RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF26A (Homo sapiens)

Ensembl gene IDs: ENSG00000066735

Ensembl transcript IDs: ENST00000315264.7, ENST00000423312.7

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTaGACACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGC +
Preference number: 1 (lower is better)
Translates to: QPAPAPARTGAAGPG*TQLLLVSQVCSTKC
Trigger: GCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CCA 90 bp CAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTaGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCCGGCCCT +
Preference number: 1 (lower is better)
Translates to: QGQRHLRCCRVVTVF*SPWHPRSVHRVAGP
Trigger: AGGGCCGGCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR TCA 90 bp AAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTaGCGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCG +
Preference number: 1 (lower is better)
Translates to: KVQIKVKGTCVAVGW*RSSGHPGTLALSTA
Trigger: CGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR GCA 90 bp TGCAAAAGGGAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTaGTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGC +
Preference number: 1 (lower is better)
Translates to: CKREKSPNQGQRHLR*CRVVTVFWSPWHPR
Trigger: GCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTCCCTTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR TCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGTTGCTGTCGGGTGGTaGCGGTCTTCTGGTCACCCT +
Preference number: 2 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCVAVGW*RSSGHP
Trigger: AGGGTGACCAGAAGACCGTCACCACCCGACAGCAAC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTGAGACTCCCGTCCTaGACAGAAACCCCTCCGCAT +
Preference number: 2 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCLRLPS*TETPPH
Trigger: ATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAG...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR GCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCCGTCCTCCAGCCCGCTaGACGCCCCCTCCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPRPPAR*TPPPLV
Trigger: GACAAGAGGAGGGGGCGTGCAGCGGGCTGGAGGACG...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGTCTTCTGGTCACCCTaGCACCCTCGCTCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: PLLAALGTERVLGKGGDSVFWSP*HPRSVH
Trigger: GTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGAC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR CCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGTGGTGACGGTCTTCTaGTCACCCTGGCACCCTCGC +
Preference number: 2 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEVVTVF*SPWHPR
Trigger: GCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCAC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR TCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGACTCCGTCTCCTCTCTaGGACTCCCGTCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: LVSCPRDRAGSREGRGLETPSPL*DSRPAQ
Trigger: CTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGT...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCACTCCACAAAAACTaGTTGGCTGCAAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPLHKN*LAAKKA
Trigger: TGCCTTCTTTGCAGCCAAGCAGTTTTTGTGGAGTGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CAA 90 bp ATGCAAAAGGGAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTaGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCG +
Preference number: 2 (lower is better)
Translates to: MQKGEKSKSRSKALA*LSGGDGLLVTLAPS
Trigger: CGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTCCCTTTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CAA 90 bp ACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAGGTCAAAGGCACTaGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TKCKREKSPNQGQRH*RCCRVVTVFWSPWH
Trigger: GTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTCCCTTTTGCATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CCA 72 bp CGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTaGCACCCTCGCTCTGTCCACCGCGTGGCCGGCCCT +
Preference number: 3 (lower is better)
Translates to: RCCRVVTVFWSP*HPRSVHRVAGP
Trigger: AGGGCCGGCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR TCA 72 bp CCAGCCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTaGACACAACTTCTGCTGGTGTCTCAAGTCTGTAGC +
Preference number: 3 (lower is better)
Translates to: PAPARTGAAGPG*TQLLLVSQVCS
Trigger: GCTACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CCA 72 bp AGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTaGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTG +
Preference number: 3 (lower is better)
Translates to: RHLRCCRVVTVF*SPWHPRSVHRV
Trigger: CACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR-3UTR CAA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTCAAAGGCACTTGCGTaGCTGTCGGGTGGTGACGGT +
Preference number: 3 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSKALA*LSGGDG
Trigger: ACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CCA 72 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTaGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: QAQRGRAEHNFC*CLKSVAPNAKG
Trigger: CCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR GCA 72 bp GGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTaGTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAA +
Preference number: 3 (lower is better)
Translates to: GQAQRGRAEHNF*WCLKSVAPNAK
Trigger: TTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR GCA 72 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTaGTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: EKSPNQGQRHLR*CRVVTVFWSPW
Trigger: CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR GCA 72 bp CAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATaGAAAAGGGAGAAAAGTCCAAATCAAGGTCAAAGG +
Preference number: 3 (lower is better)
Translates to: QLLLVSQVCSTK*KREKSPNQGQR
Trigger: CCTTTGACCTTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTGGTCCCGGGCCCGCTaGCCAGCTTCCACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGWSRAR*PASTPV
Trigger: GACAGGCGTGGAAGCTGGTCAGCGGGCCCGGGACCA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCGGCCAGGTGGGCTCTaGCCCAGGCGAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLRPGGL*PRRAQP
Trigger: GGGCTGTGCTCGCCTGGGCCAGAGCCCACCTGGCCG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGCCTGCGGGCCGCCCTaGCTGCCACCTCACACCCGT +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLACGPP*LPPHTR
Trigger: ACGGGTGTGAGGTGGCAGCCAGGGCGGCCCGCAGGC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTGGCGCAGGGCACGATaGCCAGGCTCTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGWRRAR*PGSGVS
Trigger: GCTCACCCCAGAGCCTGGGCATCGTGCCCTGCGCCA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGCTCCGGACAGCGACTaGCAGCAGCCAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCAPDSD*QQPGGG
Trigger: GCCCCCGCCTGGCTGCTGGCAGTCGCTGTCCGGAGC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCTGCCGCATGGGTCCTaGTCGGGCCCGGCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPLPHGS*SGPAGS
Trigger: GCTACCCGCCGGGCCCGACCAGGACCCATGCGGCAG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTAGCCCGGGGTGGGGGTaGCCAGGGCTGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPSPGWG*PGLTCR
Trigger: TCTGCACGTCAGCCCTGGTCACCCCCACCCCGGGCT...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCGGGGCTCCACTGGCTaGCAGCTCATGGACGCGGCT +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLRGSTG*QLMDAA
Trigger: AGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCCG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGCCGCAGCCTTGTACTaGCGCACGCCAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLAAALY*RTPDPG
Trigger: CCCAGGGTCTGGCGTGCGTCAGTACAAGGCTGCGGC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCCACCTGCCCACTCATaGCCACGGGAGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLPPAHS*PREGSV
Trigger: CACGGACCCCTCCCGTGGGCATGAGTGGGCAGGTGG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCAGGCTGGGGCCTCCATaGGGGGCGTCAAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGRLGPP*GASRSS
Trigger: TGAGGACCTTGACGCCCCCCATGGAGGCCCCAGCCT...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCAGACACCTGGACACTaGGCCCGGGGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLQTPGH*ARGTRP
Trigger: TGGCCTGGTCCCCCGGGCCCAGTGTCCAGGTGTCTG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGGCCCGGGGCTCCACTaGCTGACAGCTCATGGACGC +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLGPGLH*LTAHGR
Trigger: GCGTCCATGAGCTGTCAGCCAGTGGAGCCCCGGGCC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCCCCCACTCTCGCTCATaGAGTCAGGGGCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGPHSRS*SQGRRR
Trigger: CCTCCTCCGCCCCTGACTCCATGAGCGAGAGTGGGG...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGCGGGAGGAAGCTGTTaGCCCGCGAGACACTCCACA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGAGGSC*PARHST
Trigger: TGTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGCCAGCGAGTCGGGGCTaGAGCGGGGCTGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSPASRG*SGAAAW
Trigger: CCACGCCGCAGCCCCGCTTCAGCCCCGACTCGCTGG...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCCGGGAGCAGGGCGGCTaGCGCATGGGTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGREQGG*RMGPGR
Trigger: CCGACCAGGACCCATGCGGCAGCCGCCCTGCTCCCG...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGCAGCTCCGCGAAGGTaGTGCAGCGGAAGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGAAPRR*CSGSGL
Trigger: CAGACCACTTCCGCTGCAGCACCTTCGCGGAGCTGC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGGGGACCCAGCCACCTaGCCACTCATGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCGDPAT*PLMPTG
Trigger: TCCCGTGGGCATGAGTGGGCAGGTGGCTGGGTCCCC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCGGGCTGAAGCGGGGCTaGGGCGTGGGGTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGGLKRG*GVGSRL
Trigger: CAGCCGTGACCCCACGCCGCAGCCCCGCTTCAGCCC...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCCCTTGCTGCTGCTGTaGGCCAGGCCTTCGTACCGC +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLPLLLL*ARPSYR
Trigger: GCGGTACGAAGGCCTGGCGCACAGCAGCAGCAAGGG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCACCTCCCGCAGCCGCTaGTGCCTGCGCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGTSRSR*CLRSAS
Trigger: GCTGGCGGAGCGCAGGCAGCAGCGGCTGCGGGAGGT...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCCCCCGCCAGAGGAGCTaGAGGCGTACTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGPRQRS*RRTWPS
Trigger: AGAAGGCCAAGTACGCCTCCAGCTCCTCTGGCGGGG...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCAGGCTAGCATCACCTaGGCCTCAGGCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPQASIT*ASGSRG
Trigger: CCCCCGGCTGCCTGAGGCCCAGGTGATGCTAGCCTG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCTGCTTTGTGCCCATaGCGGTACCCCGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPPALCP*RYPGQP
Trigger: AGGCTGGCCGGGGTACCGTCATGGGCACAAAGCAGG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGGGCGGGGCCGCTaGAGGCGCTCCACGTCATCG +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRVGRGR*RRSTSS
Trigger: CGATGACGTGGAGCGCCTTCAGCGGCCCCGCCCCAC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGCAGCGGGGCCGGGCTaGACACAACTTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCAAGPG*TQLLLV
Trigger: CACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCTTTGGTTCTGGAGCTaGGCCCCACACACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLLWFWS*APHTGS
Trigger: GGACCCCGTGTGTGGGGCGCAGCTCCAGAACCAAAG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGCTCCGCGAAGGTGCTaGAGCGGAAGTGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLAPRRC*SGSGLR
Trigger: ACGCAGACCACTTCCGCTGCAGCACCTTCGCGGAGC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCCTGAGCTCCGTCGGTaGCACCTGGACCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCPELRR*HLDLLR
Trigger: CCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGG...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCTGGCAGCCATCGGGGTaGCCACGGCCTTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGWQPSG*PRPSWG
Trigger: CCCCCAGGAAGGCCGTGGGCACCCCGATGGCTGCCA...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGCTCAGGCCAAGCGCTaGTGTCCTCTCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGAQAKR*CPLSGH
Trigger: GTGACCAGAGAGAGGACAGCAGCGCTTGGCCTGAGC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGCGGGCCGCCCTGGCTaGCACCTCACACCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSAGRPG*HLTPVH
Trigger: GTGGACGGGTGTGAGGTGGCAGCCAGGGCGGCCCGC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGGGCCGAGGCCGGGCTaGTCCTCTGCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSGPRPG*SSAPGW
Trigger: CCAGCCTGGAGCAGAGGAGCAGCCCGGCCTCGGCCC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCTAGGCCACGGCCCTTaGCTCCACCAACAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPLGHGP*LHQQGA
Trigger: AGCCCCCTGTTGGTGGAGGCAAGGGCCGTGGCCTAG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGAGGTCAGCCATCCCTaGCCGGGAGACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCEVSHP*PGDPRM
Trigger: CATCCTGGGGTCTCCCGGGCAGGGATGGCTGACCTC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTAGGACCCGCTGGTCCTaGCGTGTCCCTCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPRTRWS*RVPRAG
Trigger: ACCAGCTCGAGGGACACGCCAGGACCAGCGGGTCCT...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCTTCAGGAAGGACATaGCCTCGGCCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPPSGRT*PRPSAG
Trigger: CCCAGCGCTCGGCCGAGGCCATGTCCTTCCTGAAGG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTACACTCCCGGAGACTaGGTGTCCTGGAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGYTPGD*VSWRLP
Trigger: TGGCAGCCTCCAGGACACCCAGTCTCCGGGAGTGTA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTACACGTGGGCGATCATaGTGGTGCGGCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCTRGRS*WCGSQR
Trigger: CCGCTGGCTGCCGCACCACCATGATCGCCCACGTGT...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCAGTGTCTCTGCGTGCTaGGCTGGCGCATCCGACACG +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLSVSAC*AGASDT
Trigger: CGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACT...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGGCTCAGGGGTACCCTaGTGGGTGTCTGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGGSGVP*WVSGPE
Trigger: TTCTGGTCCAGACACCCACCAGGGTACCCCTGAGCC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTGGAGGCTGGAGTGGATaGTCTGGGCTGCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPGGWSG*SGLRMP
Trigger: GGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCC...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTCCCCAGGACACAGCTaGCGTTGTCACACCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGSPGHS*RCHTQR
Trigger: ACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCAGGCCACCACCTCCGTaGGAGCATCTCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLRPPPP*EHLPRT
Trigger: TGTCCTGGGGAGATGCTCCCACGGAGGTGGTGGCCT...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTTCCTCTGCTCCAGGCTaGACTTCCGCGTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCSSAPG*TSAWVG
Trigger: CCCCACCCACGCGGAAGTCCAGCCTGGAGCAGAGGA...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCCTGCTTCTACCTTGCTaGCCCGGGCCTTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLLLLPC*PGPSGW
Trigger: CCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAG...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCGGGCCCCCACAGCCTTaGCTGCGCCGCTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGGPPQP*LRRSYR
Trigger: CCTGTAGGAGCGGCGCAGCCAAGGCTGTGGGGGCCC...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTAGCATCAGCCGGCCCTaGGTCTCGGCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCSISRP*VSASSS
Trigger: TGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCT...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGCTGGGCCTGGATGGTaGCCGTGCTCAGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRAGPGW*PCSAPL
Trigger: GAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTTCCCGTGTGAGCTGCTaGAGGTGTGTGGCGCAGACG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCSRVSC*RCVAQT
Trigger: CGTCTGCGCCACACACCTGCAGCAGCTCACACGGGA...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTACTTGGCCTTCTTCCTaGGCAGGCGGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCTWPSS*AGGGCG
Trigger: CCCGCATCCACCGCCTGCGCAGGAAGAAGGCCAAGT...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGGCTTCCCGGCCCTTaGTGCTGCTGTGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLGLPGP*CCCAPG
Trigger: GCCTGGCGCACAGCAGCAGCAAGGGCCGGGAAGCCC...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCCCACAGCCTTGGCTaGGCCGCTCCTACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPHSLG*AAPTGG
Trigger: CCCGCCTGTAGGAGCGGCGCAGCCAAGGCTGTGGGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCAGTATGAGCCTGTCGTaGGGGGACGTCGCAAACGCT +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGSMSLS*GDVANA
Trigger: AGCGTTTGCGACGTCCCCGCACGACAGGCTCATACT...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCAAGGTCCTCATGGCTaGCAGGGGCCTGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPQGPHG*QGPAAG
Trigger: ACCTGCTGCAGGCCCCTGCCAGCCATGAGGACCTTG...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTGGGAACTGCAGCAGTaGCGGCTCGCCGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSWELQQ*RLAGGL
Trigger: CAGGCCCCCGGCGAGCCGCCACTGCTGCAGTTCCCA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTCAGGGGTACCCTGGTaGGTGTCTGGACCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGSGVPW*VSGPEL
Trigger: CAGTTCTGGTCCAGACACCCACCAGGGTACCCCTGA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGCCACCTGGACCTCCTaGGGGACCCTCGTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRATWTS*GTLVAV
Trigger: GACGGCAACGAGGGTCCCTCAGGAGGTCCAGGTGGC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGCGCTGGGCCCCCTGTaGGGGCCAGATCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEALGPL*GPDPQH
Trigger: ATGCTGCGGATCTGGCCCGCACAGGGGGCCCAGCGC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGCCCAGGTCGATGAGGTaGAGGCGGCTGCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEPRSMR*RRLRPP
Trigger: CGGAGGCCGCAGCCGCCTGCACCTCATCGACCTGGG...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTTGTCTGGACCAGAACTaGCTCGAGGGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCCLDQN*LEGCWQ
Trigger: CTGCCAGCACCCCTCGAGGCAGTTCTGGTCCAGACA...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGCACGGGAGGGGTCCGTaGCACTCCATCAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSHGRGP*HSISAP
Trigger: GGGGGCACTGATGGAGTGGCACGGACCCCTCCCGTG...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGCCGGGCTGCTCCTCTaGTCCAGGCTGGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLAGLLL*SRLDFR
Trigger: GCGGAAGTCCAGCCTGGAGCAGAGGAGCAGCCCGGC...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCCGGCCCTTGCTGCTaGTGTGCGCCAGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPGPCC*CAPGLR
Trigger: ACGAAGGCCTGGCGCACAGCAGCAGCAAGGGCCGGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGATGGCAGCACTGGCTaGAACGCTGATGTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGDGSTG*NADVEA
Trigger: TGCTTCGACATCAGCGTTGCAGCCAGTGCTGCCATC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCAGCTTCGTGTGGCAGTaGCGGCACCAGCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLSFVWQ*RHQPPP
Trigger: CGGAGGCGGCTGGTGCCGCCACTGCCACACGAAGCT...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCGGTGCTACAGACACCTaGACACTGGGCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGGATDT*TLGPGD
Trigger: GTCCCCCGGGCCCAGTGTCCAGGTGTCTGTAGCACC...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGGAGACTGGGTGTCCTaGAGGCTGCCAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSGDWVS*RLPGAT
Trigger: GGTGGCCCCTGGCAGCCTCCAGGACACCCAGTCTCC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTAGCTCGCTTTGGTTCTaGAGCTGCGCCCCACACACG +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPSSLWF*SCAPHT
Trigger: CGTGTGTGGGGCGCAGCTCCAGAACCAAAGCGAGCT...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCCCAGGCGGGGGCAGGTaGCCCCAGGAAGCATCGGGG +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPPGGGR*PQEASG
Trigger: CCCCGATGCTTCCTGGGGCCACCTGCCCCCGCCTGG...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCGAGCTGCACGGTGCTaGGTGTCTCTGCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRRAARC*VSLRAG
Trigger: CCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGTCATGGCCGCTGTCTaGGTCCGCCGAGCCCCACGA +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEVMAAV*VRRAPR
Trigger: TCGTGGGGCTCGGCGGACTCAGACAGCGGCCATGAC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGGGCGATCATGGTGGTaGGGCAGCCAGCGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEGRSWW*GSQRWP
Trigger: TGGCCACCGCTGGCTGCCGCACCACCATGATCGCCC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTCGGGATGGGGCCACTaGAGCCACTTCCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSGWGH*SHFPRA
Trigger: TGCCCTGGGGAAGTGGCTGCAGTGGCCCCATCCCGA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCAGTGGTCAGCCCGGCTaGTGGGTCTGGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRSGQPG*WVWAPP
Trigger: AGGAGGAGCCCAGACCCAGCAGCCGGGCTGACCACT...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTTCCGGCAAGACGGTGTaGTGCTTCTACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TTSSLRPTSRPPARCTPPSGKTV*CFYLAG
Trigger: GCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGA...AGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCTTCCCGGCCCTTGCTaGTGCTGTGCGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLLPGPC*CCAPGL
Trigger: AAGGCCTGGCGCACAGCAGCAGCAAGGGCCGGGAAG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGTGGGGCGGTCACCTTaGTGTAGGGGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEVGRSP*CRGRAG
Trigger: CCCTGCCCTCCCCCTACAGCAAGGTGACCGCCCCAC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCTCTCATAGCCACTGCTaGCACCGCTGTGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGSHSHC*HRCGGK
Trigger: TTTTCCACCACAGCGGTGGCAGCAGTGGCTATGAGA...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGCGTCAAGGTCCTCATaGCTGGCAGGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSASRSS*LAGACS
Trigger: GCTGCAGGCCCCTGCCAGCCATGAGGACCTTGACGC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCCCTTGGTCCTGTCTaGCCCAGCTCGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPLGPV*PSSSWL
Trigger: CAGCCAGGACGAGCTGGGCCAGACAGGACCAAGGGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCCTCCAGGCACTGCTaGGCCTGGATGGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPSRHC*AWMVTV
Trigger: CACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCTGCGGCAGCCAGCGGTaGCCAGGGATTCACGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLCGSQR*PGIHAA
Trigger: TGCTGCGTGAATCCCTGGCCACCGCTGGCTGCCGCA...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGCGTGGGCGATCATGGTaGTGCGGCAGCCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLERGRSW*CGSQRW
Trigger: CCACCGCTGGCTGCCGCACCACCATGATCGCCCACG...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGGGCGCATCCGACACGTaGGCGATCATGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSGASDT*AIMVVR
Trigger: CCGCACCACCATGATCGCCCACGTGTCGGATGCGCC...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGAGCGGGGCTGCGGCGTaGGGTCACGGCTGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWSGAAA*GHGCRQ
Trigger: CTGCCGACAGCCGTGACCCCACGCCGCAGCCCCGCT...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTACTGTCAGGTCTGTCTaGCCCCAGGAACCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCTVRSV*PQEPRA
Trigger: AGCTCTGGGTTCCTGGGGCCAGACAGACCTGACAGT...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTTGTCACACCCAGCGTaGTGGCACCCCTCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSLSHPA*WHPSAA
Trigger: CGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCCCCGGGCCTTCAGGCTaGACGTGGCCCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPPGPSG*TWPWGQ
Trigger: CTGTCCCCAGGGCCACGTCCAGCCTGAAGGCCCGGG...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGACCGTGTGTGGGGCTaGAGGGTGGCACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRDRVWG*RVAHPA
Trigger: AGCTGGGTGTGCCACCCTCCAGCCCCACACACGGTC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAACGCCAGACCCTGGGTaGGGGCCTCCCTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVTPDPG*GPPSGW
Trigger: CCACCCCGAGGGAGGCCCCCACCCAGGGTCTGGCGT...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGACGCACGCCAGACCCTaGGTGGGGGCCTCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWTHARP*VGASLG
Trigger: CCCGAGGGAGGCCCCCACCCAGGGTCTGGCGTGCGT...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCAGCCATCAGCCCCACTaGCCACCGACTGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLSHQPH*PPTGAR
Trigger: ACGTGCTCCAGTCGGTGGTCAGTGGGGCTGATGGCT...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCACGCAGCAGCATGGTaGGCCTGTGGTCCCGATACG +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRHAAAW*ACGPDT
Trigger: CGTATCGGGACCACAGGCTCACCATGCTGCTGCGTG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGACCTTCGTTGTCGGTaGGCTCCCGGTCTGACAGCG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLDLRCR*APGLTA
Trigger: CGCTGTCAGACCGGGAGCTCACCGACAACGAAGGTC...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCGGGTCACTGTGGTGGTaGGCAGGCCCCGCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASGSLWW*AGPAPD
Trigger: GTCCGGAGCGGGGCCTGCTCACCACCACAGTGACCC...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGCCTCCCGTGTGAGCTaGTGCAGGTGTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEASRVS*CRCVAQ
Trigger: CTGCGCCACACACCTGCAGCAGCTCACACGGGAGGC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCATGCCCTCCAGGCACTaGTGGGCCTGGATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLMPSRH*WAWMVT
Trigger: GGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCAT...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGGGTGTCCTGGAGGCTaGCAGGGGCCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWGCPGG*QGPPRP
Trigger: TGGCCGAGGTGGCCCCTGGCAGCCTCCAGGACACCC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCATTCCAGCCGCTCCTaGAGCTCCGCGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRHSSRS*SSAKVL
Trigger: CAGCACCTTCGCGGAGCTGCAGGAGCGGCTGGAATG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCCTGAGGGACCCTCGTTaGCGTCCATGCATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGLRDPR*RPCIPA
Trigger: GGCTGGAATGCATGGACGGCAACGAGGGTCCCTCAG...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTGGAGGAGCCGTGACTaGTGCCGGCCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASWRSRD*CRPRLP
Trigger: GGGCAGCCTGGGCCGGCAGCAGTCACGGCTCCTCCA...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGCTGCTTCTACCTTaGTGGCCCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRVLLLP*WPGPSG
Trigger: GCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCAC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGCCACAGTGCGTGGGTaGAAGGGCCGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVATVRG*KGRRCG
Trigger: CCCGCACCTGCGGCCCTTCCACCCACGCACTGTGGC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCCCCTTGGAGGGCCGGTaGCGGCTCAGGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASPLEGR*RLRAGM
Trigger: CATCCCTGCCCTGAGCCGCCACCGGCCCTCCAAGGG...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGGGGGATGCAGCCTCTaGTGGCGAGGGCTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWGGCSL*WRGLPA
Trigger: GGCCGGAAGCCCTCGCCACCAGAGGCTGCATCCCCC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCAGCCCACACGGGTGGTaGCAGAGGCAGTCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLSPHGW*QRQSSV
Trigger: AACCGAGGACTGCCTCTGCCACCACCCGTGTGGGCT...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCTCACACCCAGCGTGGTaGCACCCCTCCGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPSHPAW*HPSAAV
Trigger: CACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGA...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCGGCTGGACGTGGCCCTaGGGACAGAGTGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPGWTWP*GQSGQP
Trigger: GGGCTGACCACTCTGTCCCCAGGGCCACGTCCAGCC...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGACTGCCCGGGGAGGCTaGGCTTACGGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWTARGG*AYGPGQ
Trigger: CTGCCCTGGGCCGTAAGCCCAGCCTCCCCGGGCAGT...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCTCCACGCCTGTCGCTTaGGCTCCACCAGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRSTPVA*APPASC
Trigger: ACACGAAGCTGGTGGAGCTCAAGCGACAGGCGTGGA...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGCTGCAGGACCCCGCTaGAGTCGGTGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVAAGPR*SRWGRW
Trigger: CCACCTACCCCACCGACTTCAGCGGGGTCCTGCAGC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGCACACCTCCACGGCTaGGACCCGGACGGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWAHLHG*DPDGEA
Trigger: CGCTTCTCCGTCCGGGTCTCAGCCGTGGAGGTGTGC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCGGTAGACGTGCAGCGTaGACAACATGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGGRRAA*TTCGSC
Trigger: GCAGCTCCCACATGTTGTTCACGCTGCACGTCTACC...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCCAGGCTTCCAGCAACTaGGGAGGTGGGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASQASSN*GGGGAG
Trigger: CCCGGCTCCCCCACCTCCTCAGTTGCTGGAAGCCTG...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCGCTCGTCCTCGCCGTTaGGCTCCACTGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASARPRR*APLAAA
Trigger: TGCAGCGGCCAGTGGAGCTCAACGGCGAGGACGAGC...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTATCTTCTTGGGGGACTTaGGGCTGCGGGTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVSSWGT*GCGCGR
Trigger: GCGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAGA...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCACTCCGTCTCCTCTCTaGGACTCCCGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRTPSPL*DSRPAQ
Trigger: CTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGT...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCTGCCTCCACTCACTaGAGCCTTTTCCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPASTH*SLFRDQ
Trigger: CTGGTCCCGGAAAAGGCTGCAGTGAGTGGAGGCAGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGTGGATGGTCTGGGCTaGGGATGCCCACCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWVDGLG*GCPPRG
Trigger: CCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCAC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGGCAGGTCCACCCACTaGCCGGGGAGGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWGRSTH*PGRLGL
Trigger: TAAGCCCAGCCTCCCCGGGCAGTGGGTGGACCTGCC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCTCACACAGGTGCTTGTaGTTGGCCTGCACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLSHRCL*LACTSR
Trigger: GCGGGAGGTGCAGGCCAAGCACAAGCACCTGTGTGA...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTCAGCCCTTGTTAGCTaGCCTCGGGACAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSALVS*PRDRAG
Trigger: ACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGCTGA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCAGCGTGAACAACATGTaGGAGCTGCGTCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRSVNNM*ELRRAS
Trigger: GGACGCCCGACGCAGCTCCCACATGTTGTTCACGCT...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCCTCTGCGTGCTGGGCTaGCGCATCCGACACGTGGGC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASLCVLG*RIRHVG
Trigger: GCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAG...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGCGGGAGACCCCAGGATaGATCTGCGTTGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSRETPG*ICVENP
Trigger: GGGGTTCTCAACGCAGATCCATCCTGGGGTCTCCCG...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGCATGGCCTCCCGTGTaGGCTGCTGCAGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWAWPPV*AAAGVW
Trigger: CCACACACCTGCAGCAGCTCACACGGGAGGCCATGC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAAACATCTTGGGAACTaGAGCAGTGGCGGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSKHLGN*SSGGSP
Trigger: CGGCGAGCCGCCACTGCTGCAGTTCCCAAGATGTTT...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCAACTGCCTCGAGGGGTaGTGGCAGCCATCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASNCLEG*WQPSGC
Trigger: GCACCCCGATGGCTGCCAGCACCCCTCGAGGCAGTT...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGATCAGGCGCCGCCGCTaGAGACCTGTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWIRRRR*RPVALF
Trigger: GAAGAGGGCCACAGGTCTGCAGCGGCGGCGCCTGAT...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACAGGTTCACGCACTaGTCCAGGGCCGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWHRFTH*SRAAVA
Trigger: AGCCACGGCGGCCCTGGAGCAGTGCGTGAACCTGTG...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCTGAGACTCCCGTCCTaGACAGAAACCCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRLRLPS*TETPPH
Trigger: ATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCACCAGGCCAGCCCCTTaGTCCTGTCTGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASTRPAP*SCLAQL
Trigger: GAGCTGGGCCAGACAGGACCAAGGGGCTGGCCTGGT...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCCACTGACCACCGACTaGAGCACGTCGGCCACGGTC +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWPLTTD*STSATV
Trigger: GACCGTGGCCGACGTGCTCCAGTCGGTGGTCAGTGG...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGCATGGTGAGCCTGTaGTCCCGATACGGCACATGC +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSMVSL*SRYGTC
Trigger: GCATGTGCCGTATCGGGACCACAGGCTCACCATGCT...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACAGCCCACACGGGTaGTGGCAGAGGCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWHSPHG*WQRQSS
Trigger: CGAGGACTGCCTCTGCCACCACCCGTGTGGGCTGTG...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTACCTACAGGCGGGAGCTaGACCGTGTGTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVPTGGS*TVCGAG
Trigger: TCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGG...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGTCTTCTGGTCACCCTaGCACCCTCGCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEVFWSP*HPRSVH
Trigger: GTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGAC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGAGGCAACCTGTACCTaGGGCTCAGCCCTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHREATCT*GSALVS
Trigger: GCTAACAAGGGCTGAGCCCCAGGTACAGGTTGCCTC...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGGTGAGCTCCCGGTCTaGCAGCGCCGCCCCACCGGG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTGELPV*QRRPTG
Trigger: CCCGGTGGGGCGGCGCTGTCAGACCGGGAGCTCACC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGATCCTCAGAAAGTATaGGCCTGTCGTGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEDPQKV*ACRAGT
Trigger: CGTCCCCGCACGACAGGCTCATACTTTCTGAGGATC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCTCCAAGACCCGCAGGTaGTACAGACACCTGGACACT +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLSKTRR*YRHLDT
Trigger: AGTGTCCAGGTGTCTGTAGCACCTGCGGGTCTTGGA...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTCACCTTCCCGATGCTaGCAGGGTTGTCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSPSRC*QGCPWS
Trigger: AGACCAAGGACAACCCTGGCAGCATCGGGAAGGTGA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGTCCCGATACGGCACATaGTTGGCTCCGTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LVSCPRDRAGSREGRGLESRYGT*LAPLTR
Trigger: CCTGGTCAACGGAGCCAAGCATGTGCCGTATCGGGA...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCATGCGGGCGGCGAGCTaGACGGTGCTGAGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASMRAAS*TVLSVS
Trigger: AGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCAT...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCCCTCGTTGCCGTCCATaGATTCCAGCCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPPRCRP*IPAAPA
Trigger: TGCAGGAGCGGCTGGAATGCATGGACGGCAACGAGG...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTGACCATCATGACGTaGGCCTTGCACAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLVTIMT*ALHRFT
Trigger: CGTGAACCTGTGCAAGGCGCACGTCATGATGGTCAC...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCACCCCAGGATGGATCTaGGTTGAGAACCCCACACAG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLTPGWI*VENPTQ
Trigger: CTGTGTGGGGTTCTCAACGCAGATCCATCCTGGGGT...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAAGGCACTGCTGGGCCTaGATGGTGACCGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVRHCWA*MVTVLS
Trigger: GCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCT...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCGAAGGCAAACATCTTaGGAACTGCAGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLRRQTS*ELQQWR
Trigger: CCGCCACTGCTGCAGTTCCCAAGATGTTTGCCTTCG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCTGTCCTTCCCGATCATaGTGTACGACTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRCPSRS*CTTCPG
Trigger: GCCTGGGCAAGTCGTACACCATGATCGGGAAGGACA...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGCCGTTGAGCTCCACTaGCCGCTGCAGGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVAVELH*PLQGHC
Trigger: ACAGTGACCCTGCAGCGGCCAGTGGAGCTCAACGGC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCTACCCGGAGCAGCCATaGGTCCTCAAACAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPYPEQP*VLKQAS
Trigger: GGAGGCCTGTTTGAGGACCCATGGCTGCTCCGGGTA...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCCCTTCAGGCTGGACGTaGCCCTGGGGACAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASPSGWT*PWGQSG
Trigger: ACCACTCTGTCCCCAGGGCCACGTCCAGCCTGAAGG...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTATGTGGGGCTGGAGGGTaGCACACCCAGCTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVCGAGG*HTQLGY
Trigger: GTACCCAAGCTGGGTGTGCCACCCTCCAGCCCCACA...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTTCACGCCGCTGTCATaGCCGCTGTCTGAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASFTPLS*PLSESA
Trigger: GGCGGACTCAGACAGCGGCCATGACAGCGGCGTGAA...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCGGACGTCGCAAACGCTaGCAGGCTCACCCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASGRRKR*QAHPSS
Trigger: AGACGAGGGGTGAGCCTGCCAGCGTTTGCGACGTCC...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCGATCTCGTACACCTTaGTCTCGAACGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRRSRTP*SRTAPS
Trigger: TGAAGGAGCCGTTCGAGATCAAGGTGTACGAGATCG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGTTGCTGTCGGGTGGTaGCGGTCTTCTGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVVAVGW*RSSGHP
Trigger: AGGGTGACCAGAAGACCGTCACCACCCGACAGCAAC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTTGCGCAGGCGGTGGATaGGGGCGGCGAGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLCAGGG*GRRAAR
Trigger: CCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCA...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGGCAAGACGGTGTGCTaGTTCTACCTTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWGKTVC*FYLAGP
Trigger: CGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGGGCTCTCATAGCCACTaGTGCCACCGCTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWGSHSH*CHRCGG
Trigger: TCCACCACAGCGGTGGCAGCAGTGGCTATGAGAGCC...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCAGCTCCTCACACAGGTaGTTGTGCTTGGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPSSSHR*LCLACT
Trigger: GGTGCAGGCCAAGCACAAGCACCTGTGTGAGGAGCT...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGTGGAGGTGCCGCGGGTaGCTGGAGGCGGTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTWRCRG*LEAVAG
Trigger: ACCCGCCACCGCCTCCAGCCACCCGCGGCACCTCCA...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTTCATGGACGCGGCTGTaGGCAGCCCGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLSWTRL*AARSAC
Trigger: GCAGGCGCTCCGGGCTGCTCACAGCCGCGTCCATGA...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTAGGAGCCGTGACTGCTaGCGGCCCAGGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLRSRDC*RPRLPP
Trigger: AGGGGGCAGCCTGGGCCGGCAGCAGTCACGGCTCCT...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCAAAGGCACTTGCGTTaGTGTCGGGTGGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWQRHLR*CRVVTV
Trigger: GACCGTCACCACCCGACAGCAACGCAAGTGCCTTTG...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGTTCCTGCGCAGGCGGTaGATGCGGGCGGCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTFLRRR*MRAASC
Trigger: GCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAA...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCGTCTCGGGGACCCTTaGAGGGCCGGTGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTRLGDP*RAGGGS
Trigger: TGAGCCGCCACCGGCCCTCCAAGGGTCCCCGAGACG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGGATGCAGCCTCTGGTaGCGAGGGCTTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLGCSLW*RGLPAP
Trigger: GGGGGCCGGAAGCCCTCGCCACCAGAGGCTGCATCC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCTGCGGCCCCGGGATaGCAGCACTGGCTGCAACGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPAAPG*QHWLQR
Trigger: GCGTTGCAGCCAGTGCTGCCATCCCGGGGCCGCAGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGTCCTGGCTGCCTCCCTaGAGGACCCGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTSWLPP*RTRWSW
Trigger: CCAGGACCAGCGGGTCCTGCAGGGAGGCAGCCAGGA...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGGCCTTCCTGGGGGATaGAGCCTCTGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTGLPGG*SLWWRG
Trigger: CCCTCGCCACCAGAGGCTGCATCCCCCAGGAAGGCC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCGTCCTCCAGCCCGCTaGACGCCCCCTCCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTRPPAR*TPPPLV
Trigger: GACAAGAGGAGGGGGCGTGCAGCGGGCTGGAGGACG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp TGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCCCACTCCACAAAAACTaGTTGGCTGCAAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRVVTVFWSPWHPRSVHRPLHKN*LAAKKA
Trigger: TGCCTTCTTTGCAGCCAAGCAGTTTTTGTGGAGTGG...GCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACCCGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTACCCCTCCGCAGCGGTaGGATCCGAGCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLTPPQR*DPSHSL
Trigger: GAGGCTGTGGCTCGGATCCCACCGCTGCGGAGGGGT...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGTGGCACACCCAGCTTaGGTACAGCCCGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLVAHPA*VQPGEA
Trigger: GGCCTCCCCGGGCTGTACCCAAGCTGGGTGTGCCAC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGAGTGGTGTCGGGCAGTaGGGCGGGAATCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTSGVGQ*GGNQAP
Trigger: CGGCGCCTGATTCCCGCCCCACTGCCCGACACCACT...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCATGGTGTACGACTTaGCCAGGCTCATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLRLLSETPVLHRNPSASSWCTT*PGSCGQ
Trigger: TTGGCCACATGAGCCTGGGCAAGTCGTACACCATGA...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCCCAGGGTCAAGCCCTaGCAGCGAGTCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLPRVKP*QRVGAE
Trigger: TTCAGCCCCGACTCGCTGGCAGGGCTTGACCCTGGG...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGGGTCCACCTCAAACTaGTCCAGCCAGCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLGSTSN*SSQRPG
Trigger: GCCTGGCCGCTGGCTGGAGCAGTTTGAGGTGGACCC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGCTGCTGCAGGTGTGTaGCGCAGACGTCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLAAAGV*RRRHSG
Trigger: GCCGCTGTGACGTCTGCGCCACACACCTGCAGCAGC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCTGGAGTGGATGGTCTaGGCTGCGGATGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTLEWMV*AADAHR
Trigger: GCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGAGCTGGACCGTGTGTaGGGCTGGAGGGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLELDRV*GWRVAH
Trigger: GTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGCTGCCACCGCTGTaGTGGAAAAGGGCGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLLLPPL*WKRAVR
Trigger: CCGCACCGCCCTTTTCCACCACAGCGGTGGCAGCAG...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAACGCTGCCATGGCCGCTaGTGTAGCGCTGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKRCHGR*CSAGAA
Trigger: GGCGGCCCCAGCGCTACAGCAGCGGCCATGGCAGCG...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGCCTGCTCGGAGTCCTaGGGGAAGACGGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTACSES*GKTASK
Trigger: CTTCGATGCCGTCTTCCCCCAGGACTCCGAGCAGGC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGACGATGCCCAGGCTCTaGGGTGAGCTGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTTMPRL*GELSFP
Trigger: CGGGAAGGACAGCTCACCCCAGAGCCTGGGCATCGT...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGGTCACCCCAGACAATaGCCTTGCAGGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTGHPRQ*PCRAQG
Trigger: CCCCTGAGCCCTGCAAGGCCATTGTCTGGGGTGACC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGCACGGACCCCAGGTTaGCCCAGGACTGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTARTPG*PRTVRS
Trigger: AGACCTGACAGTCCTGGGCCAACCTGGGGTCCGTGC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTTTCCGGGGGAGGCTaGAGTGGATGGTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTVSGGG*SGWSGL
Trigger: CAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAAC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCAGACCCTTCTTGCTaGTGGGGGAGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPDPSC*WGRPSG
Trigger: GCCTGAAGGCCTCCCCCACCAGCAAGAAGGGTCTGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTGGTGACGGTCTTCTaGTCACCCTGGCACCCTCGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTVVTVF*SPWHPR
Trigger: GCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCAC...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAGCCGGGTTCACAGCATaGGGAGGGGCCGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQAGFTA*GGAEAG
Trigger: CCCGGCCTCGGCCCCTCCGCATGCTGTGAACCCGGC...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGAGCTGGAGGCGTACTTaGCCTTCTTCCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTSWRRT*PSSCAG
Trigger: GCCTGCGCAGGAAGAAGGCCAAGTACGCCTCCAGCT...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCGAACACAACTTCTGCTaGTGTCTCAAGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPEHNFC*CLKSVA
Trigger: TGCTACAGACTTGAGACACCAGCAGAAGTTGTGTTC...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCTTCACCTTCCCGATaGTGCCAGGGTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPSPSR*CQGCPW
Trigger: CCAAGGACAACCCTGGCAGCATCGGGAAGGTGAAGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAGGTGGAAAAGGGCGGTaGGGCCCATGGCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQGGKGR*GPWRAA
Trigger: TGCCGCCCGCCATGGGCCGCACCGCCCTTTTCCACC...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGCTGAACACAACTTCTaGTGGTGTCTCAAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVAEHNF*WCLKSV
Trigger: TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAAGGTCCCGCAGGCTCTaGTCGCGCCCGCACACCTCC +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQRSRRL*SRPHTS
Trigger: GGAGGTGTGCGGGCGCGACCAGAGCCTGCGGGACCT...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCAGCAGAAGCTGCCTaGGTATCACACTCCCCTACC +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPAEAA*VSHSPT
Trigger: GGTAGGGGAGTGTGATACCCAGGCAGCTTCTGCTGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CAA 72 bp GGAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTaGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: GEKSKSRSKALA*LSGGDGLLVTL
Trigger: CAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAGGGGGTGACCAGGGCTaGCGTGCAGACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQGGDQG*RADSTT
Trigger: CGTGGTGGAGTCTGCACGTCAGCCCTGGTCACCCCC...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAACCAGCTCGTCCTGGCTaGCTCCCTGCAGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQPARPG*LPAGPA
Trigger: AGCGGGTCCTGCAGGGAGGCAGCCAGGACGAGCTGG...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAAGTCGGTGGGGTAGGTaGAGGTGCCGCGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQSRWGR*RCRGWL
Trigger: CAGCCACCCGCGGCACCTCCACCTACCCCACCGACT...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTGCTGCAGCGGAAGTaGTCTGCGTCTCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKVLQRK*SASRGP
Trigger: GGGTCCCCGAGACGCAGACCACTTCCGCTGCAGCAC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAATGCCCACGGCCTTCCTaGGGGATGCAGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKCPRPS*GMQPLV
Trigger: CACCAGAGGCTGCATCCCCCAGGAAGGCCGTGGGCA...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR TCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAACGGGCCCCACGTAGATaGCCGTGTCACAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKRAPRR*PCHRTA
Trigger: AGCAGTCCTGTGACACGGTCATCTACGTGGGGCCCG...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAACTGAGTGTCTCTGCGTaGTGGGCTGGCGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKLSVSA*WAGASD
Trigger: GTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAG...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGGTGCTGAGTGTCTCTaGGTGCTGGGCTGGCGCATC +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKGAECL*VLGWRI
Trigger: GATGCGCCAGCCCAGCACGCAGAGACACTCAGCACC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGCAGCGGAAGTGGTCTaGGTCTCGGGGACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKAAEVV*VSGTLG
Trigger: TCCAAGGGTCCCCGAGACGCAGACCACTTCCGCTGC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAAGCTCCACTGGCCGCTaGAGGGTCACTGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKSSTGR*RVTVVV
Trigger: CACCACCACAGTGACCCTGCAGCGGCCAGTGGAGCT...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGCAGCCCGGAGCGCCTaGTTTGTGCCCATGACGGTA +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKAARSA*FVPMTV
Trigger: TACCGTCATGGGCACAAAGCAGGCGCTCCGGGCTGC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAAACAACATGTGGGAGCTaGGTCGGGCGTCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQTTCGS*VGRPRH
Trigger: GTGGCGAGGACGCCCGACGCAGCTCCCACATGTTGT...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAACCGTCCACCACTCTCTaGGCACAGGCTAGCATCACC +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKPSTTL*AQASIT
Trigger: GGTGATGCTAGCCTGTGCCCAGAGAGTGGTGGACGG...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CCA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCCCATCTTTGTTGTTaGTCGTGGTGGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPHLCC*SWWSVL
Trigger: CAAAACAGACCACCACGACCAACAACAAAGATGGGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
3UTR CAA 72 bp AAAAGGGAGAAAAGTCCAAATCAAGGTCAAAGGCACTaGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KREKSPNQGQRH*RCCRVVTVFWS
Trigger: TGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTAGACGTCCTATGCTATaGACGATCCTCAGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: KSKSRSKALALLSGGDGLRRPML*TILRKY
Trigger: ATACTTTCTGAGGATCGTGCATAGCATAGGACGTCT...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGCCAGGCTGAGCTTCTaGATAGCCCTTATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKARLSF*IALMKK
Trigger: CTTCTTCATAAGGGCTATGCAGAAGCTCAGCCTGGC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR GCA 90 bp CACAACTTCTGCTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCTGTAGCACCAAATaGAAAAGGGAGAAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HNFCWCLKSVAPNAKGRKVCSTK*KREKSP
Trigger: TGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGAC...TTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAGCAGAAGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 90 bp CACCGGGCAGGCAGGGAGGCGTGCGGTCGGGGTCCAGGGCCACAGTaGGTGGGTGGAAGGGCCGCAGGTGCGGGGGCCGACGGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HRAGREACGRGPGPQ*VGGRAAGAGADGPG
Trigger: GCCGGGCCCGTCGGCCCCCGCACCTGCGGCCCTTCCACCCACGCACTGTGGCCCTGGACCCCGACCGCACGCCTCCCTGCCTGCCCGGTG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGCTTCGTGTGGCAGTGGCGGCACCAGCCGCCTCCGCCGGCCGAGTaGCCCTGCTCTGGGCCGGCCCCGGCGCCTTCGGGAGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SFVWQWRHQPPPPAE*PCSGPAPAPSGAGR
Trigger: CCGCCCTGCTCCCGAAGGCGCCGGGGCCGGCCCAGAGCAGGGCCACTCGGCCGGCGGAGGCGGCTGGTGCCGCCACTGCCACACGAAGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GGGCAGGCAGGGAGGCGTGCGGTCGGGGTCCAGGGCCACAGTGCGTaGGTGGAAGGGCCGCAGGTGCGGGGGCCGACGGGCCCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GQAGRRAVGVQGHSA*VEGPQVRGPTGPAF
Trigger: GAAGGCCGGGCCCGTCGGCCCCCGCACCTGCGGCCCTTCCACCCACGCACTGTGGCCCTGGACCCCGACCGCACGCCTCCCTGCCTGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GGCCAGCCTTCGCCCCGACACTGGGCCCGGCCCGTGGGGCTGCTCTaGGACCGGCCACAGGGCCGCCAGGGCTCCTGCCCGTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: GQPSPRHWARPVGLL*DRPQGRQGSCPSQR
Trigger: CCTCTGTGACGGGCAGGAGCCCTGGCGGCCCTGTGGCCGGTCCCAGAGCAGCCCCACGGGCCGGGCCCAGTGTCGGGGCGAAGGCTGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CGACCCGCGCCGGGTTCACAGCATGCGGAGGGGCCGAGGCCGGGCTaGTCCTCTGCTCCAGGCTGGACTTCCGCGTGGGTGGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: RPAPGSQHAEGPRPG*SSAPGWTSAWVGPG
Trigger: CCCCGGCCCCACCCACGCGGAAGTCCAGCCTGGAGCAGAGGAGCAGCCCGGCCTCGGCCCCTCCGCATGCTGTGAACCCGGCGCGGGTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGGCAGGGAGGCGTGCGGTCGGGGTCCAGGGCCACAGTGCGTGGGTaGAAGGGCCGCAGGTGCGGGGGCCGACGGGCCCGGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RQGGVRSGSRATVRG*KGRRCGGRRARPSS
Trigger: TGAGGAAGGCCGGGCCCGTCGGCCCCCGCACCTGCGGCCCTTCCACCCACGCACTGTGGCCCTGGACCCCGACCGCACGCCTCCCTGCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CCTCGGTTTCCGGGGGAGGCTGGAGTGGATGGTCTGGGCTGCGGATaGCCACCGCGAGGGCCCGGCCTGGGGCTCCCTGCCGGGTCGGGA +
Preference number: 5 (lower is better)
Translates to: PRFPGEAGVDGLGCG*PPRGPGLGLPAGSG
Trigger: TCCCGACCCGGCAGGGAGCCCCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp GGGAGCTGCGTCGGGCGTCCTCGCCACAGCCCGCTCGGCTGGTGCTaGGGGCCGCCAGGGCCGCATCCAGGTAGAAAGCCGCCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: GSCVGRPRHSPLGWC*GPPGPHPGRKPPSR
Trigger: CCGAGAAGGCGGCTTTCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGACGCAGCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GGGCCCGTGGGTGGCCGCTCCTCCCCCACGTTCACGCCGCTGTCATaGCCGCTGTCTGAGTCCGCCGAGCCCCACGAGGAGCCACCTCGG +
Preference number: 5 (lower is better)
Translates to: GPVGGRSSPTFTPLS*PLSESAEPHEEPPR
Trigger: CCGAGGTGGCTCCTCGTGGGGCTCGGCGGACTCAGACAGCGGCCATGACAGCGGCGTGAACGTGGGGGAGGAGCGGCCACCCACGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GGCGGTCACCTTGCTGTAGGGGGAGGGCAGGGCCGGGCCCGTGGGTaGCCGCTCCTCCCCCACGTTCACGCCGCTGTCATGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: GGHLAVGGGQGRARG*PLLPHVHAAVMAAV
Trigger: GACAGCGGCCATGACAGCGGCGTGAACGTGGGGGAGGAGCGGCCACCCACGGGCCCGGCCCTGCCCTCCCCCTACAGCAAGGTGACCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGGGGCCCCCACAGCCTaGGCTGCGCCGCTCCTACAG +
Preference number: 5 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLGAPTA*AAPLLQ
Trigger: CTGTAGGAGCGGCGCAGCCAAGGCTGTGGGGGCCCC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS TCA 90 bp CATGGACGCGGCTGTGAGCAGCCCGGAGCGCCTGCTTTGTGCCCATaGCGGTACCCCGGCCAGCCTTCGCCCCGACACTGGGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: HGRGCEQPGAPALCP*RYPGQPSPRHWARP
Trigger: GGGCCGGGCCCAGTGTCGGGGCGAAGGCTGGCCGGGGTACCGTCATGGGCACAAAGCAGGCGCTCCGGGCTGCTCACAGCCGCGTCCATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 90 bp CGCCGAGCCCCACGAGGAGCCACCTCGGCCCGGGGCTCCACTGGCTaGCAGCTCATGGACGCGGCTGTGAGCAGCCCGGAGCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RRAPRGATSARGSTG*QLMDAAVSSPERLL
Trigger: AAGCAGGCGCTCCGGGCTGCTCACAGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCCGGGCCGAGGTGGCTCCTCGTGGGGCTCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp ATGCAGCCTCTGGTGGCGAGGGCTTCCGGCCCCCTCGGGCGGGGCTaGCCTGAGCTCCGTCGGTGCCACCTGGACCTCCTGAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: MQPLVARASGPLGRG*PELRRCHLDLLRDP
Trigger: AGGGTCCCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGCCCCGCCCGAGGGGGCCGGAAGCCCTCGCCACCAGAGGCTGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GCAGAGGCAGTCCTCGGTTTCCGGGGGAGGCTGGAGTGGATGGTCTaGGCTGCGGATGCCCACCGCGAGGGCCCGGCCTGGGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: AEAVLGFRGRLEWMV*AADAHREGPAWGSL
Trigger: CAGGGAGCCCCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGGACTGCCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp CGGGTGGTGGCAGAGGCAGTCCTCGGTTTCCGGGGGAGGCTGGAGTaGATGGTCTGGGCTGCGGATGCCCACCGCGAGGGCCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RVVAEAVLGFRGRLE*MVWAADAHREGPAW
Trigger: CCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGCTGGCGTTGTCACACCCAGCGTGGTGGCACCCCTCCGCAGCGGTaGGATCCGAGCCACAGCCTCTGGCCTGCGGGCCGCCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SWRCHTQRGGTPPQR*DPSHSLWPAGRPGC
Trigger: GCAGCCAGGGCGGCCCGCAGGCCAGAGGCTGTGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp TGGCTGCGCCGCTCCTACAGGCGGGAGCTGGACCGTGTGTGGGGCTaGAGGGTGGCACACCCAGCTTGGGTACAGCCCGGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: WLRRSYRRELDRVWG*RVAHPAWVQPGEAA
Trigger: GGCGGCCTCCCCGGGCTGTACCCAAGCTGGGTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGTCCGCCGAGCCCCACGAGGAGCCACCTCGGCCCGGGGCTCCACTaGCTGACAGCTCATGGACGCGGCTGTGAGCAGCCCGGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: SPPSPTRSHLGPGLH*LTAHGRGCEQPGAP
Trigger: AGGCGCTCCGGGCTGCTCACAGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCCGGGCCGAGGTGGCTCCTCGTGGGGCTCGGCGGACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTGGGGCTTCCCGGCCCTaGCTGCTGCTGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCGASRP*LLLCAR
Trigger: CCTGGCGCACAGCAGCAGCAAGGGCCGGGAAGCCCC...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS TCA 90 bp CCGCCACCGCTGCCTCGGCCAGGCACGCCGGCGGGAGGAAGCTGTTaGCCCGCGAGACACTCCACATGCCCTCCAGGCACTGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PPPLPRPGTPAGGSC*PARHSTCPPGTAGP
Trigger: AGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGCCGGCGTGCCTGGCCGAGGCAGCGGTGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp TGTGGGAGCTGCGTCGGGCGTCCTCGCCACAGCCCGCTCGGCTGGTaGTGCGGGCCGCCAGGGCCGCATCCAGGTAGAAAGCCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CGSCVGRPRHSPLGW*CGPPGPHPGRKPPS
Trigger: AGAAGGCGGCTTTCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGACGCAGCTCCCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp TGGGTACAGCCCGGGGAGGCCGCCCAGGGGCTTCCCGGCCCTTGCTaGTGCTGTGCGCCAGGCCTTCGTACCGCTCCAGAGACGCGTGTC +
Preference number: 5 (lower is better)
Translates to: WVQPGEAAQGLPGPC*CCAPGLRTAPETRV
Trigger: GACACGCGTCTCTGGAGCGGTACGAAGGCCTGGCGCACAGCAGCAGCAAGGGCCGGGAAGCCCCTGGGCGGCCTCCCCGGGCTGTACCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp GCTTGGGTACAGCCCGGGGAGGCCGCCCAGGGGCTTCCCGGCCCTTaGTGCTGCTGTGCGCCAGGCCTTCGTACCGCTCCAGAGACGCGT +
Preference number: 5 (lower is better)
Translates to: AWVQPGEAAQGLPGP*CCCAPGLRTAPETR
Trigger: ACGCGTCTCTGGAGCGGTACGAAGGCCTGGCGCACAGCAGCAGCAAGGGCCGGGAAGCCCCTGGGCGGCCTCCCCGGGCTGTACCCAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CCCACCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTaGACGCCCCCTCCTCTTGTCCGGCGCCCAGCCTCAGACGTCCAC +
Preference number: 5 (lower is better)
Translates to: PTTSSLRPTSRPPAR*TPPPLVRRPASDVH
Trigger: GTGGACGTCTGAGGCTGGGCGCCGGACAAGAGGAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp ACATGTGGGAGCTGCGTCGGGCGTCCTCGCCACAGCCCGCTCGGCTaGTGCTGCGGGCCGCCAGGGCCGCATCCAGGTAGAAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: TCGSCVGRPRHSPLG*CCGPPGPHPGRKPP
Trigger: AGGCGGCTTTCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGACGCAGCTCCCACATGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp TGGTGGCAGAGGCAGTCCTCGGTTTCCGGGGGAGGCTGGAGTGGATaGTCTGGGCTGCGGATGCCCACCGCGAGGGCCCGGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: WWQRQSSVSGGGWSG*SGLRMPTARARPGA
Trigger: AGCCCCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCGGCGGGAGGAAGCTGTaGACCCGCGAGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGGGRKL*TRETLH
Trigger: GTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGCC...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS TCA 90 bp CCTCGGCCCGGGGCTCCACTGGCTGACAGCTCATGGACGCGGCTGTaGGCAGCCCGGAGCGCCTGCTTTGTGCCCATGACGGTACCCCGG +
Preference number: 5 (lower is better)
Translates to: PRPGAPLADSSWTRL*AARSACFVPMTVPR
Trigger: CCGGGGTACCGTCATGGGCACAAAGCAGGCGCTCCGGGCTGCTCACAGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCCGGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CTGGCAGGGGCCTGCAGCAGGTGCATGGCCTCCCGTGTGAGCTGCTaGAGGTGTGTGGCGCAGACGTCACAGCGGCGCTCGGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LAGACSRCMASRVSC*RCVAQTSQRRSASG
Trigger: CCCAGAGGCCGAGCGCCGCTGTGACGTCTGCGCCACACACCTGCAGCAGCTCACACGGGAGGCCATGCACCTGCTGCAGGCCCCTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp GGCCTGGATGGTGACCGTGCTCAGCGCCCCTCCAAGACCCGCAGGTaGTACAGACACCTGGACACTGGGCCCGGGGGACCAGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GLDGDRAQRPSKTRR*YRHLDTGPGGPGQP
Trigger: GGGCTGGCCTGGTCCCCCGGGCCCAGTGTCCAGGTGTCTGTAGCACCTGCGGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp AGGGCTTCCGGCCCCCTCGGGCGGGGCTGGCCTGAGCTCCGTCGGTaGCACCTGGACCTCCTGAGGGACCCTCGTTGCCGTCCATGCATT +
Preference number: 5 (lower is better)
Translates to: RASGPLGRGWPELRR*HLDLLRDPRCRPCI
Trigger: AATGCATGGACGGCAACGAGGGTCCCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGCCCCGCCCGAGGGGGCCGGAAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp CTTGGGAACTGCAGCAGTGGCGGCTCGCCGGGGGCCTGCGCTGCCTaGGGGACCGGCGGCGGGATCGTAGAGGATCACCTGCTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: LGNCSSGGSPGACAA*GTGGGIVEDHLLLP
Trigger: CGGAAGAAGCAGGTGATCCTCTACGATCCCGCCGCCGGTCCCCCAGGCAGCGCAGGCCCCCGGCGAGCCGCCACTGCTGCAGTTCCCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp CAGCCTTGGCTGCGCCGCTCCTACAGGCGGGAGCTGGACCGTGTGTaGGGCTGGAGGGTGGCACACCCAGCTTGGGTACAGCCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: QPWLRRSYRRELDRV*GWRVAHPAWVQPGE
Trigger: CTCCCCGGGCTGTACCCAAGCTGGGTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAGCCAAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCGGGAGGAAGCCCGCCTaGGGAGCCAGACCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLGRKPA*GARPFL
Trigger: CAAGAAGGGTCTGGCTCCCAAGGCGGGCTTCCTCCC...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCTTCTTGGGGGACTaGAGGCTGCGGGTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCLFLGD*RLRVRA
Trigger: CGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAGAG...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS TCA 90 bp TCTTCCTGCGCAGGCGGTGGATGCGGGCGGCGAGCTGCACGGTGCTaGGTGTCTCTGCGTGCTGGGCTGGCGCATCCGACACGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: SSCAGGGCGRRAARC*VSLRAGLAHPTRGR
Trigger: TCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 90 bp TCGGGCGGGGCTGGCCTGAGCTCCGTCGGTGCCACCTGGACCTCCTaGGGGACCCTCGTTGCCGTCCATGCATTCCAGCCGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGGAGLSSVGATWTS*GTLVAVHAFQPLLQ
Trigger: CTGCAGGAGCGGCTGGAATGCATGGACGGCAACGAGGGTCCCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGCCCCGCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp TGGCTGGCAGGGGCCTGCAGCAGGTGCATGGCCTCCCGTGTGAGCTaGTGCAGGTGTGTGGCGCAGACGTCACAGCGGCGCTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: WLAGACSRCMASRVS*CRCVAQTSQRRSAS
Trigger: AGAGGCCGAGCGCCGCTGTGACGTCTGCGCCACACACCTGCAGCAGCTCACACGGGAGGCCATGCACCTGCTGCAGGCCCCTGCCAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CAGCCCCTTGGTCCTGTCTGGCCCAGCTCGTCCTGGCTGCCTCCCTaGAGGACCCGCTGGTCCTGGCGTGTCCCTCGAGCTGGTCGTGGT +
Preference number: 5 (lower is better)
Translates to: QPLGPVWPSSSWLPP*RTRWSWRVPRAGRG
Trigger: ACCACGACCAGCTCGAGGGACACGCCAGGACCAGCGGGTCCTGCAGGGAGGCAGCCAGGACGAGCTGGGCCAGACAGGACCAAGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CGGTGGATGCGGGCGGCGAGCTGCACGGTGCTGAGTGTCTCTGCGTaGTGGGCTGGCGCATCCGACACGTGGGCGATCATGGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: RWMRAASCTVLSVSA*WAGASDTWAIMVVR
Trigger: CCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CCTTCAGGCTGGACGTGGCCCTGGGGACAGAGTGGTCAGCCCGGCTaGTGGGTCTGGGCTCCTCCTCCCCTCGAAGGACAGCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PSGWTWPWGQSGQPG*WVWAPPPLEGQQQP
Trigger: GGGCTGCTGCTGTCCTTCGAGGGGAGGAGGAGCCCAGACCCAGCAGCCGGGCTGACCACTCTGTCCCCAGGGCCACGTCCAGCCTGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp TCCAGCATCAGCCGGCCCTGGGTCTCGGCCAGCTCCTCACACAGGTaGTTGTGCTTGGCCTGCACCTCCCGCAGCCGCTGCTGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: SSISRPWVSASSSHR*LCLACTSRSRCCLR
Trigger: GCGCAGGCAGCAGCGGCTGCGGGAGGTGCAGGCCAAGCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp CGAGCAGGCCACCACCTCCGTGGGAGCATCTCCCCAGGACACAGCTaGCGTTGTCACACCCAGCGTGGTGGCACCCCTCCGCAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: RAGHHLRGSISPGHS*RCHTQRGGTPPQRW
Trigger: CCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAGATGCTCCCACGGAGGTGGTGGCCTGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp GGTGGACACAAACACAACCGGCGCCAGCCCCGGCCCGGACAGGCGCAGCGGGGCCCAGGTGCTGGTAGCTaGTCGAGAAGCAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GGHKHNRRQPRPGQAQRGPGAGS*SRSRAE
Trigger: CTCTGCCCTGCTTCTCGACAAGCTACCAGCACCTGG...GCCCCGCTGCGCCTGTCCGGGCCGGGGCTGGCGCCGGTTGTGTTTGTGTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 90 bp ACATCTTGGGAACTGCAGCAGTGGCGGCTCGCCGGGGGCCTGCGCTaGCTGGGGGACCGGCGGCGGGATCGTAGAGGATCACCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TSWELQQWRLAGGLR*LGDRRRDRRGSPAS
Trigger: AGAAGCAGGTGATCCTCTACGATCCCGCCGCCGGTCCCCCAGGCAGCGCAGGCCCCCGGCGAGCCGCCACTGCTGCAGTTCCCAAGATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGCAGCCATGGGTCCTCAAACAGGCCTCCACGGCCAGGTGGGCTCTaGCCCAGGCGAGCACAGCCCACACGGGTGGTGGCAGAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SSHGSSNRPPRPGGL*PRRAQPTRVVAEAV
Trigger: GACTGCCTCTGCCACCACCCGTGTGGGCTGTGCTCGCCTGGGCCAGAGCCCACCTGGCCGTGGAGGCCTGTTTGAGGACCCATGGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GAGCATCTCCCCAGGACACAGCTGGCGTTGTCACACCCAGCGTGGTaGCACCCCTCCGCAGCGGTGGGATCCGAGCCACAGCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: EHLPRTQLALSHPAW*HPSAAVGSEPQPLA
Trigger: GGCCAGAGGCTGTGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAGATGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GGTGTGCTGCTTCTACCTTGCTGGCCCGGGCCTTCAGGCTGGACGTaGCCCTGGGGACAGAGTGGTCAGCCCGGCTGCTGGGTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GVLLLPCWPGPSGWT*PWGQSGQPGCWVWA
Trigger: AGCCCAGACCCAGCAGCCGGGCTGACCACTCTGTCCCCAGGGCCACGTCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCACATCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTGCACGCCCCCTCTCCTCACACAGGTGCTaGTGCTTGGCCTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PHPRSVPRPVLQPAARPLSSHRC*CLACTS
Trigger: GGAGGTGCAGGCCAAGCACAAGCACCTGTGTGAGGA...GAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGATGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGGCACGCCCCCTCCTCTaGTCCGGCGCCCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEARPLL*SGAQPQ
Trigger: CTGAGGCTGGGCGCCGGACAAGAGGAGGGGGCGTGC...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 90 bp TACTTGGCCTTCTTCCTGCGCAGGCGGTGGATGCGGGCGGCGAGCTaGACGGTGCTGAGTGTCTCTGCGTGCTGGGCTGGCGCATCCGAC +
Preference number: 5 (lower is better)
Translates to: YLAFFLRRRWMRAAS*TVLSVSACWAGASD
Trigger: GTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAAGAAGGCCAAGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp GTGTCTCTGCGTGCTGGGCTGGCGCATCCGACACGTGGGCGATCATaGTGGTGCGGCAGCCAGCGGTGGCCAGGGATTCACGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VSLRAGLAHPTRGRS*WCGSQRWPGIHAAA
Trigger: TGCTGCTGCGTGAATCCCTGGCCACCGCTGGCTGCCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp CCAGAGGAGCTGGAGGCGTACTTGGCCTTCTTCCTGCGCAGGCGGTaGATGCGGGCGGCGAGCTGCACGGTGCTGAGTGTCTCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: PEELEAYLAFFLRRR*MRAASCTVLSVSAC
Trigger: GCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAAGAAGGCCAAGTACGCCTCCAGCTCCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp TGGGAGCATCTCCCCAGGACACAGCTGGCGTTGTCACACCCAGCGTaGTGGCACCCCTCCGCAGCGGTGGGATCCGAGCCACAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: WEHLPRTQLALSHPA*WHPSAAVGSEPQPL
Trigger: CAGAGGCTGTGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAGATGCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCCCGGCCCGGACAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTTTCCACGCCTGTCGCTaGAGCTCCACCAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: PRPGQAQRGRAEHNFCWCFHACR*SSTSFV
Trigger: CACGAAGCTGGTGGAGCTCAAGCGACAGGCGTGGAA...ACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTGTCCGGGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGACCAGGCCAGCCCCTaGGTCCTGTCTGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLDQASP*VLSGPA
Trigger: AGCTGGGCCAGACAGGACCAAGGGGCTGGCCTGGTC...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 90 bp CCTCCTGAGGGACCCTCGTTGCCGTCCATGCATTCCAGCCGCTCCTaGAGCTCCGCGAAGGTGCTGCAGCGGAAGTGGTCTGCGTCTCGG +
Preference number: 5 (lower is better)
Translates to: PPEGPSLPSMHSSRS*SSAKVLQRKWSASR
Trigger: CCGAGACGCAGACCACTTCCGCTGCAGCACCTTCGCGGAGCTGCAGGAGCGGCTGGAATGCATGGACGGCAACGAGGGTCCCTCAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp GCCTTCGTACCGCTCCAGAGACGCGTGTCCGGCAAGACGGTGTGCTaGTTCTACCTTGCTGGCCCGGGCCTTCAGGCTGGACGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: AFVPLQRRVSGKTVC*FYLAGPGLQAGRGP
Trigger: AGGGCCACGTCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGACACGCGTCTCTGGAGCGGTACGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp CAGGCCTTCGTACCGCTCCAGAGACGCGTGTCCGGCAAGACGGTGTaGTGCTTCTACCTTGCTGGCCCGGGCCTTCAGGCTGGACGTGGC +
Preference number: 5 (lower is better)
Translates to: QAFVPLQRRVSGKTV*CFYLAGPGLQAGRG
Trigger: GCCACGTCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGACACGCGTCTCTGGAGCGGTACGAAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp AAGCAGGTGACCATCATGACGTGCGCCTTGCACAGGTTCACGCACTaGTCCAGGGCCGCCGTGGCTCGCTCCAGGGCCGCCAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: KQVTIMTCALHRFTH*SRAAVARSRAARYS
Trigger: CGAGTACCTGGCGGCCCTGGAGCGAGCCACGGCGGCCCTGGAGCAGTGCGTGAACCTGTGCAAGGCGCACGTCATGATGGTCACCTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp TTGACCCGCGAGACACTCCACATGCCCTCCAGGCACTGCTGGGCCTaGATGGTGACCGTGCTCAGCGCCCCTCCAAGACCCGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LTRETLHMPSRHCWA*MVTVLSAPPRPAGA
Trigger: AGCACCTGCGGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp ACGGTGCTGAGTGTCTCTGCGTGCTGGGCTGGCGCATCCGACACGTaGGCGATCATGGTGGTGCGGCAGCCAGCGGTGGCCAGGGATTCA +
Preference number: 5 (lower is better)
Translates to: TVLSVSACWAGASDT*AIMVVRQPAVARDS
Trigger: TGAATCCCTGGCCACCGCTGGCTGCCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp TCAAACTGCTCCAGCCAGCGGCCAGGCTCCAGCATCAGCCGGCCCTaGGTCTCGGCCAGCTCCTCACACAGGTGCTTGTGCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SNCSSQRPGSSISRP*VSASSSHRCLCLAC
Trigger: GCAGGCCAAGCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCTGGAGCCTGGCCGCTGGCTGGAGCAGTTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCCCGATGCTGCCAGGGTaGTCCTTGGTCTTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGPMLPG*SLVLEA
Trigger: CGCCTCCAAGACCAAGGACAACCCTGGCAGCATCGG...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GCCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCCCCCAGACAATGGCCTaGCAGGGCTCAGGGGTACCC +
Preference number: 5 (lower is better)
Translates to: ALVSCPRDRAGSREGRGLPQTMA*QGSGVP
Trigger: GGGTACCCCTGAGCCCTGCAAGGCCATTGTCTGGGG...GAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGACTAGGCCACGGCCCTaGCCTCCACCAACAGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVSCPRDRAGSREGRGLETRPRP*PPPTGG
Trigger: GCCCCCTGTTGGTGGAGGCAAGGGCCGTGGCCTAGT...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS TCA 90 bp GCGAGACACTCCACATGCCCTCCAGGCACTGCTGGGCCTGGATGGTaGCCGTGCTCAGCGCCCCTCCAAGACCCGCAGGTGCTACAGACA +
Preference number: 5 (lower is better)
Translates to: ARHSTCPPGTAGPGW*PCSAPLQDPQVLQT
Trigger: TGTCTGTAGCACCTGCGGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 90 bp AGGAAGCTGTTGACCCGCGAGACACTCCACATGCCCTCCAGGCACTaGTGGGCCTGGATGGTGACCGTGCTCAGCGCCCCTCCAAGACCC +
Preference number: 5 (lower is better)
Translates to: RKLLTRETLHMPSRH*WAWMVTVLSAPPRP
Trigger: GGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AAGCTGTTGACCCGCGAGACACTCCACATGCCCTCCAGGCACTGCTaGGCCTGGATGGTGACCGTGCTCAGCGCCCCTCCAAGACCCGCA +
Preference number: 5 (lower is better)
Translates to: KLLTRETLHMPSRHC*AWMVTVLSAPPRPA
Trigger: TGCGGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 90 bp AGCAGAAGCTGCCTGGGTATCACACTCCCCTACCCGGAGCAGCCATaGGTCCTCAAACAGGCCTCCACGGCCAGGTGGGCTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRSCLGITLPYPEQP*VLKQASTARWALAQ
Trigger: CTGGGCCAGAGCCCACCTGGCCGTGGAGGCCTGTTTGAGGACCCATGGCTGCTCCGGGTAGGGGAGTGTGATACCCAGGCAGCTTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CCCTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGTCAGGCGGACCTTCGTaGTCGGTGAGCTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: PLLAALGTERVLGKGGDSSGGPS*SVSSRS
Trigger: AGACCGGGAGCTCACCGACAACGAAGGTCCGCCTGA...CGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGCCTGAGGGACCCTCGTaGCCGTCCATGCATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LVSCPRDRAGSREGRGLEPEGPS*PSMHSS
Trigger: GCTGGAATGCATGGACGGCAACGAGGGTCCCTCAGG...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GGTGGTGACGGTCTTCTGGTCACCCTGGCACCCTCGCTCTGTCCACCGCGTGGCATCATGACGTGCGCCTaGCACAGGTTCACGCACTGC +
Preference number: 5 (lower is better)
Translates to: GGDGLLVTLAPSLCPPRGIMTCA*HRFTHC
Trigger: GCAGTGCGTGAACCTGTGCAAGGCGCACGTCATGAT...GCCACGCGGTGGACAGAGCGAGGGTGCCAGGGTGACCAGAAGACCGTCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp ACACTCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCGGGTTGTCCTTGGTCTaGGAGGCGGCCCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TLRLLSETPVLHRNPSASGLSLV*EAALSR
Trigger: CCTGCTCAGGGCCGCCTCCAAGACCAAGGACAACCC...GGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTCTGGTCACCCTGGCTGCCAGGGTTGTCCTaGGTCTTGGAGGCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GQRHLRCCRVVTVFWSPWLPGLS*VLEAAL
Trigger: CAGGGCCGCCTCCAAGACCAAGGACAACCCTGGCAG...CCAGGGTGACCAGAAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCTGTGCTGCTTCTACCTaGCTGGCCCGGGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPCAAST*LARAFR
Trigger: CCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACA...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 90 bp CACTCACTGCAGCCTTTTCCGGGACCAGCAGCTCAGGCCAAGCGCTaGTGTCCTCTCTCTGGTCACCCCAGACAATGGCCTTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: HSLQPFPGPAAQAKR*CPLSGHPRQWPCRA
Trigger: AGCCCTGCAAGGCCATTGTCTGGGGTGACCAGAGAGAGGACAGCAGCGCTTGGCCTGAGCTGCTGGTCCCGGAAAAGGCTGCAGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS-3UTR CAA 90 bp CAGGCGCAGCGGGGCCGGGCTGAACACAACTTCTGCTGGTGTCTCAAGTCTGTAGAGCTGGAGGCGTACTaGGCCTTCTTCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QAQRGRAEHNFCWCLKSVELEAY*AFFLRR
Trigger: CCTGCGCAGGAAGAAGGCCAAGTACGCCTCCAGCTC...TACAGACTTGAGACACCAGCAGAAGTTGTGTTCAGCCCGGCCCCGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGTCGAAGGCAAACATCTaGGGAACTGCAGCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: LVSCPRDRAGSREGRGLESKANI*GTAAVA
Trigger: CGCCACTGCTGCAGTTCCCAAGATGTTTGCCTTCGA...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTTGTTAGCTGCCCTCGGGACAGAGCGGGTTCTCGGGAAGGGAGGGGACTCGAGTCGATCTCGTACACCTaGATCTCGAACGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LVSCPRDRAGSREGRGLESISYT*ISNGSF
Trigger: GAAGGAGCCGTTCGAGATCAAGGTGTACGAGATCGA...CTCGAGTCCCCTCCCTTCCCGAGAACCCGCTCTGTCCCGAGGGCAGCTAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTGGCACGGACCCCAGGTaGGCCCAGGACTGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: KSKSRSKALALLSGGDGLGTDPR*AQDCQV
Trigger: GACCTGACAGTCCTGGGCCAACCTGGGGTCCGTGCC...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCCTGTGGCCCTCTTCTaGGGGGACTTGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTPVALF*GDLRLR
Trigger: CCGCAGCCTCAAGTCCCCCAAGAAGAGGGCCACAGG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGCGATACGGCACATGCTaGGCTCCGTTGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTRYGTC*APLTRA
Trigger: GGCCCTGGTCAACGGAGCCAAGCATGTGCCGTATCG...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp TCCGTCTCCTCTCTGAGACTCCCGTCCTGCACAGAAACCCCTCCGCATCCTCCCGCGTCAAACTCATCATaGATGCTGCTGATGATGCTG +
Preference number: 5 (lower is better)
Translates to: SVSSLRLPSCTETPPHPPASNSS*MLLMML
Trigger: CAGCATCATCAGCAGCATCAATGATGAGTTTGACGC...GGGAGGATGCGGAGGGGTTTCTGTGCAGGACGGGAGTCTCAGAGAGGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGAGGACACAGCTGGCGTaGTCACACCCAGCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTRTQLA*SHPAWW
Trigger: CCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCT...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp AAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGGTCTTTGGGGCTTCTTCCTCTaGGAGGCCAGGCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KSKSRSKALALLSGGDGLWGFFL*EARLSF
Trigger: GAAGCTCAGCCTGGCCTCCAAGAGGAAGAAGCCCCA...AAGACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp GAGAAAAGTCCAAATCAAGGTCAAAGGCACTTGCGTTGCTGTCGGGTGGTGACGTCAAAGGCACTTGCGTaGCTGTCGGGTGGTGACGGT +
Preference number: 5 (lower is better)
Translates to: EKSPNQGQRHLRCCRVVTSKALA*LSGGDG
Trigger: ACCGTCACCACCCGACAGCAACGCAAGTGCCTTTGA...CGTCACCACCCGACAGCAACGCAAGTGCCTTTGACCTTGATTTGGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAACCTGGGGCTCAGCCCTaGTTAGCTGCCCTCGGGACA +
Preference number: 5 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQPGAQP*LAALGT
Trigger: TGTCCCGAGGGCAGCTAACAAGGGCTGAGCCCCAGG...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAACAAGGTCAAAGGCACTaGCGTTGCTGTCGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQQGQRH*RCCRVV
Trigger: CACCACCCGACAGCAACGCAAGTGCCTTTGACCTTG...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS-3UTR CAA 90 bp CTGGTGTCTCAAGTCTGTAGCACCAAATGCAAAAGGGAGAAAAGTCCAAATCAACCCCCATCTTTGTTGTaGGTCGTGGTGGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LVSQVCSTKCKREKSPNQPPSLL*VVVVCF
Trigger: AAAACAGACCACCACGACCAACAACAAAGATGGGGG...TTGATTTGGACTTTTCTCCCTTTTGCATTTGGTGCTACAGACTTGAGACACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315264.7
CDS GCA 72 bp CGGATGCCCACCGCGAGGGCCCGGCCTGGGGCTCCCTaGCGGGTCGGGATGGGGCCACTGCAGCCACTTCCC +
Preference number: 6 (lower is better)
Translates to: RMPTARARPGAP*RVGMGPLQPLP
Trigger: GGGAAGTGGCTGCAGTGGCCCCATCCCGACCCGGCAGGGAGCCCCAGGCCGGGCCCTCGCGGTGGGCATCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp AGCCTTCGCCCCGACACTGGGCCCGGCCCGTGGGGCTaGTCTGGGACCGGCCACAGGGCCGCCAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: SLRPDTGPGPWG*SGTGHRAARAP
Trigger: AGGAGCCCTGGCGGCCCTGTGGCCGGTCCCAGAGCAGCCCCACGGGCCGGGCCCAGTGTCGGGGCGAAGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTGGTGGCGAGGGCTTCCGGCCCCCTCGGGCGGGGCTaGCCTGAGCTCCGTCGGTGCCACCTGGACCTCCTG +
Preference number: 6 (lower is better)
Translates to: LVARASGPLGRG*PELRRCHLDLL
Trigger: CAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGCCCCGCCCGAGGGGGCCGGAAGCCCTCGCCACCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GTCGGGCGTCCTCGCCACAGCCCGCTCGGCTGGTGCTaGGGGCCGCCAGGGCCGCATCCAGGTAGAAAGCCG +
Preference number: 6 (lower is better)
Translates to: VGRPRHSPLGWC*GPPGPHPGRKP
Trigger: CGGCTTTCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GGCCCCCTCGGGCGGGGCTGGCCTGAGCTCCGTCGGTaGCACCTGGACCTCCTGAGGGACCCTCGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: GPLGRGWPELRR*HLDLLRDPRCR
Trigger: ACGGCAACGAGGGTCCCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGCCCCGCCCGAGGGGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CGGTTTCCGGGGGAGGCTGGAGTGGATGGTCTGGGCTaGGGATGCCCACCGCGAGGGCCCGGCCTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: RFPGEAGVDGLG*GCPPRGPGLGL
Trigger: GAGCCCCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp ACAGCATGCGGAGGGGCCGAGGCCGGGCTGCTCCTCTaGTCCAGGCTGGACTTCCGCGTGGGTGGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: TACGGAEAGLLL*SRLDFRVGGAG
Trigger: CCCGGCCCCACCCACGCGGAAGTCCAGCCTGGAGCAGAGGAGCAGCCCGGCCTCGGCCCCTCCGCATGCTGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp AGCTGCGTCGGGCGTCCTCGCCACAGCCCGCTCGGCTaGTGCTGCGGGCCGCCAGGGCCGCATCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: SCVGRPRHSPLG*CCGPPGPHPGR
Trigger: TCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGACGCAGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp CCGCAGGCTCTGGTCGCGCCCGCACACCTCCACGGCTaGGACCCGGACGGAGAAGCGGGTGCCCGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: PQALVAPAHLHG*DPDGEAGARPL
Trigger: GAGAGGACGGGCACCCGCTTCTCCGTCCGGGTCTCAGCCGTGGAGGTGTGCGGGCGCGACCAGAGCCTGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp GCCGCTGCAGACCTGTGGCCCTCTTCTTGGGGGACTTaGGGCTGCGGGTGCGGGCGCCTGGGGAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: AAADLWPSSWGT*GCGCGRLGRQP
Trigger: GGGCTGCCTCCCCAGGCGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAGAGGGCCACAGGTCTGCAGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp TGCGTCGGGCGTCCTCGCCACAGCCCGCTCGGCTGGTaGTGCGGGCCGCCAGGGCCGCATCCAGGTAGAAAG +
Preference number: 6 (lower is better)
Translates to: CVGRPRHSPLGW*CGPPGPHPGRK
Trigger: CTTTCTACCTGGATGCGGCCCTGGCGGCCCGCAGCACCAGCCGAGCGGGCTGTGGCGAGGACGCCCGACGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp TCCTCGCTCCGTCCCACGTCCCGTCCTCCAGCCCGCTaGACGCCCCCTCCTCTTGTCCGGCGCCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SSLRPTSRPPAR*TPPPLVRRPAS
Trigger: TGAGGCTGGGCGCCGGACAAGAGGAGGGGGCGTGCAGCGGGCTGGAGGACGGGACGTGGGACGGAGCGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GGGTGCTGGCAGCCATCGGGGTGCCCACGGCCTTCCTaGGGGATGCAGCCTCTGGTGGCGAGGGCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: GCWQPSGCPRPS*GMQPLVARASG
Trigger: GCCGGAAGCCCTCGCCACCAGAGGCTGCATCCCCCAGGAAGGCCGTGGGCACCCCGATGGCTGCCAGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GTCCTCGGTTTCCGGGGGAGGCTGGAGTGGATGGTCTaGGCTGCGGATGCCCACCGCGAGGGCCCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VLGFRGRLEWMV*AADAHREGPAW
Trigger: CCAGGCCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp TGTCACACCCAGCGTGGTGGCACCCCTCCGCAGCGGTaGGATCCGAGCCACAGCCTCTGGCCTGCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: CHTQRGGTPPQR*DPSHSLWPAGR
Trigger: GCGGCCCGCAGGCCAGAGGCTGTGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp CGCCGCTGCAGACCTGTGGCCCTCTTCTTGGGGGACTaGAGGCTGCGGGTGCGGGCGCCTGGGGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RRCRPVALFLGD*RLRVRAPGEAA
Trigger: GGCTGCCTCCCCAGGCGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAGAGGGCCACAGGTCTGCAGCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp GCCGCCACCGCTGCCTCGGCCAGGCACGCCGGCGGGAGGAAGCTGTaGACCCGCGAGACACTCCACATGCCCTCCAGGCACTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AATAASARHAGGRKL*TRETLHMPSRHCWA
Trigger: GGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGCCGGCGTGCCTGGCCGAGGCAGCGGTGGCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp AGCTTGGGTACAGCCCGGGGAGGCCGCCCAGGGGCTTCCCGGCCCTaGCTGCTGCTGTGCGCCAGGCCTTCGTACCGCTCCAGAGACGCG +
Preference number: 6 (lower is better)
Translates to: SLGTARGGRPGASRP*LLLCARPSYRSRDA
Trigger: CGCGTCTCTGGAGCGGTACGAAGGCCTGGCGCACAGCAGCAGCAAGGGCCGGGAAGCCCCTGGGCGGCCTCCCCGGGCTGTACCCAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp CCACGAGGAGCCACCTCGGCCCGGGGCTCCACTGGCTaGCAGCTCATGGACGCGGCTGTGAGCAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: PRGATSARGSTG*QLMDAAVSSPE
Trigger: CTCCGGGCTGCTCACAGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCCGGGCCGAGGTGGCTCCTCGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp CTCCCCCACGTTCACGCCGCTGTCATGGCCGCTGTCTaGGTCCGCCGAGCCCCACGAGGAGCCACCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LPHVHAAVMAAV*VRRAPRGATSA
Trigger: GGCCGAGGTGGCTCCTCGTGGGGCTCGGCGGACTCAGACAGCGGCCATGACAGCGGCGTGAACGTGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CCGGGTTCACAGCATGCGGAGGGGCCGAGGCCGGGCTaGTCCTCTGCTCCAGGCTGGACTTCCGCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PGSQHAEGPRPG*SSAPGWTSAWV
Trigger: CACCCACGCGGAAGTCCAGCCTGGAGCAGAGGAGCAGCCCGGCCTCGGCCCCTCCGCATGCTGTGAACCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp AGGCAGTCCTCGGTTTCCGGGGGAGGCTGGAGTGGATaGTCTGGGCTGCGGATGCCCACCGCGAGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: RQSSVSGGGWSG*SGLRMPTARAR
Trigger: CCGGGCCCTCGCGGTGGGCATCCGCAGCCCAGACCATCCACTCCAGCCTCCCCCGGAAACCGAGGACTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GGCTCTGGCCCAGGCGAGCACAGCCCACACGGGTGGTaGCAGAGGCAGTCCTCGGTTTCCGGGGGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GSGPGEHSPHGW*QRQSSVSGGGW
Trigger: CCAGCCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTGTGGGCTGTGCTCGCCTGGGCCAGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GGATCCGAGCCACAGCCTCTGGCCTGCGGGCCGCCCTaGCTGCCACCTCACACCCGTCCACCACTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSEPQPLACGPP*LPPHTRPPLSG
Trigger: CCCAGAGAGTGGTGGACGGGTGTGAGGTGGCAGCCAGGGCGGCCCGCAGGCCAGAGGCTGTGGCTCGGATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp CGGAGGGTGGTCCCGGGCCCGCTGACCAGCTTCCACGCCTGTCGCTaGAGCTCCACCAGCTTCGTGTGGCAGTGGCGGCACCAGCCGCCT +
Preference number: 6 (lower is better)
Translates to: RRVVPGPLTSFHACR*SSTSFVWQWRHQPP
Trigger: AGGCGGCTGGTGCCGCCACTGCCACACGAAGCTGGTGGAGCTCAAGCGACAGGCGTGGAAGCTGGTCAGCGGGCCCGGGACCACCCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp GCAGGCGGTGGATGCGGGCGGCGAGCTGCACGGTGCTaGGTGTCTCTGCGTGCTGGGCTGGCGCATCCGACA +
Preference number: 6 (lower is better)
Translates to: AGGGCGRRAARC*VSLRAGLAHPT
Trigger: TGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp GGCTGTGAGCAGCCCGGAGCGCCTGCTTTGTGCCCATaGCGGTACCCCGGCCAGCCTTCGCCCCGACACTGG +
Preference number: 6 (lower is better)
Translates to: GCEQPGAPALCP*RYPGQPSPRHW
Trigger: CCAGTGTCGGGGCGAAGGCTGGCCGGGGTACCGTCATGGGCACAAAGCAGGCGCTCCGGGCTGCTCACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GGGGCCTGCAGCAGGTGCATGGCCTCCCGTGTGAGCTaGTGCAGGTGTGTGGCGCAGACGTCACAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: GACSRCMASRVS*CRCVAQTSQRR
Trigger: GCGCCGCTGTGACGTCTGCGCCACACACCTGCAGCAGCTCACACGGGAGGCCATGCACCTGCTGCAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CCCAGCTCGTCCTGGCTGCCTCCCTGCAGGACCCGCTaGTCCTGGCGTGTCCCTCGAGCTGGTCGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PSSSWLPPCRTR*SWRVPRAGRGA
Trigger: AGCACCACGACCAGCTCGAGGGACACGCCAGGACCAGCGGGTCCTGCAGGGAGGCAGCCAGGACGAGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GGTGGGTGTCTGGACCAGAACTGCCTCGAGGGGTGCTaGCAGCCATCGGGGTGCCCACGGCCTTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GGCLDQNCLEGC*QPSGCPRPSWG
Trigger: CCCCCAGGAAGGCCGTGGGCACCCCGATGGCTGCCAGCACCCCTCGAGGCAGTTCTGGTCCAGACACCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GGGTCCTCAAACAGGCCTCCACGGCCAGGTGGGCTCTaGCCCAGGCGAGCACAGCCCACACGGGTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: GSSNRPPRPGGL*PRRAQPTRVVA
Trigger: TGCCACCACCCGTGTGGGCTGTGCTCGCCTGGGCCAGAGCCCACCTGGCCGTGGAGGCCTGTTTGAGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CGCTCCTACAGGCGGGAGCTGGACCGTGTGTGGGGCTaGAGGGTGGCACACCCAGCTTGGGTACAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RSYRRELDRVWG*RVAHPAWVQPG
Trigger: CCCGGGCTGTACCCAAGCTGGGTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CACAGCCTTGGCTGCGCCGCTCCTACAGGCGGGAGCTaGACCGTGTGTGGGGCTGGAGGGTGGCACACCCAG +
Preference number: 6 (lower is better)
Translates to: HSLGCAAPTGGS*TVCGAGGWHTQ
Trigger: CTGGGTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAGCCAAGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CCTTGCACAGGTTCACGCACTGCTCCAGGGCCGCCGTaGCTCGCTCCAGGGCCGCCAGGTACTCGGCCGACT +
Preference number: 6 (lower is better)
Translates to: PCTGSRTAPGPP*LAPGPPGTRPT
Trigger: AGTCGGCCGAGTACCTGGCGGCCCTGGAGCGAGCCACGGCGGCCCTGGAGCAGTGCGTGAACCTGTGCAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp GCTGCCTCGGCCAGGCACGCCGGCGGGAGGAAGCTGTaGACCCGCGAGACACTCCACATGCCCTCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AASARHAGGRKL*TRETLHMPSRH
Trigger: GTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGCCGGCGTGCCTGGCCGAGGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp CGGCCCTGGGTCTCGGCCAGCTCCTCACACAGGTGCTaGTGCTTGGCCTGCACCTCCCGCAGCCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RPWVSASSSHRC*CLACTSRSRCC
Trigger: GCAGCAGCGGCTGCGGGAGGTGCAGGCCAAGCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp AGCATCAGCCGGCCCTGGGTCTCGGCCAGCTCCTCACACAGGTGCTaGTGCTTGGCCTGCACCTCCCGCAGCCGCTGCTGCCTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SISRPWVSASSSHRC*CLACTSRSRCCLRS
Trigger: GGAGCGCAGGCAGCAGCGGCTGCGGGAGGTGCAGGCCAAGCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp AGGCCACCACCTCCGTGGGAGCATCTCCCCAGGACACAGCTGGCGTaGTCACACCCAGCGTGGTGGCACCCCTCCGCAGCGGTGGGATCC +
Preference number: 6 (lower is better)
Translates to: RPPPPWEHLPRTQLA*SHPAWWHPSAAVGS
Trigger: GGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAGATGCTCCCACGGAGGTGGTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp CTGCCTCGGCCAGGCACGCCGGCGGGAGGAAGCTGTTaGCCCGCGAGACACTCCACATGCCCTCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: LPRPGTPAGGSC*PARHSTCPPGT
Trigger: AGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAACAGCTTCCTCCCGCCGGCGTGCCTGGCCGAGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GCCTGCAGCAGGTGCATGGCCTCCCGTGTGAGCTGCTaGAGGTGTGTGGCGCAGACGTCACAGCGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: ACSRCMASRVSC*RCVAQTSQRRS
Trigger: CGAGCGCCGCTGTGACGTCTGCGCCACACACCTGCAGCAGCTCACACGGGAGGCCATGCACCTGCTGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GGTGACCGTGCTCAGCGCCCCTCCAAGACCCGCAGGTaGTACAGACACCTGGACACTGGGCCCGGGGGACCA +
Preference number: 6 (lower is better)
Translates to: GDRAQRPSKTRR*YRHLDTGPGGP
Trigger: TGGTCCCCCGGGCCCAGTGTCCAGGTGTCTGTAGCACCTGCGGGTCTTGGAGGGGCGCTGAGCACGGTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CGGGCGGCGAGCTGCACGGTGCTGAGTGTCTCTGCGTaGTGGGCTGGCGCATCCGACACGTGGGCGATCATG +
Preference number: 6 (lower is better)
Translates to: RAASCTVLSVSA*WAGASDTWAIM
Trigger: CATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp TTCTTCCTGCGCAGGCGGTGGATGCGGGCGGCGAGCTaGACGGTGCTGAGTGTCTCTGCGTGCTGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: FFLRRRWMRAAS*TVLSVSACWAG
Trigger: GCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp AGCCACTGCTGCCACCGCTGTGGTGGAAAAGGGCGGTaGGGCCCATGGCGGGCGGCAGCTCTCCACTCAGCA +
Preference number: 6 (lower is better)
Translates to: SHCCHRCGGKGR*GPWRAAALHSA
Trigger: TGCTGAGTGGAGAGCTGCCGCCCGCCATGGGCCGCACCGCCCTTTTCCACCACAGCGGTGGCAGCAGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CCCTGGGTCTCGGCCAGCTCCTCACACAGGTGCTTGTaGTTGGCCTGCACCTCCCGCAGCCGCTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PWVSASSSHRCL*LACTSRSRCCL
Trigger: CAGGCAGCAGCGGCTGCGGGAGGTGCAGGCCAAGCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp ACCATCATGACGTGCGCCTTGCACAGGTTCACGCACTaGTCCAGGGCCGCCGTGGCTCGCTCCAGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: TIMTCALHRFTH*SRAAVARSRAA
Trigger: GGCGGCCCTGGAGCGAGCCACGGCGGCCCTGGAGCAGTGCGTGAACCTGTGCAAGGCGCACGTCATGATGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CGGCATCGAAGGCAAACATCTTGGGAACTGCAGCAGTaGCGGCTCGCCGGGGGCCTGCGCTGCCTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: RHRRQTSWELQQ*RLAGGLRCLGD
Trigger: GTCCCCCAGGCAGCGCAGGCCCCCGGCGAGCCGCCACTGCTGCAGTTCCCAAGATGTTTGCCTTCGATGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GCTGGGCTGGCGCATCCGACACGTGGGCGATCATGGTaGTGCGGCAGCCAGCGGTGGCCAGGGATTCACGCA +
Preference number: 6 (lower is better)
Translates to: AGLAHPTRGRSW*CGSQRWPGIHA
Trigger: TGCGTGAATCCCTGGCCACCGCTGGCTGCCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CGTGCTGGGCTGGCGCATCCGACACGTGGGCGATCATaGTGGTGCGGCAGCCAGCGGTGGCCAGGGATTCAC +
Preference number: 6 (lower is better)
Translates to: RAGLAHPTRGRS*WCGSQRWPGIH
Trigger: GTGAATCCCTGGCCACCGCTGGCTGCCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp AGTGTCTCTGCGTGCTGGGCTGGCGCATCCGACACGTaGGCGATCATGGTGGTGCGGCAGCCAGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SVSACWAGASDT*AIMVVRQPAVA
Trigger: GGCCACCGCTGGCTGCCGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CCCAGGACACAGCTGGCGTTGTCACACCCAGCGTGGTaGCACCCCTCCGCAGCGGTGGGATCCGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: PRTQLALSHPAW*HPSAAVGSEPQ
Trigger: CTGTGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTCCCCAGGACACAGCTGGCGTTGTCACACCCAGCGTaGTGGCACCCCTCCGCAGCGGTGGGATCCGAGCCA +
Preference number: 6 (lower is better)
Translates to: LPRTQLALSHPA*WHPSAAVGSEP
Trigger: TGGCTCGGATCCCACCGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTTCTACCTTGCTGGCCCGGGCCTTCAGGCTGGACGTaGCCCTGGGGACAGAGTGGTCAGCCCGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLPCWPGPSGWT*PWGQSGQPGCW
Trigger: CCAGCAGCCGGGCTGACCACTCTGTCCCCAGGGCCACGTCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTGCGCCGCTCCTACAGGCGGGAGCTGGACCGTGTGTaGGGCTGGAGGGTGGCACACCCAGCTTGGGTACAG +
Preference number: 6 (lower is better)
Translates to: LRRSYRRELDRV*GWRVAHPAWVQ
Trigger: CTGTACCCAAGCTGGGTGTGCCACCCTCCAGCCCCACACACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTTCTTGGGGGACTTGAGGCTGCGGGTGCGGGCGCCTaGGGAGGCAGCCCCACTCTCGCTCATGGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: LLGGLEAAGAGA*GGSPTLAHGVR
Trigger: CCTGACTCCATGAGCGAGAGTGGGGCTGCCTCCCCAGGCGCCCGCACCCGCAGCCTCAAGTCCCCCAAGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp TCCAGCCAGCGGCCAGGCTCCAGCATCAGCCGGCCCTaGGTCTCGGCCAGCTCCTCACACAGGTGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SSQRPGSSISRP*VSASSSHRCLC
Trigger: GCACAAGCACCTGTGTGAGGAGCTGGCCGAGACCCAGGGCCGGCTGATGCTGGAGCCTGGCCGCTGGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp GTCCCGGGCCCGCTGACCAGCTTCCACGCCTGTCGCTaGAGCTCCACCAGCTTCGTGTGGCAGTGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: VPGPLTSFHACR*SSTSFVWQWRH
Trigger: GTGCCGCCACTGCCACACGAAGCTGGTGGAGCTCAAGCGACAGGCGTGGAAGCTGGTCAGCGGGCCCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp CCTCCGTGGGAGCATCTCCCCAGGACACAGCTGGCGTaGTCACACCCAGCGTGGTGGCACCCCTCCGCAGCG +
Preference number: 6 (lower is better)
Translates to: PPWEHLPRTQLA*SHPAWWHPSAA
Trigger: CGCTGCGGAGGGGTGCCACCACGCTGGGTGTGACAACGCCAGCTGTGTCCTGGGGAGATGCTCCCACGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp CTCGGGAGGAAGCCCGCCTTGGGAGCCAGACCCTTCTaGCTGGTGGGGGAGGCCTTCAGGCTCCCCGAGCAG +
Preference number: 6 (lower is better)
Translates to: LGRKPALGARPF*LVGEAFRLPEQ
Trigger: CTGCTCGGGGAGCCTGAAGGCCTCCCCCACCAGCAAGAAGGGTCTGGCTCCCAAGGCGGGCTTCCTCCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp TCGGCCTCTGGGCGACAGGCTGGCAGGGCCCCAGGTGCTGGTAGCTaGTCGAGAAGCAGGGCAGAGAGGCAAGGATCCCGGAGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SASGRQAGRAPGAGS*SRSRAERQGSRRVV
Trigger: GACCACCCTCCGGGATCCTTGCCTCTCTGCCCTGCTTCTCGACAAGCTACCAGCACCTGGGGCCCTGCCAGCCTGTCGCCCAGAGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp GCTGGCCTGAGCTCCGTCGGTGCCACCTGGACCTCCTaGGGGACCCTCGTTGCCGTCCATGCATTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: AGLSSVGATWTS*GTLVAVHAFQP
Trigger: CGGCTGGAATGCATGGACGGCAACGAGGGTCCCTCAGGAGGTCCAGGTGGCACCGACGGAGCTCAGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp GGGGCTCCACTGGCTGACAGCTCATGGACGCGGCTGTaGGCAGCCCGGAGCGCCTGCTTTGTGCCCATGACG +
Preference number: 6 (lower is better)
Translates to: GAPLADSSWTRL*AARSACFVPMT
Trigger: CGTCATGGGCACAAAGCAGGCGCTCCGGGCTGCTCACAGCCGCGTCCATGAGCTGTCAGCCAGTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp ACCCGCGAGACACTCCACATGCCCTCCAGGCACTGCTaGGCCTGGATGGTGACCGTGCTCAGCGCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: TRETLHMPSRHC*AWMVTVLSAPP
Trigger: TGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GCGGCGAGCTGCACGGTGCTGAGTGTCTCTGCGTGCTaGGCTGGCGCATCCGACACGTGGGCGATCATGGTG +
Preference number: 6 (lower is better)
Translates to: AASCTVLSVSAC*AGASDTWAIMV
Trigger: CACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CTGGAGGCGTACTTGGCCTTCTTCCTGCGCAGGCGGTaGATGCGGGCGGCGAGCTGCACGGTGCTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: LEAYLAFFLRRR*MRAASCTVLSV
Trigger: GACACTCAGCACCGTGCAGCTCGCCGCCCGCATCCACCGCCTGCGCAGGAAGAAGGCCAAGTACGCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp GGGCGACAGGCTGGCAGGGCCCCAGGTGCTGGTAGCTaGTCGAGAAGCAGGGCAGAGAGGCAAGGATCCCGG +
Preference number: 6 (lower is better)
Translates to: GRQAGRAPGAGS*SRSRAERQGSR
Trigger: CCGGGATCCTTGCCTCTCTGCCCTGCTTCTCGACAAGCTACCAGCACCTGGGGCCCTGCCAGCCTGTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp GACGCGTGTCCGGCAAGACGGTGTGCTGCTTCTACCTaGCTGGCCCGGGCCTTCAGGCTGGACGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: DACPARRCAAST*LARAFRLDVAL
Trigger: CAGGGCCACGTCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGACACGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp TTGACCCGCGAGACACTCCACATGCCCTCCAGGCACTaGTGGGCCTGGATGGTGACCGTGCTCAGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: LTRETLHMPSRH*WAWMVTVLSAP
Trigger: AGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTCGCGGGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CCGCTCCAGAGACGCGTGTCCGGCAAGACGGTGTGCTaGTTCTACCTTGCTGGCCCGGGCCTTCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PLQRRVSGKTVC*FYLAGPGLQAG
Trigger: TCCAGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGACACGCGTCTCTGGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GAGACACTCCACATGCCCTCCAGGCACTGCTGGGCCTaGATGGTGACCGTGCTCAGCGCCCCTCCAAGACCC +
Preference number: 6 (lower is better)
Translates to: ETLHMPSRHCWA*MVTVLSAPPRP
Trigger: GGGTCTTGGAGGGGCGCTGAGCACGGTCACCATCCAGGCCCAGCAGTGCCTGGAGGGCATGTGGAGTGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp GAGCTGCACGGTGCTGAGTGTCTCTGCGTGCTGGGCTaGCGCATCCGACACGTGGGCGATCATGGTGGTGCG +
Preference number: 6 (lower is better)
Translates to: ELHGAECLCVLG*RIRHVGDHGGA
Trigger: CGCACCACCATGATCGCCCACGTGTCGGATGCGCCAGCCCAGCACGCAGAGACACTCAGCACCGTGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp AAGTGGTCTGCGTCTCGGGGACCCTTGGAGGGCCGGTaGCGGCTCAGGGCAGGGATGATGGGCACGAAGTCA +
Preference number: 6 (lower is better)
Translates to: KWSASRGPLEGR*RLRAGMMGTKS
Trigger: TGACTTCGTGCCCATCATCCCTGCCCTGAGCCGCCACCGGCCCTCCAAGGGTCCCCGAGACGCAGACCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GGACCCTCGTTGCCGTCCATGCATTCCAGCCGCTCCTaGAGCTCCGCGAAGGTGCTGCAGCGGAAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GPSLPSMHSSRS*SSAKVLQRKWS
Trigger: AGACCACTTCCGCTGCAGCACCTTCGCGGAGCTGCAGGAGCGGCTGGAATGCATGGACGGCAACGAGGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp GTACCGCTCCAGAGACGCGTGTCCGGCAAGACGGTGTaGTGCTTCTACCTTGCTGGCCCGGGCCTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: VPLQRRVSGKTV*CFYLAGPGLQA
Trigger: AGCCTGAAGGCCCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGACACGCGTCTCTGGAGCGGTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS TCA 72 bp AGCCAGCGGTGGCCAGGGATTCACGCAGCAGCATGGTaGGCCTGTGGTCCCGATACGGCACATGCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: SQRWPGIHAAAW*ACGPDTAHAWL
Trigger: GAGCCAAGCATGTGCCGTATCGGGACCACAGGCTCACCATGCTGCTGCGTGAATCCCTGGCCACCGCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CCA 72 bp CAGACAATGGCCTTGCAGGGCTCAGGGGTACCCTGGTaGGTGTCTGGACCAGAACTGCCTCGAGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: QTMALQGSGVPW*VSGPELPRGVL
Trigger: CAGCACCCCTCGAGGCAGTTCTGGTCCAGACACCCACCAGGGTACCCCTGAGCCCTGCAAGGCCATTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 90 bp GGCCAAGCGCTGCTGTCCTCTCTCTGGTCACCCCAGACAATGGCCTaGCAGGGCTCAGGGGTACCCTGGTGGGTGTCTGGACCAGAACTG +
Preference number: 6 (lower is better)
Translates to: GQALLSSLWSPQTMA*QGSGVPWWVSGPEL
Trigger: CAGTTCTGGTCCAGACACCCACCAGGGTACCCCTGAGCCCTGCAAGGCCATTGTCTGGGGTGACCAGAGAGAGGACAGCAGCGCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS GCA 72 bp CAGCCTTTTCCGGGACCAGCAGCTCAGGCCAAGCGCTaGTGTCCTCTCTCTGGTCACCCCAGACAATGGCCT +
Preference number: 6 (lower is better)
Translates to: QPFPGPAAQAKR*CPLSGHPRQWP
Trigger: AGGCCATTGTCTGGGGTGACCAGAGAGAGGACAGCAGCGCTTGGCCTGAGCTGCTGGTCCCGGAAAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp CGCAGCATAACCTTCACCTTCCCGATGCTGCCAGGGTaGTCCTTGGTCTTGGAGGCGGCCCTGAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RSITFTFPMLPG*SLVLEAALSRQ
Trigger: CTGCCTGCTCAGGGCCGCCTCCAAGACCAAGGACAACCCTGGCAGCATCGGGAAGGTGAAGGTTATGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7
CDS CAA 72 bp AGCATGGTGAGCCTGTGGTCCCGATACGGCACATGCTaGGCTCCGTTGACCAGGGCCAAGATGACGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SMVSLWSRYGTC*APLTRAKMTLP
Trigger: GGGCAGCGTCATCTTGGCCCTGGTCAACGGAGCCAAGCATGTGCCGTATCGGGACCACAGGCTCACCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315264.7
ENST00000423312.7