACCACAGACTGGATCACCTCTGCCACGGTGCCTaGACACACTTCAGCCTGAGAAGCGTCTTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: VDHRLDHLCHGA*THFSLRSVLWK
Trigger: TTTCCACAAGACGCTTCTCAGGCTGAAGTGTGTGCAGGCACCGTGGCAGAGGTGATCCAGTCTGTGGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp CTGCAGAATCCCACTGAAGCTGGTTGCAAAGAGCGGTaGTTCGGCAGCGGAAGAAGTGGAAGGCCGATGTTT +
Preference number: 6 (lower is better)
Translates to: LQNPTEAGCKER*FGSGRSGRPMF
Trigger: AAACATCGGCCTTCCACTTCTTCCGCTGCCGAACCACCGCTCTTTGCAACCAGCTTCAGTGGGATTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp TGCACCGTCACCATCGTGGTGCTCAGGATCTCCTTCTaGGACTCTGAAGGAGTAGCTGCCTGCTGCTCATCA +
Preference number: 6 (lower is better)
Translates to: CTVTIVVLRISF*DSEGVAACCSS
Trigger: TGATGAGCAGCAGGCAGCTACTCCTTCAGAGTCCAAGAAGGAGATCCTGAGCACCACGATGGTGACGGTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp TCGCAGCTGCTCAGATTGGCCGTGTTGGAGATGGTGACCATGGCCTaGCTCACTGTGGATATTTTGCAGCCTTTGATGGGGGCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: SQLLRLAVLEMVTMA*LTVDILQPLMGAAL
Trigger: CAAAGCAGCCCCCATCAAAGGCTGCAAAATATCCACAGTGAGCAAGGCCATGGTCACCATCTCCAACACGGCCAATCTGAGCAGCTGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CAA 90 bp GTGATATTGGTCTTCATGGGGATGTACCCCTCGCAGCTGCTCAGATaGGCCGTGTTGGAGATGGTGACCATGGCCTTGCTCACTGTGGAT +
Preference number: 6 (lower is better)
Translates to: VILVFMGMYPSQLLR*AVLEMVTMALLTVD
Trigger: ATCCACAGTGAGCAAGGCCATGGTCACCATCTCCAACACGGCCAATCTGAGCAGCTGCGAGGGGTACATCCCCATGAAGACCAATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS GCA 72 bp GCCTCCAGGTACTCCAGGGAATCCAGCTCCCAAACCTaGTCCAAGTCAAATTCACTGAGCCACTTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: ASRYSRESSSQT*SKSNSLSHLLG
Trigger: TCCCAACAAGTGGCTCAGTGAATTTGACTTGGAGCAGGTTTGGGAGCTGGATTCCCTGGAGTACCTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS GCA 72 bp CACAGAACTGGCATTTTCTTCAGCCAAGTCAGTCCGTaGTCCCCCACGAGGAAAGCGAGGGATACAATCAGG +
Preference number: 6 (lower is better)
Translates to: HRTGIFFSQVSP*SPTRKARDTIR
Trigger: CCTGATTGTATCCCTCGCTTTCCTCGTGGGGGAGCACGGACTGACTTGGCTGAAGAAAATGCCAGTTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp AGCAGACTTCATTCACCCCGTATTTCTTGCCCCTGGTaGAGACCGCAAGCCTCTCTTTATTCCCAGCTACCG +
Preference number: 6 (lower is better)
Translates to: SRLHSPRISCPW*RPQASLYSQLP
Trigger: CGGTAGCTGGGAATAAAGAGAGGCTTGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAATGAAGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CAA 90 bp TCAAATTCACTGAGCCACTTGTTGGGATCCAGCATCAGATACTGTTaGGTCGCCTCCAGCTCCTTCATCAGCCACTCGTACTTCGCGCGG +
Preference number: 6 (lower is better)
Translates to: SNSLSHLLGSSIRYC*VASSSFISHSYFAR
Trigger: CCGCGCGAAGTACGAGTGGCTGATGAAGGAGCTGGAGGCGACCAAACAGTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 90 bp TCCCCAGGCTCACTGCTGGAAAGCCTGTCCGCATCGTTTTCATCCTaGCGACGTCTAAATTGCAGAAAGGCAGAGTCGTCTTCTCCCTCA +
Preference number: 6 (lower is better)
Translates to: SPGSLLESLSASFSS*RRLNCRKAESSSPS
Trigger: TGAGGGAGAAGACGACTCTGCCTTTCTGCAATTTAGACGTCGCAAGGATGAAAACGATGCGGACAGGCTTTCCAGCAGTGAGCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS TCA 72 bp GAGGCTGGGAGTTCAGGGCCTTCTCTGTTGGTCAGCTaGCCTTCGGACCCATTATCTTCCTTATCAGACTCA +
Preference number: 6 (lower is better)
Translates to: EAGSSGPSLLVS*PSDPLSSLSDS
Trigger: TGAGTCTGATAAGGAAGATAATGGGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTGAACTCCCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp TTCCTACTGCAACCTTTGGAGATTATTACACAGTGGTaGGGGCCACGGGGATTGAGGGATTCGAGGGACCTT +
Preference number: 6 (lower is better)
Translates to: FLLQPLEIITQW*GPRGLRDSRDL
Trigger: AAGGTCCCTCGAATCCCTCAATCCCCGTGGCCCGCACCACTGTGTAATAATCTCCAAAGGTTGCAGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CCA 72 bp GGCAGTTCATGTTCCCCAGAGACTCCCGCAGCAACATaGCGAGCTTGCTCTCTTTGTATGGAATGTGTTTGC +
Preference number: 6 (lower is better)
Translates to: GSSCSPETPAAT*RACSLCMECVC
Trigger: GCAAACACATTCCATACAAAGAGAGCAAGCTCGCCATGTTGCTGCGGGAGTCTCTGGGGAACATGAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CCA 72 bp GCATCTTGGAGGCTGGGAGTTCAGGGCCTTCTCTGTTaGTCAGCTGACCTTCGGACCCATTATCTTCCTTAT +
Preference number: 6 (lower is better)
Translates to: ASWRLGVQGLLC*SADLRTHYLPY
Trigger: ATAAGGAAGATAATGGGTCCGAAGGTCAGCTGACCAACAGAGAAGGCCCTGAACTCCCAGCCTCCAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp GAAACCCGGACTGAGAAACGGGCGCCGGTCTTTTCCTaGCGTTCGTTTATGAGCTTGAAGAGCCAAGAGATG +
Preference number: 6 (lower is better)
Translates to: ETRTEKRAPVFS*RSFMSLKSQEM
Trigger: CATCTCTTGGCTCTTCAAGCTCATAAACGAACGCAAGGAAAAGACCGGCGCCCGTTTCTCAGTCCGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp AGAGCAGACAGCGAGAGACACAGCCCTGAGCCTCCTTCTCGATTTTaGCTAAGAGCTTTCACACAGCTGCCGAGATCAATGAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: RADSERHSPEPPSRF*LRAFTQLPRSMRCR
Trigger: CCTGCATCTCATTGATCTCGGCAGCTGTGTGAAAGCTCTTAGCAAAAATCGAGAAGGAGGCTCAGGGCTGTGTCTCTCGCTGTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 90 bp GCTGGAAAGCCTGTCCGCATCGTTTTCATCCTTGCGACGTCTAAATaGCAGAAAGGCAGAGTCGTCTTCTCCCTCATTTCTAGAGGCTCG +
Preference number: 6 (lower is better)
Translates to: AGKPVRIVFILATSK*QKGRVVFSLISRGS
Trigger: CGAGCCTCTAGAAATGAGGGAGAAGACGACTCTGCCTTTCTGCAATTTAGACGTCGCAAGGATGAAAACGATGCGGACAGGCTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CCA 72 bp TGCCCAGGTTCTGCATGGAATCATCCTTTCCGATCATaGTGTAGGATTTTCCCAGTTTGGCGTGGCCGAAAC +
Preference number: 6 (lower is better)
Translates to: CPGSAWNHPFRS*CRIFPVWRGRN
Trigger: GTTTCGGCCACGCCAAACTGGGAAAATCCTACACCATGATCGGAAAGGATGATTCCATGCAGAACCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp AGCGAGAGACACAGCCCTGAGCCTCCTTCTCGATTTTaGCTAAGAGCTTTCACACAGCTGCCGAGATCAATG +
Preference number: 6 (lower is better)
Translates to: SERHSPEPPSRF*LRAFTQLPRSM
Trigger: CATTGATCTCGGCAGCTGTGTGAAAGCTCTTAGCAAAAATCGAGAAGGAGGCTCAGGGCTGTGTCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp TGGAGGAACCTGGTTGCCTCTCTTTTGGAAGGCATTTaGACCTCCACAAGTCAGGGGATCGTACAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: WRNLVASLLEGI*TSTSQGIVQGD
Trigger: ATCACCTTGTACGATCCCCTGACTTGTGGAGGTCAAAATGCCTTCCAAAAGAGAGGCAACCAGGTTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS CAA 72 bp ACCATGGCCTTGCTCACTGTGGATATTTTGCAGCCTTaGATGGGGGCTGCTTTGTTGAAAGAGTCATCTCCC +
Preference number: 6 (lower is better)
Translates to: TMALLTVDILQP*MGAALLKESSP
Trigger: GGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATCCACAGTGAGCAAGGCCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CAA 72 bp CAAACCTGCTCCAAGTCAAATTCACTGAGCCACTTGTaGGGATCCAGCATCAGATACTGTTTGGTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QTCSKSNSLSHL*GSSIRYCLVAS
Trigger: GGAGGCGACCAAACAGTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATTTGACTTGGAGCAGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp TCCCAAACCTGCTCCAAGTCAAATTCACTGAGCCACTaGTTGGGATCCAGCATCAGATACTGTTTGGTCGCC +
Preference number: 6 (lower is better)
Translates to: SQTCSKSNSLSH*LGSSIRYCLVA
Trigger: GGCGACCAAACAGTATCTGATGCTGGATCCCAACAAGTGGCTCAGTGAATTTGACTTGGAGCAGGTTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000629409.1
CDS CAA 72 bp TCACTGCTGGAAAGCCTGTCCGCATCGTTTTCATCCTaGCGACGTCTAAATTGCAGAAAGGCAGAGTCGTCT +
Preference number: 6 (lower is better)
Translates to: SLLESLSASFSS*RRLNCRKAESS
Trigger: AGACGACTCTGCCTTTCTGCAATTTAGACGTCGCAAGGATGAAAACGATGCGGACAGGCTTTCCAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CAA 90 bp GCCTTGCTCACTGTGGATATTTTGCAGCCTTTGATGGGGGCTGCTTaGTTGAAAGAGTCATCTCCCATCTCAGACAGGATGAGCAAGTTG +
Preference number: 6 (lower is better)
Translates to: ALLTVDILQPLMGAA*LKESSPISDRMSKL
Trigger: CAACTTGCTCATCCTGTCTGAGATGGGAGATGACTCTTTCAACAAAGCAGCCCCCATCAAAGGCTGCAAAATATCCACAGTGAGCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000483253.1
ENST00000629409.1
CDS CAA 72 bp CCTGTCCGCATCGTTTTCATCCTTGCGACGTCTAAATaGCAGAAAGGCAGAGTCGTCTTCTCCCTCATTTCT +
Preference number: 6 (lower is better)
Translates to: PVRIVFILATSK*QKGRVVFSLIS
Trigger: AGAAATGAGGGAGAAGACGACTCTGCCTTTCTGCAATTTAGACGTCGCAAGGATGAAAACGATGCGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479506.1
ENST00000615502.2
CDS CAA 90 bp AAACATCTTTGGAGGAACCTGGTTGCCTCTCTTTTGGAAGGCATTTaGACCTCCACAAGTCAGGGGATCGTACAAGGTGATCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: KHLWRNLVASLLEGI*TSTSQGIVQGDLLL
Trigger: AAGAAGCAGATCACCTTGTACGATCCCCTGACTTGTGGAGGTCAAAATGCCTTCCAAAAGAGAGGCAACCAGGTTCCTCCAAAGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366518.4
ENST00000407071.7
ENST00000626550.1
ENST00000629409.1
CDS GCA 72 bp GAAAGCAAATGGATCCCACAAGTAATAGCACCAATTTaGAGAAAGGGTTGGGGTCGCTGGTTTATTCTTCTC +
Preference number: 6 (lower is better)
Translates to: ESKWIPQVIAPI*RKGWGRWFILL
Trigger: GAGAAGAATAAACCAGCGACCCCAACCCTTTCTGCAAATTGGTGCTATTACTTGTGGGATCCATTTGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp ATCCCACAAGTAATAGCACCAATTTGCAGAAAGGGTTaGGGTCGCTGGTTTATTCTTCTCTTCAAAGCATGC +
Preference number: 6 (lower is better)
Translates to: IPQVIAPICRKG*GRWFILLFKAC
Trigger: GCATGCTTTGAAGAGAAGAATAAACCAGCGACCCCAACCCTTTCTGCAAATTGGTGCTATTACTTGTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CAA 72 bp GATCCCACAAGTAATAGCACCAATTTGCAGAAAGGGTaGGGGTCGCTGGTTTATTCTTCTCTTCAAAGCATG +
Preference number: 6 (lower is better)
Translates to: DPTSNSTNLQKG*GSLVYSSLQSM
Trigger: CATGCTTTGAAGAGAAGAATAAACCAGCGACCCCAACCCTTTCTGCAAATTGGTGCTATTACTTGTGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407071.7
CDS CCA 72 bp GCTACTGCTTTCCAATCCATCATCATTGATAAGTCATaGCTAAATAATCAAGTGCAGAATCCATTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: ATAFQSIIIDKS*LNNQVQNPFLH
Trigger: GTGAAGAAATGGATTCTGCACTTGATTATTTAGCCATGACTTATCAATGATGATGGATTGGAAAGCAGTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366518.4
ENST00000626550.1