RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF24 (Homo sapiens)

Ensembl gene IDs: ENSG00000186638

Ensembl transcript IDs: ENST00000379174.7, ENST00000402558.6, ENST00000402558.7, ENST00000684219.1

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACGTGGGGCTGGGGTGACGCTAGCATAGGCAGGACCAGCGTGTaGGTTCTGGTGTGTGCAGGGAGGACCTGGCAGAGGCTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: ATWGWGDASIGRTSV*VLVCAGRTWQRLLQ
Trigger: CTGGAGGAGCCTCTGCCAGGTCCTCCCTGCACACACCAGAACCCACACGCTGGTCCTGCCTATGCTAGCGTCACCCCAGCCCCACGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 90 bp AAACCTGGCCCAGCTCCGTCTGTGGACCAAGGACGTAGGCCTTCCTaGCTGTGGAGTTGGGATAGGCTGGGCCTTCAGGGGGATCACCCA +
Preference number: 1 (lower is better)
Translates to: KPGPAPSVDQGRRPS*LWSWDRLGLQGDHP
Trigger: TGGGTGATCCCCCTGAAGGCCCAGCCTATCCCAACTCCACAGTCAGGAAGGCCTACGTCCTTGGTCCACAGACGGAGCTGGGCCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 90 bp ATGCCCCCTGGCGGTCAGATGAGGCACTGTCAGGCTGACAAAGGGTaGCTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCT +
Preference number: 1 (lower is better)
Translates to: MPPGGQMRHCQADKG*LDQAASVSREPFNP
Trigger: AGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAGTCACCCTTTGTCAGCCTGACAGTGCCTCATCTGACCGCCAGGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR CCA 90 bp GGCAAGCCTAGACTGAGTCTTTTAAACCTGGCCCAGCTCCGTCTGTaGACCAAGGACGTAGGCCTTCCTGACTGTGGAGTTGGGATAGGC +
Preference number: 1 (lower is better)
Translates to: GKPRLSLLNLAQLRL*TKDVGLPDCGVGIG
Trigger: GCCTATCCCAACTCCACAGTCAGGAAGGCCTACGTCCTTGGTCCACAGACGGAGCTGGGCCAGGTTTAAAAGACTCAGTCTAGGCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 90 bp CAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATTGATGTGTaGCACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: QRPFTRAKVRRKIDV*HRHPLLPQHWIAGR
Trigger: CCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 90 bp GCTGAAGGTTTGTGTGTGAATTCTGTTTCAGAGGCCTCAGACTGTTaGACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACC +
Preference number: 1 (lower is better)
Translates to: AEGLCVNSVSEASDC*TEHSVQLPRFPTQT
Trigger: GGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAATTCACACACAAACCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 90 bp CTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTaGATTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTG +
Preference number: 1 (lower is better)
Translates to: LKRYTAGRTWLKVCV*ILFQRPQTVEQSTL
Trigger: CAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAATTCACACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 90 bp CAAAAGTCAGGAGAAAAATTGATGTGTGACACAGGCACCCTCTTCTaGCTCAACACTGGATTGCAGGAAGGGAAGGGAGCTGTAAATATA +
Preference number: 1 (lower is better)
Translates to: QKSGEKLMCDTGTLF*LNTGLQEGKGAVNI
Trigger: TATATTTACAGCTCCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCCTGACTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATaGATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTCAC +
Preference number: 1 (lower is better)
Translates to: SKRGRSPFTVSSRHL*IICHKQRMGFKLFH
Trigger: GTGAAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACCCAGCGTGTGGGTTCTaGTGTGTGCAGGGAGGACCT +
Preference number: 2 (lower is better)
Translates to: VLRPGPPLEALLCMELRDPACGF*CVQGGP
Trigger: AGGTCCTCCCTGCACACACCAGAACCCACACGCTGG...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCTCAATCTCCAAGGGCTaGTGGGGCAGAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGASISKG*WGRAHP
Trigger: GGGGTGAGCTCTGCCCCATCAGCCCTTGGAGATTGA...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGGAAGCCACGTGGGGCTaGGGTGACGCTAGCATAGGC +
Preference number: 2 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGEATWG*GDASIG
Trigger: GCCTATGCTAGCGTCACCCCAGCCCCACGTGGCTTC...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCTATCTGAAGCCACGTaGGGCTGGGGTGACGCTAGC +
Preference number: 2 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGLSEAT*GWGDAS
Trigger: GCTAGCGTCACCCCAGCCCCACGTGGCTTCAGATAG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGCCCAGCACAGACTCCTaGAGGGCCCCCACCATCTCG +
Preference number: 2 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKPSTDS*RAPTIS
Trigger: CGAGATGGTGGGGGCCCTGCAGGAGTCTGTGCTGGG...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGGGCAGGACCAGCGTGTaGGTTCTGGTGTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRGRTSV*VLVCAG
Trigger: CCCTGCACACACCAGAACCCACACGCTGGTCCTGCC...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATGGCCTGGCCCACCCTTaGAGGCACTCCTGTGCATGG +
Preference number: 2 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNGLAHP*RHSCAW
Trigger: CCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCC...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCCTTCTGCCTCAACACTaGATTGCAGGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGLLPQH*IAGREG
Trigger: CCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAG...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGTCAATCTCCAAGGGCTaGTGGGGCAGAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRSISKG*WGRAHP
Trigger: GGGGTGAGCTCTGCCCCATCAGCCCTTGGAGATTGA...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGGTGGGTTCTGGTGTGTaGAGGGAGGACCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKVGSGV*REDLAE
Trigger: CTCTGCCAGGTCCTCCCTGCACACACCAGAACCCAC...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCTATCTGAAGCCACGTaGGGCTGGGGTGACGCTAGC +
Preference number: 2 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVLSEAT*GWGDAS
Trigger: GCTAGCGTCACCCCAGCCCCACGTGGCTTCAGATAG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGCCTCTAGGCTACCACTaGCCACCCCATCCTCTGATC +
Preference number: 2 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRPLGYH*PPHPLI
Trigger: GATCAGAGGATGGGGTGGTCAGTGGTAGCCTAGAGG...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATCCAGCGTGTGGGTTCTaGTGTGTGCAGGGAGGACCT +
Preference number: 2 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNPACGF*CVQGGP
Trigger: AGGTCCTCCCTGCACACACCAGAACCCACACGCTGG...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGGCCTGGCCCACCCTTaGAGGCACTCCTGTGCATGG +
Preference number: 2 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDGLAHP*RHSCAW
Trigger: CCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACTCCTGTGCATGGAACTaGGGGACAGGGGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDSCAWN*GTGACP
Trigger: GGGACAGGCCCCTGTCCCTCAGTTCCATGCACAGGA...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGTCCTGTGCATGGAACTaGGGGACAGGGGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: FSISELSSHFRPVLVFGLSCAWN*GTGACP
Trigger: GGGACAGGCCCCTGTCCCTCAGTTCCATGCACAGGA...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTGTCTTCTCTGTCTTGTaGCCTCTGACCTCTAGGCTA +
Preference number: 2 (lower is better)
Translates to: LDQAASVSREPFNPLLGLVFSVL*PLTSRL
Trigger: TAGCCTAGAGGTCAGAGGTCACAAGACAGAGAAGAC...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCAGAAAAATTGATGTGTaGCACAGGCACCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGRKIDV*HRHPLL
Trigger: CAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCT...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTTAGGTTCTTCGGCCTaGCCCACCCTTGGAGGCACT +
Preference number: 2 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVLGSSA*PTLGGT
Trigger: AGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAA...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAACAGAATTCAGCTGGTaGAGCCTCTGGTCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKTEFSW*SLWSQH
Trigger: ATGCTGAGACCAGAGGCTTCACCAGCTGAATTCTGT...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTCAGGCTGACAAAGGGTaGCTGGACCAGGCTGCTAGT +
Preference number: 2 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVQADKG*LDQAAS
Trigger: ACTAGCAGCCTGGTCCAGTCACCCTTTGTCAGCCTG...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTCCCAGCACAGACTCCTaGAGGGCCCCCACCATCTCG +
Preference number: 2 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIPSTDS*RAPTIS
Trigger: CGAGATGGTGGGGGCCCTGCAGGAGTCTGTGCTGGG...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTGGCAGGACCAGCGTGTaGGTTCTGGTGTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFGRTSV*VLVCAG
Trigger: CCCTGCACACACCAGAACCCACACGCTGGTCCTGCC...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTTAGGTTCTTCGGCCTaGCCCACCCTTGGAGGCACT +
Preference number: 2 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVLGSSA*PTLGGT
Trigger: AGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAA...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR CAA 90 bp GCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATaGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTG +
Preference number: 2 (lower is better)
Translates to: ALYRGLSPEQKSGEK*MCDTGTLFCLNTGL
Trigger: CAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGGACCACCCCATCCTCTaGTCCCCAAACTTAGAAACT +
Preference number: 2 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKDHPIL*SPNLET
Trigger: AGTTTCTAAGTTTGGGGATCAGAGGATGGGGTGGTC...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGAGGCACTGTCAGGCTaGCAAAGGGTGACTGGACCA +
Preference number: 2 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDEALSG*QRVTGP
Trigger: TGGTCCAGTCACCCTTTGTCAGCCTGACAGTGCCTC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGTGGGTTCTGGTGTGTaGAGGGAGGACCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIVGSGV*REDLAE
Trigger: CTCTGCCAGGTCCTCCCTGCACACACCAGAACCCAC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATAGGAGCCAGGAGCTaGCATGGAAGCATGAGAGTA +
Preference number: 2 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRIGARS*HGSMRV
Trigger: TACTCTCATGCTTCCATGGCAGCTCCTGGCTCCTAT...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGCTTCTGCCTCAACACTaGATTGCAGGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVLLPQH*IAGREG
Trigger: CCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAG...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR CAA 90 bp AAATTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATaGCAGGAAGGGAAGGGAGCTGTAAATATAAGGCCTGTCTCACAT +
Preference number: 2 (lower is better)
Translates to: KLMCDTGTLFCLNTG*QEGKGAVNIRPVSH
Trigger: ATGTGAGACAGGCCTTATATTTACAGCTCCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR CAA 90 bp TGTCCTGAGCTGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTaGGCTGAAGGTTTGTGTGTGAATTCTGTTTCAGAGGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: CPELLPAKKIHSRQN*AEGLCVNSVSEASD
Trigger: GTCTGAGGCCTCTGAAACAGAATTCACACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCAGCTCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGACCACCCCATCCTCTaGTCCCCAAACTTAGAAACT +
Preference number: 2 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCDHPIL*SPNLET
Trigger: AGTTTCTAAGTTTGGGGATCAGAGGATGGGGTGGTC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGTCTTCTCTGTCTTGTaGCCTCTGACCTCTAGGCTA +
Preference number: 2 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCVFSVL*PLTSRL
Trigger: TAGCCTAGAGGTCAGAGGTCACAAGACAGAGAAGAC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGCTGCCATGGAAGCATaGGAGTATCGGGCATTGTAC +
Preference number: 2 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVAAMEA*EYRALY
Trigger: GTACAATGCCCGATACTCTCATGCTTCCATGGCAGC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTCAGGCTGACAAAGGGTaGCTGGACCAGGCTGCTAGT +
Preference number: 2 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFQADKG*LDQAAS
Trigger: ACTAGCAGCCTGGTCCAGTCACCCTTTGTCAGCCTG...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGACAGGCACCCTCTTCTaGCTCAACACTGGATTGCAG +
Preference number: 2 (lower is better)
Translates to: FSISELSSHFRPVLVFGLTGTLF*LNTGLQ
Trigger: CTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGT...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTATCTGCTGCTGTCAGTaGCACATCAAGTCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCICCCQ*HIKSRF
Trigger: AAACCTTGACTTGATGTGTCACTGACAGCAGCAGAT...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTCTGACAAAGGGTGACTaGACCAGGCTGCTAGTGTCT +
Preference number: 2 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFLTKGD*TRLLVS
Trigger: AGACACTAGCAGCCTGGTCCAGTCACCCTTTGTCAG...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGAGTCAGGAGAAAAATTaGTGTGTGACACAGGCACCC +
Preference number: 2 (lower is better)
Translates to: FSISELSSHFRPVLVFGLSQEKN*CVTQAP
Trigger: GGGTGCCTGTGTCACACATCAATTTTTCTCCTGACT...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGAGGCCTCAGACTGTTaGACAGAGCACTCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIEASDC*TEHSVQ
Trigger: TTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGAAGCCCTTTTACTGTaGGCAGCAGGCATTTATGCA +
Preference number: 2 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDEALLL*AAGIYA
Trigger: TGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCACAGAATTCAGCTGGTaGAGCCTCTGGTCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFTEFSW*SLWSQH
Trigger: ATGCTGAGACCAGAGGCTTCACCAGCTGAATTCTGT...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGCTGAAGGTTTGTGTGTaGATTCTGTTTCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWLKVCV*ILFQRP
Trigger: AGGCCTCTGAAACAGAATTCACACACAAACCTTCAG...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR GCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGAGCAGCAGGCATTTATaGATCATTTGCCACAAGCAG +
Preference number: 2 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWSSRHL*IICHKQ
Trigger: CTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCT...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTAAAGTAATTGGCACCTaGAGGCTACTTTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFKVIGT*RLLCLP
Trigger: GGGAAGACAAAGTAGCCTCCAGGTGCCAATTACTTT...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR TCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTGCTAGACTGGGTCTTTaGAGGTTTTTAGTGATCATG +
Preference number: 2 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFARLGL*RFLVIM
Trigger: CATGATCACTAAAAACCTTCAAAGACCCAGTCTAGC...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 72 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTaGATGGAACTGAGGGACAGGGGCCTGTCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: VLRPGPPLEALL*MELRDRGLSLR
Trigger: CCTCAGGGACAGGCCCCTGTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 72 bp GGCGGTCAGATGAGGCACTGTCAGGCTGACAAAGGGTaGCTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCA +
Preference number: 3 (lower is better)
Translates to: GGQMRHCQADKG*LDQAASVSREP
Trigger: TGGCTCTCTTGAGACACTAGCAGCCTGGTCCAGTCACCCTTTGTCAGCCTGACAGTGCCTCATCTGACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR CCA 72 bp TCTAGGCACAAGGGAAAGGCATTAGGTTCTTCGGCCTaGCCCACCCTTGGAGGCACTCCTGTGCATGGAACT +
Preference number: 3 (lower is better)
Translates to: SRHKGKALGSSA*PTLGGTPVHGT
Trigger: AGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTTGTGCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 72 bp CTGGGTAGTGAGGTGTCCCAGATAGGAGCCAGGAGCTaGCATGGAAGCATGAGAGTATCGGGCATTGTACAG +
Preference number: 3 (lower is better)
Translates to: LGSEVSQIGARS*HGSMRVSGIVQ
Trigger: CTGTACAATGCCCGATACTCTCATGCTTCCATGGCAGCTCCTGGCTCCTATCTGGGACACCTCACTACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTCGGCCTGGCCCACCCTaGGAGGCACTCCTGTGCATG +
Preference number: 3 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIRPGPP*EALLCM
Trigger: CATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCG...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 72 bp GGAGAAAAATTGATGTGTGACACAGGCACCCTCTTCTaGCTCAACACTGGATTGCAGGAAGGGAAGGGAGCT +
Preference number: 3 (lower is better)
Translates to: GEKLMCDTGTLF*LNTGLQEGKGA
Trigger: AGCTCCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCACCAATGGTTAAGTTaGGGCCAGTGTTTAGTCTTC +
Preference number: 3 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGHQWLS*GQCLVF
Trigger: GAAGACTAAACACTGGCCCAAACTTAACCATTGGTG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGTCTGGTCTCAGCATGTaGTCTTCTCTGTCTTGTGAC +
Preference number: 3 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRSGLSM*SSLSCD
Trigger: GTCACAAGACAGAGAAGACAACATGCTGAGACCAGA...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTTCTGGTCTCAGCATGTaGTCTTCTCTGTCTTGTGAC +
Preference number: 3 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCSGLSM*SSLSCD
Trigger: GTCACAAGACAGAGAAGACAACATGCTGAGACCAGA...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 72 bp TTCACCCGAGCAAAAGTCAGGAGAAAAATTGATGTGTaGCACAGGCACCCTCTTCTGCCTCAACACTGGATT +
Preference number: 3 (lower is better)
Translates to: FTRAKVRRKIDV*HRHPLLPQHWI
Trigger: AATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCCTGACTTTTGCTCGGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 72 bp TACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTaGATTCTGTTTCAGAGGCCTCAGACTGTTGAACAG +
Preference number: 3 (lower is better)
Translates to: YTAGRTWLKVCV*ILFQRPQTVEQ
Trigger: CTGTTCAACAGTCTGAGGCCTCTGAAACAGAATTCACACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGTGCCATTGTCCCACTaGAGCTTTTGGCTAGACTGG +
Preference number: 3 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIVPLSH*SFWLDW
Trigger: CCAGTCTAGCCAAAAGCTCAAGTGGGACAATGGCAC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR TCA 72 bp GATCACCCAGTAAAAGAGGAAGAAGCCCTTTTACTGTaGGCAGCAGGCATTTATGCATCATTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: DHPVKEEEALLL*AAGIYASFATS
Trigger: GCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACTGGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR GCA 72 bp GGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATaGATCATTTGCCACAAGCAGAGGATGGGATTTAAA +
Preference number: 3 (lower is better)
Translates to: GRSPFTVSSRHL*IICHKQRMGFK
Trigger: TTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCACCAATGGTTAAGTTaGGGCCAGTGTTTAGTCTTC +
Preference number: 3 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIHQWLS*GQCLVF
Trigger: GAAGACTAAACACTGGCCCAAACTTAACCATTGGTG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
3UTR-3UTR CAA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTAGTAAGTTTTTGTCCTaGACCTTAATACTGTGCCAT +
Preference number: 3 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFSKFLS*TLILCH
Trigger: ATGGCACAGTATTAAGGTCAAGGACAAAAACTTACT...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS-3UTR GCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACGCATGCGTGCCTAACTaGCCCCTAGGATCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VLRPGPPLEALLCMELRDACVPN*PLGSSP
Trigger: AGGAGAGGATCCTAGGGGGCAGTTAGGCACGCATGC...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCTGGGCCCGTGGCAGGTaGGATAGAGCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGWARGR*DRAAAG
Trigger: GCCAGCTGCAGCTCTATCTCACCTGCCACGGGCCCA...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCCCATCCTGGACCAGCTaGTCCGAGGGAGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAPSWTS*SEGGDP
Trigger: AGGGTCTCCTCCCTCGGAGCAGCTGGTCCAGGATGG...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACTCCTGGGCCCAGAGCTaGTCAGCCACATCACTACTT +
Preference number: 4 (lower is better)
Translates to: VLRPGPPLEALLCMELRDSWAQS*SATSLL
Trigger: AAGTAGTGATGTGGCTGACCAGCTCTGGGCCCAGGA...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGGCCCAGCTCCGTCTGTaGACCAAGGACGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVAQLRL*TKDVGL
Trigger: AAGGCCTACGTCCTTGGTCCACAGACGGAGCTGGGC...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCTCCTGTGCATGGAACTaGGGGACAGGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGSCAWN*GTGACP
Trigger: GGGACAGGCCCCTGTCCCTCAGTTCCATGCACAGGA...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCCTCTAGGCTACCACTaGCCACCCCATCCTCTGATC +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVPLGYH*PPHPLI
Trigger: GATCAGAGGATGGGGTGGTCAGTGGTAGCCTAGAGG...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACACAGAATTCAGCTGGTaGAGCCTCTGGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLRPGPPLEALLCMELRDTEFSW*SLWSQH
Trigger: ATGCTGAGACCAGAGGCTTCACCAGCTGAATTCTGT...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGTCATCCAGCTGTTCCTaGTGTGCTCGGATGACCACC +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVSSSCS*CARMTT
Trigger: GGTGGTCATCCGAGCACACCAGGAACAGCTGGATGA...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGAATAAGGATGCCCCCTaGCGGTCAGATGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVNKDAP*RSDEAL
Trigger: CAGTGCCTCATCTGACCGCCAGGGGGCATCCTTATT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGAGAACATTTGTCCTCTaGCAAAGCCCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVRTFVL*QSPRGA
Trigger: AGCTCCCCTGGGGCTTTGTCAGAGGACAAATGTTCT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGGTGCTGACGGATGGGTaGTGGGGACAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGVLTDG*WGQSWK
Trigger: CTTCCAGCTCTGTCCCCATCACCCATCCGTCAGCAC...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACGAAGCCCTTTTACTGTaGGCAGCAGGCATTTATGCA +
Preference number: 4 (lower is better)
Translates to: VLRPGPPLEALLCMELRDEALLL*AAGIYA
Trigger: TGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTC...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGACTCTGCTGTCTTTCTaGCACCTGCTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVTLLSF*HLLLRT
Trigger: GGTCCTGAGAAGCAGGTGGCAGAAAGACAGCAGAGT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCCTGGATTGGGCCGTCTaGACTGACTTCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGALDWAV*TDFSQR
Trigger: CCTCTGAGAGAAGTCAGTGCAGACGGCCCAATCCAG...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGACAGGCACCCTCTTCTaGCTCAACACTGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVTGTLF*LNTGLQ
Trigger: CTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCATTTGGATGACGGCATaGGAGCGGGAGGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAIWMTA*EREESA
Trigger: TGCAGACTCCTCCCGCTCCCATGCCGTCATCCAAAT...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCTGTTCAGTGGCCACGTaGCTTGGTGAGATGTTGGCG +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGACSVAT*LGEMLA
Trigger: CGCCAACATCTCACCAAGCCACGTGGCCACTGAACA...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCACAGTGCTGGTCACCTaGATTGGGCCGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGTVLVT*IGPSAL
Trigger: CAGTGCAGACGGCCCAATCCAGGTGACCAGCACTGT...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCTCTGGGAGAAGGCCCTaGGGAAGTAGAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGASGRRP*GSRVLS
Trigger: AGAGAGAACTCTACTTCCTCAGGGCCTTCTCCCAGA...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGTGCTCCAGGGTGGGCTaGCGGAGTGTCCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKCSRVG*RSVPAV
Trigger: GACTGCAGGGACACTCCGTCAGCCCACCCTGGAGCA...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGGAGGCCTCAGACTGTTaGACAGAGCACTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVEASDC*TEHSVQ
Trigger: TTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTC...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGACTCGAGACACAAGCTaGTTCTGTACTGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVTRDTS*FCTGCT
Trigger: AGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTGTTCCCTCAGGGGCTaGGGTGGGCCCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVCSLRG*GGPVAG
Trigger: ACCTGCCACGGGCCCACCGCAGCCCCTGAGGGAACA...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCATGGAACTGAGGGACCTGAAGATGACGCTCTaGGATACTGACTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: VLRPGPPLEALLCMELRDLKMTL*DTDCFI
Trigger: GATAAAGCAGTCAGTATCCCAGAGCGTCATCTTCAG...GTCCCTCAGTTCCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGAAAAGGAATGTTGGGTaGGTGGCTGGTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVKRNVG*VAGQRM
Trigger: CATCCTCTGACCAGCCACCCACCCAACATTCCTTTT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCAGTGCTGCTCTTCTGTaGTTTATGGGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGASAALL*FMGSLE
Trigger: CTCCAGGGACCCCATAAACCACAGAAGAGCAGCACT...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGGCGGAGTCTCATTCGTaGGCTGACCCTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVAESHS*ADPLGA
Trigger: GGCCCCCAGAGGGTCAGCTCACGAATGAGACTCCGC...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTTTGGGCCGTCTGCACTaGCTTCTCTCAGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLLGRLH*LLSEVW
Trigger: CCACACCTCTGAGAGAAGTCAGTGCAGACGGCCCAA...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCGAGGACAGCCACAGGTaGCTAGTTGCTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGEDSHR*LVAEDT
Trigger: AGTGTCTTCAGCAACTAGGCACCTGTGGCTGTCCTC...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCTTTCTTGCACTTGGTaGACAGCTTACCACGCACTA +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVLSCTW*TAYHAL
Trigger: TAGTGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAG...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAACTGGGTGCTGACGGATaGGTGATGGGGACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKLGADG*VMGTEL
Trigger: CAGCTCTGTCCCCATCACCCATCCGTCAGCACCCAG...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGAGCCAGGAGCTGCCATaGAAGCATGAGAGTATCGGG +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGSQELP*KHESIG
Trigger: CCCGATACTCTCATGCTTCCATGGCAGCTCCTGGCT...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCCCCTCTGGCTGTCTTaGCTGTACTCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVPLWLS*LYSALW
Trigger: CCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTATTATCAGGGGGAGATaGGGACAGCCACAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLIIRGR*GQPQVP
Trigger: AGGCACCTGTGGCTGTCCTCATCTCCCCCTGATAAT...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCCCCTGGCGGTCAGATaGGGCACTGTCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCPLAVR*GTVRLT
Trigger: TGTCAGCCTGACAGTGCCTCATCTGACCGCCAGGGG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTTGTCTTTCTGCCACCTaGTTCTCAGGACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLCLSAT*FSGPCP
Trigger: GGGACAGGGTCCTGAGAAGCAGGTGGCAGAAAGACA...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGACAGTATGGCTTCTCTaGCAGGCTGTCTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGTVWLL*QAVSGR
Trigger: TCTCCCAGAGACAGCCTGGCAGAGAAGCCATACTGT...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGGTCTGCCTCCCTGCTaGGCAGCTTGTCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCGLPPC*AACQLG
Trigger: ACCCAGCTGACAAGCTGCCCAGCAGGGAGGCAGACC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGAAGCCACGTGGGGCTaGGGTGACGCTAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCEATWG*GDASIG
Trigger: GCCTATGCTAGCGTCACCCCAGCCCCACGTGGCTTC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGCTATCTGAAGCCACGTaGGGCTGGGGTGACGCTAGC +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKLSEAT*GWGDAS
Trigger: GCTAGCGTCACCCCAGCCCCACGTGGCTTCAGATAG...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCTTTTGGCATTGCCGATaGAAGAGTCCTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGFWHCR*KSPSGP
Trigger: AGGTCCTGAAGGACTCTTTCATCGGCAATGCCAAAA...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGGTCTCATTCGTGAGCTaGCCCTCTGGGGGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVVSFVS*PSGGLY
Trigger: GTACAGGCCCCCAGAGGGTCAGCTCACGAATGAGAC...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGCTTGGGCTGCAGCTGTaGTCGAGTGCTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKLGLQL*SSAALL
Trigger: CAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAG...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCCCTGTGGTGGGCGTTaGCAAAGGAGAGCTCAACTC +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVPCGGR*QRRAQL
Trigger: GAGTTGAGCTCTCCTTTGGCAACGCCCACCACAGGG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGGCCCCTTACTTGGGCTaGAGCTGTGATCGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRAPYLG*SCDRVL
Trigger: CAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGC...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCCCAGCACAGACTCCTaGAGGGCCCCCACCATCTCG +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLPSTDS*RAPTIS
Trigger: CGAGATGGTGGGGGCCCTGCAGGAGTCTGTGCTGGG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCCTAGGATCCTCTCCTaGGACAGCATGACCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGPRILS*DSMTVF
Trigger: AAAAACGGTCATGCTGTCCCAGGAGAGGATCCTAGG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGACTACTTCCTGTTCGTaGGGTGAGTGTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGTTSCS*GECRSR
Trigger: TCTGGACCTACACTCACCCCACGAACAGGAAGTAGT...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGGCGCTTGCTCCAGGGTaGGCTGACGGAGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLALAPG*ADGVSL
Trigger: CAGGGACACTCCGTCAGCCCACCCTGGAGCAAGCGC...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGGGCCTGGCCCACCCTTaGAGGCACTCCTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLGLAHP*RHSCAW
Trigger: CCATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCC...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGGGAGTTGGGATAGGCTaGGCCTTCAGGGGGATCACC +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVGVGIG*AFRGIT
Trigger: GGTGATCCCCCTGAAGGCCCAGCCTATCCCAACTCC...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCACCTGTCCTCGTTTTTaGTTTGCAAAGGCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGATCPRF*FAKASL
Trigger: TAGGCTTGCCTTTGCAAACCAAAAACGAGGACAGGT...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCCAGATCTTAATTCCTaGGATTTGATGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGPDLNS*DLMRRL
Trigger: CAGCCTGCGCATCAAATCTCAGGAATTAAGATCTGG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCATTTCGACTGGTAACTaGAGTGCAACACTTAATGCC +
Preference number: 4 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAISTGN*SATLNA
Trigger: GGCATTAAGTGTTGCACTTCAGTTACCAGTCGAAAT...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTGCCTTCTCCTGGGCCTaGGGCCCTGCTTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIAFSWA*GPAFPP
Trigger: GGGTGGGAAAGCAGGGCCTCAGGCCCAGGAGAAGGC...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAGGGAGGCATCCTTTCTaGGATCAAAGGAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKGRHPF*DQRKSL
Trigger: GAGGCTCTTCCTTTGATCTCAGAAAGGATGCCTCCC...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAATCTCCTGGGACAGCATaGCCGTTTTTCACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKSPGTA*PFFTVL
Trigger: CAGCACTGTGAAAAACGGTCATGCTGTCCCAGGAGA...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCCTGGTGTGCTCGGATaGCCACCTGCTGCGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLPGVLG*PPAALA
Trigger: AGCAAGCGCAGCAGGTGGTCATCCGAGCACACCAGG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTGACCACCCCATCCTCTaGTCCCCAAACTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLDHPIL*SPNLET
Trigger: AGTTTCTAAGTTTGGGGATCAGAGGATGGGGTGGTC...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTCAATCTCCAAGGGCTaGTGGGGCAGAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVSISKG*WGRAHP
Trigger: GGGGTGAGCTCTGCCCCATCAGCCCTTGGAGATTGA...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATGGACGTAGGCCTTCCTaGCTGTGGAGTTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNGRRPS*LWSWDR
Trigger: CCTATCCCAACTCCACAGTCAGGAAGGCCTACGTCC...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATGACGTACCTCCCTCATaGCCAGGGGGCGTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNDVPPS*PGGVFE
Trigger: TTCGAAAACGCCCCCTGGGCATGAGGGAGGTACGTC...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTCAGTGGCCCCAGTGCTaGGCTCCTTGCTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVQWPQC*APCCPL
Trigger: TAAAGGGCAGCAAGGAGCGCAGCACTGGGGCCACTG...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCTCCAGTGGCCCCAGTaGTGCGCTCCTTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIILQWPQ*CAPCCP
Trigger: AGGGCAGCAAGGAGCGCAGCACTGGGGCCACTGGAG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCAAGGACAGTTTTGTTaGCCATTCGATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVQGQFC*PFDFSQ
Trigger: CTGAGAAAAATCGAATGGGCAACAAAACTGTCCTTG...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGTGCTTCTGTACTGGCTaGACTGTCTGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGCFCTG*TVCTFL
Trigger: CAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCA...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCTAGAAAACAGACTCTaGTGTCTTTCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGLENRL*CLSATC
Trigger: GCAGGTGGCAGAAAGACAGCAGAGTCTGTTTTCTAG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTGAAGCATATTCAGCATaGGTGCCTAACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLEAYSA*VPNCPL
Trigger: TAGGGGGCAGTTAGGCACGCATGCTGAATATGCTTC...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCAACTGGGCCCCCTGTaGTCTCTGCCACTAGACTGT +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCQLGPL*SLPLDC
Trigger: ACAGTCTAGTGGCAGAGAGCACAGGGGGCCCAGTTG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGCTGACGGAGTGTCCCTaGAGTCTTGGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVLTECP*SLGRAA
Trigger: AGCTGCTCTCCCAAGACTGCAGGGACACTCCGTCAG...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCAGCAGCAGGCATTTATaGATCATTTGCCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGSSRHL*IICHKQ
Trigger: CTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCT...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCTCTTCTGTGGTTTATaGGGTCCCTGGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVLFCGL*GPWSPP
Trigger: GGGTGGACTCCAGGGACCCCATAAACCACAGAAGAG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGGGTGAAGGGCTTTCCTaGGAAACCCCAGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVGEGLS*ETPGAI
Trigger: GATGGCTCCTGGGGTTTCCCAGGAAAGCCCTTCACC...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGGCAGGACCAGCGTGTaGGTTCTGGTGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDGRTSV*VLVCAG
Trigger: CCCTGCACACACCAGAACCCACACGCTGGTCCTGCC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
3UTR CAA 72 bp TGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATaGCAGGAAGGGAAGGGAGCTGTAAATATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CDTGTLFCLNTG*QEGKGAVNIRP
Trigger: AGGCCTTATATTTACAGCTCCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS-3UTR TCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGTTAGTTTGCTTTGCCTaGAGGGAGTATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGLVCFA*REYGCV
Trigger: AACACACCCATACTCCCTTCAGGCAAAGCAAACTAA...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCTATGAAATCTACCTGTaGACAGTATGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGYEIYL*TVWLLC
Trigger: GCAGAGAAGCCATACTGTTCACAGGTAGATTTCATA...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGCTGAAGGTTTGTGTGTaGATTCTGTTTCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGLKVCV*ILFQRP
Trigger: AGGCCTCTGAAACAGAATTCACACACAAACCTTCAG...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGAGGCACTGTCAGGCTaGCAAAGGGTGACTGGACCA +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVEALSG*QRVTGP
Trigger: TGGTCCAGTCACCCTTTGTCAGCCTGACAGTGCCTC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGTGCTGCGCTCCTTGCTaGCCTTTAAGATCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVCCAPC*PLRSPA
Trigger: TGCAGGTGATCTTAAAGGGCAGCAAGGAGCGCAGCA...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTAGATGTTGGCGATCATaGAGGTTTTGGCATTGCCGA +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLRCWRS*RFWHCR
Trigger: TCGGCAATGCCAAAACCTGCATGATCGCCAACATCT...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGTGTCCCCACGTCTGGTaGAGGAAGAATGAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVCPHVW*RKNESS
Trigger: CGAAGACTCATTCTTCCTGCACCAGACGTGGGGACA...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTAGGTCTGCCTCCCTaGTGGGCAGCTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDLGLPP*WAACQL
Trigger: CAGCTGACAAGCTGCCCAGCAGGGAGGCAGACCTAG...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCAGCCCCGTCTCCTCTaGATCAGCATCATACTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCQPRLL*ISIILL
Trigger: GAGCAGTATGATGCTGATGCAGAGGAGACGGGGCTG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAACAGAGCACTCTGTTCAACTGCCAAGGTTCCCAACACAGACCCCTGAGAGGCGCTCTGAATTCGTTTTaGAGAGGAGTTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: EQSTLFNCQGSQHRPLRGALNSF*RGVSRC
Trigger: ACATCTGGAAACTCCTCTCCAAAACGAATTCAGAGC...GCCTCTCAGGGGTCTGTGTTGGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTTGGCTGGTCAGAGGATaGACCTTCCCTCTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCWLVRG*TFPLVE
Trigger: TTCCACGAGAGGGAAGGTCCATCCTCTGACCAGCCA...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAGTGACTGTGTCTCTTTaGTCTGGGGATCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKVTVSL*SGDPGT
Trigger: AGTTCCTGGATCCCCAGACCAAAGAGACACAGTCAC...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACTGTGTGGCTCACAACTaGGCCCCCTGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDCVAHN*APCALC
Trigger: GCAGAGAGCACAGGGGGCCCAGTTGTGAGCCACACA...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGTCATTAGAAGCCAGCTaGCTCATCAGCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKSLEAS*LISVSS
Trigger: GGAGGAGACGCTGATGAGCCAGCTGGCTTCTAATGA...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
3UTR CAA 72 bp AGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATaGATGTGTGACACAGGCACCCTCTTCTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: RGLSPEQKSGEK*MCDTGTLFCLN
Trigger: GTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGGGCCACGTGGCTTGGTaGGATGTTGGCGATCATGCA +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLGHVAW*DVGDHA
Trigger: TGCATGATCGCCAACATCTCACCAAGCCACGTGGCC...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTTGCAACGTGGGACAATaGGATAGTGAAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: LDQAASVSREPFNPLLGLCNVGQ*DSETIF
Trigger: GAAGATGGTTTCACTATCTCATTGTCCCACGTTGCA...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCAGGTGCCTAGTTGCTaGAGACACTGGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLQVPSC*RHWQGC
Trigger: GCAGCCTTGCCAGTGTCTTCAGCAACTAGGCACCTG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGCCATATGTATGGTGGTaGAGGGCTTTCCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKPYVWW*RAFLGN
Trigger: GTTTCCCAGGAAAGCCCTTCACCACCATACATATGG...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTCAGCGTCTCCTCCTTaGAGCCGAGCTCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVSASPP*SRAQPF
Trigger: AAATGGCTGAGCTCGGCTTCAAGGAGGAGACGCTGA...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGGTCTTCTCTGTCTTGTaGCCTCTGACCTCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRVFSVL*PLTSRL
Trigger: TAGCCTAGAGGTCAGAGGTCACAAGACAGAGAAGAC...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGCTGCCATGGAAGCATaGGAGTATCGGGCATTGTAC +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCAAMEA*EYRALY
Trigger: GTACAATGCCCGATACTCTCATGCTTCCATGGCAGC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAGTTGGAAGAGACGTTTaGGGTCGTTCATGTCATGGA +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKVGRDV*GRSCHG
Trigger: TCCATGACATGAACGACCGCAAACGTCTCTTCCAAC...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATCAGTGCTGCGCTCCTTaGTGCCCTTTAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNQCCAP*CPLRSP
Trigger: AGGTGATCTTAAAGGGCAGCAAGGAGCGCAGCACTG...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATCTGGGGATGGCAAGTTaGCCTCATTCTCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNLGMAS*PHSPQK
Trigger: TTTCTGGGGAGAATGAGGGCAACTTGCCATCCCCAG...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTGCTCGGATGACCACCTaGTGCGCTTGCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIARMTT*CACSRV
Trigger: CACCCTGGAGCAAGCGCAGCAGGTGGTCATCCGAGC...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTGTGGGTTCTGGTGTGTaGAGGGAGGACCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFVGSGV*REDLAE
Trigger: CTCTGCCAGGTCCTCCCTGCACACACCAGAACCCAC...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGATAGGAGCCAGGAGCTaGCATGGAAGCATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKIGARS*HGSMRV
Trigger: TACTCTCATGCTTCCATGGCAGCTCCTGGCTCCTAT...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACTGTTGGGTGGGTGGCTaGTCAGAGGATGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDCWVGG*SEDGPS
Trigger: GGAAGGTCCATCCTCTGACCAGCCACCCACCCAACA...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGGAATGTTGGGTGGGTaGCTGGTCAGAGGATGGACC +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDGMLGG*LVRGWT
Trigger: GGTCCATCCTCTGACCAGCCACCCACCCAACATTCC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGTGAAGGACTCCCTCTaGAGCCACCCCTTTTACCAG +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVVKDSL*SHPFYQ
Trigger: CTGGTAAAAGGGGTGGCTCCAGAGGGAGTCCTTCAC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACTACTCAGCCCTGTGGTaGGCGTTGCCAAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDYSALW*ALPKES
Trigger: GCTCTCCTTTGGCAACGCCCACCACAGGGCTGAGTA...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTACTCAGCCCTGTaGTGGGCGTTGCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDLYSAL*WALPKE
Trigger: CTCCTTTGGCAACGCCCACCACAGGGCTGAGTACAG...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGTGTGTCTCTTTGGTCTaGGGATCCAGGAACTGCAAC +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKCVSLV*GSRNCN
Trigger: GTTGCAGTTCCTGGATCCCCAGACCAAAGAGACACA...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCGTTTTTCACAGTGCTaGTCACCTGGATTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCRFSQC*SPGLGR
Trigger: ACGGCCCAATCCAGGTGACCAGCACTGTGAAAAACG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGAGACCCTTCGTTGTCTaGGTTCTCCAGGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVRPFVV*VLQEGH
Trigger: ATGTCCCTCCTGGAGAACCCAGACAACGAAGGGTCT...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGCCAGATGGCACTGTGTaGCTCACAACTGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWPDGTV*LTTGPP
Trigger: AGGGGGCCCAGTTGTGAGCCACACAGTGCCATCTGG...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAGAGCCAGTAGACTCTaGTTTATTTCTGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKRASRL*FISAPS
Trigger: GGAAGGTGCAGAAATAAATCAGAGTCTACTGGCTCT...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGAGTCCTTCAGGACCTaGGTTAGTTTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCESFRT*VSLLCL
Trigger: CAGGCAAAGCAAACTAACTCAGGTCCTGAAGGACTC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGCAGGGGCTGCCACTGTaGGTGACTGCTGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWQGLPL*VTAEIP
Trigger: TGGGATTTCAGCAGTCACTCACAGTGGCAGCCCCTG...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACAATGACCCACTCTTGTaGAGGACTCCCTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDNDPLL*RTPSGA
Trigger: GGCTCCAGAGGGAGTCCTTCACAAGAGTGGGTCATT...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCTGGTGCAGGAAGAATaGGTCTTCGCTATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCLVQEE*VFAILQ
Trigger: CTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGGCAAGGCTGCCTCTTaGTCACCAGATGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIGKAAS*SPDGTV
Trigger: CACAGTGCCATCTGGTGATCAAGAGGCAGCCTTGCC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGTTGCAGGGCAACTTaGTGGGGTCTGTGGACAAAC +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVCCRAT*WGLWTN
Trigger: GTTTGTCCACAGACCCCATCAAGTTGCCCTGCAACA...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGAGTCAGGAGAAAAATTaGTGTGTGACACAGGCACCC +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVSQEKN*CVTQAP
Trigger: GGGTGCCTGTGTCACACATCAATTTTTCTCCTGACT...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGCAGGCTGACAAAGGGTaGCTGGACCAGGCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWQADKG*LDQAAS
Trigger: ACTAGCAGCCTGGTCCAGTCACCCTTTGTCAGCCTG...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCGGAGCGGGAGGAGTCTaGATTAACTCCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFGAGGV*INSSGP
Trigger: GGGGCCACTGGAGTTAATGCAGACTCCTCCCGCTCC...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATGCTGTGATCGAGTGCTaGTCTTCTGTGGTTTATGGG +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNAVIEC*SSVVYG
Trigger: CCCATAAACCACAGAAGAGCAGCACTCGATCACAGC...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCAGCTGTTCCTGGTGTaGTCGGATGACCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIQLFLV*SDDHLL
Trigger: CAGCAGGTGGTCATCCGAGCACACCAGGAACAGCTG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGGCTTGGTGAGATGTTaGCGATCATGCAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCGLVRC*RSCRFW
Trigger: CCAAAACCTGCATGATCGCCAACATCTCACCAAGCC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGAAGCTGCTTCTGTACTaGCTGCACTGTCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVKLLLY*LHCLHF
Trigger: AAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTT...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCCCAGCGTGTGGGTTCTaGTGTGTGCAGGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFPACGF*CVQGGP
Trigger: AGGTCCTCCCTGCACACACCAGAACCCACACGCTGG...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGGACGCTCTGGGATACTaGCTGCTTTATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKDALGY*LLYLLL
Trigger: AAGAAGAAGATAAAGCAGTCAGTATCCCAGAGCGTC...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATCTTTCTTTAGTTCTTTaGCCCGGTCAGCATAGCGCA +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNLSLVL*PGQHSA
Trigger: TGCGCTATGCTGACCGGGTCAAAGAACTAAAGAAAG...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGACTGTGAGTGACTGCTaGAATCCCAGCTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKTVSDC*NPSLTF
Trigger: AAAAGTCAAGCTGGGATTTCAGCAGTCACTCACAGT...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGGCTGCCACTGTGAGTaGCTGCTGAAATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIGCHCE*LLKSQL
Trigger: AAGCTGGGATTTCAGCAGTCACTCACAGTGGCAGCC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTTCACAGGGCTAGCATaGATGACCCACTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVFTGLA*MTHSCE
Trigger: TTCACAAGAGTGGGTCATTCATGCTAGCCCTGTGAA...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCAGGCAGAACTTGGCTaGAGGTTTGTGTGTGAATTC +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCQAELG*RFVCEF
Trigger: GAATTCACACACAAACCTTCAGCCAAGTTCTGCCTG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAATTGAGTGAGGTCAACTaGTTCTTTCTTCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKLSEVN*FFLLMH
Trigger: GTGCATGAGAAGAAAGAAGCAGTTGACCTCACTCAA...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTACTGGCTGCACTGTCTaGACTTTCTTGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVTGCTV*TFLHLV
Trigger: CACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGT...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTCTGCCACTAGACTGTaGGTAGCCCCATCCTGGACC +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYISATRL*VAPSWT
Trigger: GGTCCAGGATGGGGCTACGCACAGTCTAGTGGCAGA...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GAGAGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAACATTTATGCATCATTTaGCACAAGCAGAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: ESIGHCTEAFHPSKSQEKHLCII*HKQRMG
Trigger: TCCCATCCTCTGCTTGTGGCAAATGATGCATAAATG...TTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCCTCTCCTTCTGATGTaGCGGGATGTTTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLPLLLM*RDVCPS
Trigger: GCTTGGACAAACATCCCGCCACATCAGAAGGAGAGG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTCTGTTGGAGGAGAGGTaGCTGTTGGAACTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFLLEER*LLELLV
Trigger: CACCAGCAGTTCCAACAGCCACCTCTCCTCCAACAG...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTGCTGGTCACCTGGATTaGGCCGTCTGCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIAGHLD*AVCTDF
Trigger: GAAGTCAGTGCAGACGGCCCAATCCAGGTGACCAGC...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGTGGCTCCTCAGACTCTaGATACACTTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVWLLRL*IHLDFR
Trigger: TCTGAAATCCAAGTGTATCCAGAGTCTGAGGAGCCA...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCTTCTGCCTCAACACTaGATTGCAGGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLLLPQH*IAGREG
Trigger: CCCTTCCCTTCCTGCAATCCAGTGTTGAGGCAGAAG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
3UTR CAA 72 bp TTTGTGTGTGAATTCTGTTTCAGAGGCCTCAGACTGTaGAACAGAGCACTCTGTTCAACTGCCAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FVCEFCFRGLRL*NRALCSTAKVP
Trigger: GGGAACCTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAATTCACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTTTAATTCCTGAGATTTaGTGCGCAGGCTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCLIPEI*CAGCLS
Trigger: AGACAAGCAGCCTGCGCATCAAATCTCAGGAATTAA...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGTTCGAACACAAACTCTaGTTTTCTCCATCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRFEHKL*FSPSQS
Trigger: GGACTGAGATGGAGAAAATCAGAGTTTGTGTTCGAA...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTCCTCCCTCTCCTTCTaGTGTGGCGGGATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYISSLSF*CGGMFV
Trigger: GACAAACATCCCGCCACATCAGAAGGAGAGGGAGGA...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTTGCTTTGTGGCCCTCTaGCTAGAGATGTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCCFVAL*LEMCEK
Trigger: TTTTTCACACATCTCTAGTCAGAGGGCCACAAAGCA...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTTCGGGCCAAGGCCGTaGCTCATGAATCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIFGPRP*LMNLHL
Trigger: CAAATGGAGATTCATGAGTCACGGCCTTGGCCCGAA...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGTGTTCCTGATCCAGTaGTCGGATACATTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVVFLIQ*SDTFLQ
Trigger: CTGAAGGAATGTATCCGAGCACTGGATCAGGAACAC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGCAGCTGTGATCGAGTaGTGCTCTTCTGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVAAVIE*CSSVVY
Trigger: ATAAACCACAGAAGAGCAGCACTCGATCACAGCTGC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTTCCTCGTTTTTGGTTTaGAAAGGCAAGCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCSSFLV*KGKPRL
Trigger: CAGTCTAGGCTTGCCTTTGCAAACCAAAAACGAGGA...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTCCCTGTCCCCACGTCTaGTGCAGGAAGAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIPCPHV*CRKNES
Trigger: AGACTCATTCTTCCTGCACCAGACGTGGGGACAGGG...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGGAAACCATCTTCCTCTaGGGATGGCAAGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWETIFL*GWQVAL
Trigger: GAGGGCAACTTGCCATCCCCAGAGGAAGATGGTTTC...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGCCAGGAACTGCAACGTaGGACAATGAGATAGTGAAA +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVPGTAT*DNEIVK
Trigger: TTTCACTATCTCATTGTCCCACGTTGCAGTTCCTGG...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTACAGTCTCTCTGCTCTaGCAGGCCTCTCCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYITVSLL*QASPRS
Trigger: AGACCTAGGAGAGGCCTGCCAGAGCAGAGAGACTGT...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGCTACCCATGTGTTCGTaGGAGAAAAGTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVLPMCS*EKSTVS
Trigger: AGAGACTGTACTTTTCTCCCACGAACACATGGGTAG...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATAAAGTAATTGGCACCTaGAGGCTACTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNKVIGT*RLLCLP
Trigger: GGGAAGACAAAGTAGCCTCCAGGTGCCAATTACTTT...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCTGACAAAGGGTGACTaGACCAGGCTGCTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIILTKGD*TRLLVS
Trigger: AGACACTAGCAGCCTGGTCCAGTCACCCTTTGTCAG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCTGAAGTGTTCTGTCTaGTACAAGAATGAGGGATTC +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCLKCSV*YKNEGF
Trigger: GAATCCCTCATTCTTGTATCAGACAGAACACTTCAG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGGCAGAATATATTGAGTaGGGTCAACTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRAEYIE*GQLLLS
Trigger: AGAAAGAAGCAGTTGACCTCACTCAATATATTCTGC...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGCTTTGTCTGTCTATCTaGGTCCCTTGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWLCLSI*VPCICC
Trigger: GCAGCAGATGCAAGGGACTCAGATAGACAGACAAAG...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGGTATGGGTGTGTTCCTaGTCCAGTGCTCGGATACAT +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWVWVCS*SSARIH
Trigger: ATGTATCCGAGCACTGGATCAGGAACACACCCATAC...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCCATAGCGCAAGGTGTTaGGAGTGTGTTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFHSARC*ECVQWP
Trigger: TGGCCACTGAACACACTCTCAACACCTTGCGCTATG...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTAGACACTGGCAAGGCTaGCTCTTGATCACCAGATGG +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIRHWQG*LLITRW
Trigger: CCATCTGGTGATCAAGAGGCAGCCTTGCCAGTGTCT...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTAAAGTACAGTCTCTCTaGTCTGGCAGGCCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIKVQSL*SGRPLL
Trigger: TAGGAGAGGCCTGCCAGAGCAGAGAGACTGTACTTT...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGACAAACCAAACTCCTaGCAACCAAGCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDDKPNS*QPSLVG
Trigger: TCCTACAAGGCTTGGTTGGCAGGAGTTTGGTTTGTC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTTCCCTGTCCTGAGCTaGTTCCTGCTAAAAAGATAC +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVFPVLS*FLLKRY
Trigger: GTATCTTTTTAGCAGGAAGCAGCTCAGGACAGGGAA...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTGCACTTTCTTGCACTTaGTGGACAGCTTACCACGCA +
Preference number: 4 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFALSCT*WTAYHA
Trigger: TGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGC...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGTCTGGGGGCCTGTACTaGCGTAAAGACCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWSGGLY*RKDLFS
Trigger: ACTGAAAAGGTCTTTACGCCAGTACAGGCCCCCAGA...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCCAGAAACCTCACTTTaGGAGGCATCCTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLPETSL*EASFLR
Trigger: TCTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
3UTR CAA 72 bp CTGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTaGGCTGAAGGTTTGTGTGTGAATTCTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPAKKIHSRQN*AEGLCVNSVSE
Trigger: CTCTGAAACAGAATTCACACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS-3UTR TCA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATAATTCATCTATTTTCTaGAGGCCAAGGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNNSSIF*RPRAVK
Trigger: TTTCACTGCCCTTGGCCTTCAGAAAATAGATGAATT...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGCATCAGCATCATACTaGTCACTACCCATGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIASASY*SLPMCS
Trigger: CGAACACATGGGTAGTGAGCAGTATGATGCTGATGC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTAGGAATCACCAGCTGTaGCATTCAGAATTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVRNHQL*HSEFLF
Trigger: AAACAGGAATTCTGAATGCCACAGCTGGTGATTCCT...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTCTCTTGATCACCAGATaGCACTGTGTGGCTCACAAC +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYILLITR*HCVAHN
Trigger: GTTGTGAGCCACACAGTGCCATCTGGTGATCAAGAG...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGGAAGGCCAAGGGCAGTaGAATGAGAATAATACTGTG +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWEGQGQ*NENNTV
Trigger: CACAGTATTATTCTCATTTCACTGCCCTTGGCCTTC...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGACCTGCAGAATATATTaGGTGAGGTCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLTCRIY*VRSTAS
Trigger: AGAAGCAGTTGACCTCACTCAATATATTCTGCAGGT...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGCTGAATCTTTGATCTaGATTTGGATGACGGCATGG +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIAESLI*IWMTAW
Trigger: CCATGCCGTCATCCAAATTCAGATCAAAGATTCAGC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTCTGACTAGAGATGTGTaGAAAAGAATCTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCLTRDV*KRIFTE
Trigger: TTCAGTGAAGATTCTTTTTCACACATCTCTAGTCAG...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTATAATTTTGATAAGTTaGAAGAGACGTTTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCIILIS*KRRLRS
Trigger: CGACCGCAAACGTCTCTTCCAACTTATCAAAATTAT...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGTATTTTAACTTCTGTTaGAGGAGAGGTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLYFNFC*RRGGCW
Trigger: CCAACAGCCACCTCTCCTCCAACAGAAGTTAAAATA...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGTCCCACTTGAGCTTTTaGCTAGACTGGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWSHLSF*LDWVFE
Trigger: TTCAAAGACCCAGTCTAGCCAAAAGCTCAAGTGGGA...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTGCCACAAGCAGAGGATaGGATTTAAACTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIATSRG*DLNCFT
Trigger: GGTGAAACAGTTTAAATCCCATCCTCTGCTTGTGGC...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCATCTGCTGCTGTCAGTaGCACATCAAGTCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFICCCQ*HIKSRF
Trigger: AAACCTTGACTTGATGTGTCACTGACAGCAGCAGAT...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGGCTAGACTGGGTCTTTaGAGGTTTTTAGTGATCATG +
Preference number: 4 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWARLGL*RFLVIM
Trigger: CATGATCACTAAAAACCTTCAAAGACCCAGTCTAGC...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGCTCTGGGATACTGACTaGTTTATCTTCTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: FSISELSSHFRPVLVFGLLWDTD*FIFFLH
Trigger: ATGCAAGAAGAAGATAAAGCAGTCAGTATCCCAGAG...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCAAAATTCAGCTGTCTaGGAGGGCCAGATCTTAATT +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIQNSAV*EGQILI
Trigger: AATTAAGATCTGGCCCTCGCAGACAGCTGAATTTTG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR GCA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGTTTCAAACCCATCATTaGTGGCATTTCTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVFQTHH*WHFCLY
Trigger: ATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAA...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTCAAACCCATCATTGCTaGCATTTCTGTCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVQTHHC*HFCLYC
Trigger: ACAATAAAGACAGAAATGCCAGCAATGATGGGTTTG...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGTTTTTGTATGGTACTaGGAATCATCTGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDVFVWY*ESSGSM
Trigger: CATGCTACCAGATGATTCCCAGTACCATACAAAAAC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTGACCTTTTCAGTGGTTaGTATTTTAACTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RFLFRSFLPTSDLSSFLVDLFSG*YFNFCW
Trigger: CCAACAGAAGTTAAAATACCAACCACTGAAAAGGTC...AACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCTCAAGTTCCTCTACTTaGGCTCCATCATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFSSSST*APSWFS
Trigger: TGAAAACCATGATGGAGCCCAAGTAGAGGAACTTGA...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CCA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTATTCCTGTTTTTGTATaGTACTGGGAATCATCTGGT +
Preference number: 4 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIIPVFV*YWESSG
Trigger: ACCAGATGATTCCCAGTACCATACAAAAACAGGAAT...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR TCA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTCCATAGTTATACCCTaGAACATGAGAGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYISIVIP*NMRDSL
Trigger: CAAAGAATCTCTCATGTTTCAGGGTATAACTATGGA...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
3UTR CAA 72 bp GATAGAATAGGGTTCATTCCTAAAGTAAGTAAGTTTTaGTCCTTGACCTTAATACTGTGCCATTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: DRIGFIPKVSKF*SLTLILCHCPT
Trigger: AGTGGGACAATGGCACAGTATTAAGGTCAAGGACAAAAACTTACTTACTTTAGGAATGAACCCTATTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.6
CDS GCA 90 bp TCGGCACAGGGTCTGGCTCTAAGACGGCACTGTTCCCTCAGGGGCTaGGGTGGGCCCGTGGCAGGTGAGATAGAGCTGCAGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SAQGLALRRHCSLRG*GGPVAGEIELQLAP
Trigger: AGGAGCCAGCTGCAGCTCTATCTCACCTGCCACGGGCCCACCGCAGCCCCTGAGGGAACAGTGCCGTCTTAGAGCCAGACCCTGTGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp GGCACCTGGTCCGGCCTCGGTCCAAACTCCTCGGTCTGCCCTGTCTaGGAAGAGGAGAAGACAATGCCGTCGGGAGTGAGCCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GTWSGLGPNSSVCPV*EEEKTMPSGVSPKA
Trigger: GGCTTTGGGGCTCACTCCCGACGGCATTGTCTTCTCCTCTTCTCAGACAGGGCAGACCGAGGAGTTTGGACCGAGGCCGGACCAGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684219.1
CDS GCA 90 bp GACCACCTGCTGCGCTTGCTCCAGGGTGGGCTGACGGAGTGTCCCTaGAGTCTTGGGAGAGCAGCTGGGAACCAAGGGAGAACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: DHLLRLLQGGLTECP*SLGRAAGNQGRTWP
Trigger: AGGCCAAGTTCTCCCTTGGTTCCCAGCTGCTCTCCCAAGACTGCAGGGACACTCCGTCAGCCCACCCTGGAGCAAGCGCAGCAGGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp TCTCCTAGGTCTGCCTCCCTGCTGGGCAGCTTGTCAGCTGGGTGCTaGCGGATGGGTGATGGGGACAGAGCTGGAAGATCACCACCAGGC +
Preference number: 5 (lower is better)
Translates to: SPRSASLLGSLSAGC*RMGDGDRAGRSPPG
Trigger: GCCTGGTGGTGATCTTCCAGCTCTGTCCCCATCACCCATCCGTCAGCACCCAGCTGACAAGCTGCCCAGCAGGGAGGCAGACCTAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp AAGACGGCACTGTTCCCTCAGGGGCTGCGGTGGGCCCGTGGCAGGTaGGATAGAGCTGCAGCTGGCTCCTCAGACTCTGGATACACTTGG +
Preference number: 5 (lower is better)
Translates to: KTALFPQGLRWARGR*DRAAAGSSDSGYTW
Trigger: CCAAGTGTATCCAGAGTCTGAGGAGCCAGCTGCAGCTCTATCTCACCTGCCACGGGCCCACCGCAGCCCCTGAGGGAACAGTGCCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp GTGCTCTCTGCCACTAGACTGTGCGTAGCCCCATCCTGGACCAGCTaGTCCGAGGGAGGAGACCCTTCGTTGTCTGGGTTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VLSATRLCVAPSWTS*SEGGDPSLSGFSRR
Trigger: CCTCCTGGAGAACCCAGACAACGAAGGGTCTCCTCCCTCGGAGCAGCTGGTCCAGGATGGGGCTACGCACAGTCTAGTGGCAGAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp GCTGCGCTTGCTCCAGGGTGGGCTGACGGAGTGTCCCTGCAGTCTTaGGAGAGCAGCTGGGAACCAAGGGAGAACTTGGCCTTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: AALAPGWADGVSLQS*ESSWEPRENLALLS
Trigger: GCTTAGCAAGGCCAAGTTCTCCCTTGGTTCCCAGCTGCTCTCCCAAGACTGCAGGGACACTCCGTCAGCCCACCCTGGAGCAAGCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp CAAGCTTCAGAGGCAGGCCTAGCAGGCGTGCCCCTCTGGCTGTCTTaGCTGTACTCAGCCCTGTGGTGGGCGTTGCCAAAGGAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: QASEAGLAGVPLWLS*LYSALWWALPKESS
Trigger: TGAGCTCTCCTTTGGCAACGCCCACCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGCACGCCTGCTAGGCCTGCCTCTGAAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp GCTCCAGTCCACGGGCCCCTTACTTGGGCTGCAGCTGTGATCGAGTaGTGCTCTTCTGTGGTTTATGGGGTCCCTGGAGTCCACCCAGCT +
Preference number: 5 (lower is better)
Translates to: APVHGPLTWAAAVIE*CSSVVYGVPGVHPA
Trigger: AGCTGGGTGGACTCCAGGGACCCCATAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGGACTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp GTCTCCTCCTTGAAGCCGAGCTCAGCCATTTCATCCAGCTGTTCCTaGTGTGCTCGGATGACCACCTGCTGCGCTTGCTCCAGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VSSLKPSSAISSSCS*CARMTTCCACSRVG
Trigger: GCCCACCCTGGAGCAAGCGCAGCAGGTGGTCATCCGAGCACACCAGGAACAGCTGGATGAAATGGCTGAGCTCGGCTTCAAGGAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp TTCTCTCTGCTCCAGTCCACGGGCCCCTTACTTGGGCTGCAGCTGTaGTCGAGTGCTGCTCTTCTGTGGTTTATGGGGTCCCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FSLLQSTGPLLGLQL*SSAALLWFMGSLES
Trigger: GGACTCCAGGGACCCCATAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGGACTGGAGCAGAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp GCATGCGTGCCTAACTGCCCCCTAGGATCCTCTCCTGGGACAGCATaGCCGTTTTTCACAGTGCTGGTCACCTGGATTGGGCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ACVPNCPLGSSPGTA*PFFTVLVTWIGPSA
Trigger: TGCAGACGGCCCAATCCAGGTGACCAGCACTGTGAAAAACGGTCATGCTGTCCCAGGAGAGGATCCTAGGGGGCAGTTAGGCACGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp CCAGTCCACGGGCCCCTTACTTGGGCTGCAGCTGTGATCGAGTGCTaGTCTTCTGTGGTTTATGGGGTCCCTGGAGTCCACCCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: PVHGPLTWAAAVIEC*SSVVYGVPGVHPAF
Trigger: AAAAGCTGGGTGGACTCCAGGGACCCCATAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp ACTGCTCACTACCCATGTGTTCGTGGGAGAAAAGTACAGTCTCTCTaGTCTGGCAGGCCTCTCCTAGGTCTGCCTCCCTGCTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TAHYPCVRGRKVQSL*SGRPLLGLPPCWAA
Trigger: AGCTGCCCAGCAGGGAGGCAGACCTAGGAGAGGCCTGCCAGAGCAGAGAGACTGTACTTTTCTCCCACGAACACATGGGTAGTGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCCAGTGGCCACGTGGCTaGGTGAGATGTTGGCGATCA +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAQWPRG*VRCWRS
Trigger: TGATCGCCAACATCTCACCAAGCCACGTGGCCACTG...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS GCA 90 bp TGCCCCTCTGGCTGTCTTGACTGTACTCAGCCCTGTGGTGGGCGTTaGCAAAGGAGAGCTCAACTCGAGACACAAGCTGCTTCTGTACTG +
Preference number: 5 (lower is better)
Translates to: CPSGCLDCTQPCGGR*QRRAQLETQAASVL
Trigger: CAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCTCTCCTTTGGCAACGCCCACCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp CTCCTGGGCCCAGAGCTGGTCAGCCACATCACTACTTCCTGTTCGTaGGGTGAGTGTAGGTCCAGAATGGGGTACCCCCATATGTATGGT +
Preference number: 5 (lower is better)
Translates to: LLGPELVSHITTSCS*GECRSRMGYPHMYG
Trigger: ACCATACATATGGGGGTACCCCATTCTGGACCTACACTCACCCCACGAACAGGAAGTAGTGATGTGGCTGACCAGCTCTGGGCCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCCTCCAGGGTGTTCCTTaGCTTTGTGGCCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGALQGVP*LCGPLT
Trigger: AGTCAGAGGGCCACAAAGCAAAGGAACACCCTGGAG...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCCCAGAAACCTCACTTaGGGAGGCATCCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVPRNLT*GGILSE
Trigger: CTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGGG...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGGAACCAAGGGAGAACTaGGCCTTGCTAAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVEPREN*ALLSTL
Trigger: CAAGGTGCTTAGCAAGGCCAAGTTCTCCCTTGGTTC...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp CACCTGCTTCTCAGGACCCTGTCCCCACGTCTGGTGCAGGAAGAATaGGTCTTCGCTATTCTCCAGGGTGTTCCTTTGCTTTGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: HLLLRTLSPRLVQEE*VFAILQGVPLLCGP
Trigger: AGGGCCACAAAGCAAAGGAACACCCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp ATCTTTGATCTGAATTTGGATGACGGCATGGGAGCGGGAGGAGTCTaGATTAACTCCAGTGGCCCCAGTGCTGCGCTCCTTGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: IFDLNLDDGMGAGGV*INSSGPSAALLAAL
Trigger: AAGGGCAGCAAGGAGCGCAGCACTGGGGCCACTGGAGTTAATGCAGACTCCTCCCGCTCCCATGCCGTCATCCAAATTCAGATCAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp GAGACACAAGCTGCTTCTGTACTGGCTGCACTGTCTGCACTTTCTTaGACTTGGTGGACAGCTTACCACGCACTAGGCCTTCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ETQAASVLAALSALS*TWWTAYHALGLLLG
Trigger: GCCCAGGAGAAGGCCTAGTGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp CTGCTGGTGATAGAAACGCAGATGTTCCTCCCTCTCCTTCTGATGTaGCGGGATGTTTGTCCAAGCTTCAGAGGCAGGCCTAGCAGGCGT +
Preference number: 5 (lower is better)
Translates to: LLVIETQMFLPLLLM*RDVCPSFRGRPSRR
Trigger: ACGCCTGCTAGGCCTGCCTCTGAAGCTTGGACAAACATCCCGCCACATCAGAAGGAGAGGGAGGAACATCTGCGTTTCTATCACCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp TCCTGGGACAGCATGACCGTTTTTCACAGTGCTGGTCACCTGGATTaGGCCGTCTGCACTGACTTCTCTCAGAGGTGTGGTGACTGTGTC +
Preference number: 5 (lower is better)
Translates to: SWDSMTVFHSAGHLD*AVCTDFSQRCGDCV
Trigger: GACACAGTCACCACACCTCTGAGAGAAGTCAGTGCAGACGGCCCAATCCAGGTGACCAGCACTGTGAAAAACGGTCATGCTGTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp GCGCACAGTTCCTTTCACAGGGCTAGCATGAATGACCCACTCTTGTaGAGGACTCCCTCTGGAGCCACCCCTTTTACCAGAGACCTTAGG +
Preference number: 5 (lower is better)
Translates to: AHSSFHRASMNDPLL*RTPSGATPFTRDLR
Trigger: CCTAAGGTCTCTGGTAAAAGGGGTGGCTCCAGAGGGAGTCCTTCACAAGAGTGGGTCATTCATGCTAGCCCTGTGAAAGGAACTGTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp TGGACAGCTTACCACGCACTAGGCCTTCTCCTGGGCCTGAGGCCCTaGTTTCCCACCCAAGGACAGTTTTGTTGCCCATTCGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: WTAYHALGLLLGLRP*FPTQGQFCCPFDFS
Trigger: AGAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAGGCCCAGGAGAAGGCCTAGTGCGTGGTAAGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp TGTCTTTCTGCCACCTGCTTCTCAGGACCCTGTCCCCACGTCTGGTaGAGGAAGAATGAGTCTTCGCTATTCTCCAGGGTGTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: CLSATCFSGPCPHVW*RKNESSLFSRVFLC
Trigger: GCAAAGGAACACCCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTGGCAGAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp TTACCAGAGACCTTAGGTGCAGAAGTAAAAGGAATGTTGGGTGGGTaGCTGGTCAGAGGATGGACCTTCCCTCTCGTGGAACCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LPETLGAEVKGMLGG*LVRGWTFPLVEPGA
Trigger: AGCCCCTGGTTCCACGAGAGGGAAGGTCCATCCTCTGACCAGCCACCCACCCAACATTCCTTTTACTTCTGCACCTAAGGTCTCTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp TGCTGTCTTTCTGCCACCTGCTTCTCAGGACCCTGTCCCCACGTCTaGTGCAGGAAGAATGAGTCTTCGCTATTCTCCAGGGTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: CCLSATCFSGPCPHV*CRKNESSLFSRVFL
Trigger: AAGGAACACCCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTGGCAGAAAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCAGTTGGAAGAGACGTTaGCGGTCGTTCATGTCATGG +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGASWKRR*RSFMSW
Trigger: CCATGACATGAACGACCGCAAACGTCTCTTCCAACT...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCGCGATCATGCAGGTTTaGGCATTGCCGATGAAAGAG +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAAIMQV*ALPMKE
Trigger: CTCTTTCATCGGCAATGCCAAAACCTGCATGATCGC...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCCACGGGCCCCTTACTaGGGCTGCAGCTGTGATCGA +
Preference number: 5 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVPRAPY*GCSCDR
Trigger: TCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCGACCTGTCCTCGTTTTaGGTTTGCAAAGGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGADLSSF*VCKGKP
Trigger: AGGCTTGCCTTTGCAAACCAAAAACGAGGACAGGTC...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS GCA 90 bp AGCTCAACTCGAGACACAAGCTGCTTCTGTACTGGCTGCACTGTCTaGACTTTCTTGCACTTGGTGGACAGCTTACCACGCACTAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSTRDTSCFCTGCTV*TFLHLVDSLPRTRP
Trigger: AGGCCTAGTGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp CCAAAGGAGAGCTCAACTCGAGACACAAGCTGCTTCTGTACTGGCTaGACTGTCTGCACTTTCTTGCACTTGGTGGACAGCTTACCACGC +
Preference number: 5 (lower is better)
Translates to: PKESSTRDTSCFCTG*TVCTFLHLVDSLPR
Trigger: GCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCTCTCCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp AGCATGACCGTTTTTCACAGTGCTGGTCACCTGGATTGGGCCGTCTaGACTGACTTCTCTCAGAGGTGTGGTGACTGTGTCTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: SMTVFHSAGHLDWAV*TDFSQRCGDCVSLV
Trigger: GACCAAAGAGACACAGTCACCACACCTCTGAGAGAAGTCAGTGCAGACGGCCCAATCCAGGTGACCAGCACTGTGAAAAACGGTCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp GTCTCCTCTGCATCAGCATCATACTGCTCACTACCCATGTGTTCGTaGGAGAAAAGTACAGTCTCTCTGCTCTGGCAGGCCTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: VSSASASYCSLPMCS*EKSTVSLLWQASPR
Trigger: CCTAGGAGAGGCCTGCCAGAGCAGAGAGACTGTACTTTTCTCCCACGAACACATGGGTAGTGAGCAGTATGATGCTGATGCAGAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGCACCCAAGGACAGTTTaGTTGCCCATTCGATTTTTC +
Preference number: 5 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVHPRTV*LPIRFF
Trigger: GAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTG...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGGCCCCTCTGGCTGTCTaGACTGTACTCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVAPLAV*TVLSPV
Trigger: CACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGC...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGGGAGGAGACCCTTCGTaGTCTGGGTTCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRGGDPS*SGFSRR
Trigger: CCTCCTGGAGAACCCAGACAACGAAGGGTCTCCTCC...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS CCA 90 bp GTTGCCAAAGGAGAGCTCAACTCGAGACACAAGCTGCTTCTGTACTaGCTGCACTGTCTGCACTTTCTTGCACTTGGTGGACAGCTTACC +
Preference number: 5 (lower is better)
Translates to: VAKGELNSRHKLLLY*LHCLHFLALGGQLT
Trigger: GGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCTCTCCTTTGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 90 bp TCTGGGGATGGCAAGTTGCCCTCATTCTCCCCAGAAACCTCACTTTaGGAGGCATCCTTTCTGAGATCAAAGGAAGAGCCTCCACCTCTT +
Preference number: 5 (lower is better)
Translates to: SGDGKLPSFSPETSL*EASFLRSKEEPPPL
Trigger: AAGAGGTGGAGGCTCTTCCTTTGATCTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGGGGAGAATGAGGGCAACTTGCCATCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGTGGCTTGGTGAGATGTaGGCGATCATGCAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGWLGEM*AIMQVL
Trigger: CAAAACCTGCATGATCGCCAACATCTCACCAAGCCA...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp GAGATGGACTATTCCATGAGGGGGCTGGGTAGTGAGGTGTCCCAGATAGGAGCCTTTTTGGGAGAACATTaGTCCTCTGACAAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: EMDYSMRGLGSEVSQIGAFLGEH*SSDKAP
Trigger: TGGGGCTTTGTCAGAGGACAAATGTTCTCCCAAAAA...GGCTCCTATCTGGGACACCTCACTACCCAGCCCCCTCATGGAATAGTCCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGTAAAAGAGGAAGAAGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTCGGCCTGGCCCACCCTaGGAGGCACTCCTGTGCATG +
Preference number: 5 (lower is better)
Translates to: SKRGRSPFTVSSRHLCIIRPGPP*EALLCM
Trigger: CATGCACAGGAGTGCCTCCAAGGGTGGGCCAGGCCG...AATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCTTCTTCCTCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp ATAGCGCAAGGTGTTGAGAGTGTGTTCAGTGGCCACGTGGCTTGGTaGGATGTTGGCGATCATGCAGGTTTTGGCATTGCCGATGAAAGA +
Preference number: 5 (lower is better)
Translates to: IAQGVESVFSGHVAW*DVGDHAGFGIADER
Trigger: TCTTTCATCGGCAATGCCAAAACCTGCATGATCGCCAACATCTCACCAAGCCACGTGGCCACTGAACACACTCTCAACACCTTGCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 90 bp GGAAGAGCCTCCACCTCTTTCCTGTCTATATATGAAATCTACCTGTaGACAGTATGGCTTCTCTGCCAGGCTGTCTCTGGGAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRASTSFLSIYEIYL*TVWLLCQAVSGRRP
Trigger: GGGCCTTCTCCCAGAGACAGCCTGGCAGAGAAGCCATACTGTTCACAGGTAGATTTCATATATAGACAGGAAAGAGGTGGAGGCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp TGCTTCCTGCTAAAAAGATACACAGCAGGCAGAACTTGGCTGAAGGTTTGTGTGCCAGTGCTGCGCTCCTaGCTGCCCTTTAAGATCACC +
Preference number: 5 (lower is better)
Translates to: CFLLKRYTAGRTWLKVCVPVLRS*LPFKIT
Trigger: GGTGATCTTAAAGGGCAGCAAGGAGCGCAGCACTGG...CACACAAACCTTCAGCCAAGTTCTGCCTGCTGTGTATCTTTTTAGCAGGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTCTGCACCTTCCATCTTaGTCTGTCTATCTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: LDQAASVSREPFNPLLGLLHLPS*SVYLSP
Trigger: GGGACTCAGATAGACAGACAAAGATGGAAGGTGCAG...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTGTGACATTTTCACTGTaGCAGGGCAACTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: LDQAASVSREPFNPLLGLVTFSL*QGNLMG
Trigger: CCCCATCAAGTTGCCCTGCAACAGTGAAAATGTCAC...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGGCCCTGTGGTGGGCGTaGCCAAAGGAGAGCTCAACT +
Preference number: 5 (lower is better)
Translates to: FSISELSSHFRPVLVFGLALWWA*PKESST
Trigger: AGTTGAGCTCTCCTTTGGCAACGCCCACCACAGGGC...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp TTGATGTGTGACACAGGCACCCTCTTCTGCCTCAACACTGGATTGCAGGAAGGGATCAAGTTCCTCTACTaGGGCTCCATCATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LMCDTGTLFCLNTGLQEGIKFLY*GSIMVF
Trigger: GAAAACCATGATGGAGCCCAAGTAGAGGAACTTGAT...CCCTTCCTGCAATCCAGTGTTGAGGCAGAAGAGGGTGCCTGTGTCACACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGCCCTTTTACTGTGAGCAGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGAGGGAGAACTTGGCCTaGCTAAGCACCTTGAGATCG +
Preference number: 5 (lower is better)
Translates to: SPFTVSSRHLCIICHKQRRENLA*LSTLRS
Trigger: CGATCTCAAGGTGCTTAGCAAGGCCAAGTTCTCCCT...CCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCTGCTCACAGTAAAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AAGGGAAAGGCATTAGGTTCTTCGGCCTGGCCCACCCTTGGAGGCACTCCTGTGAGTAAGTTTTTGTCCTaGACCTTAATACTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: KGKALGSSAWPTLGGTPVSKFLS*TLILCH
Trigger: ATGGCACAGTATTAAGGTCAAGGACAAAAACTTACT...CACAGGAGTGCCTCCAAGGGTGGGCCAGGCCGAAGAACCTAATGCCTTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTCACCTGCAGAATATATaGAGTGAGGTCAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: LDQAASVSREPFNPLLGLHLQNI*SEVNCF
Trigger: GAAGCAGTTGACCTCACTCAATATATTCTGCAGGTG...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp TTCTGTTTCAGAGGCCTCAGACTGTTGAACAGAGCACTCTGTTCAACTGCCAAGATGCAGGTTTTGGCATaGCCGATGAAAGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: FCFRGLRLLNRALCSTAKMQVLA*PMKESF
Trigger: GAAGGACTCTTTCATCGGCAATGCCAAAACCTGCAT...CTTGGCAGTTGAACAGAGTGCTCTGTTCAACAGTCTGAGGCCTCTGAAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp TTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACCTGTCCTCGTTTTTGGTTTGGGTGACTGTGTCTCTTaGGTCTGGGGATCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: FSISELSSHFRPVLVFGLGDCVS*VWGSRN
Trigger: GTTCCTGGATCCCCAGACCAAAGAGACACAGTCACC...CAAACCAAAAACGAGGACAGGTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CTCCATTTGACCCAGAGTGGCTTTAAAGTAATTGGCACCTGGAGGCTACTTTGTGAGATCGGCCTGGGTTaGAGCCATGTGACATTTTCA +
Preference number: 5 (lower is better)
Translates to: LHLTQSGFKVIGTWRLLCEIGLG*SHVTFS
Trigger: TGAAAATGTCACATGGCTCAAACCCAGGCCGATCTC...ACAAAGTAGCCTCCAGGTGCCAATTACTTTAAAGCCACTCTGGGTCAAATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp TCCACACAAAGAGGTGCTTTCTTGGCTGGGACACTTCTAGTTGCCTaGAGATATCTTTGGCAGCTAGAGCATACAATCCTGGGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: STQRGAFLAGTLLVA*RYLWQLEHTILGSH
Trigger: ATGAGAACCCAGGATTGTATGCTCTAGCTGCCAAAGATATCTTCAGGCAACTAGAAGTGTCCCAGCCAAGAAAGCACCTCTTTGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402558.7
CDS-3UTR CAA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATATCTTTGATCTGAATTaGGATGACGGCATGGGAGCG +
Preference number: 5 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNIFDLN*DDGMGA
Trigger: CGCTCCCATGCCGTCATCCAAATTCAGATCAAAGAT...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGCAGGCATTTATGCATCATTTGCCACAAGCAGAGGATGGGATTTAAACTGTTTTGGCAAGGCTGCCTCTaGATCACCAGATGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SRHLCIICHKQRMGFKLFWQGCL*ITRWHC
Trigger: ACAGTGCCATCTGGTGATCAAGAGGCAGCCTTGCCA...AAACAGTTTAAATCCCATCCTCTGCTTGTGGCAAATGATGCATAAATGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CTGGACCAGGCTGCTAGTGTCTCAAGAGAGCCATTTAACCCTCTTCTTGGCCTTAGACTCTGGATACACTaGGATTTCAGAACCATGATT +
Preference number: 5 (lower is better)
Translates to: LDQAASVSREPFNPLLGLRLWIH*DFRTMI
Trigger: AATCATGGTTCTGAAATCCAAGTGTATCCAGAGTCT...AAGGCCAAGAAGAGGGTTAAATGGCTCTCTTGAGACACTAGCAGCCTGGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp ATAAAAGAGATCCTGCCAAATGTCCTCTTGGCTGAATCTTTGATCTaGATTTGGATGACGGCATGGGAGCGGGAGGAGTCTGCATTAACT +
Preference number: 5 (lower is better)
Translates to: IKEILPNVLLAESLI*IWMTAWEREESALT
Trigger: AGTTAATGCAGACTCCTCCCGCTCCCATGCCGTCATCCAAATTCAGATCAAAGATTCAGCCAAGAGGACATTTGGCAGGATCTCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp TGTCCACCTGAAGCTCTTGCAGTCCCACTATCTGCACCATGTGCTTaGTATCTTCTCTTGCAAAGAGCCTTTTTCTTCTATTTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: CPPEALAVPLSAPCA*YLLLQRAFFFYLGG
Trigger: ACCTCCTAAATAGAAGAAAAAGGCTCTTTGCAAGAGAAGATAGCAAGCACATGGTGCAGATAGTGGGACTGCAAGAGCTTCAGGTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402558.7
CDS-3UTR CAA 90 bp GATAGAATAGGACCTAACCGTTTTCTATTTCGGAGCTTTCTTCCCACTTCAGACGAAGTAAAAGGAATGTaGGGTGGGTGGCTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: DRIGPNRFLFRSFLPTSDEVKGM*GGWLVR
Trigger: TCTGACCAGCCACCCACCCAACATTCCTTTTACTTC...GTCTGAAGTGGGAAGAAAGCTCCGAAATAGAAAACGGTTAGGTCCTATTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGAATTCAGCTGGTGAAGCCTCTGGTCTCAGCATGTTGTCTTCTCTGTCTTGTGCCAAGGACAGTTTTGTaGCCCATTCGATTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: RIQLVKPLVSACCLLCLVPRTVL*PIRFFS
Trigger: TGAGAAAAATCGAATGGGCAACAAAACTGTCCTTGG...CACAAGACAGAGAAGACAACATGCTGAGACCAGAGGCTTCACCAGCTGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp GAGTCTTCGCTATTCTCCAGGGTGTTCCTTTGCTTTGTGGCCCTCTaGCTAGAGATGTGTGAAAAAGAATCTTCACTGAAATCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ESSLFSRVFLCFVAL*LEMCEKESSLKSLS
Trigger: TGACAGTGATTTCAGTGAAGATTCTTTTTCACACATCTCTAGTCAGAGGGCCACAAAGCAAAGGAACACCCTGGAGAATAGCGAAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCTGCACTTTCTTGCACTaGGTGGACAGCTTACCACGC +
Preference number: 5 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFCTFLH*VDSLPR
Trigger: GCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCA...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCCTGTTGCAGGGCAACTaGATGGGGTCTGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFLLQGN*MGSVDK
Trigger: TTTGTCCACAGACCCCATCAAGTTGCCCTGCAACAG...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp CCCCCAGTATTGCAGAAAGGTAATTTGGTGAAAAGAGTGAAGTGCTaGTTTCTGTTTGCACATAGGAATCACCAGCTGTGGCATTCAGAA +
Preference number: 5 (lower is better)
Translates to: PPVLQKGNLVKRVKC*FLFAHRNHQLWHSE
Trigger: TTCTGAATGCCACAGCTGGTGATTCCTATGTGCAAACAGAAATCAGCACTTCACTCTTTTCACCAAATTACCTTTCTGCAATACTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTGTCTATCTGAGTCCCTaGCATCTGCTGCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYIVYLSP*HLLLFH
Trigger: GTGAAAGAGCAGCAGATGCAAGGGACTCAGATAGAC...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATGCATTTCTGTCTTTATaGTCAGCAGGAGAATCAAAA +
Preference number: 5 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNAFLSL*SAGESK
Trigger: TTTTGATTCTCCTGCTGACAATAAAGACAGAAATGC...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp AGTATCGGGCATTGTACAGAGGCCTTTCACCCGAGCAAAAGTCAGGAGAAAAATATTTCAAACCCATCATaGCTGGCATTTCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: SIGHCTEAFHPSKSQEKNISNPS*LAFLSL
Trigger: TAAAGACAGAAATGCCAGCAATGATGGGTTTGAAAT...ATTTTTCTCCTGACTTTTGCTCGGGTGAAAGGCCTCTGTACAATGCCCGATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGTTAGTTAGATCTTTCTaGTCACCTGTCCTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWLVRSF*SPVLGL
Trigger: TAGCCCCAGGACAGGTGACAAGAAAGATCTAACTAA...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCTCTGGTCTCAGCATGTaGTCTTCTCTGTCTTGTGAC +
Preference number: 5 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFSGLSM*SSLSCD
Trigger: GTCACAAGACAGAGAAGACAACATGCTGAGACCAGA...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp TATTTAGGAGGTCATAAAGCTGTCCACAGTAAATTTCATAGAAGCTaGTCCACACAAAGAGGTGCTTTCTTGGCTGGGACACTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: YLGGHKAVHSKFHRS*STQRGAFLAGTLLV
Trigger: AACTAGAAGTGTCCCAGCCAAGAAAGCACCTCTTTGTGTGGATCAGCTTCTATGAAATTTACTGTGGACAGCTTTATGACCTCCTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402558.7
CDS CCA 90 bp TTCCTGAGATTTGATGCGCAGGCTGCTTGTCTGAAGATGACGCTCTaGGATACTGACTGCTTTATCTTCTTCTTGCATAATCTTAATAAT +
Preference number: 5 (lower is better)
Translates to: FLRFDAQAACLKMTL*DTDCFIFFLHNLNN
Trigger: ATTATTAAGATTATGCAAGAAGAAGATAAAGCAGTCAGTATCCCAGAGCGTCATCTTCAGACAAGCAGCCTGCGCATCAAATCTCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS-3UTR CAA 90 bp CATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTTTCCACAATCCCCCAGTATaGCAGAAAGGTAATTTGGTG +
Preference number: 5 (lower is better)
Translates to: HLLLSVTHQVKVYAIYIFHNPPV*QKGNLV
Trigger: CACCAAATTACCTTTCTGCAATACTGGGGGATTGTG...GAAAATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp TCACATCTGCTGCTGTCAGTGACACATCAAGTCAAGGTTTATGCTATTTACATTAGCTCTGAATTCGTTTaGGAGAGGAGTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: SHLLLSVTHQVKVYAIYISSEFV*ERSFQM
Trigger: CATCTGGAAACTCCTCTCCAAAACGAATTCAGAGCT...AATGTAAATAGCATAAACCTTGACTTGATGTGTCACTGACAGCAGCAGATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS-3UTR CAA 90 bp GGTATGTCTTGGTGTGATAACTTCTTTATTACCAAGGCTGTTTTATGGGAGTGGAATAATTTTGATAAGTaGGAAGAGACGTTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: GMSWCDNFFITKAVLWEWNNFDK*EETFAV
Trigger: GACCGCAAACGTCTCTTCCAACTTATCAAAATTATT...CCACTCCCATAAAACAGCCTTGGTAATAAAGAAGTTATCACACCAAGACATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379174.7
CDS TCA 90 bp AGTGTTCTGTCTGATACAAGAATGAGGGATTCCATAGTTATACCCTaGAACATGAGAGATTCTTTGAATAATGGGAATATCACAATCCCC +
Preference number: 5 (lower is better)
Translates to: SVLSDTRMRDSIVIP*NMRDSLNNGNITIP
Trigger: GGGGATTGTGATATTCCCATTATTCAAAGAATCTCTCATGTTTCAGGGTATAACTATGGAATCCCTCATTCTTGTATCAGACAGAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 90 bp CATTTGCAGAGAAATCTGATAAACTGCACATTTCAAACCCATCATTaGTGGCATTTCTGTCTTTATTGTCAGCAGGAGAATCAAAATTCA +
Preference number: 5 (lower is better)
Translates to: HLQRNLINCTFQTHH*WHFCLYCQQENQNS
Trigger: TGAATTTTGATTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAATGTGCAGTTTATCAGATTTCTCTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp CTGTTCCCTCAGGGGCTGCGGTGGGCCCGTGGCAGGTaGGATAGAGCTGCAGCTGGCTCCTCAGACTCTGGA +
Preference number: 6 (lower is better)
Translates to: LFPQGLRWARGR*DRAAAGSSDSG
Trigger: TCCAGAGTCTGAGGAGCCAGCTGCAGCTCTATCTCACCTGCCACGGGCCCACCGCAGCCCCTGAGGGAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp CTCTGCTCTGGCAGGCCTCTCCTAGGTCTGCCTCCCTaGTGGGCAGCTTGTCAGCTGGGTGCTGACGGATGG +
Preference number: 6 (lower is better)
Translates to: LCSGRPLLGLPP*WAACQLGADGW
Trigger: CCATCCGTCAGCACCCAGCTGACAAGCTGCCCAGCAGGGAGGCAGACCTAGGAGAGGCCTGCCAGAGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GGTCTGGCTCTAAGACGGCACTGTTCCCTCAGGGGCTaGGGTGGGCCCGTGGCAGGTGAGATAGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GLALRRHCSLRG*GGPVAGEIELQ
Trigger: CTGCAGCTCTATCTCACCTGCCACGGGCCCACCGCAGCCCCTGAGGGAACAGTGCCGTCTTAGAGCCAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp TGCTCTGGCAGGCCTCTCCTAGGTCTGCCTCCCTGCTaGGCAGCTTGTCAGCTGGGTGCTGACGGATGGGTG +
Preference number: 6 (lower is better)
Translates to: CSGRPLLGLPPC*AACQLGADGWV
Trigger: CACCCATCCGTCAGCACCCAGCTGACAAGCTGCCCAGCAGGGAGGCAGACCTAGGAGAGGCCTGCCAGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp GAGGCAGGCCTAGCAGGCGTGCCCCTCTGGCTGTCTTaGCTGTACTCAGCCCTGTGGTGGGCGTTGCCAAAG +
Preference number: 6 (lower is better)
Translates to: EAGLAGVPLWLS*LYSALWWALPK
Trigger: CTTTGGCAACGCCCACCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGCACGCCTGCTAGGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp CCAAGCTTCAGAGGCAGGCCTAGCAGGCGTGCCCCTCTGGCTGTCTaGACTGTACTCAGCCCTGTGGTGGGCGTTGCCAAAGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: PSFRGRPSRRAPLAV*TVLSPVVGVAKGEL
Trigger: GAGCTCTCCTTTGGCAACGCCCACCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGCACGCCTGCTAGGCCTGCCTCTGAAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GCCACTAGACTGTGCGTAGCCCCATCCTGGACCAGCTaGTCCGAGGGAGGAGACCCTTCGTTGTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: ATRLCVAPSWTS*SEGGDPSLSGF
Trigger: GAACCCAGACAACGAAGGGTCTCCTCCCTCGGAGCAGCTGGTCCAGGATGGGGCTACGCACAGTCTAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp AGAGGCAGGCCTAGCAGGCGTGCCCCTCTGGCTGTCTaGACTGTACTCAGCCCTGTGGTGGGCGTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: RGRPSRRAPLAV*TVLSPVVGVAK
Trigger: TTTGGCAACGCCCACCACAGGGCTGAGTACAGTCAAGACAGCCAGAGGGGCACGCCTGCTAGGCCTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TCCGGCCTCGGTCCAAACTCCTCGGTCTGCCCTGTCTaGGAAGAGGAGAAGACAATGCCGTCGGGAGTGAGC +
Preference number: 6 (lower is better)
Translates to: SGLGPNSSVCPV*EEEKTMPSGVS
Trigger: GCTCACTCCCGACGGCATTGTCTTCTCCTCTTCTCAGACAGGGCAGACCGAGGAGTTTGGACCGAGGCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684219.1
CDS GCA 72 bp GCCGAGCTCAGCCATTTCATCCAGCTGTTCCTGGTGTaGTCGGATGACCACCTGCTGCGCTTGCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: AELSHFIQLFLV*SDDHLLRLLQG
Trigger: ACCCTGGAGCAAGCGCAGCAGGTGGTCATCCGAGCACACCAGGAACAGCTGGATGAAATGGCTGAGCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp CTCCAGTCCACGGGCCCCTTACTTGGGCTGCAGCTGTaGTCGAGTGCTGCTCTTCTGTGGTTTATGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LQSTGPLLGLQL*SSAALLWFMGS
Trigger: GGACCCCATAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGGACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp CACGGGCCCCTTACTTGGGCTGCAGCTGTGATCGAGTaGTGCTCTTCTGTGGTTTATGGGGTCCCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: HGPLTWAAAVIE*CSSVVYGVPGV
Trigger: GACTCCAGGGACCCCATAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp GCTGACGGAGTGTCCCTGCAGTCTTGGGAGAGCAGCTaGGAACCAAGGGAGAACTTGGCCTTGCTAAGCACC +
Preference number: 6 (lower is better)
Translates to: ADGVSLQSWESS*EPRENLALLST
Trigger: GGTGCTTAGCAAGGCCAAGTTCTCCCTTGGTTCCCAGCTGCTCTCCCAAGACTGCAGGGACACTCCGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp TACCACGCACTAGGCCTTCTCCTGGGCCTGAGGCCCTaGTTTCCCACCCAAGGACAGTTTTGTTGCCCATTC +
Preference number: 6 (lower is better)
Translates to: YHALGLLLGLRP*FPTQGQFCCPF
Trigger: GAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAGGCCCAGGAGAAGGCCTAGTGCGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GCCACCTGCTTCTCAGGACCCTGTCCCCACGTCTGGTaGAGGAAGAATGAGTCTTCGCTATTCTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ATCFSGPCPHVW*RKNESSLFSRV
Trigger: CACCCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GGGCTAGAAAACAGACTCTGCTGTCTTTCTGCCACCTaGTTCTCAGGACCCTGTCCCCACGTCTGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLENRLCCLSAT*FSGPCPHVWCR
Trigger: CCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTGGCAGAAAGACAGCAGAGTCTGTTTTCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp GTAAAAGGAATGTTGGGTGGGTGGCTGGTCAGAGGATaGACCTTCCCTCTCGTGGAACCAGGGGCTGCCACT +
Preference number: 6 (lower is better)
Translates to: VKGMLGGWLVRG*TFPLVEPGAAT
Trigger: AGTGGCAGCCCCTGGTTCCACGAGAGGGAAGGTCCATCCTCTGACCAGCCACCCACCCAACATTCCTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp TTGAAGCCGAGCTCAGCCATTTCATCCAGCTGTTCCTaGTGTGCTCGGATGACCACCTGCTGCGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: LKPSSAISSSCS*CARMTTCCACS
Trigger: GGAGCAAGCGCAGCAGGTGGTCATCCGAGCACACCAGGAACAGCTGGATGAAATGGCTGAGCTCGGCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp CAGAGTAAGAGTGGAACAGAGGCGGAGTCTCATTCGTaGGCTGACCCTCTGGGGGCCTGTACTGGCGTAAAG +
Preference number: 6 (lower is better)
Translates to: QSKSGTEAESHS*ADPLGACTGVK
Trigger: CTTTACGCCAGTACAGGCCCCCAGAGGGTCAGCTCACGAATGAGACTCCGCCTCTGTTCCACTCTTACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp TCTCTCTGCTCCAGTCCACGGGCCCCTTACTTGGGCTaGAGCTGTGATCGAGTGCTGCTCTTCTGTGGTTTA +
Preference number: 6 (lower is better)
Translates to: SLCSSPRAPYLG*SCDRVLLFCGL
Trigger: TAAACCACAGAAGAGCAGCACTCGATCACAGCTGCAGCCCAAGTAAGGGGCCCGTGGACTGGAGCAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp TACCCATGTGTTCGTGGGAGAAAAGTACAGTCTCTCTaGTCTGGCAGGCCTCTCCTAGGTCTGCCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: YPCVRGRKVQSL*SGRPLLGLPPC
Trigger: GCAGGGAGGCAGACCTAGGAGAGGCCTGCCAGAGCAGAGAGACTGTACTTTTCTCCCACGAACACATGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp TGGGAAACCCCAGGAGCCATCCAGCCCCGTCTCCTCTaGATCAGCATCATACTGCTCACTACCCATGTGTTC +
Preference number: 6 (lower is better)
Translates to: WETPGAIQPRLL*ISIILLTTHVF
Trigger: GAACACATGGGTAGTGAGCAGTATGATGCTGATGCAGAGGAGACGGGGCTGGATGGCTCCTGGGGTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp TCTGCCACCTGCTTCTCAGGACCCTGTCCCCACGTCTaGTGCAGGAAGAATGAGTCTTCGCTATTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SATCFSGPCPHV*CRKNESSLFSR
Trigger: CCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAGAAGCAGGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp CAGTCTTGGGAGAGCAGCTGGGAACCAAGGGAGAACTaGGCCTTGCTAAGCACCTTGAGATCGGCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: QSWESSWEPREN*ALLSTLRSAWV
Trigger: AACCCAGGCCGATCTCAAGGTGCTTAGCAAGGCCAAGTTCTCCCTTGGTTCCCAGCTGCTCTCCCAAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp CGAGACACAAGCTGCTTCTGTACTGGCTGCACTGTCTGCACTTTCTaGCACTTGGTGGACAGCTTACCACGCACTAGGCCTTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RDTSCFCTGCTVCTF*HLVDSLPRTRPSPG
Trigger: CCCAGGAGAAGGCCTAGTGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TGCCTAGTTGCTGAAGACACTGGCAAGGCTGCCTCTTaGTCACCAGATGGCACTGTGTGGCTCACAACTGGG +
Preference number: 6 (lower is better)
Translates to: CLVAEDTGKAAS*SPDGTVWLTTG
Trigger: CCCAGTTGTGAGCCACACAGTGCCATCTGGTGATCAAGAGGCAGCCTTGCCAGTGTCTTCAGCAACTAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GGCTTATTATCAGGGGGAGATGAGGACAGCCACAGGTaGCTAGTTGCTGAAGACACTGGCAAGGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GLLSGGDEDSHR*LVAEDTGKAAS
Trigger: AGAGGCAGCCTTGCCAGTGTCTTCAGCAACTAGGCACCTGTGGCTGTCCTCATCTCCCCCTGATAATAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp AGCCTTGTAGGATGTTTTCTCTCCTGGGCCCAGAGCTaGTCAGCCACATCACTACTTCCTGTTCGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: SLVGCFLSWAQS*SATSLLPVRGV
Trigger: CACCCCACGAACAGGAAGTAGTGATGTGGCTGACCAGCTCTGGGCCCAGGAGAGAAAACATCCTACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp GGTGTTGAGAGTGTGTTCAGTGGCCACGTGGCTTGGTaGGATGTTGGCGATCATGCAGGTTTTGGCATTGCC +
Preference number: 6 (lower is better)
Translates to: GVESVFSGHVAW*DVGDHAGFGIA
Trigger: GGCAATGCCAAAACCTGCATGATCGCCAACATCTCACCAAGCCACGTGGCCACTGAACACACTCTCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TGTCCAGAGCGCACAGTTCCTTTCACAGGGCTAGCATaGATGACCCACTCTTGTGAAGGACTCCCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: CPERTVPFTGLA*MTHSCEGLPLE
Trigger: CTCCAGAGGGAGTCCTTCACAAGAGTGGGTCATTCATGCTAGCCCTGTGAAAGGAACTGTGCGCTCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp CTCAGGACCCTGTCCCCACGTCTGGTGCAGGAAGAATaGGTCTTCGCTATTCTCCAGGGTGTTCCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: LRTLSPRLVQEE*VFAILQGVPLL
Trigger: AAGCAAAGGAACACCCTGGAGAATAGCGAAGACTCATTCTTCCTGCACCAGACGTGGGGACAGGGTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp CGAGACACAAGCTGCTTCTGTACTGGCTGCACTGTCTaGACTTTCTTGCACTTGGTGGACAGCTTACCACGC +
Preference number: 6 (lower is better)
Translates to: RDTSCFCTGCTV*TFLHLVDSLPR
Trigger: GCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp GTTTTTCACAGTGCTGGTCACCTGGATTGGGCCGTCTaGACTGACTTCTCTCAGAGGTGTGGTGACTGTGTC +
Preference number: 6 (lower is better)
Translates to: VFHSAGHLDWAV*TDFSQRCGDCV
Trigger: GACACAGTCACCACACCTCTGAGAGAAGTCAGTGCAGACGGCCCAATCCAGGTGACCAGCACTGTGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp AGCTGCTTCTGTACTGGCTGCACTGTCTGCACTTTCTaGCACTTGGTGGACAGCTTACCACGCACTAGGCCT +
Preference number: 6 (lower is better)
Translates to: SCFCTGCTVCTF*HLVDSLPRTRP
Trigger: AGGCCTAGTGCGTGGTAAGCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp CCTTCTCCTGGGCCTGAGGCCCTGCTTTCCCACCCAAGGACAGTTTaGTTGCCCATTCGATTTTTCTCAGAGCACAATGGTGCTGACTCT +
Preference number: 6 (lower is better)
Translates to: PSPGPEALLSHPRTV*LPIRFFSEHNGADS
Trigger: AGAGTCAGCACCATTGTGCTCTGAGAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAGGCCCAGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp CTCTGGGGATGGCAAGTTGCCCTCATTCTCCCCAGAAACCTCACTTaGGGAGGCATCCTTTCTGAGATCAAAGGAAGAGCCTCCACCTCT +
Preference number: 6 (lower is better)
Translates to: LWGWQVALILPRNLT*GGILSEIKGRASTS
Trigger: AGAGGTGGAGGCTCTTCCTTTGATCTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGGGGAGAATGAGGGCAACTTGCCATCCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TCCTTTCACAGGGCTAGCATGAATGACCCACTCTTGTaGAGGACTCCCTCTGGAGCCACCCCTTTTACCAGA +
Preference number: 6 (lower is better)
Translates to: SFHRASMNDPLL*RTPSGATPFTR
Trigger: TCTGGTAAAAGGGGTGGCTCCAGAGGGAGTCCTTCACAAGAGTGGGTCATTCATGCTAGCCCTGTGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp AGCTCAACTCGAGACACAAGCTGCTTCTGTACTGGCTaGACTGTCTGCACTTTCTTGCACTTGGTGGACAGC +
Preference number: 6 (lower is better)
Translates to: SSTRDTSCFCTG*TVCTFLHLVDS
Trigger: GCTGTCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp CCATCCAGCCCCGTCTCCTCTGCATCAGCATCATACTaGTCACTACCCATGTGTTCGTGGGAGAAAAGTACA +
Preference number: 6 (lower is better)
Translates to: PSSPVSSASASY*SLPMCSWEKST
Trigger: TGTACTTTTCTCCCACGAACACATGGGTAGTGAGCAGTATGATGCTGATGCAGAGGAGACGGGGCTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp GGAGAGCTCAACTCGAGACACAAGCTGCTTCTGTACTaGCTGCACTGTCTGCACTTTCTTGCACTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: GELNSRHKLLLY*LHCLHFLALGG
Trigger: TCCACCAAGTGCAAGAAAGTGCAGACAGTGCAGCCAGTACAGAAGCAGCTTGTGTCTCGAGTTGAGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp ATAGAAACGCAGATGTTCCTCCCTCTCCTTCTGATGTaGCGGGATGTTTGTCCAAGCTTCAGAGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: IETQMFLPLLLM*RDVCPSFRGRP
Trigger: AGGCCTGCCTCTGAAGCTTGGACAAACATCCCGCCACATCAGAAGGAGAGGGAGGAACATCTGCGTTTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp CTGACTTCTCTCAGAGGTGTGGTGACTGTGTCTCTTTaGTCTGGGGATCCAGGAACTGCAACGTGGGACAAT +
Preference number: 6 (lower is better)
Translates to: LTSLRGVVTVSL*SGDPGTATWDN
Trigger: ATTGTCCCACGTTGCAGTTCCTGGATCCCCAGACCAAAGAGACACAGTCACCACACCTCTGAGAGAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp GCATCAGCATCATACTGCTCACTACCCATGTGTTCGTaGGAGAAAAGTACAGTCTCTCTGCTCTGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: ASASYCSLPMCS*EKSTVSLLWQA
Trigger: GGCCTGCCAGAGCAGAGAGACTGTACTTTTCTCCCACGAACACATGGGTAGTGAGCAGTATGATGCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp CTACTTCCTGTTCGTGGGGTGAGTGTAGGTCCAGAATaGGGTACCCCCATATGTATGGTGGTGAAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: LLPVRGVSVGPE*GTPICMVVKGF
Trigger: AAAGCCCTTCACCACCATACATATGGGGGTACCCCATTCTGGACCTACACTCACCCCACGAACAGGAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp CCTCTGACAAAGCCCCAGGGGAGCTCTGAATTCGTTTaGGAGAGGAGTTTCCAGATGTCCGATTTCGACTGG +
Preference number: 6 (lower is better)
Translates to: PLTKPQGSSEFV*ERSFQMSDFDW
Trigger: CCAGTCGAAATCGGACATCTGGAAACTCCTCTCCAAAACGAATTCAGAGCTCCCCTGGGGCTTTGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp GGGCCTGAGGCCCTGCTTTCCCACCCAAGGACAGTTTaGTTGCCCATTCGATTTTTCTCAGAGCACAATGGT +
Preference number: 6 (lower is better)
Translates to: GPEALLSHPRTV*LPIRFFSEHNG
Trigger: ACCATTGTGCTCTGAGAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp ACTGACTTCTCTCAGAGGTGTGGTGACTGTGTCTCTTaGGTCTGGGGATCCAGGAACTGCAACGTGGGACAA +
Preference number: 6 (lower is better)
Translates to: TDFSQRCGDCVS*VWGSRNCNVGQ
Trigger: TTGTCCCACGTTGCAGTTCCTGGATCCCCAGACCAAAGAGACACAGTCACCACACCTCTGAGAGAAGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp CTTGGCCTTGCTAAGCACCTTGAGATCGGCCTGGGTTaGAGCCATGTGACATTTTCACTGTTGCAGGGCAAC +
Preference number: 6 (lower is better)
Translates to: LGLAKHLEIGLG*SHVTFSLLQGN
Trigger: GTTGCCCTGCAACAGTGAAAATGTCACATGGCTCAAACCCAGGCCGATCTCAAGGTGCTTAGCAAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp GGCCTGGGTTTGAGCCATGTGACATTTTCACTGTTGCAGGGCAACTaGATGGGGTCTGTGGACAAACCAAACTCCTGCCAACCAAGCCTT +
Preference number: 6 (lower is better)
Translates to: GLGLSHVTFSLLQGN*MGSVDKPNSCQPSL
Trigger: AAGGCTTGGTTGGCAGGAGTTTGGTTTGTCCACAGACCCCATCAAGTTGCCCTGCAACAGTGAAAATGTCACATGGCTCAAACCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp AAGGGAGAACTTGGCCTTGCTAAGCACCTTGAGATCGGCCTGGGTTaGAGCCATGTGACATTTTCACTGTTGCAGGGCAACTTGATGGGG +
Preference number: 6 (lower is better)
Translates to: KGELGLAKHLEIGLG*SHVTFSLLQGNLMG
Trigger: CCCCATCAAGTTGCCCTGCAACAGTGAAAATGTCACATGGCTCAAACCCAGGCCGATCTCAAGGTGCTTAGCAAGGCCAAGTTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp AAGGTGTTGAGAGTGTGTTCAGTGGCCACGTGGCTTGGTGAGATGTaGGCGATCATGCAGGTTTTGGCATTGCCGATGAAAGAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: KVLRVCSVATWLGEM*AIMQVLALPMKESF
Trigger: GAAGGACTCTTTCATCGGCAATGCCAAAACCTGCATGATCGCCAACATCTCACCAAGCCACGTGGCCACTGAACACACTCTCAACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TTGGTCTGGGGATCCAGGAACTGCAACGTGGGACAATaGGATAGTGAAACCATCTTCCTCTGGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: LVWGSRNCNVGQ*DSETIFLWGWQ
Trigger: TTGCCATCCCCAGAGGAAGATGGTTTCACTATCTCATTGTCCCACGTTGCAGTTCCTGGATCCCCAGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS GCA 72 bp CTGAGGCCCTGCTTTCCCACCCAAGGACAGTTTTGTTaGCCATTCGATTTTTCTCAGAGCACAATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRPCFPTQGQFC*PFDFSQSTMVL
Trigger: CAGCACCATTGTGCTCTGAGAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CCA 72 bp GGCAAGTTGCCCTCATTCTCCCCAGAAACCTCACTTTaGGAGGCATCCTTTCTGAGATCAAAGGAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: GKLPSFSPETSL*EASFLRSKEEP
Trigger: AGGCTCTTCCTTTGATCTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGGGGAGAATGAGGGCAACTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp CCTGAGGCCCTGCTTTCCCACCCAAGGACAGTTTTGTaGCCCATTCGATTTTTCTCAGAGCACAATGGTGCT +
Preference number: 6 (lower is better)
Translates to: PEALLSHPRTVL*PIRFFSEHNGA
Trigger: AGCACCATTGTGCTCTGAGAAAAATCGAATGGGCAACAAAACTGTCCTTGGGTGGGAAAGCAGGGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp TGGCAAGTTGCCCTCATTCTCCCCAGAAACCTCACTTaGGGAGGCATCCTTTCTGAGATCAAAGGAAGAGCC +
Preference number: 6 (lower is better)
Translates to: WQVALILPRNLT*GGILSEIKGRA
Trigger: GGCTCTTCCTTTGATCTCAGAAAGGATGCCTCCCAAAGTGAGGTTTCTGGGGAGAATGAGGGCAACTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp ATCCTGCCAAATGTCCTCTTGGCTGAATCTTTGATCTaGATTTGGATGACGGCATGGGAGCGGGAGGAGTCT +
Preference number: 6 (lower is better)
Translates to: ILPNVLLAESLI*IWMTAWEREES
Trigger: AGACTCCTCCCGCTCCCATGCCGTCATCCAAATTCAGATCAAAGATTCAGCCAAGAGGACATTTGGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp TTGAGCCATGTGACATTTTCACTGTTGCAGGGCAACTaGATGGGGTCTGTGGACAAACCAAACTCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: LSHVTFSLLQGN*MGSVDKPNSCQ
Trigger: TTGGCAGGAGTTTGGTTTGTCCACAGACCCCATCAAGTTGCCCTGCAACAGTGAAAATGTCACATGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TCCACCTCTTTCCTGTCTATATATGAAATCTACCTGTaGACAGTATGGCTTCTCTGCCAGGCTGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: STSFLSIYEIYL*TVWLLCQAVSG
Trigger: CCCAGAGACAGCCTGGCAGAGAAGCCATACTGTTCACAGGTAGATTTCATATATAGACAGGAAAGAGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp AGAGGTGCTTTCTTGGCTGGGACACTTCTAGTTGCCTaGAGATATCTTTGGCAGCTAGAGCATACAATCCTG +
Preference number: 6 (lower is better)
Translates to: RGAFLAGTLLVA*RYLWQLEHTIL
Trigger: CAGGATTGTATGCTCTAGCTGCCAAAGATATCTTCAGGCAACTAGAAGTGTCCCAGCCAAGAAAGCACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402558.7
CDS TCA 72 bp AGATGTTGGCGATCATGCAGGTTTTGGCATTGCCGATaGAAGAGTCCTTCAGGACCTGAGTTAGTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: RCWRSCRFWHCR*KSPSGPELVCF
Trigger: AAAGCAAACTAACTCAGGTCCTGAAGGACTCTTTCATCGGCAATGCCAAAACCTGCATGATCGCCAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp GGTCATAAAGCTGTCCACAGTAAATTTCATAGAAGCTaGTCCACACAAAGAGGTGCTTTCTTGGCTGGGACA +
Preference number: 6 (lower is better)
Translates to: GHKAVHSKFHRS*STQRGAFLAGT
Trigger: TGTCCCAGCCAAGAAAGCACCTCTTTGTGTGGATCAGCTTCTATGAAATTTACTGTGGACAGCTTTATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402558.7
CDS CCA 72 bp TTTGATGCGCAGGCTGCTTGTCTGAAGATGACGCTCTaGGATACTGACTGCTTTATCTTCTTCTTGCATAAT +
Preference number: 6 (lower is better)
Translates to: FDAQAACLKMTL*DTDCFIFFLHN
Trigger: ATTATGCAAGAAGAAGATAAAGCAGTCAGTATCCCAGAGCGTCATCTTCAGACAAGCAGCCTGCGCATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp AAACTGCACATTTCAAACCCATCATTGCTGGCATTTCTGTCTTTATaGTCAGCAGGAGAATCAAAATTCAGCTGTCTGCGAGGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: KLHISNPSLLAFLSL*SAGESKFSCLRGPD
Trigger: ATCTGGCCCTCGCAGACAGCTGAATTTTGATTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAATGTGCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp CTATTCTCCAGGGTGTTCCTTTGCTTTGTGGCCCTCTaGCTAGAGATGTGTGAAAAAGAATCTTCACTGAAA +
Preference number: 6 (lower is better)
Translates to: LFSRVFLCFVAL*LEMCEKESSLK
Trigger: TTTCAGTGAAGATTCTTTTTCACACATCTCTAGTCAGAGGGCCACAAAGCAAAGGAACACCCTGGAGAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp TTTGCACATAGGAATCACCAGCTGTGGCATTCAGAATTCCTGTTTTaGTATGGTACTGGGAATCATCTGGTAGCATGTGTTCTAGCACTT +
Preference number: 6 (lower is better)
Translates to: FAHRNHQLWHSEFLF*YGTGNHLVACVLAL
Trigger: AAGTGCTAGAACACATGCTACCAGATGATTCCCAGTACCATACAAAAACAGGAATTCTGAATGCCACAGCTGGTGATTCCTATGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp TTGCAGAAAGGTAATTTGGTGAAAAGAGTGAAGTGCTaGTTTCTGTTTGCACATAGGAATCACCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LQKGNLVKRVKC*FLFAHRNHQLW
Trigger: CCACAGCTGGTGATTCCTATGTGCAAACAGAAATCAGCACTTCACTCTTTTCACCAAATTACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS TCA 72 bp GATTTTCTCCATCTCAGTCCAAGGATTCTGTTTCTCTaGAGTGTTCTGTCTGATACAAGAATGAGGGATTCC +
Preference number: 6 (lower is better)
Translates to: DFLHLSPRILFL*SVLSDTRMRDS
Trigger: GGAATCCCTCATTCTTGTATCAGACAGAACACTTCAGAGAAACAGAATCCTTGGACTGAGATGGAGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp ATTTCAAACCCATCATTGCTGGCATTTCTGTCTTTATaGTCAGCAGGAGAATCAAAATTCAGCTGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: ISNPSLLAFLSL*SAGESKFSCLR
Trigger: TCGCAGACAGCTGAATTTTGATTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp GTAGCATGTGTTCTAGCACTTTTAGGTAAGTGGACTTCTGTTCATTaGCAGAGAAATCTGATAAACTGCACATTTCAAACCCATCATTGC +
Preference number: 6 (lower is better)
Translates to: VACVLALLGKWTSVH*QRNLINCTFQTHHC
Trigger: GCAATGATGGGTTTGAAATGTGCAGTTTATCAGATTTCTCTGCAAATGAACAGAAGTCCACTTACCTAAAAGTGCTAGAACACATGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp GAGAAATCTGATAAACTGCACATTTCAAACCCATCATaGCTGGCATTTCTGTCTTTATTGTCAGCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: EKSDKLHISNPS*LAFLSLLSAGE
Trigger: TTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAATGTGCAGTTTATCAGATTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp GGGATACTGACTGCTTTATCTTCTTCTTGCATAATCTTAATAATTTaGATAAGTTGGAAGAGACGTTTGCGGTCGTTCATGTCATGGACT +
Preference number: 6 (lower is better)
Translates to: GILTALSSSCIILII*ISWKRRLRSFMSWT
Trigger: AGTCCATGACATGAACGACCGCAAACGTCTCTTCCAACTTATCAAAATTATTAAGATTATGCAAGAAGAAGATAAAGCAGTCAGTATCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379174.7
ENST00000402558.7
ENST00000684219.1
CDS CCA 72 bp AATCTGATAAACTGCACATTTCAAACCCATCATTGCTaGCATTTCTGTCTTTATTGTCAGCAGGAGAATCAA +
Preference number: 6 (lower is better)
Translates to: NLINCTFQTHHC*HFCLYCQQENQ
Trigger: TTGATTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAATGTGCAGTTTATCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 90 bp TCATTTGCAGAGAAATCTGATAAACTGCACATTTCAAACCCATCATaGCTGGCATTTCTGTCTTTATTGTCAGCAGGAGAATCAAAATTC +
Preference number: 6 (lower is better)
Translates to: SFAEKSDKLHISNPS*LAFLSLLSAGESKF
Trigger: GAATTTTGATTCTCCTGCTGACAATAAAGACAGAAATGCCAGCAATGATGGGTTTGAAATGTGCAGTTTATCAGATTTCTCTGCAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7
CDS CAA 72 bp ATAATCTTAATAATTTTGATAAGTTGGAAGAGACGTTaGCGGTCGTTCATGTCATGGACTCCTAATTTGGAG +
Preference number: 6 (lower is better)
Translates to: IILIILISWKRR*RSFMSWTPNLE
Trigger: CTCCAAATTAGGAGTCCATGACATGAACGACCGCAAACGTCTCTTCCAACTTATCAAAATTATTAAGATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379174.7
ENST00000402558.7
ENST00000684219.1
CDS TCA 72 bp TCTGATACAAGAATGAGGGATTCCATAGTTATACCCTaGAACATGAGAGATTCTTTGAATAATGGGAATATC +
Preference number: 6 (lower is better)
Translates to: SDTRMRDSIVIP*NMRDSLNNGNI
Trigger: GATATTCCCATTATTCAAAGAATCTCTCATGTTTCAGGGTATAACTATGGAATCCCTCATTCTTGTATCAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379174.7
ENST00000402558.7