RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF21B (Homo sapiens)

Ensembl gene IDs: ENSG00000116852

Ensembl transcript IDs: ENST00000332129.6, ENST00000360529.9, ENST00000422435.2, ENST00000461742.7, ENST00000534043.1

Found 1663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGTGGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTaGCAGGCCCCGGAACGGAGGAAGGCACTGAGCGTCAGGCGGCCT +
Preference number: 1 (lower is better)
Translates to: MWCRGHGWCKAARHG*QAPERRKALSVRRP
Trigger: AGGCCGCCTGACGCTCAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACCACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp CCCGGGGGCGCTGGGCACAAGACCTCGCGAGTGAGAAGACACATGTaGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGC +
Preference number: 1 (lower is better)
Translates to: PGGAGHKTSRVRRHM*CRGHGWCKAARHGC
Trigger: GCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGTGCCCAGCGCCCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 90 bp AGCGCCCCCGCCTTCCCGGGGGCGCTGGGCACAAGACCTCGCGAGTaGGAAGACACATGTGGTGCCGCGGGCATGGCTGGTGTAAGGCTG +
Preference number: 1 (lower is better)
Translates to: SAPAFPGALGTRPRE*EDTCGAAGMAGVRL
Trigger: CAGCCTTACACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGTGCCCAGCGCCCCCGGGAAGGCGGGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp AAGACCTCGCGAGTGAGAAGACACATGTGGTGCCGCGGGCATGGCTaGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGG +
Preference number: 1 (lower is better)
Translates to: KTSRVRRHMWCRGHG*CKAARHGCQAPERR
Trigger: CCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCGCGAGGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 90 bp GGCTGCTGCACCTCCCCACAGGGCTCCACCACTGGGCCAAAGGCCTaGGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACG +
Preference number: 1 (lower is better)
Translates to: GCCTSPQGSTTGPKA*ERGRAGSAGDNVAT
Trigger: CGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGGCCTTTGGCCCAGTGGTGGAGCCCTGTGGGGAGGTGCAGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR CCA 90 bp TCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAGCCAACGTaGGGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGG +
Preference number: 1 (lower is better)
Translates to: SQTQAPPISLWTEPT*GDPPGPGPVKSACG
Trigger: CCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCCCCACGTTGGCTCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTaGAGGAGGGACAGGCAGGGCACCTCTCTAGGCCAGGCAGGACAG +
Preference number: 1 (lower is better)
Translates to: SWGLSHCSCLEKDGG*RRDRQGTSLGQAGQ
Trigger: CTGTCCTGCCTGGCCTAGAGAGGTGCCCTGCCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
3UTR GCA 90 bp TTCTGCTCCCTGGCACCCATCTCCTGGGGCCTGTCCCACTGTTCATaGTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCAGGGCACC +
Preference number: 1 (lower is better)
Translates to: FCSLAPISWGLSHCS*LEKDGGCRRDRQGT
Trigger: GGTGCCCTGCCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAGGGAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
3UTR CCA 90 bp TCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTaGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: SRPEGSPFCSLAPIS*GLSHCSCLEKDGGC
Trigger: GCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
3UTR TCA 90 bp CCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTaGCCACCTCAAAGGCTTGGGTGTGCCAGGCTCCGCCTGTTAATC +
Preference number: 1 (lower is better)
Translates to: PDPPLSLPKGLKVAL*PPQRLGCARLRLLI
Trigger: GATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp ACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTaGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCTTGGCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: TLQNFTVRSLGWRTK*RGAGQLLQWAWLAA
Trigger: GGCAGCCAGCCAAGCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR CCA 90 bp GGTAACCGCCGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTaGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCT +
Preference number: 1 (lower is better)
Translates to: GNRRTLQNFTVRSLG*RTKWRGAGQLLQWA
Trigger: AGCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCGGCGGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR GCA 90 bp GCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAGG +
Preference number: 1 (lower is better)
Translates to: ASWGYLRVARGLRVS*KAQPPTPGFLSYLR
Trigger: CCTCAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp TGTGGGGTAACCGCCGGACACTCCAGAACTTCACCGTCAGGTCACTaGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGT +
Preference number: 1 (lower is better)
Translates to: CGVTAGHSRTSPSGH*GGGQSGGVPVSSCS
Trigger: ACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCGGCGGTTACCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR TCA 90 bp CTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCCCAGACTaGAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGT +
Preference number: 1 (lower is better)
Translates to: LRPLKGGGAGSWLPD*SGKHKTSDATEKQG
Trigger: ACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp TCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTaGCCCAGACTTCAATACCACATCCAGCAGGGCCAGCACCAGCAG +
Preference number: 1 (lower is better)
Translates to: SQETSIQGGLLPAIS*PRLQYHIQQGQHQQ
Trigger: CTGCTGGTGCTGGCCCTGCTGGATGTGGTATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 90 bp GGAGGACAGCAGGAGCCTAATGAAGCCTGCAGCCTGGGCAGGACATaGTTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCTGATTCA +
Preference number: 1 (lower is better)
Translates to: GGQQEPNEACSLGRT*LLEKSWWAGQGPDS
Trigger: TGAATCAGGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTGCAGGCTTCATTAGGCTCCTGCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTaGTATCAGCTGCCCCAGACTTCAATACCACATCCAGCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: TVQVPGDQHPRGSPS*YQLPQTSIPHPAGP
Trigger: TGGCCCTGCTGGATGTGGTATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp GGACACATACCACAGGTCCGGGACACACAGTGGGAAGAAAGTCACTaGTCCTGCAGGGCAGGCTCTGCCCACACAAACACGATGGTGAAC +
Preference number: 1 (lower is better)
Translates to: GHIPQVRDTQWEESH*SCRAGSAHTNTMVN
Trigger: GTTCACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCACTGTGTGTCCCGGACCTGTGGTATGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp GCCCAAGACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTaGAAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCT +
Preference number: 1 (lower is better)
Translates to: AQDGEEPRAETQNHL*KVQKSLRPLKGGGA
Trigger: AGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp AGATTTGGGGTGCGGGGTTTAGAGAGCGCTTTACTCCTGGTCCCATaGCGTAAAGATGTGGCTGGGCCTGACAAGGCTCAGCCTCCAGTC +
Preference number: 1 (lower is better)
Translates to: RFGVRGLESALLLVP*RKDVAGPDKAQPPV
Trigger: GACTGGAGGCTGAGCCTTGTCAGGCCCAGCCACATCTTTACGCCATGGGACCAGGAGTAAAGCGCTCTCTAAACCCCGCACCCCAAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp CCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTaGGTGTGCCAGGCTCCGCCTGTTAATCTTTCCTCCTTCCTTGGA +
Preference number: 1 (lower is better)
Translates to: PSQGAEGGTLTTSKA*VCQAPPVNLSSFLG
Trigger: TCCAAGGAAGGAGGAAAGATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp GGACACACAGTGGGAAGAAAGTCACTGCTCCTGCAGGGCAGGCTCTaGCCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAA +
Preference number: 1 (lower is better)
Translates to: GHTVGRKSLLLQGRL*PHKHDGEQTRHRQQ
Trigger: TTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCACTGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp ATACCACAGGTCCGGGACACACAGTGGGAAGAAAGTCACTGCTCCTaGAGGGCAGGCTCTGCCCACACAAACACGATGGTGAACAGACCA +
Preference number: 1 (lower is better)
Translates to: IPQVRDTQWEESHCS*RAGSAHTNTMVNRP
Trigger: TGGTCTGTTCACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCACTGTGTGTCCCGGACCTGTGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp CAAAGGCCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTaGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTT +
Preference number: 1 (lower is better)
Translates to: QRPEKGAEPVQQETM*PRLPGGEQEGIMPF
Trigger: AAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR CCA 90 bp CTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTTTAGAGATTTaGGGTGCGGGGTTTAGAGAGCGCTTTACTCCTGGTCCCATGGCG +
Preference number: 1 (lower is better)
Translates to: LTRARTQPELRRLEI*GAGFRERFTPGPMA
Trigger: CGCCATGGGACCAGGAGTAAAGCGCTCTCTAAACCCCGCACCCCAAATCTCTAAACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp GGCTATGCCAAGCAAGGAGAGCAGCAAGCAGTTGCCTGTTTGGGATaGCAAAGGGACACATACCACAGGTCCGGGACACACAGTGGGAAG +
Preference number: 1 (lower is better)
Translates to: GYAKQGEQQAVACLG*QRDTYHRSGTHSGK
Trigger: CTTCCCACTGTGTGTCCCGGACCTGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp CAGGAGGCTATGCCAAGCAAGGAGAGCAGCAAGCAGTTGCCTGTTTaGGATGGCAAAGGGACACATACCACAGGTCCGGGACACACAGTG +
Preference number: 1 (lower is better)
Translates to: QEAMPSKESSKQLPV*DGKGTHTTGPGHTV
Trigger: CACTGTGTGTCCCGGACCTGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATAGCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 90 bp TTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTCTA +
Preference number: 1 (lower is better)
Translates to: LAARPSRPHLVSLAT*GLIFLGSEAGAVAL
Trigger: TAGAGCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR GCA 90 bp CAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTaGCAGGCTCCGCCTGTTAATCTTTCCTCCTTCCTTGGAAATCTC +
Preference number: 1 (lower is better)
Translates to: QGAEGGTLTTSKAWV*QAPPVNLSSFLGNL
Trigger: GAGATTTCCAAGGAAGGAGGAAAGATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp CTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTaGTTCCAACATTTAGGGTGCTTGTGCAGTGAGTGGAGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: LPAGPCHCAQITTIL*FQHLGCLCSEWSWG
Trigger: CCCCCAGCTCCACTCACTGCACAAGCACCCTAAATGTTGGAAGCACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp TCCTTCTATCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTaGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: SFYPGNPLISFESTK*GLTQETGNQSKLFR
Trigger: CCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGATAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp GGCCCTGATTCATCTCAGGGGTCTTCTCTGATCCTCGGCTCTTTGTaGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACA +
Preference number: 1 (lower is better)
Translates to: GPDSSQGSSLILGSL*RSFYFLLPCKALRT
Trigger: TGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACAAAGAGCCGAGGATCAGAGAAGACCCCTGAGATGAATCAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 90 bp TCAGCCTCCAGTCTTAAGATGGGCACAGAAGGGCAAGAAGTAAGATaGCGAGTCCCAGAATTAGGACAAGCCATGAGCCAAGGCCTGGTC +
Preference number: 1 (lower is better)
Translates to: SASSLKMGTEGQEVR*RVPELGQAMSQGLV
Trigger: GACCAGGCCTTGGCTCATGGCTTGTCCTAATTCTGGGACTCGTCATCTTACTTCTTGCCCTTCTGTGCCCATCTTAAGACTGGAGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp CTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTaGAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGGGA +
Preference number: 1 (lower is better)
Translates to: LSLVNSHADGFFLTG*KVKTFCSGWRGGVG
Trigger: TCCCACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 90 bp GGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTaGCGGGGAGGAGTGGGAAGAGATTTGTGGCCACATCTTAGAGCT +
Preference number: 1 (lower is better)
Translates to: GFFLTGCKVKTFCSG*RGGVGRDLWPHLRA
Trigger: AGCTCTAAGATGTGGCCACAAATCTCTTCCCACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 90 bp CAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAACAGTCATaGGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTTCTG +
Preference number: 1 (lower is better)
Translates to: QGDRVLRVSIACKQS*GRILSYRLQGQNFL
Trigger: CAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATGCAGTCACCCCAGGTaGGGCATCCCCGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVACSHPR*GIPGPG
Trigger: CCCCGGGCCGGGGATGCCCCACCTGGGGTGACTGCA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTGGTGTCCAGGCTGCTaGGGTCGAGGGTCCGGGGGC +
Preference number: 2 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLWCPGC*GRGSGG
Trigger: GCCCCCGGACCCTCGACCCCAGCAGCCTGGACACCA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCTCGGAAGGGTGGGATaGGGCCAGGCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLLGRVG*GQAAAP
Trigger: AGGTGCAGCAGCCTGGCCCCATCCCACCCTTCCGAG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATACGGGGAGGTGGACTaGAGGTGGTGGGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVAYGEVD*RWWGAG
Trigger: CCCAGCACCCCACCACCTGCAGTCCACCTCCCCGTA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGCTCCCCAAATGTGGTTaGGGCTGGGAGGCAAGCATG +
Preference number: 2 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLLPKCG*GWEASM
Trigger: CATGCTTGCCTCCCAGCCCCAACCACATTTGGGGAG...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGGCCCACGCAGGACTGTaGGGCAGAACCCCGGGGCCT +
Preference number: 2 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVAHAGL*GRTPGP
Trigger: AGGCCCCGGGGTTCTGCCCCACAGTCCTGCGTGGGC...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCCAGACACAGCCCCCATaGTGCTTCCTACGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLQTQPP*CFLRGP
Trigger: TGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTG...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCGGGGTGCTGGGCAGATaGAGAGGCCTGTGCACTCAG +
Preference number: 2 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAGVLGR*RGLCTQ
Trigger: CTGAGTGCACAGGCCTCTCCATCTGCCCAGCACCCC...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCCCCCCTTCTGCTCCCTaGCACCCATCTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TVGASWGYLRVARGLRVSPPSAP*HPSPGA
Trigger: GGCCCCAGGAGATGGGTGCCAGGGAGCAGAAGGGGG...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR TCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTGTCGGGGACAGGCCTaGGCTGCAGAGTCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVCRGQA*AAESKE
Trigger: CTCCTTCGACTCTGCAGCTCAGGCCTGTCCCCGACA...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGGAAGGCTCCCCCTTCTaGTCCCTGGCACCCATCTCC +
Preference number: 2 (lower is better)
Translates to: GASWGYLRVARGLRVSCKEGSPF*SLAPIS
Trigger: GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTC...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR GCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTGGGATGGGGCCAGGCTaGTGCACCTCCCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: IADRLFRSQETSIQGGLLGMGPG*CTSPQG
Trigger: GCCCTGTGGGGAGGTGCAGCAGCCTGGCCCCATCCC...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTGGGATGGGGCCAGGCTaGTGCACCTCCCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: CKGGPALHASFKAENVSPGMGPG*CTSPQG
Trigger: GCCCTGTGGGGAGGTGCAGCAGCCTGGCCCCATCCC...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTCACCGTCAGGTCACTaGGGTGGAGGACAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLSPSGH*GGGQSG
Trigger: TCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTTGCAGTCACCCCAGGTaGGGCATCCCCGGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: LRKHKVGLDPGDWESVQACSHPR*GIPGPG
Trigger: CCCCGGGCCGGGGATGCCCCACCTGGGGTGACTGCA...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCGGGGCGCCAGAACACTaGTTTAACAATTTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLGAPEH*FNNFPG
Trigger: TCCGGGGAAATTGTTAAATCAGTGTTCTGGCGCCCC...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATGGGCCTGTCAAGTCTaGCTGCGGGACCCTGCCATT +
Preference number: 2 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRWACQV*LRDPAI
Trigger: AATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATTGTCCCCAGAGCAGCTaGCCCCATCGGCCGGGTCAC +
Preference number: 2 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNCPQSS*PHRPGH
Trigger: GTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACA...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTCAGGGTGGGCAACTTTaGGTGGGGGTGGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: DEHLSQGHKITLRARTRLQGGQL*VGVGRG
Trigger: CCCCCGCCCCACCCCCACCCAAAGTTGCCCACCCTG...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACA +
Preference number: 2 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGGLRVS*KAQPPT
Trigger: TGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCC...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCTCGGAAGGGTGGGATaGGGCCAGGCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: IADRLFRSQETSIQGGLLLGRVG*GQAAAP
Trigger: AGGTGCAGCAGCCTGGCCCCATCCCACCCTTCCGAG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAAGCTCCTCGGAAGGGTaGGATGGGGCCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKSSSEG*DGARLL
Trigger: CAGCAGCCTGGCCCCATCCCACCCTTCCGAGGAGCT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACTAGCAGCTCCACCTTaGCCCCATCCAAAAGGGACC +
Preference number: 2 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRLAAPP*PHPKGT
Trigger: GGTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCAGACTCCCCGGCCCAGTaGGGGACTGCAGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CGGVSISYFPARPSGHGSDSPAQ*GTAGLG
Trigger: CCCCAGCCCTGCAGTCCCCCACTGGGCCGGGGAGTC...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGACCAGGACAGCAGAGCTaGCCCCGCCGTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGPGQQS*PRREVA
Trigger: AGCTACCTCACGGCGGGGCCAGCTCTGCTGTCCTGG...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGTGCTTGTGCAGTGAGTaGAGCTGGGGGCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: LTQETGNQSKLFRLTRARCLCSE*SWGPAP
Trigger: GGGGGCAGGCCCCCAGCTCCACTCACTGCACAAGCA...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGATGCTTGTGCAGTGAGTaGAGCTGGGGGCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGCLCSE*SWGPAP
Trigger: GGGGGCAGGCCCCCAGCTCCACTCACTGCACAAGCA...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCAATGTGGCCACGACTaGCAGGAGGGGAACAAGAAG +
Preference number: 2 (lower is better)
Translates to: QPGQDMIARKELVGRAGPQCGHD*QEGNKK
Trigger: CTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGGGCTCAGAGGCAGGTaGAGTGGCTCTAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGGLRGR*SGSRGW
Trigger: CCAGCCTCTAGAGCCACTGCACCTGCCTCTGAGCCC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACTGCCTGCGGGACCCTaGCATTGTGCTCAAATCACA +
Preference number: 2 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRLPAGP*HCAQIT
Trigger: TGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGAGCTCCTCGGAAGGGTaGGATGGGGCCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWSSSEG*DGARLL
Trigger: CAGCAGCCTGGCCCCATCCCACCCTTCCGAGGAGCT...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGACTCCCCGGCCCAGTaGGGGACTGCAGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSDSPAQ*GTAGLG
Trigger: CCCCAGCCCTGCAGTCCCCCACTGGGCCGGGGAGTC...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGGGTGGGCAACTTTaGGTGGGGGTGGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: VADPSETAENGHDDEHLSQGGQL*VGVGRG
Trigger: CCCCCGCCCCACCCCCACCCAAAGTTGCCCACCCTG...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 90 bp GCCACTGACCAGGAGGCTATGCCAAGCAAGGAGAGCAGCAAGCAGTaGCCTGTTTGGGATGGCAAAGGGACACATACCACAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: ATDQEAMPSKESSKQ*PVWDGKGTHTTGPG
Trigger: TCCCGGACCTGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATAGCCTCCTGGTCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTGGGCTCAGAGGCAGGTaGAGTGGCTCTAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LRKHKVGLDPGDWESVQAGLRGR*SGSRGW
Trigger: CCAGCCTCTAGAGCCACTGCACCTGCCTCTGAGCCC...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACA +
Preference number: 2 (lower is better)
Translates to: CKGGPALHASFKAENVSPGLRVS*KAQPPT
Trigger: TGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCC...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAACACAGCCCCCATGCTaGTTCCTACGTGGCCCACGC +
Preference number: 2 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKTQPPC*FLRGPR
Trigger: GCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGT...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGGAGAGGGCTCCAAGTaGCCCAGCCCAAGACGGAGA +
Preference number: 2 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLGEGSK*PSPRRR
Trigger: TCTCCGTCTTGGGCTGGGGCACTTGGAGCCCTCTCC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGCCTTGCAGCTACAGTaGAGTCACCCCAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLALQLQ*SHPRWG
Trigger: GCCCCACCTGGGGTGACTGCACTGTAGCTGCAAGGC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTGTGGACTGCAGGTGGTaGGGTGCTGGGCAGATGGAG +
Preference number: 2 (lower is better)
Translates to: LRKHKVGLDPGDWESVQAVDCRW*GAGQME
Trigger: CTCCATCTGCCCAGCACCCCACCACCTGCAGTCCAC...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACTGTTGGGGCCAGTTaGGGCTATCTGCGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKTVGAS*GYLRVA
Trigger: GGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTACCCCAGGGAACTGTTaGGGCCAGTTGGGGCTATCT +
Preference number: 2 (lower is better)
Translates to: QSKLFRLTRARTQPELRRTPGNC*GQLGLS
Trigger: AGATAGCCCCAACTGGCCCCAACAGTTCCCTGGGGT...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 90 bp CCAGGAGGCTATGCCAAGCAAGGAGAGCAGCAAGCAGTTGCCTGTTaGGGATGGCAAAGGGACACATACCACAGGTCCGGGACACACAGT +
Preference number: 2 (lower is better)
Translates to: PGGYAKQGEQQAVAC*GWQRDTYHRSGTHS
Trigger: ACTGTGTGTCCCGGACCTGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATAGCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGACAAGACCTCGCGAGTaGGAAGACACATGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQTRPRE*EDTCGA
Trigger: GGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGAGTCACTGCGTCCTCTaGAGGGAGGTGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: ADPSETAENGHDDEHLSQSHCVL*REVGLA
Trigger: AGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTACACAGCCCCCATGCTaGTTCCTACGTGGCCCACGC +
Preference number: 2 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFTQPPC*FLRGPR
Trigger: GCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGT...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTAGGGGGTCTCCTTCCTaGTATCAGCTGCCCCAGACT +
Preference number: 2 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIRGSPS*YQLPQT
Trigger: AGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCAGCTCAGATCGAAGTaGGGAAAGAGAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: QPGQDMIARKELVGRAGPQLRSK*GKRGKR
Trigger: CCTTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGGGTCAGCTCTTGCAGTaGGCTTGGCTGGCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRGQLLQ*AWLAAP
Trigger: GGGGGCAGCCAGCCAAGCCCACTGCAAGAGCTGACC...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTACTGTTGGGGCCAGTTaGGGCTATCTGCGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFTVGAS*GYLRVA
Trigger: GGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTATGCTGCTTCCTACGTaGCCCACGCAGGACTGTGGG +
Preference number: 2 (lower is better)
Translates to: DEHLSQGHKITLRARTRLMLLPT*PTQDCG
Trigger: CCCACAGTCCTGCGTGGGCCACGTAGGAAGCAGCAT...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGGGCGGGGGTCAGGGTaGCGGGCTGTCCTCCCCATC +
Preference number: 2 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTGRGSG*RAVLPI
Trigger: GATGGGGAGGACAGCCCGGCACCCTGACCCCCGCCC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCAGCTCAGATCGAAGTaGGGAAAGAGAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGQLRSK*GKRGKR
Trigger: CCTTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
3UTR-3UTR CCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCCCCACTGTTCATGCTTaGAAAAGGACGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLPTVHA*KRTVGA
Trigger: TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGG...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGTGGCTTACGGGGAGGTaGACTGCAGGTGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRWLTGR*TAGGGV
Trigger: CACCCCACCACCTGCAGTCCACCTCCCCGTAAGCCA...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTAAATGTGGTTGGGGCTaGGAGGCAAGCATGGCTTAC +
Preference number: 2 (lower is better)
Translates to: QSKLFRLTRARTQPELRRKCGWG*EASMAY
Trigger: GTAAGCCATGCTTGCCTCCCAGCCCCAACCACATTT...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGTCCCTTTGGGATTTCTaGCCCCCAAGAGCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LTQETGNQSKLFRLTRARSLWDF*PPRAEG
Trigger: TCCCTCAGCTCTTGGGGGCCAGAAATCCCAAAGGGA...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGGTGAGAAGACACATGTaGTGCCGCGGGCATGGCTGG +
Preference number: 2 (lower is better)
Translates to: ADPSETAENGHDDEHLSQVRRHM*CRGHGW
Trigger: CCAGCCATGCCCGCGGCACCACATGTGTCTTCTCAC...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTACACTGGGCGCCACATaGAGAGGGCTCCAAGTGCCC +
Preference number: 2 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCTLGAT*RGLQVP
Trigger: GGGCACTTGGAGCCCTCTCCATGTGGCGCCCAGTGT...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCGCCTGCCCCCTAACATaGACCTTGGACATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PWKSRKATPCAAFESSGCACPLT*TLDIPE
Trigger: TTCAGGGATGTCCAAGGTCCATGTTAGGGGGCAGGC...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGTGAGGACAGGGCCCTaGCACAGGACTATGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLVRTGP*HRTMLK
Trigger: CTTCAGCATAGTCCTGTGCCAGGGCCCTGTCCTCAC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGGACCTTGGACATCCCTaGAAGAGTGGGCAGAGAATC +
Preference number: 2 (lower is better)
Translates to: LTQETGNQSKLFRLTRARDLGHP*KSGQRI
Trigger: GATTCTCTGCCCACTCTTTCAGGGATGTCCAAGGTC...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGCTGTCCCACTGTTCATaGTTGGAAAAGGACGGTGGG +
Preference number: 2 (lower is better)
Translates to: LTQETGNQSKLFRLTRARLSHCS*LEKDGG
Trigger: CCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAG...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTTGGTGTCCAGGCTGCTaGGGTCGAGGGTCCGGGGGC +
Preference number: 2 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASWCPGC*GRGSGG
Trigger: GCCCCCGGACCCTCGACCCCAGCAGCCTGGACACCA...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGTCCCCAGAGCAGCTaGCCCCATCGGCCGGGTCAC +
Preference number: 2 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNCPQSS*PHRPGH
Trigger: GTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACA...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 90 bp TATCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTaGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACT +
Preference number: 2 (lower is better)
Translates to: YPGNPLISFESTKWG*TQETGNQSKLFRLT
Trigger: AGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 90 bp TCCTCCTTCCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTaGAGAGTTCTGGCTGCTTCAGAAGAGTCCGCCACTCACGTGAAA +
Preference number: 2 (lower is better)
Translates to: SSFLGNLARQLHALP*RVLAASEESATHVK
Trigger: TTTCACGTGAGTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGGAAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGGGGCGCCAGAACACTaGTTTAACAATTTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKGAPEH*FNNFPG
Trigger: TCCGGGGAAATTGTTAAATCAGTGTTCTGGCGCCCC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAAGAATCCAACTCTCATaGAGCACAACTCGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGRIQLS*STTRGV
Trigger: GACACCCCGAGTTGTGCTTCATGAGAGTTGGATTCT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCTGCAGGTGGTGGGGTaGTGGGCAGATGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNLQVVG*WADGEA
Trigger: GGCCTCTCCATCTGCCCAGCACCCCACCACCTGCAG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCACTTGGAAAAGGACGGTaGGTGCAGGAGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: CGGVSISYFPARPSGHGSLGKGR*VQEGQA
Trigger: TGCCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAG...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCAAACTCCCCAAATGTaGTTGGGGCTGGGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGQTPQM*LGLGGK
Trigger: CTTGCCTCCCAGCCCCAACCACATTTGGGGAGTTTG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR CAA 90 bp AGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTaGTGCTTCCAACATTTAGGGTGCTTGTGCAGTGAGTGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SLPAGPCHCAQITTI*CFQHLGCLCSEWSW
Trigger: CCAGCTCCACTCACTGCACAAGCACCCTAAATGTTGGAAGCACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: APRLKREAQDQRCNGKTGVSLAT*GLIFLG
Trigger: GCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAAC...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGCAGCGGACTCCCTTTaGGATTTCTGGCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSAADSL*DFWPPR
Trigger: TCTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGC...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAACGGAGGAAGGCACTaGGCGTCAGGCGGCCTAGAG +
Preference number: 2 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTNGGRH*ASGGLE
Trigger: CTCTAGGCCGCCTGACGCTCAGTGCCTTCCTCCGTT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCAGACACAGCCCCCATaGTGCTTCCTACGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNQTQPP*CFLRGP
Trigger: TGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTGCAAGAACACGCCTTaGAGCTACAGTGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCCKNTP*SYSAVT
Trigger: GGTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCAAGAGTCAATGACACTTaGCAGGACAGCAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: CGGVSISYFPARPSGHGSRVNDT*QDSRAG
Trigger: GCCAGCTCTGCTGTCCTGGCAAGTGTCATTGACTCT...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAACTGGCACCCATCTCCTaGGGCCTGTCCCACTGTTCA +
Preference number: 2 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKLAPIS*GLSHCS
Trigger: TGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAG...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGGGTGGAGGACAAAGTaGAGGGGTGCCGGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTGWRTK*RGAGQL
Trigger: GAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAACAGAGAGAGAGAAGCTaGAGAGACTCCCCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKQRERS*RDSPAQ
Trigger: CTGGGCCGGGGAGTCTCTCCAGCTTCTCTCTCTCTG...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTCCTGTCAAGTCTGCCTaGGGGACCCTGCCATTGTGC +
Preference number: 2 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASPVKSA*GTLPLC
Trigger: GCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAATGCAGTGGGCTTGGCTaGCTGCCCCCAAAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKCSGLG*LPPKVE
Trigger: CTCTACTTTTGGGGGCAGCCAGCCAAGCCCACTGCA...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGACCCCAGGGAACTGTTaGGGCCAGTTGGGGCTATCT +
Preference number: 2 (lower is better)
Translates to: RVSIACKQSCGRILSYRLTPGNC*GQLGLS
Trigger: AGATAGCCCCAACTGGCCCCAACAGTTCCCTGGGGT...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 90 bp TCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTaGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SIACKQSCGRILSYR*QGQNFLFRLAGRSG
Trigger: CCCACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR TCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTCGAAAATGTGTCTCCTaGATAACCAGAGAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: DEHLSQGHKITLRARTRLRKCVS*ITRERE
Trigger: TTCTCTCTCTCTGGTTATTCAGGAGACACATTTTCG...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTACCAGGGGATATGCCTaGTCCCAGCCCAGACCACAT +
Preference number: 2 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASTRGYA*SQPRPH
Trigger: ATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGT...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTaGCGGGGAGGAGTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKTFCSG*RGGVGR
Trigger: TCTTCCCACTCCTCCCCGCCAACCTGAACAGAAAGT...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCCTTGATAATTTTCTaGAAGGGAGGGCCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNSLIIF*KGGPAL
Trigger: GAGCGCAGGCCCTCCCTTGCAGAAAATTATCAAGGA...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR GCA 90 bp ATAACTTTCATACACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACAGTCACTGCAGCCACCTaGTGGTGTCTCCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: ITFIHYVQPSAEVQNIYTVTAAT*WCLPPP
Trigger: TGGTGGAGGGAGACACCAGCAGGTGGCTGCAGTGAC...TGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTGTATGAAAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGACACAGAACCACCTCTaGAAAGTCCAAAAGTCACTG +
Preference number: 2 (lower is better)
Translates to: RVSIACKQSCGRILSYRLTQNHL*KVQKSL
Trigger: CAGTGACTTTTGGACTTTCCAGAGGTGGTTCTGTGT...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp CGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTaGCAGGCCCCGGAACGGAGGAAGGCACTGAGCGTC +
Preference number: 3 (lower is better)
Translates to: RGHGWCKAARHG*QAPERRKALSV
Trigger: GACGCTCAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGGTGCCGGTCAGCTCTaGCAGTGGGCTTGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: WCKAARHGCQAPERRKALGAGQL*QWAWLA
Trigger: AGCCAGCCAAGCCCACTGCAAGAGCTGACCGGCACC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR CCA 72 bp CGAGTGAGAAGACACATGTGGTGCCGCGGGCATGGCTaGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCG +
Preference number: 3 (lower is better)
Translates to: RVRRHMWCRGHG*CKAARHGCQAP
Trigger: CGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp GCCTTCCCGGGGGCGCTGGGCACAAGACCTCGCGAGTaGGAAGACACATGTGGTGCCGCGGGCATGGCTGGT +
Preference number: 3 (lower is better)
Translates to: AFPGALGTRPRE*EDTCGAAGMAG
Trigger: ACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGTGCCCAGCGCCCCCGGGAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp CCCATCCAAGCCACCTCCCAGCAGACACAGCCCCCATaGTGCTTCCTACGTGGCCCACGCAGGACTGTGGGG +
Preference number: 3 (lower is better)
Translates to: PIQATSQQTQPP*CFLRGPRRTVG
Trigger: CCCCACAGTCCTGCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTGCTGGGAGGTGGCTTGGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp CCCCAACACTGGGCGCCACATGGAGAGGGCTCCAAGTaGCCCAGCCCAAGACGGAGAGGAGCCAAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: PQHWAPHGEGSK*PSPRRRGAKGR
Trigger: TCTGCCCTTGGCTCCTCTCCGTCTTGGGCTGGGGCACTTGGAGCCCTCTCCATGTGGCGCCCAGTGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp CCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTaGCCACCTCAAAGGCTTGGGTGTGCCAGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: PLSLPKGLKVAL*PPQRLGCARLR
Trigger: GCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGACAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp ATCCAAGCCACCTCCCAGCAGACACAGCCCCCATGCTaGTTCCTACGTGGCCCACGCAGGACTGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: IQATSQQTQPPC*FLRGPRRTVGQ
Trigger: CTGCCCCACAGTCCTGCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTGCTGGGAGGTGGCTTGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GCTGGGCACAAGACCTCGCGAGTGAGAAGACACATGTaGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGG +
Preference number: 3 (lower is better)
Translates to: AGHKTSRVRRHM*CRGHGWCKAAR
Trigger: CCGGGCAGCCTTACACCAGCCATGCCCGCGGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGTGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp ACCGCCGGACACTCCAGAACTTCACCGTCAGGTCACTaGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGC +
Preference number: 3 (lower is better)
Translates to: TAGHSRTSPSGH*GGGQSGGVPVS
Trigger: GCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR CCA 72 bp TTCCCTCCTCTGCAAAGCAAACAGAGGAGGCGGCCCTaGAGGGCCGGGGCAGCGGACTCCCTTTGGGATTTC +
Preference number: 3 (lower is better)
Translates to: FPPLQSKQRRRP*RAGAADSLWDF
Trigger: GAAATCCCAAAGGGAGTCCGCTGCCCCGGCCCTCCAGGGCCGCCTCCTCTGTTTGCTTTGCAGAGGAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp CAGGCACCCCCAATCTCACTTTGGACAGAGCCAACGTaGGGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCT +
Preference number: 3 (lower is better)
Translates to: QAPPISLWTEPT*GDPPGPGPVKS
Trigger: AGACTTGACAGGCCCAGGCCCGGGAGGATCCCCCCACGTTGGCTCTGTCCAAAGTGAGATTGGGGGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp CACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTaGAGGTGGCACTCTGACCACCTCAAAGGCTTGGGT +
Preference number: 3 (lower is better)
Translates to: HSQTHRCPFPRG*RWHSDHLKGLG
Trigger: ACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp CTGGCACCCATCTCCTGGGGCCTGTCCCACTGTTCATaGTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGG +
Preference number: 3 (lower is better)
Translates to: LAPISWGLSHCS*LEKDGGCRRDR
Trigger: CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
3UTR GCA 72 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTaGGGGACCCTGCCATTGTGCTCAAATCACAACCAT +
Preference number: 3 (lower is better)
Translates to: GDPPGPGPVKSA*GTLPLCSNHNH
Trigger: ATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATaGCCCCCAGAGCTGAGAGCTAGCAGGGCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: DMPAPSPDHIGG*PPELRASRAKK
Trigger: CTTCTTTGCCCTGCTAGCTCTCAGCTCTGGGGGGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAAACTGTTGGGGCCAGTaGGGGCTATCTGCGGGTTGC +
Preference number: 3 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRNCWGQ*GLSAGC
Trigger: GCAACCCGCAGATAGCCCCAACTGGCCCCAACAGTT...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp CCAGAATTAGGACAAGCCATGAGCCAAGGCCTGGTCTaGGCAAGGGCAGCCCCCTGTCCCAGACACAGGCAC +
Preference number: 3 (lower is better)
Translates to: PELGQAMSQGLV*ARAAPCPRHRH
Trigger: GTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGCCTTGGCTCATGGCTTGTCCTAATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: GYLRVARGLRVS*KAQPPTPGFLS
Trigger: GCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp AACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTaGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: NFTVRSLGWRTK*RGAGQLLQWAW
Trigger: CCAAGCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR CCA 72 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTaGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTG +
Preference number: 3 (lower is better)
Translates to: RTLQNFTVRSLG*RTKWRGAGQLL
Trigger: CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
3UTR-3UTR CAA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGGGCAGCGGACTCCCTTaGGGATTTCTGGCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: APRLKREAQDQRCNGKTGGSGLP*GFLAPK
Trigger: CTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGCC...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GTCCGGGACACACAGTGGGAAGAAAGTCACTGCTCCTaGAGGGCAGGCTCTGCCCACACAAACACGATGGTG +
Preference number: 3 (lower is better)
Translates to: VRDTQWEESHCS*RAGSAHTNTMV
Trigger: CACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCACTGTGTGTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp CTGGCACAGGACTATGCTGAAGAGGCCCAAGGGCAGTaGGGATGGAAGACTCCTTCTATCCAGGGAACCCGC +
Preference number: 3 (lower is better)
Translates to: LAQDYAEEAQGQ*GWKTPSIQGTR
Trigger: GCGGGTTCCCTGGATAGAAGGAGTCTTCCATCCCCACTGCCCTTGGGCCTCTTCAGCATAGTCCTGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTaGGTGTGCCAGGCTCCGCCTGTTAATCTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: GAEGGTLTTSKA*VCQAPPVNLSS
Trigger: GGAGGAAAGATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATaGAACGGAAAAACAGGGTGGGCAACTTTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: APRLKREAQDQR*NGKTGWATLGG
Trigger: CCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp ACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTaGCCCAGACTTCAATACCACATCCAGCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: TSIQGGLLPAIS*PRLQYHIQQGQ
Trigger: CTGGCCCTGCTGGATGTGGTATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp CCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTaGCATTGTGCTCAAATCACAACCATTTTGTGCTTC +
Preference number: 3 (lower is better)
Translates to: PGLGLSSLPAGP*HCAQITTILCF
Trigger: GAAGCACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTaGCCACGACTGCCAGGAGGGGAACAAGAAGGGATA +
Preference number: 3 (lower is better)
Translates to: EKGAEPVQQETM*PRLPGGEQEGI
Trigger: TATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR CCA 72 bp TGTTCAGGTTGGCGGGGAGGAGTGGGAAGAGATTTGTaGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCAC +
Preference number: 3 (lower is better)
Translates to: CSGWRGGVGRDL*PHLRAKGVARH
Trigger: GTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTCCCACTCCTCCCCGCCAACCTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GTGCGGGGTTTAGAGAGCGCTTTACTCCTGGTCCCATaGCGTAAAGATGTGGCTGGGCCTGACAAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: VRGLESALLLVP*RKDVAGPDKAQ
Trigger: CTGAGCCTTGTCAGGCCCAGCCACATCTTTACGCCATGGGACCAGGAGTAAAGCGCTCTCTAAACCCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GCAAAGGGACACATACCACAGGTCCGGGACACACAGTaGGAAGAAAGTCACTGCTCCTGCAGGGCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: AKGHIPQVRDTQ*EESHCSCRAGS
Trigger: AGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCACTGTGTGTCCCGGACCTGTGGTATGTGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp AGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: RPSRPHLVSLAT*GLIFLGSEAGA
Trigger: TGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR TCA 72 bp GGGGTGGCCAGAGGAAGAAGGATTTCCAGCCATTGCTaGCAGACTGTTCAGGTCCCAGGAGACCAGCATCCA +
Preference number: 3 (lower is better)
Translates to: GVARGRRISSHC*QTVQVPGDQHP
Trigger: TGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAATGGCTGGAAATCCTTCTTCCTCTGGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTaGTATCAGCTGCCCCAGACTTCAATACCACATCCA +
Preference number: 3 (lower is better)
Translates to: VPGDQHPRGSPS*YQLPQTSIPHP
Trigger: TGGATGTGGTATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTGGCAGCGGACTCCCTTaGGGATTTCTGGCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCGSGLP*GFLAPK
Trigger: CTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGCC...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTaGCAGGCTCCGCCTGTTAATCTTTCCTCCTTCCTT +
Preference number: 3 (lower is better)
Translates to: EGGTLTTSKAWV*QAPPVNLSSFL
Trigger: AAGGAAGGAGGAAAGATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTTCTAGCAGCTCCACCTaGGCCCCATCCAAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFSSSST*APSKRD
Trigger: GTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAGA...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGTGCAAGAACACGCCTaGCAGCTACAGTGCAGTCAC +
Preference number: 3 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLVQEHA*QLQCSH
Trigger: GTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCAC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCTGCGGGACCCTGCCATaGTGCTCAAATCACAACCAT +
Preference number: 3 (lower is better)
Translates to: PWKSRKATPCAAFESSGCCGTLP*CSNHNH
Trigger: ATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCA...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp TTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTaGGAGTTCTGGCTGCTTCAGAAGAGTCCGCCACTC +
Preference number: 3 (lower is better)
Translates to: LEISQGNSMRCL*EFWLLQKSPPL
Trigger: GAGTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp GGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTaGAAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: GEEPRAETQNHL*KVQKSLRPLKG
Trigger: TCCCTTCAGAGGACGCAGTGACTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp AAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTaGTTCAGAAGAGTCCGCCACTCACGTGAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: KATPCAAFESSG*FRRVRHSRESK
Trigger: TTTGCTTTCACGTGAGTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CCA 72 bp ACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTaGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: TARRGTRRDNAL*LHSLISSPASL
Trigger: GAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
3UTR GCA 72 bp TTCCTCCTTCCTTGGAAATCTCGCAAGGCAACTCCATaGGCTGCCTTTGAGAGTTCTGGCTGCTTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: FLLPWKSRKATP*AAFESSGCFRR
Trigger: TCTTCTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGGAAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GGCTCTTTGTGGAGGAGTTTCTATTTCCTACTTCCCTaGAAGGCCCTCAGGACATGGTTCACAGGACTGAAC +
Preference number: 3 (lower is better)
Translates to: GSLWRSFYFLLP*KALRTWFTGLN
Trigger: GTTCAGTCCTGTGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTaGAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAG +
Preference number: 3 (lower is better)
Translates to: ETLPTPSSLIIF*KGGPALHASFK
Trigger: CTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR TCA 72 bp AGTCTTAAGATGGGCACAGAAGGGCAAGAAGTAAGATaGCGAGTCCCAGAATTAGGACAAGCCATGAGCCAA +
Preference number: 3 (lower is better)
Translates to: SLKMGTEGQEVR*RVPELGQAMSQ
Trigger: TTGGCTCATGGCTTGTCCTAATTCTGGGACTCGTCATCTTACTTCTTGCCCTTCTGTGCCCATCTTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp GTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTaGAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: VNSHADGFFLTG*KVKTFCSGWRG
Trigger: TCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCCAACTCCCTCTTCCTaGATAATTTTCTGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNPTPSS*IIFCKG
Trigger: TCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR GCA 72 bp AGAGTCTTACGTGTTTCTATCGCTTGTAAACAGTCATaGGGACGGATTCTTTCTTACAGGTTGCAAGGTCAA +
Preference number: 3 (lower is better)
Translates to: RVLRVSIACKQS*GRILSYRLQGQ
Trigger: TTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACGTAAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGCCTTCCCGGGGGCGCTaGGCACAAGACCTCGCGAGT +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRPSRGR*AQDLAS
Trigger: ACTCGCGAGGTCTTGTGCCCAGCGCCCCCGGGAAGG...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLHALLL*PALALG
Trigger: GCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGCGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRRRSRD*HLSLAA
Trigger: GGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACG...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGTACGGGGAGGTGGACTaGAGGTGGTGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRYGEVD*RWWGAG
Trigger: CCCAGCACCCCACCACCTGCAGTCCACCTCCCCGTA...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGCCCTTCCCAAGGGGCTaGAGGTGGCACTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRPFPRG*RWHSDH
Trigger: GTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGG...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGGGATGGGGCCAGGCTaGTGCACCTCCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPGMGPG*CTSPQG
Trigger: GCCCTGTGGGGAGGTGCAGCAGCCTGGCCCCATCCC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGGGAGAGGGCTCCAAGTaGCCCAGCCCAAGACGGAGA +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRGEGSK*PSPRRR
Trigger: TCTCCGTCTTGGGCTGGGGCACTTGGAGCCCTCTCC...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGGACCACATCGGGGGATaGCCCCCAGAGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRDHIGG*PPELRA
Trigger: AGCTCTCAGCTCTGGGGGGCATCCCCCGATGTGGTC...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAACGCAGCAGTCCCCCTaGCCGGCCATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRTQQSP*PAMALW
Trigger: CCAGAGGGCCATGGCCGGCCAGGGGGACTGCTGCGT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGGTGGACTGCAGGTGGTaGGGTGCTGGGCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRVDCRW*GAGQME
Trigger: CTCCATCTGCCCAGCACCCCACCACCTGCAGTCCAC...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGGCCCCCAAAGAGGTGTaGGATGGCCCTCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRAPKEV*DGPRDD
Trigger: ATCATCCCGAGGGCCATCGCACACCTCTTTGGGGGC...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCTCCAACCGGGGAGATaGTGCCCCTCAGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLLQPGR*CPSGPP
Trigger: CGGAGGTCCTGAGGGGCATCATCTCCCCGGTTGGAG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATCCACTGGCGCACGATaGTGGAGACAGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRSTGAR*WRQSGP
Trigger: GGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGTGGA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGAGTGGGGCCGATGGTaGCCGTCACACACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPEWGRW*PSHTRP
Trigger: TGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCTGCAGGTGGTGGGGTaGTGGGCAGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLLQVVG*WADGEA
Trigger: GGCCTCTCCATCTGCCCAGCACCCCACCACCTGCAG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAACTGGCGCACGATGCTaGAGACAGAGCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPTGARC*RQSGPL
Trigger: CAGGGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAACTGGCGCACGATGCTaGAGACAGAGCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRTGARC*RQSGPL
Trigger: CAGGGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAAGGGTCAGGGCAGGGTaGTGGCGCGGCCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRRVRAG*WRGPLW
Trigger: CCATAAAGGGCCGCGCCACCACCCTGCCCTGACCCT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAGCCGCTGCTCCTTCTTaGGCTGTGCGATCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRAAAPS*AVRSPG
Trigger: ACCGGGAGATCGCACAGCTCAAGAAGGAGCAGCGGC...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGGCTGGCCGTCTGGGTaGCCGTCAGGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPGWPSG*PSGTSQ
Trigger: CTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPSRRRC*SSRICF
Trigger: GAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAAGACATTGCGGTCATTaGGGGGCCGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPRHCGH*GAEWEG
Trigger: CCCCTCCCACTCGGCCCCGCAATGACCGCAATGTCT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTGGGCTCAGAGGCAGGTaGAGTGGCTCTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLGLRGR*SGSRGW
Trigger: CCAGCCTCTAGAGCCACTGCACCTGCCTCTGAGCCC...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCGTTCATCTGGGTGCTaGCTGTGGTGCGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLRSSGC*LWCGTG
Trigger: CCCTGTCCCGCACCACAGCCAGCACCCAGATGAACG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTCGGGCGTGCTCTTTCTaGGCGGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPRACSF*AACSFC
Trigger: GCAGAAGCTGCAGGCCGCCCAGAAAGAGCACGCCCG...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCATCTCCCGGTTCCTCTTaGTCTCCACTAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPSPGSS*SPLAAA
Trigger: GGCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGA...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGGCAGAGGATGGGCTTaGTGTGGCCTTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPGRGWA*CGLRPW
Trigger: CCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCACGAAGCAGCCCTCGATaGGCTTGCTCACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPRSSPR*ACSHRW
Trigger: CCACCTGTGTGAGCAAGCTCATCGAGGGCTGCTTCG...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGGCACAGGTGGATGGTaGAGATGGCGTGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALGTGGW*RWRGSV
Trigger: CACGCTCCCACGCCATCTTCACCATCCACCTGTGCC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTAACGGAGGAAGGCACTaGGCGTCAGGCGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPNGGRH*ASGGLE
Trigger: CTCTAGGCCGCCTGACGCTCAGTGCCTTCCTCCGTT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGCTCGGGATGATGCCCTaGTCCTCCTCCGACGTTGCC +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALLGMMP*SSSDVA
Trigger: GGCAACGTCGGAGGAGGAGCAGGGCATCATCCCGAG...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCGGGCTGGGTGCACATaGGCATCTGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLRAGCT*ASGTGG
Trigger: TCCACCTGTGCCAGATGCGCATGTGCACCCAGCCCG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTATGGTGCTGAGGTTCTaGAGCACACGGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLMVLRF*STRSRS
Trigger: GGAGCGCGACCGTGTGCTGCAGAACCTCAGCACCAT...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCACTCAGGACCATCTCCTaGTGCCGCTTCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPLRTIS*CRFWDS
Trigger: GGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCTGAG...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGCCATGGAGACACACTaGAGTGGGGCCGTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPAMETH*SGAVRA
Trigger: TGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGCCATGGAGACACACTaGAGTGGGGCCGTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALAMETH*SGAVRA
Trigger: TGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGTGCAAGAACACGCCTTaGAGCTACAGTGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRCKNTP*SYSAVT
Trigger: GGTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCA...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATCAGAGGCGGGGGTCTaGGGGCCAATGCCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVASEAGV*GPMPEA
Trigger: TGCCTCGGGCATTGGCCCCCAGACCCCCGCCTCTGA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCCCCCCTGGCCGGCCATaGCCCTCTGGAGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAPPGRP*PSGARV
Trigger: GACCCTAGCTCCAGAGGGCCATGGCCGGCCAGGGGG...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLMLDLR*RVSGSR
Trigger: CCGTGACCCTGACACCCGCCACCGCAGGTCCAACAT...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLSRLAS*LMSWVT
Trigger: CGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCT...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPAQTWA*PGASVQ
Trigger: CTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGGTGGAGATATCCAGTaGGGGGCCCAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPGGDIQ*GAQALS
Trigger: GCTGAGTGCCTGGGCCCCCCACTGGATATCTCCACC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTTCCCCTGAGATCACCTaGCCCGAGGACGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLSPEIT*PEDVRV
Trigger: GACTCTCACGTCCTCGGGCCAGGTGATCTCAGGGGA...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTCCTCTGAAGGGAGGTaGGGCTGGCTCTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLSSEGR*GWLLAP
Trigger: GGGAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGA...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGCGAAGCAGCCCTCGATaGGCTTGCTCACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALRSSPR*ACSHRW
Trigger: CCACCTGTGTGAGCAAGCTCATCGAGGGCTGCTTCG...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGATGGCGTGGGAGCGTaGGCTCTGCACGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPDGVGA*ALHVHL
Trigger: CAGATGAACGTGCAGAGCTCACGCTCCCACGCCATC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCCTAGCCGAGGCCCGTaGGAGGCTGCGGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQPSRGP*EAAAQG
Trigger: TCCCTGCGCCGCAGCCTCTCACGGGCCTCGGCTAGG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCCTAGCCGAGGCCCGTaGGAGGCTGCGGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPPSRGP*EAAAQG
Trigger: TCCCTGCGCCGCAGCCTCTCACGGGCCTCGGCTAGG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGCTGCACATTGTAGATaGGGGCCTGCAGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALAAHCR*GPAARG
Trigger: ACCCCGAGCTGCAGGCCCTCATCTACAATGTGCAGC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGCCCTTGTCCAGCGCTaGCCCCTGGCTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPALVQR*PLALIT
Trigger: AGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGGGC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000360529.9
CDS-3UTR TCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCCGAATGCACTTGGCTaGGTCCCGGATGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLPNALG*VPDVPH
Trigger: GTGTGGGACATCCGGGACTCAGCCAAGTGCATTCGG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGCGTTTTGTCCAGGCCTaGAGGCTCCCCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALRFVQA*RLPLLL
Trigger: GAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACG...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGGCACAGGACTATGCTaGAGAGGCCCAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALGTGLC*RGPRAV
Trigger: CACTGCCCTTGGGCCTCTTCAGCATAGTCCTGTGCC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCTCCTCCTCCGACGTTaGCATGTCAAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLLLLRR*HVKASA
Trigger: GGCACTGGCTTTGACATGGCAACGTCGGAGGAGGAG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGGCCCCCAAAGAGGTGTaGGATGGCCCTCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLAPKEV*DGPRDD
Trigger: ATCATCCCGAGGGCCATCGCACACCTCTTTGGGGGC...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRHALLL*PALALG
Trigger: GCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPASMAS*MAFTRS
Trigger: GCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTGTTCTGGGAGGAGCCTaGCATATCCGTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLVLGGA*HIRLPQ
Trigger: CTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAAC...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTGTGGCCAGTCAGCTTaGCGACAGGCTGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPCGQSA*RQAGTC
Trigger: GCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGCAGACACAGCCCCCATaGTGCTTCCTACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALQTQPP*CFLRGP
Trigger: TGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTG...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTCCTGCTGCCGCTTCTaGGACTCCAGAGCTCGGATC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPSCCRF*DSRARI
Trigger: GATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCCAGAGTCCAGCATaGGTGGCTTTAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLPQSPA*VALVLH
Trigger: GTGCAGGACTAAAGCCACCCATGCTGGACTCTGGGG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLTVGAG*SPKKWL
Trigger: CAACCACTTCTTGGGGGACCATCCTGCGCCCACTGT...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCATCCAGGCAGAGGATaGGCTTGGTGTGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLHPGRG*AWCGLR
Trigger: CCGAAGGCCACACCAAGCCCATCCTCTGCCTGGATG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGATGCTGCTTCCTACGTaGCCCACGCAGGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLMLLPT*PTQDCG
Trigger: CCCACAGTCCTGCGTGGGCCACGTAGGAAGCAGCAT...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGGTTGCCTGTTTGGGATaGCAAAGGGACACATACCAC +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRVACLG*QRDTYH
Trigger: GTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAAC...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATCTTCCTCCGCTGCCTaGCCTCCTTCTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRSSSAA*PPSSLA
Trigger: GGCTAAAGAAGAAGGAGGTCAGGCAGCGGAGGAAGA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCCCAAGAAGTGGTTaGTTTTGCGGTTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLPPRSG*FCGSTG
Trigger: GCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCCGCCCTGAGCACTGGTaGTGGCACGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: VTGVEDKVEGCRSALAVGRPEHW*WHGWMW
Trigger: CCACATCCACCCGTGCCATCACCAGTGCTCAGGGCG...GCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCATGGGGATTTGCTGGATaGGCTCCTGCTGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPWGFAG*APAGLG
Trigger: ACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCA...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLSISSI*SRAISA
Trigger: GGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGA...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTCACCAATGGCCTCATTaGCATCGCCGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPHQWPH*HRRPWL
Trigger: TAGCCAAGGCCGGCGATGGCAATGAGGCCATTGGTG...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGAACTCCTGTCGCCGCTaGTCCTTCTTGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLNSCRR*SFLSCA
Trigger: CGCACAGCTCAAGAAGGAGCAGCGGCGACAGGAGTT...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCAGACATTGCGGTCATTaGGGGGCCGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLRHCGH*GAEWEG
Trigger: CCCCTCCCACTCGGCCCCGCAATGACCGCAATGTCT...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATGCTGGATGAGCTCCTaGTGGTCTAGGTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRCWMSS*WSRSHF
Trigger: GAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCGAAGGCTCCCCCTTCTaGTCCCTGGCACCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLEGSPF*SLAPIS
Trigger: GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTC...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGGGGATGGGGCCAGGCTaGTGCACCTCCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVGMGPG*CTSPQG
Trigger: GCCCTGTGGGGAGGTGCAGCAGCCTGGCCCCATCCC...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCTGCCTGCGGGACCCTaGCATTGTGCTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLLPAGP*HCAQIT
Trigger: TGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCCCCCTGGCCGGCCATaGCCCTCTGGAGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLPPGRP*PSGARV
Trigger: GACCCTAGCTCCAGAGGGCCATGGCCGGCCAGGGGG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCCCCCTGGCCGGCCATaGCCCTCTGGAGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGPPGRP*PSGARV
Trigger: GACCCTAGCTCCAGAGGGCCATGGCCGGCCAGGGGG...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGACGCAGCAGTCCCCCTaGCCGGCCATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRTQQSP*PAMALW
Trigger: CCAGAGGGCCATGGCCGGCCAGGGGGACTGCTGCGT...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGAGCTCCTCCTGGGAGTaGATGAGGCGAGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALSSSWE*MRREVT
Trigger: CGTCACTTCTCGCCTCATCCACTCCCAGGAGGAGCT...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTACCACCTTCTTGCTCTaGTCCCCTAAGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLTTFLL*SPKALI
Trigger: GATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGT...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATGCCATCGCCGGCCTTaGCTAGCAGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVACHRRP*LAAGWP
Trigger: AGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCAGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVAVCNRR*LFSSSS
Trigger: CGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGAC...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGTGCCGCGGGCATGGCTGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GAAGMAGVRLPGTGARPRSFSSY*CLSVCN
Trigger: GTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCT...CCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTAGGATGGGCTTGGTGTaGCCTTCGGCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPRMGLV*PSAMET
Trigger: TGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATGCTGGCTGGCCGTCTaGGTGACCGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVACWLAV*VTVRHI
Trigger: GATGTGCCTGACGGTCACCCAGACGGCCAGCCAGCA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGTGCAGTGGGCTTGGCTaGCTGCCCCCAAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALCSGLG*LPPKVE
Trigger: CTCTACTTTTGGGGGCAGCCAGCCAAGCCCACTGCA...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGTGGTGTCCAGGCTGCTaGGGTCGAGGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GASWGYLRVARGLRVSCKWCPGC*GRGSGG
Trigger: GCCCCCGGACCCTCGACCCCAGCAGCCTGGACACCA...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGCCCACGCAGGACTGTaGGGCAGAACCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGAHAGL*GRTPGP
Trigger: AGGCCCCGGGGTTCTGCCCCACAGTCCTGCGTGGGC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAGCCCACGCAGGACTGTaGGGCAGAACCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRAHAGL*GRTPGP
Trigger: AGGCCCCGGGGTTCTGCCCCACAGTCCTGCGTGGGC...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGCAGGGTGGGCAACTTTaGGTGGGGGTGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GASWGYLRVARGLRVSCKQGGQL*VGVGRG
Trigger: CCCCCGCCCCACCCCCACCCAAAGTTGCCCACCCTG...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGCCTGCCCCCTAACATaGACCTTGGACATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPACPLT*TLDIPE
Trigger: TTCAGGGATGTCCAAGGTCCATGTTAGGGGGCAGGC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AAGCATGGCTTACGGGGAGGTGGACTGCAGGTGGTGGGGTGCTGGGCAGATGGAGCCTGCAGCTCGGGGTaGGCTTCAGCCTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: KHGLRGGGLQVVGCWADGACSSG*ASAFSR
Trigger: GCGTGAGAAGGCTGAAGCTCACCCCGAGCTGCAGGC...TCCATCTGCCCAGCACCCCACCACCTGCAGTCCACCTCCCCGTAAGCCATGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGGGGGCTCGAAGTTGTaGGTGGGGCCGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRGGSKL*VGPMVP
Trigger: GGGCACCATCGGCCCCACTCACAACTTCGAGCCCCC...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCTAGGTCCCACTTCTTaGTGCCGTTATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLLGPTS*CRYLGS
Trigger: GCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCAGTCACTGCGTCCTCTaGAGGGAGGTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDASHCVL*REVGLA
Trigger: AGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACT...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACGGCTGGAGGTGACATaGTCGCGGGCGGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGARLEVT*SRAAGR
Trigger: TCGGCCTGCCGCCCGCGAGCATGTCACCTCCAGCCG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGACCATGTCAAAGCCAGTaGCCATGGTGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRPCQSQ*PWCTSS
Trigger: GGAAGACGTACACCATGGGCACTGGCTTTGACATGG...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCCTGTGCCCGGCGCTTaGGCTCGGCAATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLPVPGA*ARQCPQ
Trigger: TTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTCACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRHALLL*PALALG
Trigger: GCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTG...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLSRSRS*LALRIT
Trigger: GGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCT...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCGGGGCTCTCAGCCTaGAGCCGCTCCCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSGLSA*SRSRFL
Trigger: GAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCAGATGCGGACGGCATTaGCCGAGGCGGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDARCGRH*PRRRTA
Trigger: TGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCT...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTGGCGAGACACTCGATaGCATCGTAGTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLWRDTR*HRSAGA
Trigger: AGCCCCCGCACTACGATGGCATCGAGTGTCTCGCCA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGGGGCGGGGGTCAGGGTaGCGGGCTGTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQGRGSG*RAVLPI
Trigger: GATGGGGAGGACAGCCCGGCACCCTGACCCCCGCCC...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGGGCGGGGGTCAGGGTaGCGGGCTGTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLGRGSG*RAVLPI
Trigger: GATGGGGAGGACAGCCCGGCACCCTGACCCCCGCCC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAAGAGTCAATGACACTTaGCAGGACAGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRRVNDT*QDSRAG
Trigger: GCCAGCTCTGCTGTCCTGGCAAGTGTCATTGACTCT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATCAGAGGCGGGGGTCTaGGGGCCAATGCCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRSEAGV*GPMPEA
Trigger: TGCCTCGGGCATTGGCCCCCAGACCCCCGCCTCTGA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCCCCTGGCCGGCCATaGCCCTCTGGAGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRPPGRP*PSGARV
Trigger: GACCCTAGCTCCAGAGGGCCATGGCCGGCCAGGGGG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGCATAGGCCAGCACCGTaGCATTATAGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLHRPAP*HYSPRS
Trigger: GCTTCGAGGGCTATAATGCCACGGTGCTGGCCTATG...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCCACCCGCTCAGACATaGGCTTGGCCAGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLPPAQT*AWPGAS
Trigger: TGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGG...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAATTTTGCGGTTCCACTaGCGCACGATGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPILRFH*RTMLET
Trigger: TGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAAT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTGCACGATGGTGGCCTaGCAGTCGGTGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLCTMVA*QSVMPS
Trigger: TGACGGCATCACCGACTGCCAGGCCACCATCGTGCA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATCTCCTCATCTGTGCTaGCGTAGCCATTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRSPHLC*RSHSPA
Trigger: AGCAGGAGAATGGCTACGCCAGCACAGATGAGGAGA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCCCCCTTCTGCTCCCTaGCACCCATCTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPPPSAP*HPSPGA
Trigger: GGCCCCAGGAGATGGGTGCCAGGGAGCAGAAGGGGG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGGTGTCCAGGCTGCTaGGGTCGAGGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSWCPGC*GRGSGG
Trigger: GCCCCCGGACCCTCGACCCCAGCAGCCTGGACACCA...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGAGCTCCTCGGAAGGGTaGGATGGGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLSSSEG*DGARLL
Trigger: CAGCAGCCTGGCCCCATCCCACCCTTCCGAGGAGCT...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTGCCGCGGGCATGGCTaGTGTAAGGCTGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVCRGHG*CKAARH
Trigger: GTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCA...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACCGCTTCAGCCGCTCTaGGCCGGCCAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTPLQPL*AGQVHK
Trigger: TTTGTGGACCTGGCCGGCTCAGAGCGGCTGAAGCGG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCACAGCCCGCAGTGCACTaGTTTGCTGGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVAQPAVH*FAGWSC
Trigger: ACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTG...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCCTTGCCGCCTTACTaGAGCTCTGGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTALPPY*SSGWPP
Trigger: AGGGGGCCAGCCAGAGCTTCAGTAAGGCGGCAAGGC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCCTGCAGCTCGGGGTaGGCTTCAGCCTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRACSSG*ASAFSR
Trigger: GCGTGAGAAGGCTGAAGCTCACCCCGAGCTGCAGGC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCCTGCAGCTCGGGGTaGGCTTCAGCCTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQACSSG*ASAFSR
Trigger: GCGTGAGAAGGCTGAAGCTCACCCCGAGCTGCAGGC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTAGTGGCTGCAGTACTTaGTGGAGACCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPSGCST*WRPRCW
Trigger: CCAACAACGTGGTCTCCATCAAGTACTGCAGCCACT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGCACAGGCATCCCCTaGGATCACCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRGTGIP*DHLARG
Trigger: TCCTCGGGCCAGGTGATCTCAGGGGATGCCTGTGCC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACGCCCTGAGCACTGGTaGTGGCACGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRPEHW*WHGWMW
Trigger: CCACATCCACCCGTGCCATCACCAGTGCTCAGGGCG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGCCAAGGCCTGGTCTaGGCAAGGGCAGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPSQGLV*ARAAPC
Trigger: ACAGGGGGCTGCCCTTGCTCAGACCAGGCCTTGGCT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTCGGCTGGAGGTGACATaGTCGCGGGCGGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRRLEVT*SRAAGR
Trigger: TCGGCCTGCCGCCCGCGAGCATGTCACCTCCAGCCG...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCGGGACAGGGCCCCCTaGTTCAGGCACTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRRDRAP*FRHWIS
Trigger: GCTGATCCAGTGCCTGAAGCAGGGGGCCCTGTCCCG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCGGGACAGGGCCCCCTaGTTCAGGCACTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQRDRAP*FRHWIS
Trigger: GCTGATCCAGTGCCTGAAGCAGGGGGCCCTGTCCCG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGAGGCCCGTGAGAGGCTaGGGCGCAGGGACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRRPVRG*GAGTRS
Trigger: TGAACGAGTCCCTGCGCCGCAGCCTCTCACGGGCCT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPSRSRS*LALRIT
Trigger: GGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGTTAAGCAGCCGGGCGTaGTCTTTCTGGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLLSSRA*SFWAAC
Trigger: GCAGGCCGCCCAGAAAGAGCACGCCCGGCTGCTTAA...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRRSRD*HLSLAA
Trigger: GGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRRRSRD*HLSLAA
Trigger: GGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGTAGTCAATGTTGGCTaGCAGCACCTCGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPVVNVG*QHLDLL
Trigger: GAGGAGATCGAGGTGCTGGCAGCCAACATTGACTAC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCAGTGGGGCCGTCCGTaGACCCTTGGCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISQWGRP*TLGSSN
Trigger: GTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGAGTGGGGCCGATGGTaGCCGTCACACACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQEWGRW*PSHTRP
Trigger: TGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGGGATGGGGCCAGGCTaGTGCACCTCCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAGMGPG*CTSPQG
Trigger: GCCCTGTGGGGAGGTGCAGCAGCCTGGCCCCATCCC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGTGCAAGAACACGCCTTaGAGCTACAGTGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLCKNTP*SYSAVT
Trigger: GGTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCA...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCAACCAGGGGATATGCCTaGTCCCAGCCCAGACCACAT +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVATRGYA*SQPRPH
Trigger: ATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGT...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCGAAAGTCACTGCTCCTaGAGGGCAGGCTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAESHCS*RAGSAH
Trigger: GTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTC...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATCAGAGGCGGGGGTCTaGGGGCCAATGCCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASEAGV*GPMPEA
Trigger: TGCCTCGGGCATTGGCCCCCAGACCCCCGCCTCTGA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCCAAAGCCAGTGCCCATaGTGTACGTCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAQSQCP*CTSSRP
Trigger: GGGCCGGGAAGACGTACACCATGGGCACTGGCTTTG...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGAAGGCCGGGGCGGCTaGAGAAGCACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGEGRGG*RSTQGV
Trigger: TACTCCCTGGGTGCTTCTCCAGCCGCCCCGGCCTTC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCGAAGGCCGGGGCGGCTaGAGAAGCACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISEGRGG*RSTQGV
Trigger: TACTCCCTGGGTGCTTCTCCAGCCGCCCCGGCCTTC...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRHPPWS*QGCPRR
Trigger: CCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQHPPWS*QGCPRR
Trigger: CCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCGGGCGTGCTCTTTCTaGGCGGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRRACSF*AACSFC
Trigger: GCAGAAGCTGCAGGCCGCCCAGAAAGAGCACGCCCG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGACTGGCGCACGATGCTaGAGACAGAGCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRTGARC*RQSGPL
Trigger: CAGGGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTTTCATGGTGAATGACTaGGAGAAGCTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLFMVND*EKLPSE
Trigger: CTCTGAGGGCAGCTTCTCCCAGTCATTCACCATGAA...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCCGTCCGTGCACCCTTaGCTCCTCCAACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGPSVHP*LLQPGR
Trigger: TCTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGG...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGAACACAAGCCCCGAGTaGCTGCAGTACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALNTSPE*LQYLME
Trigger: CTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTT...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTGGCACGGGTGGATGTaGCGGCACAGGCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLWHGWM*RHRHPL
Trigger: CAGGGGATGCCTGTGCCGCCACATCCACCCGTGCCA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGAACAGGATGTCTCCCTaGATGGCGAGACACTCGATG +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALNRMSP*MARHSM
Trigger: CATCGAGTGTCTCGCCATCCAGGGAGACATCCTGTT...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTAACAGGATGTCTCCCTaGATGGCGAGACACTCGATG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPNRMSP*MARHSM
Trigger: CATCGAGTGTCTCGCCATCCAGGGAGACATCCTGTT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGTCAGGGCAGGGTGGTaGCGCGGCCCTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRVRAGW*RGPLWP
Trigger: TGGCCATAAAGGGCCGCGCCACCACCCTGCCCTGAC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCCCCTTCTGCTCCCTaGCACCCATCTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRPPSAP*HPSPGA
Trigger: GGCCCCAGGAGATGGGTGCCAGGGAGCAGAAGGGGG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGGGGGTGCTGGGCAGATaGAGAGGCCTGTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLGVLGR*RGLCTQ
Trigger: CTGAGTGCACAGGCCTCTCCATCTGCCCAGCACCCC...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCAGCTCTTGCAGTaGGCTTGGCTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTGQLLQ*AWLAAP
Trigger: GGGGGCAGCCAGCCAAGCCCACTGCAAGAGCTGACC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCTCGGAAGGGTGGGATaGGGCCAGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLGRVG*GQAAAP
Trigger: AGGTGCAGCAGCCTGGCCCCATCCCACCCTTCCGAG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCGCAGCGGACTCCCTTTaGGATTTCTGGCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLAADSL*DFWPPR
Trigger: TCTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGC...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGGACTCCCCGGCCCAGTaGGGGACTGCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARDSPAQ*GTAGLG
Trigger: CCCCAGCCCTGCAGTCCCCCACTGGGCCGGGGAGTC...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGACTTTCTGTTCAGGTTaGCGGGGAGGAGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WCKAARHGCQAPERRKALTFCSG*RGGVGR
Trigger: TCTTCCCACTCCTCCCCGCCAACCTGAACAGAAAGT...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGCCAGGACAGCAGAGCTaGCCCCGCCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGPGQQS*PRREVA
Trigger: AGCTACCTCACGGCGGGGCCAGCTCTGCTGTCCTGG...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCCGCTGCTCCTTCTTaGGCTGTGCGATCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTAAAPS*AVRSPG
Trigger: ACCGGGAGATCGCACAGCTCAAGAAGGAGCAGCGGC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACAGGACGGGTGCCATTaGCAGTGGGCGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPQDGCH*QWAQDG
Trigger: ACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCAGGACGGGTGCCATTaGCAGTGGGCGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRQDGCH*QWAQDG
Trigger: ACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCCGAGTGGGAGGGGATaGTGGGGGTGTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRPSGRG*WGCESH
Trigger: GTGGGATTCACACCCCCATCATCCCCTCCCACTCGG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCCTGGCCCGAGGACGTaGGAGTCCGAATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRPGPRT*ESECTW
Trigger: CCAAGTGCATTCGGACTCTCACGTCCTCGGGCCAGG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCCTGGCCCGAGGACGTaGGAGTCCGAATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGPGPRT*ESECTW
Trigger: CCAAGTGCATTCGGACTCTCACGTCCTCGGGCCAGG...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCACAGGCATCCCCTaGGATCACCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAGTGIP*DHLARG
Trigger: TCCTCGGGCCAGGTGATCTCAGGGGATGCCTGTGCC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGGCTGGCCGTCTGGGTaGCCGTCAGGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGGWPSG*PSGTSQ
Trigger: CTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGGGGGCTCGAAGTTGTaGGTGGGGCCGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLGGSKL*VGPMVP
Trigger: GGGCACCATCGGCCCCACTCACAACTTCGAGCCCCC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTGTCGGGGACAGGCCTaGGCTGCAGAGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRCRGQA*AAESKE
Trigger: CTCCTTCGACTCTGCAGCTCAGGCCTGTCCCCGACA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCGGCAGGGCAGGGCCCTaGTTCATCTCAGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISGRAGP*FISGVF
Trigger: GAAGACCCCTGAGATGAATCAGGGCCCTGCCCTGCC...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCTCCAACCGGGGAGATaGTGCCCCTCAGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGLQPGR*CPSGPP
Trigger: CGGAGGTCCTGAGGGGCATCATCTCCCCGGTTGGAG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000422435.2
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCTCGGGATGATGCCCTaGTCCTCCTCCGACGTTGCC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLGMMP*SSSDVA
Trigger: GGCAACGTCGGAGGAGGAGCAGGGCATCATCCCGAG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCTCGGGATGATGCCCTaGTCCTCCTCCGACGTTGCC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISLGMMP*SSSDVA
Trigger: GGCAACGTCGGAGGAGGAGCAGGGCATCATCCCGAG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCCGCCAGTGGTGTAGATaGCACCGTTTGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VTGVEDKVEGCRSALAVGRQWCR*HRLRPR
Trigger: ACGAGGACGCAAACGGTGGCATCTACACCACTGGCG...GCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCGGGCTGGGTGCACATaGGCATCTGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLRAGCT*ASGTGG
Trigger: TCCACCTGTGCCAGATGCGCATGTGCACCCAGCCCG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACCAGGTCGGGCTGGGTaGACATGCGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTPGRAG*TCASGT
Trigger: TGTGCCAGATGCGCATGTGCACCCAGCCCGACCTGG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGGTCCTGCTTGGCCCTaGGGATCACCTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRGPAWP*GSPPRH
Trigger: ATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGTCCTGCTTGGCCCTaGGGATCACCTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPGPAWP*GSPPRH
Trigger: ATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSRSRS*LALRIT
Trigger: GGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTTAAGCAGCCGGGCGTaGTCTTTCTGGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGLSSRA*SFWAAC
Trigger: GCAGGCCGCCCAGAAAGAGCACGCCCGGCTGCTTAA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTTAAGCAGCCGGGCGTaGTCTTTCTGGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLSSRA*SFWAAC
Trigger: GCAGGCCGCCCAGAAAGAGCACGCCCGGCTGCTTAA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGSRRRC*SSRICF
Trigger: GAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCCGCTTCCTCCGCAGTaGCTCCTGCAGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRPLPPQ*LLQEEQ
Trigger: CTGTTCCTCCTGCAGGAGGCACTGCGGAGGAAGCGG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCCGCTTCCTCCGCAGTaGCTCCTGCAGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRPLPPQ*LLQEEQ
Trigger: CTGTTCCTCCTGCAGGAGGCACTGCGGAGGAAGCGG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGATGACTGGGAGAAGCTaGCCTCAGAGAACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLMTGRS*PQRTLR
Trigger: TCTCAGAGTTCTCTGAGGGCAGCTTCTCCCAGTCAT...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCAGTGGGGCCGTCCGTaGACCCTTGGCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRQWGRP*TLGSSN
Trigger: GTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGCCATGGAGACACACTaGAGTGGGGCCGTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRAMETH*SGAVRA
Trigger: TGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGATGCGGACGGCATTaGCCGAGGCGGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGRCGRH*PRRRTA
Trigger: TGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAGTCACCACGAGGTCATaGTGGCTGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRVTTRS*WLAVWV
Trigger: CACCCAGACGGCCAGCCAGCATGACCTCGTGGTGAC...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGAAGGCTCCCCCTTCTaGTCCCTGGCACCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTEGSPF*SLAPIS
Trigger: GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAACACAGCCCCCATGCTaGTTCCTACGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPTQPPC*FLRGPR
Trigger: GCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATTCCAACATTTAGGGTaGTTGTGCAGTGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRFQHLG*LCSEWS
Trigger: GCTCCACTCACTGCACAAGCACCCTAAATGTTGGAA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGGACCACATCGGGGGATaGCCCCCAGAGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVDHIGG*PPELRA
Trigger: AGCTCTCAGCTCTGGGGGGCATCCCCCGATGTGGTC...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCTGGAGCTAGGGTCTaGGCGTGGATCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSGARV*AWIRGG
Trigger: CCCGCCTCTGATCCACGCCCAGACCCTAGCTCCAGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATTCTCCTTCGACAGCTaGGGCCGGATCCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPFSFDS*GRILTA
Trigger: GGCCGTCAGGATCCGGCCCCAGCTGTCGAAGGAGAA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTTCTCCTTCGACAGCTaGGGCCGGATCCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISFSFDS*GRILTA
Trigger: GGCCGTCAGGATCCGGCCCCAGCTGTCGAAGGAGAA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTTCCCCAGCAGGACCTaGGGCTCTCCCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQFPSRT*GSPGVT
Trigger: TGTTACCCCGGGAGAGCCCCAGGTCCTGCTGGGGAA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATTCCCCAGCAGGACCTaGGGCTCTCCCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRFPSRT*GSPGVT
Trigger: TGTTACCCCGGGAGAGCCCCAGGTCCTGCTGGGGAA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGCTTGCTCACACAGGTaGAATAGATCTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPACSHR*NRSVLA
Trigger: GGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRMLDLR*RVSGSR
Trigger: CCGTGACCCTGACACCCGCCACCGCAGGTCCAACAT...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCGTTCATCTGGGTGCTaGCTGTGGTGCGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLRSSGC*LWCGTG
Trigger: CCCTGTCCCGCACCACAGCCAGCACCCAGATGAACG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCGATGGCCTCCTGCATaGCTTTCACCCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLRWPPA*LSPAAA
Trigger: TGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTGCCATCGCCGGCCTTaGCTAGCAGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRCHRRP*LAAGWP
Trigger: AGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCTCCAGGTCCTGCTTaGCCCTGCGGATCACCTCCG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGAPGPA*PCGSPP
Trigger: CGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGGCTCCAGGTCCTGCTTaGCCCTGCGGATCACCTCCG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRAPGPA*PCGSPP
Trigger: CGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGC...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVAQTWA*PGASVQ
Trigger: CTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGC...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPAQTWA*PGASVQ
Trigger: CTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCACCCGCTCAGACATaGGCTTGGCCAGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRPPAQT*AWPGAS
Trigger: TGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTGCGTCCAGGAGCAGATaGTTCTGGGAGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLASRSR*FWEEPA
Trigger: GGCAGGCTCCTCCCAGAACCATCTGCTCCTGGACGC...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTGGTGGAGATATCCAGTaGGGGGCCCAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLGGDIQ*GAQALS
Trigger: GCTGAGTGCCTGGGCCCCCCACTGGATATCTCCACC...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGGGCAGAGGATGGGCTTaGTGTGGCCTTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GASWGYLRVARGLRVSCKGRGWA*CGLRPW
Trigger: CCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCC...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTATAGCAACTCATCTGTaGCATCCAGGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPIATHL*HPGRGW
Trigger: CCATCCTCTGCCTGGATGCCACAGATGAGTTGCTAT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGGCACGGGTGGATGTaGCGGCACAGGCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGWHGWM*RHRHPL
Trigger: CAGGGGATGCCTGTGCCGCCACATCCACCCGTGCCA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTGCTGGCTGGCCGTCTaGGTGACCGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVCWLAV*VTVRHI
Trigger: GATGTGCCTGACGGTCACCCAGACGGCCAGCCAGCA...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTGCTGGCTGGCCGTCTaGGTGACCGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQCWLAV*VTVRHI
Trigger: GATGTGCCTGACGGTCACCCAGACGGCCAGCCAGCA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCACCACGAGGTCATGCTaGCTGGCCGTCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPTTRSC*LAVWVT
Trigger: GGTCACCCAGACGGCCAGCCAGCATGACCTCGTGGT...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGACCACGAGGTCATGCTaGCTGGCCGTCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGTTRSC*LAVWVT
Trigger: GGTCACCCAGACGGCCAGCCAGCATGACCTCGTGGT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTGTGAGTGGGGCCGATaGTGCCCGTCACACACTCGC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRCEWGR*CPSHTR
Trigger: GCGAGTGTGTGACGGGCACCATCGGCCCCACTCACA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTGTGAGTGGGGCCGATaGTGCCCGTCACACACTCGC +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRCEWGR*CPSHTR
Trigger: GCGAGTGTGTGACGGGCACCATCGGCCCCACTCACA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTGGCGCGGCCCTTTATaGCCAGGACTCGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRWRGPL*PGLGEE
Trigger: TTCCTCGCCGAGTCCTGGCCATAAAGGGCCGCGCCA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATGGCGCGGCCCTTTATaGCCAGGACTCGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTWRGPL*PGLGEE
Trigger: TTCCTCGCCGAGTCCTGGCCATAAAGGGCCGCGCCA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAGGGTCAGGGCAGGGTaGTGGCGCGGCCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGRVRAG*WRGPLW
Trigger: CCATAAAGGGCCGCGCCACCACCCTGCCCTGACCCT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGGAGGACTTATCTTTTTaGGCTCAGAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLEDLSF*AQRQVQ
Trigger: CTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTC...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTCCCTTTGGGATTTCTaGCCCCCAAGAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLSLWDF*PPRAEG
Trigger: TCCCTCAGCTCTTGGGGGCCAGAAATCCCAAAGGGA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGGACTCCCCGGCCCAGTaGGGGACTGCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKDSPAQ*GTAGLG
Trigger: CCCCAGCCCTGCAGTCCCCCACTGGGCCGGGGAGTC...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGTGCAGTCACCCCAGGTaGGGCATCCCCGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMCSHPR*GIPGPG
Trigger: CCCCGGGCCGGGGATGCCCCACCTGGGGTGACTGCA...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAACATCCCTGAAAGAGTaGGCAGAGAATCCAACTCTC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRTSLKE*AENPTL
Trigger: GAGAGTTGGATTCTCTGCCCACTCTTTCAGGGATGT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGCCTCCAGTCTTAAGATaGGCACAGAAGGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLPPVLR*AQKGKK
Trigger: CTTCTTGCCCTTCTGTGCCCATCTTAAGACTGGAGG...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACGAAGCAGCCCTCGATaGGCTTGCTCACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRSSPR*ACSHRW
Trigger: CCACCTGTGTGAGCAAGCTCATCGAGGGCTGCTTCG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGATGGCGTGGGAGCGTaGGCTCTGCACGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRDGVGA*ALHVHL
Trigger: CAGATGAACGTGCAGAGCTCACGCTCCCACGCCATC...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRGPLRR*SHCPRP
Trigger: TGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACC...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRGPLRR*SHCPRP
Trigger: TGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCA +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLRSASA*FRSHKS
Trigger: TGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRPHTGA*ASATAA
Trigger: AGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRPHTGA*ASATAA
Trigger: AGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCCAGGACGGGTGCCATTaGCAGTGGGCGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSQDGCH*QWAQDG
Trigger: ACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTG...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACCGAGTGGGAGGGGATaGTGGGGGTGTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAPSGRG*WGCESH
Trigger: GTGGGATTCACACCCCCATCATCCCCTCCCACTCGG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACCGAATGCACTTGGCTaGGTCCCGGATGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPPNALG*VPDVPH
Trigger: GTGTGGGACATCCGGGACTCAGCCAAGTGCATTCGG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCCGAATGCACTTGGCTaGGTCCCGGATGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQPNALG*VPDVPH
Trigger: GTGTGGGACATCCGGGACTCAGCCAAGTGCATTCGG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCGCCCTGAGCACTGGTaGTGGCACGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLRPEHW*WHGWMW
Trigger: CCACATCCACCCGTGCCATCACCAGTGCTCAGGGCG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCGTTTTGTCCAGGCCTaGAGGCTCCCCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISRFVQA*RLPLLL
Trigger: GAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCAGACCTTGGACATCCCTaGAAGAGTGGGCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVADLGHP*KSGQRI
Trigger: GATTCTCTGCCCACTCTTTCAGGGATGTCCAAGGTC...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCTCCATGCGCTGCCTTTaGGAGTTCTGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDASMRCL*EFWLLQ
Trigger: CTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGA...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGCGGCTGGAGGTGACATaGTCGCGGGCGGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMRLEVT*SRAAGR
Trigger: TCGGCCTGCCGCCCGCGAGCATGTCACCTCCAGCCG...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCCCCCAAAGAGGTGTaGGATGGCCCTCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPAPKEV*DGPRDD
Trigger: ATCATCCCGAGGGCCATCGCACACCTCTTTGGGGGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCTTGCGCTCGGCAATaGCCCCAAAGAGGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPACARQ*PQRGVR
Trigger: TCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGGCTTGCGCTCGGCAATaGCCCCAAAGAGGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVACARQ*PQRGVR
Trigger: TCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGC...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCGGGACAGGGCCCCCTaGTTCAGGCACTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLRDRAP*FRHWIS
Trigger: GCTGATCCAGTGCCTGAAGCAGGGGGCCCTGTCCCG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCGTGCACCACCTTCTTaGTCTGGTCCCCTAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISRAPPS*SGPLRR
Trigger: GCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACGTGCACCACCTTCTTaGTCTGGTCCCCTAAGGCGC +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRRAPPS*SGPLRR
Trigger: GCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGASMAS*MAFTRS
Trigger: GCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQASMAS*MAFTRS
Trigger: GCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCTCCTGTTGGAGTTTTaGCCTCTTTTTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLLLLEF*PLFEGF
Trigger: GAAGCCTTCAAAAAGAGGGCAAAACTCCAACAGGAG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTGGTGCTTGAGCGTCTaGAACCGCCGCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISWCLSV*NRRWLF
Trigger: GAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRSRILF*SRISFS
Trigger: GGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGATGGTGCTGAGGTTCTaGAGCACACGGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQMVLRF*STRSRS
Trigger: GGAGCGCGACCGTGTGCTGCAGAACCTCAGCACCAT...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSRRRC*SSRICF
Trigger: GAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCTCAGGACCATCTCCTaGTGCCGCTTCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRLRTIS*CRFWDS
Trigger: GGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCTGAG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGTTGGTCTCCTCCAGCTaGACGATGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGLVSSS*TMVAWQ
Trigger: CTGCCAGGCCACCATCGTGCAGCTGGAGGAGACCAA...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCTGCGCATTGGGGATTTaGTGGATGAGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDACALGI*WMSSCW
Trigger: CCAGCAGGAGCTCATCCAGCAAATCCCCAATGCGCA...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLEAVKI*LALVQM
Trigger: CATCTGCACCAATGCCAAGCATATCTTCACAGCCTC...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGGLRVS*KAQPPT
Trigger: TGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCC...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCAGAGTCAATGACACTTaGCAGGACAGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLRVNDT*QDSRAG
Trigger: GCCAGCTCTGCTGTCCTGGCAAGTGTCATTGACTCT...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGTGGGCCTGTCAAGTCTaGCTGCGGGACCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GASWGYLRVARGLRVSCKWACQV*LRDPAI
Trigger: AATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCA...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGTCTGGAGCTAGGGTCTaGGCGTGGATCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSGARV*AWIRGG
Trigger: CCCGCCTCTGATCCACGCCCAGACCCTAGCTCCAGA...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGTTCCCCAGCAGGACCTaGGGCTCTCCCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: RTLQNFTVRSLGWRTKWRFPSRT*GSPGVT
Trigger: TGTTACCCCGGGAGAGCCCCAGGTCCTGCTGGGGAA...CCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGCGTTCATCTGGGTGCTaGCTGTGGTGCGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGRSSGC*LWCGTG
Trigger: CCCTGTCCCGCACCACAGCCAGCACCCAGATGAACG...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCGTGCACATGCGCATCTaGCACAGGTGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAVHMRI*HRWMVK
Trigger: CTTCACCATCCACCTGTGCCAGATGCGCATGTGCAC...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTTCACCAGGTCGGGCTaGGTGCACATGCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLFTRSG*VHMRIW
Trigger: CCAGATGCGCATGTGCACCCAGCCCGACCTGGTGAA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTTCACCAGGTCGGGCTaGGTGCACATGCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRFTRSG*VHMRIW
Trigger: CCAGATGCGCATGTGCACCCAGCCCGACCTGGTGAA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACGATGGCCTCCTGCATaGCTTTCACCCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGARWPPA*LSPAAA
Trigger: TGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCCATCGCCGGCCTTaGCTAGCAGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSCHRRP*LAAGWP
Trigger: AGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCA...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGATCAGCGCACCAATaGCCTCATTGCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTGSAHQ*PHCHRR
Trigger: CCGGCGATGGCAATGAGGCCATTGGTGCGCTGATCC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGCTCCAGGTCCTGCTTaGCCCTGCGGATCACCTCCG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAAPGPA*PCGSPP
Trigger: CGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATCGGCCAGGTCCGCCTaGAAGTTCACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPSARSA*KFTSFS
Trigger: GGAGAAGGAGGTGAACTTCCAGGCGGACCTGGCCGA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCGGCCAGGTCCGCCTaGAAGTTCACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSARSA*KFTSFS
Trigger: GGAGAAGGAGGTGAACTTCCAGGCGGACCTGGCCGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGCGGGCGTGCTCTTTCTaGGCGGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGRACSF*AACSFC
Trigger: GCAGAAGCTGCAGGCCGCCCAGAAAGAGCACGCCCG...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAAQTWA*PGASVQ
Trigger: CTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCCCCAGAGTCCAGCATaGGTGGCTTTAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLPQSPA*VALVLH
Trigger: GTGCAGGACTAAAGCCACCCATGCTGGACTCTGGGG...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTGCACGATGGTGGCCTaGCAGTCGGTGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRCTMVA*QSVMPS
Trigger: TGACGGCATCACCGACTGCCAGGCCACCATCGTGCA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCCCCTGAGATCACCTaGCCCGAGGACGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSPEIT*PEDVRV
Trigger: GACTCTCACGTCCTCGGGCCAGGTGATCTCAGGGGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCCCCTGAGATCACCTaGCCCGAGGACGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSPEIT*PEDVRV
Trigger: GACTCTCACGTCCTCGGGCCAGGTGATCTCAGGGGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPARSCE*GRWCPS
Trigger: TGACGGGCACCATCGGCCCCACTCACAACTTCGAGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTGTCAGGGCAGGGTGGTaGCGCGGCCCTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRVRAGW*RGPLWP
Trigger: TGGCCATAAAGGGCCGCGCCACCACCCTGCCCTGAC...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCTGGCACCCATCTCCTaGGGCCTGTCCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLAPIS*GLSHCS
Trigger: TGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATGTCCCCAGAGCAGCTaGCCCCATCGGCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTCPQSS*PHRPGH
Trigger: GTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCAGCAGGAGACAATGTaGCCACGACTGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLQQETM*PRLPGG
Trigger: CCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCAGCAGGAGACAATGTaGCCACGACTGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPQQETM*PRLPGG
Trigger: CCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTCGGAAGGGTGGGATaGGGCCAGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNALGRVG*GQAAAP
Trigger: AGGTGCAGCAGCCTGGCCCCATCCCACCCTTCCGAG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGACTGTTGGGGCCAGTTaGGGCTATCTGCGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVTVGAS*GYLRVA
Trigger: GGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGGATCCTCCCGGGCCTaGGCCTGTCAAGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLGSSRA*ACQVCL
Trigger: CAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCACCACCTCAAAGGCTTaGGTGTGCCAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPTTSKA*VCQAPP
Trigger: AGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGT...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCGAAGCAGCCCTCGATaGGCTTGCTCACACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRRSSPR*ACSHRW
Trigger: CCACCTGTGTGAGCAAGCTCATCGAGGGCTGCTTCG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGATGGCGTGGGAGCGTaGGCTCTGCACGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGADGVGA*ALHVHL
Trigger: CAGATGAACGTGCAGAGCTCACGCTCCCACGCCATC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGGCACAGGTGGATGGTaGAGATGGCGTGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAGTGGW*RWRGSV
Trigger: CACGCTCCCACGCCATCTTCACCATCCACCTGTGCC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTGGCACAGGTGGATGGTaGAGATGGCGTGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRGTGGW*RWRGSV
Trigger: CACGCTCCCACGCCATCTTCACCATCCACCTGTGCC...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACCAGCAGGCCACAGTTaGTGGAGATGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAPAGHS*WRCPPW
Trigger: CCAAGGAGGGCATCTCCATCAACTGTGGCCTGCTGG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACAGCCCGCAGTGCACTaGTTTGCTGGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPQPAVH*FAGWSC
Trigger: ACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCAGCCCGCAGTGCACTaGTTTGCTGGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRQPAVH*FAGWSC
Trigger: ACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCTAGCCGAGGCCCGTaGGAGGCTGCGGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPSRGP*EAAAQG
Trigger: TCCCTGCGCCGCAGCCTCTCACGGGCCTCGGCTAGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCACTCCATGGTGCTaGGGTTCTGCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSTPWC*GSAAHG
Trigger: ACCGTGTGCTGCAGAACCTCAGCACCATGGAGTGCT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCCTTGCCGCCTTACTaGAGCTCTGGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTALPPY*SSGWPP
Trigger: AGGGGGCCAGCCAGAGCTTCAGTAAGGCGGCAAGGC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCCACTCCGTCCTCTTTaGTCTCAACGAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGPLRPL*SQRGRP
Trigger: TGGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGG...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGGATGATGGGGGTGTaGATCCCACATCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRGMMGV*IPHLWT
Trigger: GGTCCACAGATGTGGGATTCACACCCCCATCATCCC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCGGGATGATGGGGGTGTaGATCCCACATCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISGMMGV*IPHLWT
Trigger: GGTCCACAGATGTGGGATTCACACCCCCATCATCCC...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCCGAGTGGGAGGGGATaGTGGGGGTGTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLPSGRG*WGCESH
Trigger: GTGGGATTCACACCCCCATCATCCCCTCCCACTCGG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGGATGTCCCACACCTTaGTGTAGGAGGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRGCPTP*CRRWTR
Trigger: CCGTGTCCACCTCCTACATCAAGGTGTGGGACATCC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCCTGGCCCGAGGACGTaGGAGTCCGAATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLPGPRT*ESECTW
Trigger: CCAAGTGCATTCGGACTCTCACGTCCTCGGGCCAGG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGGGCTCGAAGTTGTaGGTGGGGCCGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFGGSKL*VGPMVP
Trigger: GGGCACCATCGGCCCCACTCACAACTTCGAGCCCCC...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTGGTGCAGATGGCATTaGTGGGACTGTCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVWCRWH*WDCRGP
Trigger: AGGGCCACGACAGTCCCATCAATGCCATCTGCACCA...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTGGTGCAGATGGCATTaGTGGGACTGTCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLWCRWH*WDCRGP
Trigger: AGGGCCACGACAGTCCCATCAATGCCATCTGCACCA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGAGGAAGGCAGGGGGTaGGTCCAGGGACGTAATTCC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGEEGRG*VQGRNS
Trigger: GGAATTACGTCCCTGGACTCACCCCCTGCCTTCCTC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPVSLAT*GLIFLG
Trigger: GCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAAC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCAACGGAGGAAGGCACTaGGCGTCAGGCGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLNGGRH*ASGGLE
Trigger: CTCTAGGCCGCCTGACGCTCAGTGCCTTCCTCCGTT...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCCCTTCCCAAGGGGCTaGAGGTGGCACTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAPFPRG*RWHSDH
Trigger: GTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCAAGAGATTCCTAGGCTaGATCCAGGGTGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAKRFLG*IQGEAT
Trigger: AGTGGCCTCACCCTGGATTCAGCCTAGGAATCTCTT...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGGGGTCTGGGGGCCAATaGCCGAGGCAGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSGSGGQ*PRQRLR
Trigger: CCGCAGCCGCTGCCTCGGGCATTGGCCCCCAGACCC...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCTCCTCCTCCGACGTTaGCATGTCAAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISLLLRR*HVKASA
Trigger: GGCACTGGCTTTGACATGGCAACGTCGGAGGAGGAG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCGCCAGTGGTGTAGATaGCACCGTTTGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLRQWCR*HRLRPR
Trigger: ACGAGGACGCAAACGGTGGCATCTACACCACTGGCG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACGCCAGTGGTGTAGATaGCACCGTTTGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRQWCR*HRLRPR
Trigger: ACGAGGACGCAAACGGTGGCATCTACACCACTGGCG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTGGGAGCGTGAGCTCTaGACGTTCATCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRWEREL*TFIWVL
Trigger: CAGCACCCAGATGAACGTGCAGAGCTCACGCTCCCA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTGGGAGCGTGAGCTCTaGACGTTCATCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRWEREL*TFIWVL
Trigger: CAGCACCCAGATGAACGTGCAGAGCTCACGCTCCCA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCGGGCTGGGTGCACATaGGCATCTGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQRAGCT*ASGTGG
Trigger: TCCACCTGTGCCAGATGCGCATGTGCACCCAGCCCG...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCCAGGTCGGGCTGGGTaGACATGCGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLPGRAG*TCASGT
Trigger: TGTGCCAGATGCGCATGTGCACCCAGCCCGACCTGG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCACCAATGGCCTCATTaGCATCGCCGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRHQWPH*HRRPWL
Trigger: TAGCCAAGGCCGGCGATGGCAATGAGGCCATTGGTG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAAGGCCCGTGAGAGGCTaGGGCGCAGGGACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTRPVRG*GAGTRS
Trigger: TGAACGAGTCCCTGCGCCGCAGCCTCTCACGGGCCT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPSRILF*SRISFS
Trigger: GGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCTTAAGCAGCCGGGCGTaGTCTTTCTGGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNALSSRA*SFWAAC
Trigger: GCAGGCCGCCCAGAAAGAGCACGCCCGGCTGCTTAA...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLSRRRC*SSRICF
Trigger: GAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCT...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAACTCCTGTCGCCGCTaGTCCTTCTTGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPNSCRR*SFLSCA
Trigger: CGCACAGCTCAAGAAGGAGCAGCGGCGACAGGAGTT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAAACTCCTGTCGCCGCTaGTCCTTCTTGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTNSCRR*SFLSCA
Trigger: CGCACAGCTCAAGAAGGAGCAGCGGCGACAGGAGTT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCAGGACCATCTCCTGCTaGCGCTTCTGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISRTISC*RFWDSR
Trigger: TCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGGACCATCTCCTGCTaGCGCTTCTGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRTISC*RFWDSR
Trigger: TCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCAGGCGCCTCAGTaGAGAAACCTCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAGQAPQ*RNLLGL
Trigger: AAGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGTCCACTGGCGCACGATaGTGGAGACAGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARSTGAR*WRQSGP
Trigger: GGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGTGGA...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTTCGGGGCTCTCAGCCTaGAGCCGCTCCCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFSGLSA*SRSRFL
Trigger: GAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGA...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGTTGGTCTCCTCCAGCTaGACGATGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRLVSSS*TMVAWQ
Trigger: CTGCCAGGCCACCATCGTGCAGCTGGAGGAGACCAA...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATTGGTCTCCTCCAGCTaGACGATGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGALVSSS*TMVAWQ
Trigger: CTGCCAGGCCACCATCGTGCAGCTGGAGGAGACCAA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCCTGCCATATCCGTCTaGCTCAGTCGGCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGPAISV*LSRPSN
Trigger: GTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCTGCCATATCCGTCTaGCTCAGTCGGCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRPAISV*LSRPSN
Trigger: GTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGACGAGAGAAGACATTaGGGTCATTGCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRDERRH*GHCGAE
Trigger: CTCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGACGAGAGAAGACATTaGGGTCATTGCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRDERRH*GHCGAE
Trigger: CTCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACAGTGGGGCCGTCCGTaGACCCTTGGCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTQWGRP*TLGSSN
Trigger: GTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGTGTGGCCAGTCAGCTTaGCGACAGGCTGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: RTLQNFTVRSLGWRTKWRCGQSA*RQAGTC
Trigger: GCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACA...CCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGTGGCCAGTCAGCTTaGCGACAGGCTGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGCGQSA*RQAGTC
Trigger: GCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTGAGTGGGGCCGATGGTaGCCGTCACACACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIEWGRW*PSHTRP
Trigger: TGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTC...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGGCGAGACACTCGATaGCATCGTAGTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGWRDTR*HRSAGA
Trigger: AGCCCCCGCACTACGATGGCATCGAGTGTCTCGCCA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAGLRVS*KAQPPT
Trigger: TGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCGCCTTGCAGCTACAGTaGAGTCACCCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGALQLQ*SHPRWG
Trigger: GCCCCACCTGGGGTGACTGCACTGTAGCTGCAAGGC...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGTGGAGCTGGGGGCCTaGCCCCTAACATGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLVELGA*PLTWTL
Trigger: CAAGGTCCATGTTAGGGGGCAGGCCCCCAGCTCCAC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGTCACTGCAGCCACCTaGTGGTGTCTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RTLQNFTVRSLGWRTKWRVTAAT*WCLPPP
Trigger: TGGTGGAGGGAGACACCAGCAGGTGGCTGCAGTGAC...CCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACTGCAGGGCAGGCTCTaGCCACACAAACACGATGGT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPLQGRL*PHKHDG
Trigger: ACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTCCTCCTGGGAGTaGATGAGGCGAGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSSSWE*MRREVT
Trigger: CGTCACTTCTCGCCTCATCCACTCCCAGGAGGAGCT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAATGGTGAAGATGGCGTaGGAGCGTGAGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPMVKMA*ERELCT
Trigger: CGTGCAGAGCTCACGCTCCCACGCCATCTTCACCAT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCATGGTGAAGATGGCGTaGGAGCGTGAGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISMVKMA*ERELCT
Trigger: CGTGCAGAGCTCACGCTCCCACGCCATCTTCACCAT...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACGCATCTGGCACAGGTaGATGGTGAAGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRRIWHR*MVKMAW
Trigger: CCACGCCATCTTCACCATCCACCTGTGCCAGATGCG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCTGGCTGGTCTTGTCCTaGTTCACTACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLWLVLS*FTTTLF
Trigger: GAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCA...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACG +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASRLAS*LMSWVT
Trigger: CGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGAAGGCCGGGGCGGCTaGAGAAGCACCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGEGRGG*RSTQGV
Trigger: TACTCCCTGGGTGCTTCTCCAGCCGCCCCGGCCTTC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAACATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKHPPWS*QGCPRR
Trigger: CCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATG...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTCGGCCAGGTCCGCCTaGAAGTTCACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSARSA*KFTSFS
Trigger: GGAGAAGGAGGTGAACTTCCAGGCGGACCTGGCCGA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQVCNRR*LFSSSS
Trigger: CGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGAC...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTCCTGCTGCCGCTTCTaGGACTCCAGAGCTCGGATC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSCCRF*DSRARI
Trigger: GATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRTVGAG*SPKKWL
Trigger: CAACCACTTCTTGGGGGACCATCCTGCGCCCACTGT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPTVGAG*SPKKWL
Trigger: CAACCACTTCTTGGGGGACCATCCTGCGCCCACTGT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTGCCTTACTGAAGCTCTaGCTGGCCCCCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLALLKL*LAPFFW
Trigger: CCAGAAGAAGGGGGCCAGCCAGAGCTTCAGTAAGGC...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCCTTACTGAAGCTCTaGCTGGCCCCCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQALLKL*LAPFFW
Trigger: CCAGAAGAAGGGGGCCAGCCAGAGCTTCAGTAAGGC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGCCTTACTGAAGCTCTaGCTGGCCCCCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGALLKL*LAPFFW
Trigger: CCAGAAGAAGGGGGCCAGCCAGAGCTTCAGTAAGGC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGAGTCCAGCTCCTCCTTaGTCTCCTCCAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSPAPP*SPPAAR
Trigger: TCGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACT...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGTCCAGCTCCTCCTTaGTCTCCTCCAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPSPAPP*SPPAAR
Trigger: TCGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCCACGGATGTGTCTGTaGAGTCCAGCTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRPRMCL*SPAPPW
Trigger: CCAAGGAGGAGCTGGACTCCACAGACACATCCGTGG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTCCACGGATGTGTCTGTaGAGTCCAGCTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLPRMCL*SPAPPW
Trigger: CCAAGGAGGAGCTGGACTCCACAGACACATCCGTGG...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTCCGTCCGTGCACCCTTaGCTCCTCCAACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIPSVHP*LLQPGR
Trigger: TCTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGG...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGGAGACACACTGCAGTaGGGCCGTCCGTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLGDTLQ*GRPCTL
Trigger: AAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGAGGATGGGCTTGGTGTaGCCTTCGGCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGRMGLV*PSAMET
Trigger: TGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCT...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCATCCAGGCAGAGGATaGGCTTGGTGTGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGHPGRG*AWCGLR
Trigger: CCGAAGGCCACACCAAGCCCATCCTCTGCCTGGATG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGATGGCACGGGTGGATGTaGCGGCACAGGCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGWHGWM*RHRHPL
Trigger: CAGGGGATGCCTGTGCCGCCACATCCACCCGTGCCA...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLITGPM*PVSLPT
Trigger: TGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGAT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRITGPM*PVSLPT
Trigger: TGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGAT...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACTTGGAAAAGGACGGTaGGTGCAGGAGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPLGKGR*VQEGQA
Trigger: TGCCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCCTTGGAAAAGGACGGTaGGTGCAGGAGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISLGKGR*VQEGQA
Trigger: TGCCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAG...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGGCTGGGAGGCAAGCATaGCTTACGGGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRAGRQA*LTGRWT
Trigger: AGTCCACCTCCCCGTAAGCCATGCTTGCCTCCCAGC...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGACCCCAGGGAACTGTTaGGGCCAGTTGGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRTPGNC*GQLGLS
Trigger: AGATAGCCCCAACTGGCCCCAACAGTTCCCTGGGGT...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCTAGCAGCTCCACCTTaGCCCCATCCAAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPLAAPP*PHPKGT
Trigger: GGTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCGTGAGAAGACACATGTaGTGCCGCGGGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSVRRHM*CRGHGW
Trigger: CCAGCCATGCCCGCGGCACCACATGTGTCTTCTCAC...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCCAGAGAGAGAGAAGCTaGAGAGACTCCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSQRERS*RDSPAQ
Trigger: CTGGGCCGGGGAGTCTCTCCAGCTTCTCTCTCTCTG...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGTGCAGTCACCCCAGGTaGGGCATCCCCGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRCSHPR*GIPGPG
Trigger: CCCCGGGCCGGGGATGCCCCACCTGGGGTGACTGCA...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCTGGACAGAGCCAACGTaGGGGGATCCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCWTEPT*GDPPGP
Trigger: AGGCCCGGGAGGATCCCCCCACGTTGGCTCTGTCCA...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGACCACCTCAAAGGCTTaGGTGTGCCAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGTTSKA*VCQAPP
Trigger: AGGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGT...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGACTGCAGCCACCTGCTaGTGTCTCCCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGTAATC*CLPPPH
Trigger: ATGTGGTGGAGGGAGACACCAGCAGGTGGCTGCAGT...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCGTCCTCGTGGATCTTaGTGTTGGACCTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQRPRGS*CWTCGG
Trigger: GCCACCGCAGGTCCAACATCAAGATCCACGAGGACG...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGATGGCGTGGGAGCGTaGGCTCTGCACGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLDGVGA*ALHVHL
Trigger: CAGATGAACGTGCAGAGCTCACGCTCCCACGCCATC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAACCGCTTCAGCCGCTCTaGGCCGGCCAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKPLQPL*AGQVHK
Trigger: TTTGTGGACCTGGCCGGCTCAGAGCGGCTGAAGCGG...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGCCAGCAGGCCACAGTTaGTGGAGATGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGPAGHS*WRCPPW
Trigger: CCAAGGAGGGCATCTCCATCAACTGTGGCCTGCTGG...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCCAGCAGGCCACAGTTaGTGGAGATGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQPAGHS*WRCPPW
Trigger: CCAAGGAGGGCATCTCCATCAACTGTGGCCTGCTGG...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCATGAAATCTCGGTCTaGGGGGCTCACACAGGCGAT +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRHEISV*GAHTGD
Trigger: ATCGCCTGTGTGAGCCCCTCAGACCGAGATTTCATG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCATGAAATCTCGGTCTaGGGGGCTCACACAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRHEISV*GAHTGD
Trigger: ATCGCCTGTGTGAGCCCCTCAGACCGAGATTTCATG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCTACCACCTTGTTCTTaGTGTTGCGGGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLPPCS*CCGPDW
Trigger: CCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTCTTCCTCCGCTGCCTaGCCTCCTTCTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRSSSAA*PPSSLA
Trigger: GGCTAAAGAAGAAGGAGGTCAGGCAGCGGAGGAAGA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGGCCTTGCCGCCTTACTaGAGCTCTGGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKALPPY*SSGWPP
Trigger: AGGGGGCCAGCCAGAGCTTCAGTAAGGCGGCAAGGC...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGGGATGATGGGGGTGTaGATCCCACATCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGGMMGV*IPHLWT
Trigger: GGTCCACAGATGTGGGATTCACACCCCCATCATCCC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGGCACAGGCATCCCCTaGGATCACCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKGTGIP*DHLARG
Trigger: TCCTCGGGCCAGGTGATCTCAGGGGATGCCTGTGCC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGGGCTGGCCGTCTGGGTaGCCGTCAGGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMGWPSG*PSGTSQ
Trigger: CTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCC...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGGGGGCTCGAAGTTGTaGGTGGGGCCGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGGGSKL*VGPMVP
Trigger: GGGCACCATCGGCCCCACTCACAACTTCGAGCCCCC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGTATCTCGGGAGCCACTaGACAGGATGTCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GASWGYLRVARGLRVSCKYLGSH*TGCLPG
Trigger: TCCAGGGAGACATCCTGTTCAGTGGCTCCCGAGATA...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATATCTCGGGAGCCACTaGACAGGATGTCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPYLGSH*TGCLPG
Trigger: TCCAGGGAGACATCCTGTTCAGTGGCTCCCGAGATA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTATCTCGGGAGCCACTaGACAGGATGTCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRYLGSH*TGCLPG
Trigger: TCCAGGGAGACATCCTGTTCAGTGGCTCCCGAGATA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCTAGGTCCCACTTCTTaGTGCCGTTATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRLGPTS*CRYLGS
Trigger: GCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAG...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCTGGGGATTTGCTGGATaGGCTCCTGCTGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPWGFAG*APAGLG
Trigger: ACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCA...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGTGGGGATTTGCTGGATaGGCTCCTGCTGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGWGFAG*APAGLG
Trigger: ACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCA...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATGGTGCAGATGGCATTaGTGGGACTGTCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAWCRWH*WDCRGP
Trigger: AGGGCCACGACAGTCCCATCAATGCCATCTGCACCA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCAAGTTTAGAGAGTCAATaGCACTTGCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVASLESQ*HLPGQQ
Trigger: CTGCTGTCCTGGCAAGTGTCATTGACTCTCTAAACT...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCCATGCGCTGCCTTTaGGAGTTCTGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSMRCL*EFWLLQ
Trigger: CTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCGTGCACCACCTTCTTaGTCTGGTCCCCTAAGGCGC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLRAPPS*SGPLRR
Trigger: GCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGCGCAGTGCACTGATTTaGTGGCTGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGRSALI*WLVLSW
Trigger: CCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCG...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACGCAGTGCACTGATTTaGTGGCTGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRSALI*WLVLSW
Trigger: CCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACACCAATGGCCTCATTaGCATCGCCGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAHQWPH*HRRPWL
Trigger: TAGCCAAGGCCGGCGATGGCAATGAGGCCATTGGTG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTAGGCCCGTGAGAGGCTaGGGCGCAGGGACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQARPVRG*GAGTRS
Trigger: TGAACGAGTCCCTGCGCCGCAGCCTCTCACGGGCCT...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGGTCCTGCTTGGCCCTaGGGATCACCTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTGPAWP*GSPPRH
Trigger: ATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTGGTGCTTGAGCGTCTaGAACCGCCGCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLWCLSV*NRRWLF
Trigger: GAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGATGGTGCTGAGGTTCTaGAGCACACGGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGMVLRF*STRSRS
Trigger: GGAGCGCGACCGTGTGCTGCAGAACCTCAGCACCAT...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCAACTCCTGTCGCCGCTaGTCCTTCTTGAGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSNSCRR*SFLSCA
Trigger: CGCACAGCTCAAGAAGGAGCAGCGGCGACAGGAGTT...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACTGCCACTTGAGCCTTaGCGCCTTACTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPLPLEP*RLTEAL
Trigger: CAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCTGCCACTTGAGCCTTaGCGCCTTACTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLPLEP*RLTEAL
Trigger: CAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCTGCCACTTGAGCCTTaGCGCCTTACTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLPLEP*RLTEAL
Trigger: CAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCCGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLRRSRD*HLSLAA
Trigger: GGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACG...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCGCTTCCTCCGCAGTaGCTCCTGCAGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLPLPPQ*LLQEEQ
Trigger: CTGTTCCTCCTGCAGGAGGCACTGCGGAGGAAGCGG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCTGGGCTTCCTTTTGTaGCACTTGCAGCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQLGFLL*HLQPLV
Trigger: GACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCCTGCCATATCCGTCTaGCTCAGTCGGCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLPAISV*LSRPSN
Trigger: GTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTCTGTGGCTCGAGATTaGCTAGGGAAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRSVARD*LGKVLP
Trigger: GGGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATCTGTGGCTCGAGATTaGCTAGGGAAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTSVARD*LGKVLP
Trigger: GGGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATCTGTGGCTCGAGATTaGCTAGGGAAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRSVARD*LGKVLP
Trigger: GGGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTAGATGCGGACGGCATTaGCCGAGGCGGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIRCGRH*PRRRTA
Trigger: TGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGTCACCACGAGGTCATaGTGGCTGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTVTTRS*WLAVWV
Trigger: CACCCAGACGGCCAGCCAGCATGACCTCGTGGTGAC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTGCTGGATGAGCTCCTaGTGGTCTAGGTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLCWMSS*WSRSHF
Trigger: GAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTGCTGGATGAGCTCCTaGTGGTCTAGGTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRCWMSS*WSRSHF
Trigger: GAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTGCGCATTGGGGATTTaGTGGATGAGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGCALGI*WMSSCW
Trigger: CCAGCAGGAGCTCATCCAGCAAATCCCCAATGCGCA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTGCGCATTGGGGATTTaGTGGATGAGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISCALGI*WMSSCW
Trigger: CCAGCAGGAGCTCATCCAGCAAATCCCCAATGCGCA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACACACCCAGTCCTTGTaGGCATTGGGGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTHTQSL*ALGICW
Trigger: CCAGCAAATCCCCAATGCGCACAAGGACTGGGTGTG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACAATGTGGCCACGACTaGCAGGAGGGGAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPQCGHD*QEGNKK
Trigger: CTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTGGGCTCAGAGGCAGGTaGAGTGGCTCTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIGLRGR*SGSRGW
Trigger: CCAGCCTCTAGAGCCACTGCACCTGCCTCTGAGCCC...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAACACAGCCCCCATGCTaGTTCCTACGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGTQPPC*FLRGPR
Trigger: GCGTGGGCCACGTAGGAAGCAGCATGGGGGCTGTGT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCTCCTTGATAATTTTCTaGAAGGGAGGGCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: GNNQGICLLPAQTTSGDASLIIF*KGGPAL
Trigger: GAGCGCAGGCCCTCCCTTGCAGAAAATTATCAAGGA...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAGCCTTGCAGCTACAGTaGAGTCACCCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKALQLQ*SHPRWG
Trigger: GCCCCACCTGGGGTGACTGCACTGTAGCTGCAAGGC...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCATTCCAACATTTAGGGTaGTTGTGCAGTGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVAFQHLG*LCSEWS
Trigger: GCTCCACTCACTGCACAAGCACCCTAAATGTTGGAA...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAATCACAACCATTTTGTaGTTCCAACATTTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRITTIL*FQHLGC
Trigger: GCACCCTAAATGTTGGAAGCACAAAATGGTTGTGAT...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGCTGCCTGCGGGACCCTaGCATTGTGCTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGLPAGP*HCAQIT
Trigger: TGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAG...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGCCTGTCAAGTCTGCCTaGGGGACCCTGCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGPVKSA*GTLPLC
Trigger: GCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGTCACTGCAGCCACCTaGTGGTGTCTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLVTAAT*WCLPPP
Trigger: TGGTGGAGGGAGACACCAGCAGGTGGCTGCAGTGAC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATGGGAAGAAAGTCACTaGTCCTGCAGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTWEESH*SCRAGS
Trigger: AGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGCTCCTCCTGGGAGTaGATGAGGCGAGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSSSWE*MRREVT
Trigger: CGTCACTTCTCGCCTCATCCACTCCCAGGAGGAGCT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATGGATCAGCTCCTCCTaGGAGTGGATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRWISSS*EWMRRE
Trigger: TTCTCGCCTCATCCACTCCCAGGAGGAGCTGATCCA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCGCATCTGGCACAGGTaGATGGTGAAGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRRIWHR*MVKMAW
Trigger: CCACGCCATCTTCACCATCCACCTGTGCCAGATGCG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCTTCACCAGGTCGGGCTaGGTGCACATGCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAFTRSG*VHMRIW
Trigger: CCAGATGCGCATGTGCACCCAGCCCGACCTGGTGAA...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTCCTGGCTCATGAGCTaGGTGACGCGGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSWLMS*VTRLLM
Trigger: CATCAACAACCGCGTCACCCAGCTCATGAGCCAGGA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTCCTGGCTCATGAGCTaGGTGACGCGGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRSWLMS*VTRLLM
Trigger: CATCAACAACCGCGTCACCCAGCTCATGAGCCAGGA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATCTCCCGGTTCCTCTTaGTCTCCACTAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSPGSS*SPLAAA
Trigger: GGCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTACTGGCGCACGATGCTaGAGACAGAGCGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQATGARC*RQSGPL
Trigger: CAGGGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGT...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCCACGGATGTGTCTGTaGAGTCCAGCTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGPRMCL*SPAPPW
Trigger: CCAAGGAGGAGCTGGACTCCACAGACACATCCGTGG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCGTCCAGGAGCAGATaGTTCTGGGAGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTASRSR*FWEEPA
Trigger: GGCAGGCTCCTCCCAGAACCATCTGCTCCTGGACGC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTACCACGTTGTTGGGGTaGCCCTTTAGAGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLTTLLG*PFRAAI
Trigger: GATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTGGAGACCACGTTGTTaGGGTGGCCCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRWRPRC*GGPLEL
Trigger: CAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGCTTGCCGACAGGCTaGAACCTGCTAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSLPTG*NLLSSQ
Trigger: CTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAAGCT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACCACGAGGTCATGCTaGCTGGCCGTCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKTTRSC*LAVWVT
Trigger: GGTCACCCAGACGGCCAGCCAGCATGACCTCGTGGT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGGATGTCTCCCTGGATaGCGAGACACTCGATGCCAT +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGGCLPG*RDTRCH
Trigger: ATGGCATCGAGTGTCTCGCCATCCAGGGAGACATCC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCGGATGTCTCCCTGGATaGCGAGACACTCGATGCCAT +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPGCLPG*RDTRCH
Trigger: ATGGCATCGAGTGTCTCGCCATCCAGGGAGACATCC...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGTTGATGGGACTGTCGTaGCCCTTGATCTCACCGATG +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLLMGLS*PLISPM
Trigger: CATCGGTGAGATCAAGGGCCACGACAGTCCCATCAA...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGTCAGGTCACTGGGGTaGAGGACAAAGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RTLQNFTVRSLGWRTKWRVRSLG*RTKWRG
Trigger: ACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGAC...CCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGTGTCCCCAGAGCAGCTaGCCCCATCGGCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQCPQSS*PHRPGH
Trigger: GTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACA...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGTGAGAAGACACATGTaGTGCCGCGGGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAVRRHM*CRGHGW
Trigger: CCAGCCATGCCCGCGGCACCACATGTGTCTTCTCAC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTCAGAGAGAGAGAAGCTaGAGAGACTCCCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRQRERS*RDSPAQ
Trigger: CTGGGCCGGGGAGTCTCTCCAGCTTCTCTCTCTCTG...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTCCAGGACAGCAGAGCTaGCCCCGCCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFPGQQS*PRREVA
Trigger: AGCTACCTCACGGCGGGGCCAGCTCTGCTGTCCTGG...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGGATCCTCCCGGGCCTaGGCCTGTCAAGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKGSSRA*ACQVCL
Trigger: CAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCTAGAAAAGAGTTGGTaGGCAGGGCAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPLEKSW*AGQGPD
Trigger: ATCAGGGCCCTGCCCTGCCCACCAACTCTTTTCTAG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCTTGCTAGAAAAGAGTTaGTGGGCAGGGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPLLEKS*WAGQGP
Trigger: AGGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAA...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTTGCTAGAAAAGAGTTaGTGGGCAGGGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLLEKS*WAGQGP
Trigger: AGGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACCAGCAGGCCACAGTTaGTGGAGATGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTPAGHS*WRCPPW
Trigger: CCAAGGAGGGCATCTCCATCAACTGTGGCCTGCTGG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCTACCACCTTGTTCTTaGTGTTGCGGGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGLPPCS*CCGPDW
Trigger: CCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLPHTGA*ASATAA
Trigger: AGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGGCCGCTGCTCCTTCTTaGGCTGTGCGATCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKAAAPS*AVRSPG
Trigger: ACCGGGAGATCGCACAGCTCAAGAAGGAGCAGCGGC...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGGCCTGCAGCTCGGGGTaGGCTTCAGCCTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQACSSG*ASAFSR
Trigger: GCGTGAGAAGGCTGAAGCTCACCCCGAGCTGCAGGC...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCGCTGCACATTGTAGATaGGGGCCTGCAGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCAAHCR*GPAARG
Trigger: ACCCCGAGCTGCAGGCCCTCATCTACAATGTGCAGC...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATGGAGCCTTTCATGGTaGATGACTGGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPWSLSW*MTGRSC
Trigger: GCAGCTTCTCCCAGTCATTCACCATGAAAGGCTCCA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp AAGCATGGCTTACGGGGAGGTGGACTGCAGGTGGTGGGGTGCTGGGCAGATGGAAGGCCAGGGACTTGGTaGTGTTCTTGGTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: KHGLRGGGLQVVGCWADGRPGTW*CSWWRY
Trigger: ATATCTCCACCAAGAACATCACCAAGTCCCTGGCCT...TCCATCTGCCCAGCACCCCACCACCTGCAGTCCACCTCCCCGTAAGCCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCCCACTCCGTCCTCTTTaGTCTCAACGAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLPLRPL*SQRGRP
Trigger: TGGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGG...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGGCTGACCCCTGGCTCTaGTTACTGGTGAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGADPWL*LLVRRE
Trigger: CTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGC...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGGATGTCCCACACCTTaGTGTAGGAGGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLGCPTP*CRRWTR
Trigger: CCGTGTCCACCTCCTACATCAAGGTGTGGGACATCC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGGCACAGGCATCCCCTaGGATCACCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFGTGIP*DHLARG
Trigger: TCCTCGGGCCAGGTGATCTCAGGGGATGCCTGTGCC...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGCGCCCTGAGCACTGGTaGTGGCACGGGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQRPEHW*WHGWMW
Trigger: CCACATCCACCCGTGCCATCACCAGTGCTCAGGGCG...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTTGTCGGGGACAGGCCTaGGCTGCAGAGTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLCRGQA*AAESKE
Trigger: CTCCTTCGACTCTGCAGCTCAGGCCTGTCCCCGACA...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAAGAGATTCCTAGGCTaGATCCAGGGTGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPKRFLG*IQGEAT
Trigger: AGTGGCCTCACCCTGGATTCAGCCTAGGAATCTCTT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAACCACATCAGGCACATaGGAAAGTCCCCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTTTSGT*ESPRNL
Trigger: AAGGTTGCGGGGACTTTCTCATGTGCCTGATGTGGT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAACACAAACACGATGGTaGACAGACCAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTTQTRW*TDQAQA
Trigger: TGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGGTCACTGGAGGCTGTaGAGATATGCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGGHWRL*RYAWHW
Trigger: CCAATGCCAAGCATATCTTCACAGCCTCCAGTGACC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAGACTTGTCCAGCGCTaGCCCCTGGCTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGRLVQR*PLALIT
Trigger: AGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGTCT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422435.2
CDS-3UTR GCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCCTCCTCCTCCGACGTTaGCATGTCAAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLLLLRR*HVKASA
Trigger: GGCACTGGCTTTGACATGGCAACGTCGGAGGAGGAG...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTCCTGTGCCCGGCGCTTaGGCTCGGCAATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCPVPGA*ARQCPQ
Trigger: TTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGG...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCGCCAGTGGTGTAGATaGCACCGTTTGCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNARQWCR*HRLRPR
Trigger: ACGAGGACGCAAACGGTGGCATCTACACCACTGGCG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCGGGACAGGGCCCCCTaGTTCAGGCACTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGRDRAP*FRHWIS
Trigger: GCTGATCCAGTGCCTGAAGCAGGGGGCCCTGTCCCG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGCCAGGTCGGGCTGGGTaGACATGCGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKPGRAG*TCASGT
Trigger: TGTGCCAGATGCGCATGTGCACCCAGCCCGACCTGG...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCGCAGTGCACTGATTTaGTGGCTGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGRSALI*WLVLSW
Trigger: CCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAATCTCAGCCCGCAGTaGACTGATTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPNLSPQ*TDLLAG
Trigger: ACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCAATCTCAGCCCGCAGTaGACTGATTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISNLSPQ*TDLLAG
Trigger: ACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATT...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSISSI*SRAISA
Trigger: GGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLASMAS*MAFTRS
Trigger: GCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGC...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCCCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLPLLIV*LDLVGL
Trigger: AAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGG...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCTCCTTCTTGAGCTGTaGGATCTCCCGGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLLLEL*DLPVPL
Trigger: AAGAGGAACCGGGAGATCGCACAGCTCAAGAAGGAG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAGGACCATCTCCTGCTaGCGCTTCTGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLRTISC*RFWDSR
Trigger: TCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATCTCAGGACCATCTCCTaGTGCCGCTTCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNLRTIS*CRFWDS
Trigger: GGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCTGAG...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGGCCAGGCGCCTCAGTaGAGAAACCTCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTGQAPQ*RNLLGL
Trigger: AAGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTCCACTGGCGCACGATaGTGGAGACAGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGSTGAR*WRQSGP
Trigger: GGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGTGGA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAACCGCTTCCTCCGCAGTaGCTCCTGCAGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKPLPPQ*LLQEEQ
Trigger: CTGTTCCTCCTGCAGGAGGCACTGCGGAGGAAGCGG...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATCGGGGCTCTCAGCCTaGAGCCGCTCCCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSSGLSA*SRSRFL
Trigger: GAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTGACGAGAGAAGACATTaGGGTCATTGCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRDERRH*GHCGAE
Trigger: CTCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTC...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCAGTGGGGCCGTCCGTaGACCCTTGGCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGQWGRP*TLGSSN
Trigger: GTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTAGGGGGTCTCCTTCCTaGTATCAGCTGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRRGSPS*YQLPQT
Trigger: AGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCT...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGAGGGGGTCTCCTTCCTaGTATCAGCTGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQRGSPS*YQLPQT
Trigger: AGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTCAAAGGCTTGGGTGTaGCAGGCTCCGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGSKAWV*QAPPVN
Trigger: ATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGACCAGGGGATATGCCTaGTCCCAGCCCAGACCACAT +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQTRGYA*SQPRPH
Trigger: ATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCTTCTCCTTCGACAGCTaGGGCCGGATCCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLFSFDS*GRILTA
Trigger: GGCCGTCAGGATCCGGCCCCAGCTGTCGAAGGAGAA...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCATAGGCCAGCACCGTaGCATTATAGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGHRPAP*HYSPRS
Trigger: GCTTCGAGGGCTATAATGCCACGGTGCTGGCCTATG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGACAAAGCCAGTGCCCATaGTGTACGTCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGQSQCP*CTSSRP
Trigger: GGGCCGGGAAGACGTACACCATGGGCACTGGCTTTG...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACAAAGCCAGTGCCCATaGTGTACGTCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTQSQCP*CTSSRP
Trigger: GGGCCGGGAAGACGTACACCATGGGCACTGGCTTTG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCCGTTTGCGTCCTCGTaGATCTTGATGTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRPFASS*ILMLDL
Trigger: CAGGTCCAACATCAAGATCCACGAGGACGCAAACGG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGGATCAGCTCCTCCTaGGAGTGGATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGWISSS*EWMRRE
Trigger: TTCTCGCCTCATCCACTCCCAGGAGGAGCTGATCCA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGATGGTGAAGATGGCGTaGGAGCGTGAGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLMVKMA*ERELCT
Trigger: CGTGCAGAGCTCACGCTCCCACGCCATCTTCACCAT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCGCATCTGGCACAGGTaGATGGTGAAGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLRIWHR*MVKMAW
Trigger: CCACGCCATCTTCACCATCCACCTGTGCCAGATGCG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGTGCACATGCGCATCTaGCACAGGTGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGVHMRI*HRWMVK
Trigger: CTTCACCATCCACCTGTGCCAGATGCGCATGTGCAC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTCGATGGCCTCCTGCATaGCTTTCACCCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFRWPPA*LSPAAA
Trigger: TGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCG...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGHPPWS*QGCPRR
Trigger: CCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCGAGGCATCCTCCATaGAGCTGGCAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPRHPP*SWQGCP
Trigger: GGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGCTCCAGGTCCTGCTTaGCCCTGCGGATCACCTCCG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGAPGPA*PCGSPP
Trigger: CGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTCATCAGGGCCACCTTaGCCTTCTTCATCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSSGPP*PSSSQP
Trigger: TGGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTCATCAGGGCCACCTTaGCCTTCTTCATCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGSSGPP*PSSSQP
Trigger: TGGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCCACCCGCTCAGACATaGGCTTGGCCAGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGPPAQT*AWPGAS
Trigger: TGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCTGCACGATGGTGGCCTaGCAGTCGGTGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCCTMVA*QSVMPS
Trigger: TGACGGCATCACCGACTGCCAGGCCACCATCGTGCA...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAGTCCAGCTCCTCCTTaGTCTCCTCCAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSPAPP*SPPAAR
Trigger: TCGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTSNSRI*ASFCAT
Trigger: AGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTCTCCTCATCTGTGCTaGCGTAGCCATTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQSPHLC*RSHSPA
Trigger: AGCAGGAGAATGGCTACGCCAGCACAGATGAGGAGA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTGGAGACACACTGCAGTaGGGCCGTCCGTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLGDTLQ*GRPCTL
Trigger: AAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCC...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACATCCAGGCAGAGGATaGGCTTGGTGTGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTHPGRG*AWCGLR
Trigger: CCGAAGGCCACACCAAGCCCATCCTCTGCCTGGATG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGACCACGTTGTTGGGGTaGCCCTTTAGAGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRTTLLG*PFRAAI
Trigger: GATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTTCCCCTGAGATCACCTaGCCCGAGGACGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLSPEIT*PEDVRV
Trigger: GACTCTCACGTCCTCGGGCCAGGTGATCTCAGGGGA...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAGCTTGCCGACAGGCTaGAACCTGCTAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSLPTG*NLLSSQ
Trigger: CTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAAGCT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAACAGGATGTCTCCCTaGATGGCGAGACACTCGATG +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPNRMSP*MARHSM
Trigger: CATCGAGTGTCTCGCCATCCAGGGAGACATCCTGTT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTTGATGGGACTGTCGTaGCCCTTGATCTCACCGATG +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQLMGLS*PLISPM
Trigger: CATCGGTGAGATCAAGGGCCACGACAGTCCCATCAA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTTGGCTTACGGGGAGGTaGACTGCAGGTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQAWLTGR*TAGGGV
Trigger: CACCCCACCACCTGCAGTCCACCTCCCCGTAAGCCA...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTCTCCCCAAATGTGGTTaGGGCTGGGAGGCAAGCATG +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRLPKCG*GWEASM
Trigger: CATGCTTGCCTCCCAGCCCCAACCACATTTGGGGAG...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTGGTGTCCAGGCTGCTaGGGTCGAGGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSWCPGC*GRGSGG
Trigger: GCCCCCGGACCCTCGACCCCAGCAGCCTGGACACCA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTGCCGCGGGCATGGCTaGTGTAAGGCTGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCCRGHG*CKAARH
Trigger: GTGCCGGGCAGCCTTACACCAGCCATGCCCGCGGCA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCATGCTGCTTCCTACGTaGCCCACGCAGGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCMLLPT*PTQDCG
Trigger: CCCACAGTCCTGCGTGGGCCACGTAGGAAGCAGCAT...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGACTCGGGGTGTCTCATaGATGTTGGGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQTRGVS*MLGSGL
Trigger: GAGCCCTGAGCCCAACATCCATGAGACACCCCGAGT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCCTGCCCCCTAACATaGACCTTGGACATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGACPLT*TLDIPE
Trigger: TTCAGGGATGTCCAAGGTCCATGTTAGGGGGCAGGC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTGCTTGTGCAGTGAGTaGAGCTGGGGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGCLCSE*SWGPAP
Trigger: GGGGGCAGGCCCCCAGCTCCACTCACTGCACAAGCA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGCATGGCGTAAAGATGTaGCTGGGCCTGACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGHGVKM*LGLTRL
Trigger: GAGCCTTGTCAGGCCCAGCCACATCTTTACGCCATG...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGGTGAGGACAGGGCCCTaGCACAGGACTATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGVRTGP*HRTMLK
Trigger: CTTCAGCATAGTCCTGTGCCAGGGCCCTGTCCTCAC...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGGACAGGCAGCAGGGCTaGACAGCTGAGGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARDRQQG*TAEGEE
Trigger: CTCTTCACCCTCAGCTGTCCAGCCCTGCTGCCTGTC...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCACATGAGTGCTGGGGATaGGGCAGGGGACAGAACAAA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAHECWG*GRGQNK
Trigger: TTTGTTCTGTCCCCTGCCCCATCCCCAGCACTCATG...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CGGACACTCCAGAACTTCACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGCTAGAAAAGAGTTGGTaGGCAGGGCAGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RTLQNFTVRSLGWRTKWRLEKSW*AGQGPD
Trigger: ATCAGGGCCCTGCCCTGCCCACCAACTCTTTTCTAG...CCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGAAGTTCTGGAGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCGCTTCAGCCGCTCTaGGCCGGCCAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPLQPL*AGQVHK
Trigger: TTTGTGGACCTGGCCGGCTCAGAGCGGCTGAAGCGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGCCGCTTCAGCCGCTCTaGGCCGGCCAGGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRPLQPL*AGQVHK
Trigger: TTTGTGGACCTGGCCGGCTCAGAGCGGCTGAAGCGG...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCATGAAATCTCGGTCTaGGGGGCTCACACAGGCGAT +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLHEISV*GAHTGD
Trigger: ATCGCCTGTGTGAGCCCCTCAGACCGAGATTTCATG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCTACCACCTTGTTCTTaGTGTTGCGGGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLPPCS*CCGPDW
Trigger: CCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCCAGCCCGCAGTGCACTaGTTTGCTGGCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCQPAVH*FAGWSC
Trigger: ACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTG...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCTAGCCGAGGCCCGTaGGAGGCTGCGGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPSRGP*EAAAQG
Trigger: TCCCTGCGCCGCAGCCTCTCACGGGCCTCGGCTAGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTTCTTCCTCCGCTGCCTaGCCTCCTTCTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: QSKLFRLTRARTQPELRRSSSAA*PPSSLA
Trigger: GGCTAAAGAAGAAGGAGGTCAGGCAGCGGAGGAAGA...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTCTTCCTCCGCTGCCTaGCCTCCTTCTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSSSAA*PPSSLA
Trigger: GGCTAAAGAAGAAGGAGGTCAGGCAGCGGAGGAAGA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGCCGCTGCTCCTTCTTaGGCTGTGCGATCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGAAAPS*AVRSPG
Trigger: ACCGGGAGATCGCACAGCTCAAGAAGGAGCAGCGGC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGGAGCCTTTCATGGTaGATGACTGGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGWSLSW*MTGRSC
Trigger: GCAGCTTCTCCCAGTCATTCACCATGAAAGGCTCCA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAAGGCCAGGGACTTGGTaGTGTTCTTGGTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRPGTW*CSWWRY
Trigger: ATATCTCCACCAAGAACATCACCAAGTCCCTGGCCT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCCCACTCCGTCCTCTTTaGTCTCAACGAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCPLRPL*SQRGRP
Trigger: TGGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGG...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATGGGATGATGGGGGTGTaGATCCCACATCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNGMMGV*IPHLWT
Trigger: GGTCCACAGATGTGGGATTCACACCCCCATCATCCC...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLGSDYW*DERRHC
Trigger: GCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCC...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAGTGGCTGCAGTACTTaGTGGAGACCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSGCST*WRPRCW
Trigger: CCAACAACGTGGTCTCCATCAAGTACTGCAGCCACT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATGGATGTCCCACACCTTaGTGTAGGAGGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNGCPTP*CRRWTR
Trigger: CCGTGTCCACCTCCTACATCAAGGTGTGGGACATCC...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGGATGTCCCACACCTTaGTGTAGGAGGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGGCPTP*CRRWTR
Trigger: CCGTGTCCACCTCCTACATCAAGGTGTGGGACATCC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAATGGTGCAGATGGCATTaGTGGGACTGTCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKWCRWH*WDCRGP
Trigger: AGGGCCACGACAGTCCCATCAATGCCATCTGCACCA...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGAGTCACTGGAGGCTGTaGAGATATGCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRSHWRL*RYAWHW
Trigger: CCAATGCCAAGCATATCTTCACAGCCTCCAGTGACT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGGAGGAAGGCAGGGGGTaGGTCCAGGGACGTAATTCC +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMEEGRG*VQGRNS
Trigger: GGAATTACGTCCCTGGACTCACCCCCTGCCTTCCTC...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGTGGGCTCAGGGCTCCTaGAGGACTTCAAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGWAQGS*RTSSLE
Trigger: CTCTAAACTTGAAGTCCTTCAGGAGCCCTGAGCCCA...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAGCACAAAGTGGGGCTTaGCCCAGGAGACTGGGAATC +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKAQSGA*PRRLGI
Trigger: GATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGC...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGGGTCTGGGGGCCAATaGCCGAGGCAGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKGSGGQ*PRQRLR
Trigger: CCGCAGCCGCTGCCTCGGGCATTGGCCCCCAGACCC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCCATGTCAAAGCCAGTaGCCATGGTGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRPCQSQ*PWCTSS
Trigger: GGAAGACGTACACCATGGGCACTGGCTTTGACATGG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKHALLL*PALALG
Trigger: GCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACC +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRSRSRS*LALRIT
Trigger: GGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCT...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGCTCAGGACCATCTCCTaGTGCCGCTTCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKLRTIS*CRFWDS
Trigger: GGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCTGAG...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCTGCCACTTGAGCCTTaGCGCCTTACTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLPLEP*RLTEAL
Trigger: CAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGGTAGTCAATGTTGGCTaGCAGCACCTCGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRVVNVG*QHLDLL
Trigger: GAGGAGATCGAGGTGCTGGCAGCCAACATTGACTAC...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCTGGGCTTCCTTTTGTaGCACTTGCAGCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLGFLL*HLQPLV
Trigger: GACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTCCTGCCATATCCGTCTaGCTCAGTCGGCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFPAISV*LSRPSN
Trigger: GTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGG...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTGTTCTGGGAGGAGCCTaGCATATCCGTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIVLGGA*HIRLPQ
Trigger: CTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAAC...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGATCTCCTCATCTGTaGTGGCGTAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRSPHL*WRSHSP
Trigger: AGGAGAATGGCTACGCCAGCACAGATGAGGAGATCT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGAGATCTCCTCATCTGTaGTGGCGTAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQRSPHL*WRSHSP
Trigger: AGGAGAATGGCTACGCCAGCACAGATGAGGAGATCT...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGATGACTGGGAGAAGCTaGCCTCAGAGAACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRMTGRS*PQRTLR
Trigger: TCTCAGAGTTCTCTGAGGGCAGCTTCTCCCAGTCAT...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGGCCATGGAGACACACTaGAGTGGGGCCGTCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQAMETH*SGAVRA
Trigger: TGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGC...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCCAAGTTCCACATCTTaGAGCTTCGGTCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: QPGQDMIARKELVGRAGPPSSTS*SFGLWT
Trigger: GGTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACCAAGTTCCACATCTTaGAGCTTCGGTCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTPSSTS*SFGLWT
Trigger: GGTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGGCGAGACACTCGATaGCATCGTAGTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWWRDTR*HRSAGA
Trigger: AGCCCCCGCACTACGATGGCATCGAGTGTCTCGCCA...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGCTGTCCCACTGTTCATaGTTGGAAAAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRLSHCS*LEKDGG
Trigger: CCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAG...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCAATGTGGCCACGACTaGCAGGAGGGGAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLQCGHD*QEGNKK
Trigger: CTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTCAGACACAGCCCCCATaGTGCTTCCTACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLQTQPP*CFLRGP
Trigger: TGGGCCACGTAGGAAGCAGCATGGGGGCTGTGTCTG...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAACCTGTCAAGTCTGCCTaGGGGACCCTGCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKPVKSA*GTLPLC
Trigger: GCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATTTGAGAGTTCTGGCTaGTTCAGAAGAGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRFESSG*FRRVRH
Trigger: GTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTTTTGTGCTTTAAACTaGCCTCTGCCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRFCALN*PLPRPH
Trigger: GTGTGGCCTGGGCAGAGGGCAGTTTAAAGCACAAAA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGCTGCAGGGCAGGCTCTaGCCACACAAACACGATGGT +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARLQGRL*PHKHDG
Trigger: ACCATCGTGTTTGTGTGGGCAGAGCCTGCCCTGCAG...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGAAAGTCACTGCTCCTaGAGGGCAGGCTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLESHCS*RAGSAH
Trigger: GTGGGCAGAGCCTGCCCTGCAGGAGCAGTGACTTTC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGCTGACCAGGAGGCTATaGCAAGCAAGGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGLTRRL*QARRAA
Trigger: TGCTGCTCTCCTTGCTTGGCATAGCCTCCTGGTCAG...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGACCAGGAGGCTATaGCAAGCAAGGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQLTRRL*QARRAA
Trigger: TGCTGCTCTCCTTGCTTGGCATAGCCTCCTGGTCAG...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCATAGGCCAGCACCGTaGCATTATAGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAHRPAP*HYSPRS
Trigger: GCTTCGAGGGCTATAATGCCACGGTGCTGGCCTATG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAACGCATCTGGCACAGGTaGATGGTGAAGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKRIWHR*MVKMAW
Trigger: CCACGCCATCTTCACCATCCACCTGTGCCAGATGCG...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTTTCACCAGGTCGGGCTaGGTGCACATGCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLFTRSG*VHMRIW
Trigger: CCAGATGCGCATGTGCACCCAGCCCGACCTGGTGAA...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTGGCTGGTCTTGTCCTaGTTCACTACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGWLVLS*FTTTLF
Trigger: GAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTGGCTGGTCTTGTCCTaGTTCACTACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISWLVLS*FTTTLF
Trigger: GAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTCGATGGCCTCCTGCATaGCTTTCACCCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFRWPPA*LSPAAA
Trigger: TGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCG...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACG +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLSRLAS*LMSWVT
Trigger: CGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCT...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACG +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKSRLAS*LMSWVT
Trigger: CGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCT...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGGGATCAGCGCACCAATaGCCTCATTGCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMGSAHQ*PHCHRR
Trigger: CCGGCGATGGCAATGAGGCCATTGGTGCGCTGATCC...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATCATCAGGGCCACCTTaGCCTTCTTCATCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASSGPP*PSSSQP
Trigger: TGGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGTGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGWSPKK*LILRFH
Trigger: GTGGAACCGCAAAATCAACCACTTCTTGGGGGACCA...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGSAGDNVATTARRGTRRWSPKK*LILRFH
Trigger: GTGGAACCGCAAAATCAACCACTTCTTGGGGGACCA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCTGGCCCCCTTCTTCTaGAACTTCTTTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLAPFF*NFFRAG
Trigger: TCCTGCCCGAAAGAAGTTCCAGAAGAAGGGGGCCAG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTCCACGGATGTGTCTGTaGAGTCCAGCTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIPRMCL*SPAPPW
Trigger: CCAAGGAGGAGCTGGACTCCACAGACACATCCGTGG...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGAGGAGCAGATGGTTCTaGGAGGAGCCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: APRLKREAQDQRCNGKTGRSRWF*EEPAIS
Trigger: GGATATGGCAGGCTCCTCCCAGAACCATCTGCTCCT...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGACACAGCTTTCATTTaGGCAGACAGTTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQDTAFI*ADSLGS
Trigger: CGAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACAGCTTTCATTTaGGCAGACAGTTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRDTAFI*ADSLGS
Trigger: CGAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTC...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGGACACAGCTTTCATTTaGGCAGACAGTTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGDTAFI*ADSLGS
Trigger: CGAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTC...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGGTGGAGATATCCAGTaGGGGGCCCAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGGGDIQ*GAQALS
Trigger: GCTGAGTGCCTGGGCCCCCCACTGGATATCTCCACC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGGCAGAGGATGGGCTTaGTGTGGCCTTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGGRGWA*CGLRPW
Trigger: CCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGCATCCAGGCAGAGGATaGGCTTGGTGTGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKHPGRG*AWCGLR
Trigger: CCGAAGGCCACACCAAGCCCATCCTCTGCCTGGATG...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCTGGAGACCACGTTGTTaGGGTGGCCCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAWRPRC*GGPLEL
Trigger: CAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCA...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTAGCTTGCCGACAGGCTaGAACCTGCTAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CKGGPALHASFKAENVSPSLPTG*NLLSSQ
Trigger: CTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAAGCT...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTITGPM*PVSLPT
Trigger: TGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGAT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACA +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKITGPM*PVSLPT
Trigger: TGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGAT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMARSCE*GRWCPS
Trigger: TGACGGGCACCATCGGCCCCACTCACAACTTCGAGC...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCGCATTGGGGATTTGCTaGATGAGCTCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TVGASWGYLRVARGLRVSALGIC*MSSCWS
Trigger: AGACCAGCAGGAGCTCATCCAGCAAATCCCCAATGC...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGCAGCTCAGATCGAAGTaGGGAAAGAGAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRQLRSK*GKRGKR
Trigger: CCTTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTG...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCCTGGCACCCATCTCCTaGGGCCTGTCCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLLAPIS*GLSHCS
Trigger: TGAACAGTGGGACAGGCCCCAGGAGATGGGTGCCAG...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGAGGACTTATCTTTTTaGGCTCAGAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGEDLSF*AQRQVQ
Trigger: CTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTCCCTTTGGGATTTCTaGCCCCCAAGAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSLWDF*PPRAEG
Trigger: TCCCTCAGCTCTTGGGGGCCAGAAATCCCAAAGGGA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCACACTGGGCGCCACATaGAGAGGGCTCCAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGTLGAT*RGLQVP
Trigger: GGGCACTTGGAGCCCTCTCCATGTGGCGCCCAGTGT...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATACTCGGGGTGTCTCATaGATGTTGGGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNTRGVS*MLGSGL
Trigger: GAGCCCTGAGCCCAACATCCATGAGACACCCCGAGT...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCGACAGGCAGCAGGGCTaGACAGCTGAGGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLDRQQG*TAEGEE
Trigger: CTCTTCACCCTCAGCTGTCCAGCCCTGCTGCCTGTC...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTACTGCAGCCACCTGCTaGTGTCTCCCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTITAATC*CLPPPH
Trigger: ATGTGGTGGAGGGAGACACCAGCAGGTGGCTGCAGT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAGTTGCCTGTTTGGGATaGCAAAGGGACACATACCAC +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRVACLG*QRDTYH
Trigger: GTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAAC...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp AGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTaGCAGCTACAGTGCAGTCACCCCAGGTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RAIRSHFVQEHA*QLQCSHPRWGI
Trigger: GATGCCCCACCTGGGGTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTAGCACTCCATGGTGCTaGGGTTCTGCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLSTPWC*GSAAHG
Trigger: ACCGTGTGCTGCAGAACCTCAGCACCATGGAGTGCT...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAACCCCCAAGAAGTGGTTaGTTTTGCGGTTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKPPRSG*FCGSTG
Trigger: GCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGG...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCCCCAAGAAGTGGTTaGTTTTGCGGTTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLPPRSG*FCGSTG
Trigger: GCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGCTGCACATTGTAGATaGGGGCCTGCAGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGAAHCR*GPAARG
Trigger: ACCCCGAGCTGCAGGCCCTCATCTACAATGTGCAGC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTGCTGACCCCTGGCTCTaGTTACTGGTGAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQAADPWL*LLVRRE
Trigger: CTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGC...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCAGTGGCTGCAGTACTTaGTGGAGACCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLSGCST*WRPRCW
Trigger: CCAACAACGTGGTCTCCATCAAGTACTGCAGCCACT...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTATCTCGGGAGCCACTaGACAGGATGTCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIYLGSH*TGCLPG
Trigger: TCCAGGGAGACATCCTGTTCAGTGGCTCCCGAGATA...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAACAAGACCTCGCGAGTaGGAAGACACATGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGTRPRE*EDTCGA
Trigger: GGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCGGGGCGCCAGAACACTaGTTTAACAATTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGGAPEH*FNNFPG
Trigger: TCCGGGGAAATTGTTAAATCAGTGTTCTGGCGCCCC...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGTCTTGGCTCCCAGACTaGAGCGGGAAGCACAAGACC +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMSWLPD*SGKHKT
Trigger: GGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGA...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAATCTTGGCTCCCAGACTaGAGCGGGAAGCACAAGACC +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKSWLPD*SGKHKT
Trigger: GGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGA...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGACCTTGGACATCCCTaGAAGAGTGGGCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNADLGHP*KSGQRI
Trigger: GATTCTCTGCCCACTCTTTCAGGGATGTCCAAGGTC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGTGGGGCATTGGCCACTaGCCAGGAGGCTATGCCAAG +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQWGIGH*PGGYAK
Trigger: CTTGGCATAGCCTCCTGGTCAGTGGCCAATGCCCCA...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGGGCAGGGCAGGGCCCTaGTTCATCTCAGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRGRAGP*FISGVF
Trigger: GAAGACCCCTGAGATGAATCAGGGCCCTGCCCTGCC...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTAGACTTGTCCAGCGCTaGCCCCTGGCTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIRLVQR*PLALIT
Trigger: AGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGTCT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461742.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGTAGATGCCACCGTTTaGGTCCTCGTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAVDATV*VLVDLD
Trigger: ATCAAGATCCACGAGGACGCAAACGGTGGCATCTAC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCAGGTCGGGCTGGGTaGACATGCGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPGRAG*TCASGT
Trigger: TGTGCCAGATGCGCATGTGCACCCAGCCCGACCTGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCAATCTCAGCCCGCAGTaGACTGATTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLNLSPQ*TDLLAG
Trigger: ACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATT...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGTGGTGCTTGAGCGTCTaGAACCGCCGCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQWCLSV*NRRWLF
Trigger: GAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCA...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAFSSYW*LSVCNR
Trigger: GCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTTGGTCTCCTCCAGCTaGACGATGGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGLVSSS*TMVAWQ
Trigger: CTGCCAGGCCACCATCGTGCAGCTGGAGGAGACCAA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCCTTTTGTGCCACTTaGAGCCCCTTGTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSFCAT*SPLSMD
Trigger: ATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTTGTGGCCAGTCAGCTTaGCGACAGGCTGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFCGQSA*RQAGTC
Trigger: GCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACA...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTTGCTGGATGAGCTCCTaGTGGTCTAGGTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: CKGGPALHASFKAENVSPCWMSS*WSRSHF
Trigger: GAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCA...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACACACCCAGTCCTTGTaGGCATTGGGGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTHTQSL*ALGICW
Trigger: CCAGCAAATCCCCAATGCGCACAAGGACTGGGTGTG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCAATGTGGCCACGACTaGCAGGAGGGGAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLQCGHD*QEGNKK
Trigger: CTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGGGTTAAGGGTTAGCTaGAAGGCCCAGCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGGLRVS*KAQPPT
Trigger: TGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTTCTTTCTTACAGGTTaGAAGGTCAAAACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLFFLTG*KVKTFC
Trigger: ACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAA...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGGTGGAGCTGGGGGCCTaGCCCCTAACATGGACCTTG +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRVELGA*PLTWTL
Trigger: CAAGGTCCATGTTAGGGGGCAGGCCCCCAGCTCCAC...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAACGCAGCAGTCCCCCTaGCCGGCCATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKTQQSP*PAMALW
Trigger: CCAGAGGGCCATGGCCGGCCAGGGGGACTGCTGCGT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACACGCAGCAGTCCCCCTaGCCGGCCATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNTQQSP*PAMALW
Trigger: CCAGAGGGCCATGGCCGGCCAGGGGGACTGCTGCGT...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATTCCCCAGCAGGACCTaGGGCTCTCCCGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSFPSRT*GSPGVT
Trigger: TGTTACCCCGGGAGAGCCCCAGGTCCTGCTGGGGAA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAGCTTGCTCACACAGGTaGAATAGATCTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRACSHR*NRSVLA
Trigger: GGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGC...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATGGATCAGCTCCTCCTaGGAGTGGATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTWISSS*EWMRRE
Trigger: TTCTCGCCTCATCCACTCCCAGGAGGAGCTGATCCA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTGTGCACATGCGCATCTaGCACAGGTGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLVHMRI*HRWMVK
Trigger: CTTCACCATCCACCTGTGCCAGATGCGCATGTGCAC...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTACCACCTTCTTGCTCTaGTCCCCTAAGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLTTFLL*SPKALI
Trigger: GATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGT...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASALIC*LVLSWF
Trigger: GAACCAGGACAAGACCAGCCAGCAAATCAGTGCACT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATGCCATCGCCGGCCTTaGCTAGCAGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSCHRRP*LAAGWP
Trigger: AGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGCAGGGACTCGTTCATaGCTTCACTCTCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAAGTRS*LHSLEA
Trigger: AGCTTCTAGAGAGTGAAGCCATGAACGAGTCCCTGC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSFSSY*CLSVCN
Trigger: GTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTCTCCCGGTTCCTCTTaGTCTCCACTAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCSPGSS*SPLAAA
Trigger: GGCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGATTTTGCGGTTCCACTaGCGCACGATGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQILRFH*RTMLET
Trigger: TGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAAT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACTGGCCCCCTTCTTCTaGAACTTCTTTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTLAPFF*NFFRAG
Trigger: TCCTGCCCGAAAGAAGTTCCAGAAGAAGGGGGCCAG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTGCACGATGGTGGCCTaGCAGTCGGTGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGCTMVA*QSVMPS
Trigger: TGACGGCATCACCGACTGCCAGGCCACCATCGTGCA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTAGTCCAGCTCCTCCTTaGTCTCCTCCAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFSPAPP*SPPAAR
Trigger: TCGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACT...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSNSRI*ASFCAT
Trigger: AGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGTTCATGGTGAATGACTaGGAGAAGCTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRFMVND*EKLPSE
Trigger: CTCTGAGGGCAGCTTCTCCCAGTCATTCACCATGAA...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGAACTTGAAATCGTCATaGCTGGTGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLNLKSS*LVEPFM
Trigger: CATGAAAGGCTCCACCAGCCATGACGATTTCAAGTT...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGGAGACACACTGCAGTaGGGCCGTCCGTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSGDTLQ*GRPCTL
Trigger: AAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAACCACGTTGTTGGGGTaGCCCTTTAGAGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGTTLLG*PFRAAI
Trigger: GATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTGGCACGGGTGGATGTaGCGGCACAGGCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSWHGWM*RHRHPL
Trigger: CAGGGGATGCCTGTGCCGCCACATCCACCCGTGCCA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTTGATGGGACTGTCGTaGCCCTTGATCTCACCGATG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLMGLS*PLISPM
Trigger: CATCGGTGAGATCAAGGGCCACGACAGTCCCATCAA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACAAACTCCCCAAATGTaGTTGGGGCTGGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTQTPQM*LGLGGK
Trigger: CTTGCCTCCCAGCCCCAACCACATTTGGGGAGTTTG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGATCACCGTCAGGTCACTaGGGTGGAGGACAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGSPSGH*GGGQSG
Trigger: TCCACTTTGTCCTCCACCCCAGTGACCTGACGGTGA...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAGCTCCTCGGAAGGGTaGGATGGGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSSSEG*DGARLL
Trigger: CAGCAGCCTGGCCCCATCCCACCCTTCCGAGGAGCT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCATCCTCTGAAGGGAGGTaGGGCTGGCTCTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSSSEGR*GWLLAP
Trigger: GGGAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGA...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTGTTGGCGGGGAGGAGTaGGAAGAGATTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLVGGEE*EEICGH
Trigger: GTGGCCACAAATCTCTTCCCACTCCTCCCCGCCAAC...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTGGACAGAGCCAACGTaGGGGGATCCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSWTEPT*GDPPGP
Trigger: AGGCCCGGGAGGATCCCCCCACGTTGGCTCTGTCCA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGCCCCCAATCTCACTTTaGACAGAGCCAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMPPISL*TEPTWG
Trigger: CCCCCACGTTGGCTCTGTCCAAAGTGAGATTGGGGG...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTTACTCCTGGTCCCATaGCGTAAAGATGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLLLVP*RKDVAG
Trigger: CCCAGCCACATCTTTACGCCATGGGACCAGGAGTAA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp TATGCCAAGCAAGGAGAGCAGCAAGCAGTTGCCTGTTaGGGATGGCAAAGGGACACATACCACAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: YAKQGEQQAVAC*GWQRDTYHRSG
Trigger: CCCGGACCTGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPHTGA*ASATAA
Trigger: AGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGTGGAGCCTTTCATGGTaGATGACTGGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARWSLSW*MTGRSC
Trigger: GCAGCTTCTCCCAGTCATTCACCATGAAAGGCTCCA...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATTGGAGCCTTTCATGGTaGATGACTGGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNWSLSW*MTGRSC
Trigger: GCAGCTTCTCCCAGTCATTCACCATGAAAGGCTCCA...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCAGGCCAGGGACTTGGTaGTGTTCTTGGTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLRPGTW*CSWWRY
Trigger: ATATCTCCACCAAGAACATCACCAAGTCCCTGGCCT...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLGSDYW*DERRHC
Trigger: GCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTAGGTCCCACTTCTTaGTGCCGTTATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQALGPTS*CRYLGS
Trigger: GCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAG...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPVSLAT*GLIFLG
Trigger: GCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAAC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGACAAGACCTCGCGAGTaGGAAGACACATGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWTRPRE*EDTCGA
Trigger: GGCACCACATGTGTCTTCTCACTCGCGAGGTCTTGT...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCGGGGCGCCAGAACACTaGTTTAACAATTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCGAPEH*FNNFPG
Trigger: TCCGGGGAAATTGTTAAATCAGTGTTCTGGCGCCCC...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGAGAATCCAACTCTCATaGAGCACAACTCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQRIQLS*STTRGV
Trigger: GACACCCCGAGTTGTGCTTCATGAGAGTTGGATTCT...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGGCACAGGACTATGCTaGAGAGGCCCAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSGTGLC*RGPRAV
Trigger: CACTGCCCTTGGGCCTCTTCAGCATAGTCCTGTGCC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAAGCAAATACTGAACTaGCTGATAGTGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGKQILN*LIVRTG
Trigger: CCCTGTCCTCACTATCAGTCAGTTCAGTATTTGCTT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTGGTCACTGGAGGCTGTaGAGATATGCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: CKGGPALHASFKAENVSPGHWRL*RYAWHW
Trigger: CCAATGCCAAGCATATCTTCACAGCCTCCAGTGACC...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCTCCTCCTCCGACGTTaGCATGTCAAAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGLLLRR*HVKASA
Trigger: GGCACTGGCTTTGACATGGCAACGTCGGAGGAGGAG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGGCTTGCGCTCGGCAATaGCCCCAAAGAGGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSACARQ*PQRGVR
Trigger: TCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGC...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCTGTGCCCGGCGCTTaGGCTCGGCAATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPVPGA*ARQCPQ
Trigger: TTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTGGGAGCGTGAGCTCTaGACGTTCATCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGWEREL*TFIWVL
Trigger: CAGCACCCAGATGAACGTGCAGAGCTCACGCTCCCA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACGTGCACCACCTTCTTaGTCTGGTCCCCTAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSRAPPS*SGPLRR
Trigger: GCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACTCCTGTTGGAGTTTTaGCCTCTTTTTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTLLLEF*PLFEGF
Trigger: GAAGCCTTCAAAAAGAGGGCAAAACTCCAACAGGAG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGATGGTGCTGAGGTTCTaGAGCACACGGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSMVLRF*STRSRS
Trigger: GGAGCGCGACCGTGTGCTGCAGAACCTCAGCACCAT...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTPLLIV*LDLVGL
Trigger: AAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACACTCCTTCTTGAGCTGTaGGATCTCCCGGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTLLLEL*DLPVPL
Trigger: AAGAGGAACCGGGAGATCGCACAGCTCAAGAAGGAG...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTGGCCAGGCGCCTCAGTaGAGAAACCTCCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCGQAPQ*RNLLGL
Trigger: AAGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCC...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATGGCGAGACACTCGATaGCATCGTAGTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSWRDTR*HRSAGA
Trigger: AGCCCCCGCACTACGATGGCATCGAGTGTCTCGCCA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AAGCATGGCTTACGGGGAGGTGGACTGCAGGTGGTGGGGTGCTGGGCAGATGGAGCTTGTAAACAGTCATaGGGACGGATTCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: KHGLRGGGLQVVGCWADGACKQS*GRILSY
Trigger: GTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC...TCCATCTGCCCAGCACCCCACCACCTGCAGTCCACCTCCCCGTAAGCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATGGGCCTGTCAAGTCTaGCTGCGGGACCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSWACQV*LRDPAI
Trigger: AATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGCGCAAGGCAACTCCATaGGCTGCCTTTGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARRKATP*AAFESS
Trigger: AGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCG...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAACGCAAGGCAACTCCATaGGCTGCCTTTGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKRKATP*AAFESS
Trigger: AGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCG...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTCAAAGGCTTGGGTGTaGCAGGCTCCGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTISKAWV*QAPPVN
Trigger: ATTAACAGGCGGAGCCTGGCACACCCAAGCCTTTGA...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCTTGCTCACACAGGTaGAATAGATCTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGACSHR*NRSVLA
Trigger: GGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGACCGTTTGCGTCCTCGTaGATCTTGATGTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGPFASS*ILMLDL
Trigger: CAGGTCCAACATCAAGATCCACGAGGACGCAAACGG...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCGTTTGCGTCCTCGTaGATCTTGATGTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLPFASS*ILMLDL
Trigger: CAGGTCCAACATCAAGATCCACGAGGACGCAAACGG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAATGGATCAGCTCCTCCTaGGAGTGGATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKWISSS*EWMRRE
Trigger: TTCTCGCCTCATCCACTCCCAGGAGGAGCTGATCCA...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNASALIC*LVLSWF
Trigger: GAACCAGGACAAGACCAGCCAGCAAATCAGTGCACT...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSALIC*LVLSWF
Trigger: GAACCAGGACAAGACCAGCCAGCAAATCAGTGCACT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGCAGGGACTCGTTCATaGCTTCACTCTCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLAGTRS*LHSLEA
Trigger: AGCTTCTAGAGAGTGAAGCCATGAACGAGTCCCTGC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAACCGAGGCATCCTCCATaGAGCTGGCAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKPRHPP*SWQGCP
Trigger: GGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGG...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCGAGGCATCCTCCATaGAGCTGGCAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPRHPP*SWQGCP
Trigger: GGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCCGAGGCATCCTCCATaGAGCTGGCAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNPRHPP*SWQGCP
Trigger: GGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSVCNRR*LFSSSS
Trigger: CGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGAC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSFSSY*CLSVCN
Trigger: GTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTCCTGCTGCCGCTTCTaGGACTCCAGAGCTCGGATC +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCSCCRF*DSRARI
Trigger: GATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLWSPKK*LILRFH
Trigger: GTGGAACCGCAAAATCAACCACTTCTTGGGGGACCA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTGGCCCCCTTCTTCTaGAACTTCTTTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQALAPFF*NFFRAG
Trigger: TCCTGCCCGAAAGAAGTTCCAGAAGAAGGGGGCCAG...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGCCTTACTGAAGCTCTaGCTGGCCCCCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGALLKL*LAPFFW
Trigger: CCAGAAGAAGGGGGCCAGCCAGAGCTTCAGTAAGGC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTACCACGTTGTTGGGGTaGCCCTTTAGAGCTGCGATC +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQATTLLG*PFRAAI
Trigger: GATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGT...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCAACACAAGCCCCGAGTaGCTGCAGTACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCNTSPE*LQYLME
Trigger: CTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTT...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTGCTGGCTGGCCGTCTaGGTGACCGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSCWLAV*VTVRHI
Trigger: GATGTGCCTGACGGTCACCCAGACGGCCAGCCAGCA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTGTGAGTGGGGCCGATaGTGCCCGTCACACACTCGC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSCEWGR*CPSHTR
Trigger: GCGAGTGTGTGACGGGCACCATCGGCCCCACTCACA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTTGTGAGTGGGGCCGATaGTGCCCGTCACACACTCGC +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSCEWGR*CPSHTR
Trigger: GCGAGTGTGTGACGGGCACCATCGGCCCCACTCACA...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCATTGGGGATTTGCTaGATGAGCTCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTALGIC*MSSCWS
Trigger: AGACCAGCAGGAGCTCATCCAGCAAATCCCCAATGC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTGCATTGGGGATTTGCTaGATGAGCTCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CKGGPALHASFKAENVSPALGIC*MSSCWS
Trigger: AGACCAGCAGGAGCTCATCCAGCAAATCCCCAATGC...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCAGCTCAGATCGAAGTaGGGAAAGAGAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAQLRSK*GKRGKR
Trigger: CCTTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGGGTGGAGGACAAAGTaGAGGGGTGCCGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSGWRTK*RGAGQL
Trigger: GAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCTTCCCGGGGGCGCTaGGCACAAGACCTCGCGAGT +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPSRGR*AQDLAS
Trigger: ACTCGCGAGGTCTTGTGCCCAGCGCCCCCGGGAAGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGAACACAGAACCACCTCTaGAAAGTCCAAAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRTQNHL*KVQKSL
Trigger: CAGTGACTTTTGGACTTTCCAGAGGTGGTTCTGTGT...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAACTTTCTGTTCAGGTTaGCGGGGAGGAGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTTFCSG*RGGVGR
Trigger: TCTTCCCACTCCTCCCCGCCAACCTGAACAGAAAGT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAATTACTCCTGGTCCCATaGCGTAAAGATGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKLLLVP*RKDVAG
Trigger: CCCAGCCACATCTTTACGCCATGGGACCAGGAGTAA...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGATCTTTCCTCCTTCCTTaGAAATCTCGCAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRSFLLP*KSRKAT
Trigger: AGTTGCCTTGCGAGATTTCCAAGGAAGGAGGAAAGA...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGCATGAGTGCTGGGGATaGGGCAGGGGACAGAACAAA +
Preference number: 4 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWHECWG*GRGQNK
Trigger: TTTGTTCTGTCCCCTGCCCCATCCCCAGCACTCATG...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp CCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATaGTGCTCAAATCACAACCATTTTGTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: PGPVKSACGTLP*CSNHNHFVLPT
Trigger: TGTTGGAAGCACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp CTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTaGAGAGTTCTGGCTGCTTCAGAAGAGTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: LGNLARQLHALP*RVLAASEESAT
Trigger: AGTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp CAGGAGGCTATGCCAAGCAAGGAGAGCAGCAAGCAGTaGCCTGTTTGGGATGGCAAAGGGACACATACCACA +
Preference number: 4 (lower is better)
Translates to: QEAMPSKESSKQ*PVWDGKGTHTT
Trigger: TGTGGTATGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTCCTTGCTTGGCATAGCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSGPLRR*SHCPRP
Trigger: TGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAGCCTTGCCGCCTTACTaGAGCTCTGGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKALPPY*SSGWPP
Trigger: AGGGGGCCAGCCAGAGCTTCAGTAAGGCGGCAAGGC...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGCTGACCCCTGGCTCTaGTTACTGGTGAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSADPWL*LLVRRE
Trigger: CTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGGCTGGCCGTCTGGGTaGCCGTCAGGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGGWPSG*PSGTSQ
Trigger: CTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCTAGGTCCCACTTCTTaGTGCCGTTATCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGLGPTS*CRYLGS
Trigger: GCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGTTTCCTTAGCTACCTaGGGACTTATCTTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGVSLAT*GLIFLG
Trigger: GCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAAAC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGATTTCCAGCCATTGCTaGCAGACTGTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LTQETGNQSKLFRLTRARISSHC*QTVQVP
Trigger: TGGGACCTGAACAGTCTGTCAGCAATGGCTGGAAAT...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAATGGGCTCAGGGCTCCTaGAGGACTTCAAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKWAQGS*RTSSLE
Trigger: CTCTAAACTTGAAGTCCTTCAGGAGCCCTGAGCCCA...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTCCTGTGCCCGGCGCTTaGGCTCGGCAATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASPVPGA*ARQCPQ
Trigger: TTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGG...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGACTGGGAATCAGTCCAAGCTTGTCAGGGTCACGGGTaGTGTCAAACAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LRKHKVGLDPGDWESVQACQGHG*CQTGQG
Trigger: TCCTTGACCTGTTTGACAGCACCCGTGACCCTGACA...AGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCATGGGAGCGTGAGCTCTaGACGTTCATCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSWEREL*TFIWVL
Trigger: CAGCACCCAGATGAACGTGCAGAGCTCACGCTCCCA...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCGCAGTGCACTGATTTaGTGGCTGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGRSALI*WLVLSW
Trigger: CCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCAATCTCAGCCCGCAGTaGACTGATTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLNLSPQ*TDLLAG
Trigger: ACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATT...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTCACCAATGGCCTCATTaGCATCGCCGGCCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCHQWPH*HRRPWL
Trigger: TAGCCAAGGCCGGCGATGGCAATGAGGCCATTGGTG...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACAGGCCCGTGAGAGGCTaGGGCGCAGGGACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNRPVRG*GAGTRS
Trigger: TGAACGAGTCCCTGCGCCGCAGCCTCTCACGGGCCT...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPSSISF*LISISQ
Trigger: TTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGATTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGFSSYW*LSVCNR
Trigger: GCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAA...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGTCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSRILF*SRISFS
Trigger: GGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGA...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGATCCACTGGCGCACGATaGTGGAGACAGAGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGSTGAR*WRQSGP
Trigger: GGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGTGGA...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTTCGGGGCTCTCAGCCTaGAGCCGCTCCCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASSGLSA*SRSRFL
Trigger: GAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGA...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGGTAGTCAATGTTGGCTaGCAGCACCTCGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKVVNVG*QHLDLL
Trigger: GAGGAGATCGAGGTGCTGGCAGCCAACATTGACTAC...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTCCTTTTGTGCCACTTaGAGCCCCTTGTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLSFCAT*SPLSMD
Trigger: ATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCAGTTCTGGGAGGAGCCTaGCATATCCGTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSVLGGA*HIRLPQ
Trigger: CTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAAC...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAATGACTGGGAGAAGCTaGCCTCAGAGAACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTMTGRS*PQRTLR
Trigger: TCTCAGAGTTCTCTGAGGGCAGCTTCTCCCAGTCAT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGAGTGGGGCCGATGGTaGCCGTCACACACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGEWGRW*PSHTRP
Trigger: TGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTTTTGAGAGTTCTGGCTaGTTCAGAAGAGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLFESSG*FRRVRH
Trigger: GTGGCGGACTCTTCTGAAGCAGCCAGAACTCTCAAA...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGACCACCTTCTTGCTCTaGTCCCCTAAGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQTTFLL*SPKALI
Trigger: GATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATGGCTGGTCTTGTCCTaGTTCACTACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTWLVLS*FTTTLF
Trigger: GAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGTCCTGGCTCATGAGCTaGGTGACGCGGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQSWLMS*VTRLLM
Trigger: CATCAACAACCGCGTCACCCAGCTCATGAGCCAGGA...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGGATCAGCGCACCAATaGCCTCATTGCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSGSAHQ*PHCHRR
Trigger: CCGGCGATGGCAATGAGGCCATTGGTGCGCTGATCC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACGGGCGTGCTCTTTCTaGGCGGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRACSF*AACSFC
Trigger: GCAGAAGCTGCAGGCCGCCCAGAAAGAGCACGCCCG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCTCATCAGGGCCACCTTaGCCTTCTTCATCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLSSGPP*PSSSQP
Trigger: TGGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGA...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTCCTGCTGCCGCTTCTaGGACTCCAGAGCTCGGATC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSCCRF*DSRARI
Trigger: GATCCGAGCTCTGGAGTCCCAGAAGCGGCAGCAGGA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSTVGAG*SPKKWL
Trigger: CAACCACTTCTTGGGGGACCATCCTGCGCCCACTGT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTTCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFSNSRI*ASFCAT
Trigger: AGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGA...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTCATGGTGAATGACTaGGAGAAGCTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIFMVND*EKLPSE
Trigger: CTCTGAGGGCAGCTTCTCCCAGTCATTCACCATGAA...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGACACAGCTTTCATTTaGGCAGACAGTTTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTDTAFI*ADSLGS
Trigger: CGAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCGTCCGTGCACCCTTaGCTCCTCCAACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPSVHP*LLQPGR
Trigger: TCTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTATAGCAACTCATCTGTaGCATCCAGGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLIATHL*HPGRGW
Trigger: CCATCCTCTGCCTGGATGCCACAGATGAGTTGCTAT...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTATAGCAACTCATCTGTaGCATCCAGGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIIATHL*HPGRGW
Trigger: CCATCCTCTGCCTGGATGCCACAGATGAGTTGCTAT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCAAATGTGGTTGGGGCTaGGAGGCAAGCATGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLKCGWG*EASMAY
Trigger: GTAAGCCATGCTTGCCTCCCAGCCCCAACCACATTT...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGGGATAATGCCCTTTaGCTTCACAGCTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGRDNAL*LHSLIS
Trigger: GGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCAGCAGGAGACAATGTaGCCACGACTGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSQQETM*PRLPGG
Trigger: CCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTG...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACTCGGAAGGGTGGGATaGGGCCAGGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGLGRVG*GQAAAP
Trigger: AGGTGCAGCAGCCTGGCCCCATCCCACCCTTCCGAG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTACTGTTGGGGCCAGTTaGGGCTATCTGCGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSTVGAS*GYLRVA
Trigger: GGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAATGCTTGTGCAGTGAGTaGAGCTGGGGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKCLCSE*SWGPAP
Trigger: GGGGGCAGGCCCCCAGCTCCACTCACTGCACAAGCA...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCATGGCGTAAAGATGTaGCTGGGCCTGACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGHGVKM*LGLTRL
Trigger: GAGCCTTGTCAGGCCCAGCCACATCTTTACGCCATG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCAGAGGCCCAAGGGCAGTaGGGATGGAAGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSEAQGQ*GWKTPS
Trigger: AGAAGGAGTCTTCCATCCCCACTGCCCTTGGGCCTC...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp AACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTaGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NPLISFESTKWG*TQETGNQSKLF
Trigger: GAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGGCACAGGTGGATGGTaGAGATGGCGTGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGGTGGW*RWRGSV
Trigger: CACGCTCCCACGCCATCTTCACCATCCACCTGTGCC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGCTACCACCTTGTTCTTaGTGTTGCGGGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRLPPCS*CCGPDW
Trigger: CCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAG...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAGGACGGGTGCCATTaGCAGTGGGCGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLQDGCH*QWAQDG
Trigger: ACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTG...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCCGAGTGGGAGGGGATaGTGGGGGTGTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNPSGRG*WGCESH
Trigger: GTGGGATTCACACCCCCATCATCCCCTCCCACTCGG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCAGTGGCTGCAGTACTTaGTGGAGACCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGSGCST*WRPRCW
Trigger: CCAACAACGTGGTCTCCATCAAGTACTGCAGCCACT...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCTGGCCCGAGGACGTaGGAGTCCGAATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPGPRT*ESECTW
Trigger: CCAAGTGCATTCGGACTCTCACGTCCTCGGGCCAGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGAGTCACTGGAGGCTGTaGAGATATGCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWSHWRL*RYAWHW
Trigger: CCAATGCCAAGCATATCTTCACAGCCTCCAGTGACT...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCATTTCCAGCCATTGCTaGCAGACTGTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLISSHC*QTVQVP
Trigger: TGGGACCTGAACAGTCTGTCAGCAATGGCTGGAAAT...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAAGAATCCAACTCTCATaGAGCACAACTCGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKRIQLS*STTRGV
Trigger: GACACCCCGAGTTGTGCTTCATGAGAGTTGGATTCT...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTAGCCAAGGCCTGGTCTaGGCAAGGGCAGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASSQGLV*ARAAPC
Trigger: ACAGGGGGCTGCCCTTGCTCAGACCAGGCCTTGGCT...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGACCACATCAGGCACATaGGAAAGTCCCCGCAACCTT +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQTTSGT*ESPRNL
Trigger: AAGGTTGCGGGGACTTTCTCATGTGCCTGATGTGGT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTCTCAGGGGTCTTCTCTaGTCCTCGGCTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCLRGLL*SSALCG
Trigger: TCCACAAAGAGCCGAGGATCAGAGAAGACCCCTGAG...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTGTCAGGGTCACGGGTaGTGTCAAACAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGCQGHG*CQTGQG
Trigger: TCCTTGACCTGTTTGACAGCACCCGTGACCCTGACA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACGGGCTGGGTGCACATaGGCATCTGGCACAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRAGCT*ASGTGG
Trigger: TCCACCTGTGCCAGATGCGCATGTGCACCCAGCCCG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGGTCCTGCTTGGCCCTaGGGATCACCTCCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNGPAWP*GSPPRH
Trigger: ATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSSISF*LISISQ
Trigger: TTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGTCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGSSISF*LISISQ
Trigger: TTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGA...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AGDNVATTARRGTRRDNAPLLIV*LDLVGL
Trigger: AAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGACAATGGTCATTCTCTaGATGACGATGTCAATGATC +
Preference number: 4 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVTMVIL*MTMSMI
Trigger: GATCATTGACATCGTCATGCAGAGAATGACCATTGT...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTACAATGGTCATTCTCTaGATGACGATGTCAATGATC +
Preference number: 4 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLTMVIL*MTMSMI
Trigger: GATCATTGACATCGTCATGCAGAGAATGACCATTGT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATCCTTTTGTGCCACTTaGAGCCCCTTGTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSFCAT*SPLSMD
Trigger: ATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGCTGGGCTTCCTTTTGTaGCACTTGCAGCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRLGFLL*HLQPLV
Trigger: GACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAG...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTCTGGGCTTCCTTTTGTaGCACTTGCAGCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCLGFLL*HLQPLV
Trigger: GACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAG...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGATGACTGGGAGAAGCTaGCCTCAGAGAACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMMTGRS*PQRTLR
Trigger: TCTCAGAGTTCTCTGAGGGCAGCTTCTCCCAGTCAT...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGTCTGTGGCTCGAGATTaGCTAGGGAAAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRSVARD*LGKVLP
Trigger: GGGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGA...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACAGACATTGCGGTCATTaGGGGGCCGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNRHCGH*GAEWEG
Trigger: CCCCTCCCACTCGGCCCCGCAATGACCGCAATGTCT...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAGACATTGCGGTCATTaGGGGGCCGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRHCGH*GAEWEG
Trigger: CCCCTCCCACTCGGCCCCGCAATGACCGCAATGTCT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGATGCGGACGGCATTaGCCGAGGCGGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRCGRH*PRRRTA
Trigger: TGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGTCACCACGAGGTCATaGTGGCTGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGVTTRS*WLAVWV
Trigger: CACCCAGACGGCCAGCCAGCATGACCTCGTGGTGAC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAGTCACCACGAGGTCATaGTGGCTGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKVTTRS*WLAVWV
Trigger: CACCCAGACGGCCAGCCAGCATGACCTCGTGGTGAC...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTGCGCATTGGGGATTTaGTGGATGAGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCCALGI*WMSSCW
Trigger: CCAGCAGGAGCTCATCCAGCAAATCCCCAATGCGCA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCACACCCAGTCCTTGTaGGCATTGGGGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSHTQSL*ALGICW
Trigger: CCAGCAAATCCCCAATGCGCACAAGGACTGGGTGTG...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTCACACCCAGTCCTTGTaGGCATTGGGGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCHTQSL*ALGICW
Trigger: CCAGCAAATCCCCAATGCGCACAAGGACTGGGTGTG...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGATCACAACCATTTTGTaGTTCCAACATTTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: EEICGHILELRGLPGTPGITTIL*FQHLGC
Trigger: GCACCCTAAATGTTGGAAGCACAAAATGGTTGTGAT...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTTTTTGTGCTTTAAACTaGCCTCTGCCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLFCALN*PLPRPH
Trigger: GTGTGGCCTGGGCAGAGGGCAGTTTAAAGCACAAAA...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTGGGAAGAAAGTCACTaGTCCTGCAGGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCWEESH*SCRAGS
Trigger: AGAGCCTGCCCTGCAGGAGCAGTGACTTTCTTCCCA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGTTCTCCTTCGACAGCTaGGGCCGGATCCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLFSFDS*GRILTA
Trigger: GGCCGTCAGGATCCGGCCCCAGCTGTCGAAGGAGAA...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGCTTGCTCACACAGGTaGAATAGATCTGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGACSHR*NRSVLA
Trigger: GGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGMLDLR*RVSGSR
Trigger: CCGTGACCCTGACACCCGCCACCGCAGGTCCAACAT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACGTTCATCTGGGTGCTaGCTGTGGTGCGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRSSGC*LWCGTG
Trigger: CCCTGTCCCGCACCACAGCCAGCACCCAGATGAACG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGTGCACATGCGCATCTaGCACAGGTGGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSVHMRI*HRWMVK
Trigger: CTTCACCATCCACCTGTGCCAGATGCGCATGTGCAC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGCAGGGACTCGTTCATaGCTTCACTCTCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKAGTRS*LHSLEA
Trigger: AGCTTCTAGAGAGTGAAGCCATGAACGAGTCCCTGC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGVCNRR*LFSSSS
Trigger: CGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGAC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATCTCCCGGTTCCTCTTaGTCTCCACTAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSPGSS*SPLAAA
Trigger: GGCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTCCACCCGCTCAGACATaGGCTTGGCCAGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASPPAQT*AWPGAS
Trigger: TGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGG...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTCCCCAGAGTCCAGCATaGGTGGCTTTAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSPQSPA*VALVLH
Trigger: GTGCAGGACTAAAGCCACCCATGCTGGACTCTGGGG...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGCGTCCAGGAGCAGATaGTTCTGGGAGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGASRSR*FWEEPA
Trigger: GGCAGGCTCCTCCCAGAACCATCTGCTCCTGGACGC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTCTCCTCATCTGTGCTaGCGTAGCCATTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGSPHLC*RSHSPA
Trigger: AGCAGGAGAATGGCTACGCCAGCACAGATGAGGAGA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGAACTTGAAATCGTCATaGCTGGTGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLNLKSS*LVEPFM
Trigger: CATGAAAGGCTCCACCAGCCATGACGATTTCAAGTT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGGTGGAGATATCCAGTaGGGGGCCCAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGGGDIQ*GAQALS
Trigger: GCTGAGTGCCTGGGCCCCCCACTGGATATCTCCACC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGGAGACACACTGCAGTaGGGCCGTCCGTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKGDTLQ*GRPCTL
Trigger: AAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGGCAGAGGATGGGCTTaGTGTGGCCTTCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGGRGWA*CGLRPW
Trigger: CCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCATGGAGACCACGTTGTTaGGGTGGCCCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSWRPRC*GGPLEL
Trigger: CAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCA...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAACCACGAGGTCATGCTaGCTGGCCGTCTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGTTRSC*LAVWVT
Trigger: GGTCACCCAGACGGCCAGCCAGCATGACCTCGTGGT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAGCTCCTCGGAAGGGTaGGATGGGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSSSEG*DGARLL
Trigger: CAGCAGCCTGGCCCCATCCCACCCTTCCGAGGAGCT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGTTGGCGGGGAGGAGTaGGAAGAGATTTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSVGGEE*EEICGH
Trigger: GTGGCCACAAATCTCTTCCCACTCCTCCCCGCCAAC...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGCTGCCCCAGACTTCAATACATCCCTGAAAGAGTaGGCAGAGAATCCAACTCTC +
Preference number: 4 (lower is better)
Translates to: RPASKGVSFLLSAAPDFNTSLKE*AENPTL
Trigger: GAGAGTTGGATTCTCTGCCCACTCTTTCAGGGATGT...ATTGAAGTCTGGGGCAGCTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGAGGCCCAAGGGCAGTaGGGATGGAAGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSEAQGQ*GWKTPS
Trigger: AGAAGGAGTCTTCCATCCCCACTGCCCTTGGGCCTC...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKGPLRR*SHCPRP
Trigger: TGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGACGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCA +
Preference number: 4 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGRSASA*FRSHKS
Trigger: TGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCG...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCTGCACATTGTAGATaGGGGCCTGCAGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKAAHCR*GPAARG
Trigger: ACCCCGAGCTGCAGGCCCTCATCTACAATGTGCAGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCCCTTGTCCAGCGCTaGCCCCTGGCTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKALVQR*PLALIT
Trigger: AGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGGGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAGTCACTGCGTCCTCTaGAGGGAGGTGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSHCVL*REVGLA
Trigger: AGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTTGGAAATCTCGCAAGGCAACTCCATGCGCTGCCTTTGAGAGTTCTGGCTGCAAGCAAATACTGAACTaGCTGATAGTGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PWKSRKATPCAAFESSGCKQILN*LIVRTG
Trigger: CCCTGTCCTCACTATCAGTCAGTTCAGTATTTGCTT...GCAGCCAGAACTCTCAAAGGCAGCGCATGGAGTTGCCTTGCGAGATTTCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAACACAAACACGATGGTaGACAGACCAGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSTQTRW*TDQAQA
Trigger: TGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACCATGTCAAAGCCAGTaGCCATGGTGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSPCQSQ*PWCTSS
Trigger: GGAAGACGTACACCATGGGCACTGGCTTTGACATGG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCCCCCAAAGAGGTGTaGGATGGCCCTCGGGATGAT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKAPKEV*DGPRDD
Trigger: ATCATCCCGAGGGCCATCGCACACCTCTTTGGGGGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCTTGCGCTCGGCAATaGCCCCAAAGAGGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKACARQ*PQRGVR
Trigger: TCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGTGTCAGGGTCACGGGTaGTGTCAAACAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRCQGHG*CQTGQG
Trigger: TCCTTGACCTGTTTGACAGCACCCGTGACCCTGACA...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSRILF*SRISFS
Trigger: GGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCACTCCTTCTTGAGCTGTaGGATCTCCCGGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSLLLEL*DLPVPL
Trigger: AAGAGGAACCGGGAGATCGCACAGCTCAAGAAGGAG...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGTCCTTTTGTGCCACTTaGAGCCCCTTGTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKSFCAT*SPLSMD
Trigger: ATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGA...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCAGATCTCCTCATCTGTaGTGGCGTAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGRSPHL*WRSHSP
Trigger: AGGAGAATGGCTACGCCAGCACAGATGAGGAGATCT...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCCAAGTTCCACATCTTaGAGCTTCGGTCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGPSSTS*SFGLWT
Trigger: GGTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLEAVKI*LALVQM
Trigger: CATCTGCACCAATGCCAAGCATATCTTCACAGCCTC...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGCTGTCCCACTGTTCATaGTTGGAAAAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRLSHCS*LEKDGG
Trigger: CCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAG...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGGGCTCAGAGGCAGGTaGAGTGGCTCTAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTGLRGR*SGSRGW
Trigger: CCAGCCTCTAGAGCCACTGCACCTGCCTCTGAGCCC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGGAGAGGGCTCCAAGTaGCCCAGCCCAAGACGGAGA +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTGEGSK*PSPRRR
Trigger: TCTCCGTCTTGGGCTGGGGCACTTGGAGCCCTCTCC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACAAAGCCAGTGCCCATaGTGTACGTCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKQSQCP*CTSSRP
Trigger: GGGCCGGGAAGACGTACACCATGGGCACTGGCTTTG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTMLDLR*RVSGSR
Trigger: CCGTGACCCTGACACCCGCCACCGCAGGTCCAACAT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGSALIC*LVLSWF
Trigger: GAACCAGGACAAGACCAGCCAGCAAATCAGTGCACT...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGGATCAGCGCACCAATaGCCTCATTGCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKGSAHQ*PHCHRR
Trigger: CCGGCGATGGCAATGAGGCCATTGGTGCGCTGATCC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSSNSRI*ASFCAT
Trigger: AGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAGGAGCAGATGGTTCTaGGAGGAGCCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSRSRWF*EEPAIS
Trigger: GGATATGGCAGGCTCCTCCCAGAACCATCTGCTCCT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCATCTCCTCATCTGTGCTaGCGTAGCCATTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSSPHLC*RSHSPA
Trigger: AGCAGGAGAATGGCTACGCCAGCACAGATGAGGAGA...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTTCATGGTGAATGACTaGGAGAAGCTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGFMVND*EKLPSE
Trigger: CTCTGAGGGCAGCTTCTCCCAGTCATTCACCATGAA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGARSCE*GRWCPS
Trigger: TGACGGGCACCATCGGCCCCACTCACAACTTCGAGC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNARSCE*GRWCPS
Trigger: TGACGGGCACCATCGGCCCCACTCACAACTTCGAGC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGTTGATGGGACTGTCGTaGCCCTTGATCTCACCGATG +
Preference number: 4 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRLMGLS*PLISPM
Trigger: CATCGGTGAGATCAAGGGCCACGACAGTCCCATCAA...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGAGAGCGCTTTACTCCTaGTCCCATGGCGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQRALYS*SHGVKM
Trigger: CATCTTTACGCCATGGGACCAGGAGTAAAGCGCTCT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGCACTCCATGGTGCTaGGGTTCTGCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSTPWC*GSAAHG
Trigger: ACCGTGTGCTGCAGAACCTCAGCACCATGGAGTGCT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGAGCACTCCATGGTGCTaGGGTTCTGCAGCACACGGT +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLSTPWC*GSAAHG
Trigger: ACCGTGTGCTGCAGAACCTCAGCACCATGGAGTGCT...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAAGGCCAGGGACTTGGTaGTGTTCTTGGTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSRPGTW*CSWWRY
Trigger: ATATCTCCACCAAGAACATCACCAAGTCCCTGGCCT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCACTCCGTCCTCTTTaGTCTCAACGAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPLRPL*SQRGRP
Trigger: TGGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCAGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGC +
Preference number: 4 (lower is better)
Translates to: CGGVSISYFPARPSGHGSGSDYW*DERRHC
Trigger: GCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCC...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCTGACCCCTGGCTCTaGTTACTGGTGAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKADPWL*LLVRRE
Trigger: CTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCGAAAATGTGTCTCCTaGATAACCAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: IADRLFRSQETSIQGGLLRKCVS*ITRERE
Trigger: TTCTCTCTCTCTGGTTATTCAGGAGACACATTTTCG...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTAGTTTAGAGAGTCAATaGCACTTGCCAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFSLESQ*HLPGQQ
Trigger: CTGCTGTCCTGGCAAGTGTCATTGACTCTCTAAACT...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTGGGGCATTGGCCACTaGCCAGGAGGCTATGCCAAG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTWGIGH*PGGYAK
Trigger: CTTGGCATAGCCTCCTGGTCAGTGGCCAATGCCCCA...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGTAGATGCCACCGTTTaGGTCCTCGTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDNALWLHSLISSPASLSVDATV*VLVDLD
Trigger: ATCAAGATCCACGAGGACGCAAACGGTGGCATCTAC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAGGACCATCTCCTGCTaGCGCTTCTGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRTISC*RFWDSR
Trigger: TCTGGAGTCCCAGAAGCGGCAGCAGGAGATGGTCCT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGTTCTGGGAGGAGCCTaGCATATCCGTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKVLGGA*HIRLPQ
Trigger: CTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAAC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGGACGAGAGAAGACATTaGGGTCATTGCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLDERRH*GHCGAE
Trigger: CTCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTC...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGACAAAGTGGAGGGGTaGCGGTCAGCTCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKDKVEG*RSALAV
Trigger: CACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTCCTTGATAATTTTCTaGAAGGGAGGGCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCSLIIF*KGGPAL
Trigger: GAGCGCAGGCCCTCCCTTGCAGAAAATTATCAAGGA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTCGGCCAGGTCCGCCTaGAAGTTCACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSARSA*KFTSFS
Trigger: GGAGAAGGAGGTGAACTTCCAGGCGGACCTGGCCGA...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCCCAGAGTCCAGCATaGGTGGCTTTAGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPQSPA*VALVLH
Trigger: GTGCAGGACTAAAGCCACCCATGCTGGACTCTGGGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTATTTTGCGGTTCCACTaGCGCACGATGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSILRFH*RTMLET
Trigger: TGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAAT...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGGATGGGCTTGGTGTaGCCTTCGGCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRMGLV*PSAMET
Trigger: TGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAACACAAGCCCCGAGTaGCTGCAGTACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSNTSPE*LQYLME
Trigger: CTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGCAGCGGACTCCCTTTaGGATTTCTGGCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGAADSL*DFWPPR
Trigger: TCTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGAGAGCGCTTTACTCCTaGTCCCATGGCGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSRALYS*SHGVKM
Trigger: CATCTTTACGCCATGGGACCAGGAGTAAAGCGCTCT...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGTTCGAAAGCACAAAGTaGGGCTTGACCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: VADPSETAENGHDDEHLSFESTK*GLTQET
Trigger: AGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAA...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGGTGAGGACAGGGCCCTaGCACAGGACTATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLVRTGP*HRTMLK
Trigger: CTTCAGCATAGTCCTGTGCCAGGGCCCTGTCCTCAC...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGTCTTTCCTCCTTCCTTaGAAATCTCGCAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKSFLLP*KSRKAT
Trigger: AGTTGCCTTGCGAGATTTCCAAGGAAGGAGGAAAGA...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
3UTR CAA 72 bp GCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTaGTGCTTCCAACATTTAGGGTGCTTGTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGPCHCAQITTI*CFQHLGCLCSE
Trigger: CTCACTGCACAAGCACCCTAAATGTTGGAAGCACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAACATGAAATCTCGGTCTaGGGGGCTCACACAGGCGAT +
Preference number: 4 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKHEISV*GAHTGD
Trigger: ATCGCCTGTGTGAGCCCCTCAGACCGAGATTTCATG...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCCCCAAGAAGTGGTTaGTTTTGCGGTTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPPRSG*FCGSTG
Trigger: GCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGATGGGGATTTGCTGGATaGGCTCCTGCTGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGWGFAG*APAGLG
Trigger: ACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCA...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGCGAAAATGTGTCTCCTaGATAACCAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKRKCVS*ITRERE
Trigger: TTCTCTCTCTCTGGTTATTCAGGAGACACATTTTCG...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGCACAAAGTGGGGCTTaGCCCAGGAGACTGGGAATC +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTAQSGA*PRRLGI
Trigger: GATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSISSI*SRAISA
Trigger: GGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSFSSYW*LSVCNR
Trigger: GCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCATAGGCCAGCACCGTaGCATTATAGCCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLHRPAP*HYSPRS
Trigger: GCTTCGAGGGCTATAATGCCACGGTGCTGGCCTATG...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAGCTCCTCCTGGGAGTaGATGAGGCGAGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSSSWE*MRREVT
Trigger: CGTCACTTCTCGCCTCATCCACTCCCAGGAGGAGCT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTATGGTGAAGATGGCGTaGGAGCGTGAGCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASMVKMA*ERELCT
Trigger: CGTGCAGAGCTCACGCTCCCACGCCATCTTCACCAT...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAACCACCTTCTTGCTCTaGTCCCCTAAGGCGCTGATC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGTTFLL*SPKALI
Trigger: GATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTGCAGGGACTCGTTCATaGCTTCACTCTCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSAGTRS*LHSLEA
Trigger: AGCTTCTAGAGAGTGAAGCCATGAACGAGTCCCTGC...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACTGGCCCCCTTCTTCTaGAACTTCTTTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGLAPFF*NFFRAG
Trigger: TCCTGCCCGAAAGAAGTTCCAGAAGAAGGGGGCCAG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGGAGCAGATGGTTCTaGGAGGAGCCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRSRWF*EEPAIS
Trigger: GGATATGGCAGGCTCCTCCCAGAACCATCTGCTCCT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAGGAGCAGATGGTTCTaGGAGGAGCCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRSRWF*EEPAIS
Trigger: GGATATGGCAGGCTCCTCCCAGAACCATCTGCTCCT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAGGATGGGCTTGGTGTaGCCTTCGGCCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTRMGLV*PSAMET
Trigger: TGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGGATGTCTCCCTGGATaGCGAGACACTCGATGCCAT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKGCLPG*RDTRCH
Trigger: ATGGCATCGAGTGTCTCGCCATCCAGGGAGACATCC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATAACTTTCATACACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACATGTCCCCAGAGCAGCTaGCCCCATCGGCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ITFIHYVQPSAEVQNIYTCPQSS*PHRPGH
Trigger: GTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACA...TGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTGTATGAAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTAGGGATAATGCCCTTTaGCTTCACAGCTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: DEHLSQGHKITLRARTRLRDNAL*LHSLIS
Trigger: GGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGACACAGAACCACCTCTaGAAAGTCCAAAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: ADPSETAENGHDDEHLSQTQNHL*KVQKSL
Trigger: CAGTGACTTTTGGACTTTCCAGAGGTGGTTCTGTGT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTCCTCCAGTCTTAAGATaGGCACAGAAGGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSPPVLR*AQKGKK
Trigger: CTTCTTGCCCTTCTGTGCCCATCTTAAGACTGGAGG...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCTCAGGGGTCTTCTCTaGTCCTCGGCTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTLRGLL*SSALCG
Trigger: TCCACAAAGAGCCGAGGATCAGAGAAGACCCCTGAG...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCATGTCAAAGCCAGTaGCCATGGTGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPCQSQ*PWCTSS
Trigger: GGAAGACGTACACCATGGGCACTGGCTTTGACATGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATGTCAGGGTCACGGGTaGTGTCAAACAGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKCQGHG*CQTGQG
Trigger: TCCTTGACCTGTTTGACAGCACCCGTGACCCTGACA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSISSI*SRAISA
Trigger: GGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGA...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp GGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGTGTCTCACAATGGTCATTCTCTaGATGACGATGTCAATGATC +
Preference number: 4 (lower is better)
Translates to: GQRSVMFPNVTAATCWCLTMVIL*MTMSMI
Trigger: GATCATTGACATCGTCATGCAGAGAATGACCATTGT...GAGACACCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSEAVKI*LALVQM
Trigger: CATCTGCACCAATGCCAAGCATATCTTCACAGCCTC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCGTTTGCGTCCTCGTaGATCTTGATGTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPFASS*ILMLDL
Trigger: CAGGTCCAACATCAAGATCCACGAGGACGCAAACGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTCCTGGCTCATGAGCTaGGTGACGCGGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTSWLMS*VTRLLM
Trigger: CATCAACAACCGCGTCACCCAGCTCATGAGCCAGGA...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSFSSY*CLSVCN
Trigger: GTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAATTTTGCGGTTCCACTaGCGCACGATGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGILRFH*RTMLET
Trigger: TGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAAT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTTGGAGACCACGTTGTTaGGGTGGCCCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASWRPRC*GGPLEL
Trigger: CAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCA...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAACACAAGCCCCGAGTaGCTGCAGTACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGNTSPE*LQYLME
Trigger: CTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAACAGGATGTCTCCCTaGATGGCGAGACACTCGATG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKNRMSP*MARHSM
Trigger: CATCGAGTGTCTCGCCATCCAGGGAGACATCCTGTT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCATTGGGGATTTGCTaGATGAGCTCCTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKALGIC*MSSCWS
Trigger: AGACCAGCAGGAGCTCATCCAGCAAATCCCCAATGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACCCCACTGTTCATGCTTaGAAAAGGACGGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNPTVHA*KRTVGA
Trigger: TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGG...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCCACTGTTCATGCTTaGAAAAGGACGGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPTVHA*KRTVGA
Trigger: TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR TCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGGSDYW*DERRHC
Trigger: GCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCTCCTGTTGGAGTTTTaGCCTCTTTTTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSLLLEF*PLFEGF
Trigger: GAAGCCTTCAAAAAGAGGGCAAAACTCCAACAGGAG...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR GCA 90 bp TGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGTTCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: CQVCLRDPAIVLKSQPFCSSISF*LISISQ
Trigger: TTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGA...ACAAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGTTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGC +
Preference number: 4 (lower is better)
Translates to: RVSIACKQSCGRILSYRLFSSYW*LSVCNR
Trigger: GCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAA...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGATGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGWSPKK*LILRFH
Trigger: GTGGAACCGCAAAATCAACCACTTCTTGGGGGACCA...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATAACTTTCATACACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACAGCGTCCAGGAGCAGATaGTTCTGGGAGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ITFIHYVQPSAEVQNIYTASRSR*FWEEPA
Trigger: GGCAGGCTCCTCCCAGAACCATCTGCTCCTGGACGC...TGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTGTATGAAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAATAGCAACTCATCTGTaGCATCCAGGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKIATHL*HPGRGW
Trigger: CCATCCTCTGCCTGGATGCCACAGATGAGTTGCTAT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTCGAAAGCACAAAGTaGGGCTTGACCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNFESTK*GLTQET
Trigger: AGTCTCCTGGGTCAAGCCCCACTTTGTGCTTTCGAA...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTGTAGATGCCACCGTTTaGGTCCTCGTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASVDATV*VLVDLD
Trigger: ATCAAGATCCACGAGGACGCAAACGGTGGCATCTAC...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCCAAGTTCCACATCTTaGAGCTTCGGTCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTPSSTS*SFGLWT
Trigger: GGTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGG...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKEAVKI*LALVQM
Trigger: CATCTGCACCAATGCCAAGCATATCTTCACAGCCTC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGCAAAATCTGTCCTTaGACACAAGAGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNCKICP*TQEGRE
Trigger: TTCCCTGCCCTCTTGTGTGCAAGGACAGATTTTGCA...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAGGGATAATGCCCTTTaGCTTCACAGCTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: RRGTRRDNALWLHSLISSRDNAL*LHSLIS
Trigger: GGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGAGGACTTATCTTTTTaGGCTCAGAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTEDLSF*AQRQVQ
Trigger: CTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRSASA*FRSHKS
Trigger: TGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPLLIV*LDLVGL
Trigger: AAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAACTTGAAATCGTCATaGCTGGTGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKNLKSS*LVEPFM
Trigger: CATGAAAGGCTCCACCAGCCATGACGATTTCAAGTT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CCA 90 bp ATAACTTTCATACACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACTAGCAGCTCCACCTTaGCCCCATCCAAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: ITFIHYVQPSAEVQNIYTLAAPP*PHPKGT
Trigger: GGTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAG...TGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTGTATGAAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR TCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTRSASA*FRSHKS
Trigger: TGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCG...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTCTCCTGTTGGAGTTTTaGCCTCTTTTTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASLLLEF*PLFEGF
Trigger: GAAGCCTTCAAAAAGAGGGCAAAACTCCAACAGGAG...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CCA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTAACTTGAAATCGTCATaGCTGGTGGAGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTNLKSS*LVEPFM
Trigger: CATGAAAGGCTCCACCAGCCATGACGATTTCAAGTT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAACAATGGTCATTCTCTaGATGACGATGTCAATGATC +
Preference number: 4 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGTMVIL*MTMSMI
Trigger: GATCATTGACATCGTCATGCAGAGAATGACCATTGT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTGCTTGTAAACAGTCATaGGGACGGATTCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASACKQS*GRILSY
Trigger: GTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR GCA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTTTCTTTCTTACAGGTTaGAAGGTCAAAACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASFFLTG*KVKTFC
Trigger: ACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAGAA...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS CCA 90 bp CCTGCTTGGCCCTGCGGATCACCTCCGAGGCATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGGCCGGGGCGGCTGGAGAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PAWPCGSPPRHPPWS*QGCPRRPGRLEKHP
Trigger: TGGGTGCTTCTCCAGCCGCCCCGGCCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATTGCCATCGCCGGCCTaGGCTAGCAGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRLPSPA*ASSRLA
Trigger: GGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAGGGGAGATGATGCCCTaGTCCAGCGCTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPGEMMP*SSADPW
Trigger: CCAGGGGTCAGCGCTGGACAAGGGCATCATCTCCCC...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000360529.9
CDS-3UTR CAA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGGCAGGACGGGTGCCATaGACAGTGGGCGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLAGRVP*TVGAGW
Trigger: CCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGC...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTGCAGGACGGGTGCCATaGACAGTGGGCGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPAGRVP*TVGAGW
Trigger: CCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGC...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAAAGGCGCTGATCACATaGCCCAAGGCCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPKALIT*PKASRP
Trigger: TGGCCTGCTGGCCTTGGGCAATGTGATCAGCGCCTT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAACGTGCACCACCTTCTaGCTCTGGTCCCCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPTCTTF*LWSPKA
Trigger: CGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACGT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCACCCACTCCGTCCTCTTaGATCTCAACGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPPTPSS*ISTREA
Trigger: GGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGGG...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS TCA 90 bp TCTGGGGTGGATGTCGGGGGAGGGAGTCCTAGCCCGTTGGTGCTCTaGCCTGGCCTGGCACAGCCCAACTCACCGGCCTTGGCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGVDVGGGSPSPLVL*PGLAQPNSPALASS
Trigger: GCTGCTAGCCAAGGCCGGTGAGTTGGGCTGTGCCAGGCCAGGTCAGAGCACCAACGGGCTAGGACTCCCTCCCCCGACATCCACCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 90 bp AGGCAGAGGATGGGCTTGGTGTGGCCTTCGGCCATGGAGACACACTaGAGTGGGGCCGTCCGTGCACCCTTGGCTCCTCCAACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: RQRMGLVWPSAMETH*SGAVRAPLAPPTGE
Trigger: CTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCTGGTCTGAGCAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCATCCTGACGGCCACCTaGACGCAGCAGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AWSEQGQPPVPDTGTPNLILTAT*TQQSPW
Trigger: CCAGGGGGACTGCTGCGTCAAGGTGGCCGTCAGGAT...GAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTGCTCAGACCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTCGTGGATCTTGATGTaGGACCTGCGGTGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPSWILM*DLRWRV
Trigger: CACCCGCCACCGCAGGTCCAACATCAAGATCCACGA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGGGACTGTCGTGGCCCTaGATCTCACCGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLGLSWP*ISPMGV
Trigger: CACACCCATCGGTGAGATCAAGGGCCACGACAGTCC...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS GCA 90 bp CTGGGCGCTGACTTTGAACTCAGGTCCAGCCACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGCAATGCCCCCAAAGAGGTGTGCGAT +
Preference number: 5 (lower is better)
Translates to: LGADFELRSSHALLL*PALALGNAPKEVCD
Trigger: ATCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTGGCTGGACCTGAGTTCAAAGTCAGCGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp GGTGTGGCCTTCGGCCATGGAGACACACTGCAGTGGGGCCGTCCGTaGACCCTTGGCTCCTCCAACCGGGGAGATGATGCCCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GVAFGHGDTLQWGRP*TLGSSNRGDDALVQ
Trigger: CTGGACAAGGGCATCATCTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGCCGAAGGCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000360529.9
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSCARR*RSAMPP
Trigger: TGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTTTCATCAGGGCCACCTaGGCCTTCTTCATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLFIRAT*AFFISA
Trigger: GGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGAA...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: WCKAARHGCQAPERRKALDALRK*SSRRRA
Trigger: AGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGCTCTGTGGCTCGAGATaGCCTAGGGAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLLCGSR*PRESAA
Trigger: GGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGAG...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCCGTCCGTGCACCCTaGGCTCCTCCAACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPAVRAP*APPTGE
Trigger: CTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAATGGAGACCACGTTGTaGGGGTGGCCCTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPMETTL*GWPFRA
Trigger: AGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCAT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCAGTCCTTGTGCGCATaGGGGATTTGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLQSLCA*GICWMS
Trigger: GCTCATCCAGCAAATCCCCAATGCGCACAAGGACTG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCAAGCACAAAGTGGGGCTaGACCCAGGAGACTGGGAAT +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPSTKWG*TQETGN
Trigger: ATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCT...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp CCTTGGAGCCAGTCACCACGAGGTCATGCTGGCTGGCCGTCTGGGTaGCCGTCAGGCACATCACAGGGCCGATGTGGCCAGTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PWSQSPRGHAGWPSG*PSGTSQGRCGQSAC
Trigger: GCAAGCTGACTGGCCACATCGGCCCTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCCAGCATGACCTCGTGGTGACTGGCTCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp TTCCTCGGGGCTCTCAGCCTGCAGCCGCTCCCGCTTCCTCCGCAGTaGCTCCTGCAGGAGGAACAGCTCCTCCCTTTTCTTGATGAGCCG +
Preference number: 5 (lower is better)
Translates to: FLGALSLQPLPLPPQ*LLQEEQLLPFLDEP
Trigger: CGGCTCATCAAGAAAAGGGAGGAGCTGTTCCTCCTGCAGGAGGCACTGCGGAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp TGGCTGGCCGTCTGGGTGACCGTCAGGCACATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACAGGCTGGAACCTGCTAAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: WLAVWVTVRHITGPM*PVSLPTGWNLLSSQ
Trigger: CTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGATGTGCCTGACGGTCACCCAGACGGCCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCC +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQRSRSC*ALRITS
Trigger: GGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGCCGTCCGTGCACCCTaGGCTCCTCCAACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAAVRAP*APPTGE
Trigger: CTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCAGATGCGGACGGCATaGCCCGAGGCGGCGTACAGC +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQQMRTA*PEAAYS
Trigger: GCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCTG...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCTGGGCTGGGAGAAGCGGGGAGGCCAGCTCCTCGGAAGGGTGGGATGGGGCCATCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: AGLGEAGRPAPRKGGMGPSRSHF*MPLSRE
Trigger: CTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGA...TGGCCCCATCCCACCCTTCCGAGGAGCTGGCCTCCCCGCTTCTCCCAGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS GCA 90 bp CGCGACTGGTTCTTAAGCAGCCGGGCGTGCTCTTTCTGGGCGGCCTaGAGCTTCTGCAGGTCCCGGTTCATCTCCCGCAGCCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RDWFLSSRACSFWAA*SFCRSRFISRSLFS
Trigger: TGAGAAGAGGCTGCGGGAGATGAACCGGGACCTGCAGAAGCTGCAGGCCGCCCAGAAAGAGCACGCCCGGCTGCTTAAGAACCAGTCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp CTTCTCACGCAGGGCGTCCAGGAGCAGATGGTTCTGGGAGGAGCCTaGCATATCCGTCTGCCTCAGTCGGCCCTCCAACAGCCGGATCTG +
Preference number: 5 (lower is better)
Translates to: LLTQGVQEQMVLGGA*HIRLPQSALQQPDL
Trigger: CAGATCCGGCTGTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAACCATCTGCTCCTGGACGCCCTGCGTGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp GCCTCATTGCCATCGCCGGCCTTGGCTAGCAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACGCGGTTGTTGATGGCATCGATGGCC +
Preference number: 5 (lower is better)
Translates to: ASLPSPALASSRLAS*LMSWVTRLLMASMA
Trigger: GGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp GTGGCTTTAGTCCTGCACGCCCTGCCACCCGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAGAAACCTCCTGGGTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VALVLHALPPAQTWA*PGASVQKPPGSSSS
Trigger: TGAGGAGGAAGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGGCAGGGCGTGCAGGACTAAAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp GCACAGCCCAACTCACCGGCCTTGGCTAGCAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACGCGGTTGTTGATGGCATCGATGGCC +
Preference number: 5 (lower is better)
Translates to: AQPNSPALASSRLAS*LMSWVTRLLMASMA
Trigger: GGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGTGAGTTGGGCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp GGCAACAACCAGGGGATATGCCTGCTCCCAGCCCAGACCACATCGGGGGATGCCGCTCCTCCTCCGACGTaGCCATGTCAAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: GNNQGICLLPAQTTSGDAAPPPT*PCQSQC
Trigger: GCACTGGCTTTGACATGGCAACGTCGGAGGAGGAGC...GGCATCCCCCGATGTGGTCTGGGCTGGGAGCAGGCATATCCCCTGGTTGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp ACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTCCTGCTATCAGTCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TVQVPGDQHPRGSPSCYQSCARR*RSAMPP
Trigger: TGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGA...CTGATAGCAGGAAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTACCTTGTTCTTGATGTaGCGGGCCCGATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLTLFLM*RARLAY
Trigger: ATATGCCAATCGGGCCCGCAACATCAAGAACAAGGT...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLWFTTT*FLMLRA
Trigger: GGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCA...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGATCCTCCCGGGCCTGGGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: GDPPGPGPVKSACGTLPLSPKKW*ILRFHW
Trigger: CCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGA...CAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCCCAGGCCCGGGAGGATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCAGGACGGGTGCCATaGACAGTGGGCGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTAGRVP*TVGAGW
Trigger: CCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCAGGACGGGTGCCATaGACAGTGGGCGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPAGRVP*TVGAGW
Trigger: CCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGAGACTTGGTGATGTTCTaGGTGGAGATATCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRDLVMF*VEISSG
Trigger: CCCACTGGATATCTCCACCAAGAACATCACCAAGTC...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGCCGTCCGTGCACCCTaGGCTCCTCCAACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAAVRAP*APPTGE
Trigger: CTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp ACCGTCAGGTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGAGGCAGAGGATGGGCTaGGTGTGGCCTTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: TVRSLGWRTKWRGAGQLLRQRMG*VWPSAM
Trigger: CATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCT...CAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGACCTGACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS TCA 90 bp TGGCGCGGCCCTTTATGGCCAGGACTCGGCGAGGAAGGCAGGGGGTaGGTCCAGGGACGTAATTCCACAACTTTACCCGGCAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: WRGPLWPGLGEEGRG*VQGRNSTTLPGSHW
Trigger: CCAGTGACTGCCGGGTAAAGTTGTGGAATTACGTCCCTGGACTCACCCCCTGCCTTCCTCGCCGAGTCCTGGCCATAAAGGGCCGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS GCA 90 bp GCAATGCCCCCAAAGAGGTGTGCGATGGCCCTCGGGATGATGCCCTaGTCCTCCTCCGACGTTGCCATGTCAAAGCCAGTGCCCATGGTG +
Preference number: 5 (lower is better)
Translates to: AMPPKRCAMALGMMP*SSSDVAMSKPVPMV
Trigger: CACCATGGGCACTGGCTTTGACATGGCAACGTCGGAGGAGGAGCAGGGCATCATCCCGAGGGCCATCGCACACCTCTTTGGGGGCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp TTCCTCCGCTGCCTGACCTCCTTCTTCTTTAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACCTCCGAGGCATCCTCCATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FLRCLTSFFFSRSRS*LALRITSEASSMEL
Trigger: CAGCTCCATGGAGGATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCTAAAGAAGAAGGAGGTCAGGCAGCGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp GCGATCTCCCGGTTCCTCTTGGTCTCCACTAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTCATCAGGGCCACCTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AISRFLLVSTSRRRC*SSRICFIRATLAFF
Trigger: GAAGAAGGCCAAGGTGGCCCTGATGAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp CGAGACACTCGATGCCATCGTAGTGCGGGGGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCACACACTCGCCCAGCTCGAACATCT +
Preference number: 5 (lower is better)
Translates to: RDTRCHRSAGARSCE*GRWCPSHTRPARTS
Trigger: AGATGTTCGAGCTGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTCACAACTTCGAGCCCCCGCACTACGATGGCATCGAGTGTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSCARR*RSAMPP
Trigger: TGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGTTGCCATCGCCGGCCTaGGCTAGCAGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGLPSPA*ASSRLA
Trigger: GGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAA...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGC +
Preference number: 5 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPCVSRI*FCSRIS
Trigger: GCTGATTCTGCTGCAGAACAAGATCCGAGACACACA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAATCTCCCGGTTCCTCTaGGTCTCCACTAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTISRFL*VSTSRR
Trigger: GCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGAT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGAGTCCAGCTCCTCCTaGGTCTCCTCCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQESSSS*VSSSCT
Trigger: CGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACTC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTTTCCTTTTGTGCCACTaGCAGCCCCTTGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPFLLCH*QPLVNG
Trigger: TCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAA...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGAAGACATTGCGGTCATaGCGGGGCCGAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQKTLRS*RGRVGG
Trigger: CCCTCCCACTCGGCCCCGCAATGACCGCAATGTCTT...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAAGACATTGCGGTCATaGCGGGGCCGAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLKTLRS*RGRVGG
Trigger: CCCTCCCACTCGGCCCCGCAATGACCGCAATGTCTT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCAAGACATTGCGGTCATaGCGGGGCCGAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISKTLRS*RGRVGG
Trigger: CCCTCCCACTCGGCCCCGCAATGACCGCAATGTCTT...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGAGGCAGAGGATGGGCTaGGTGTGGCCTTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVRQRMG*VWPSAM
Trigger: CATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCT...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGTGTAAGGCTGCCCGGCACGGGTGCCAGGCCCCGGAACGGAGGAAGGCACTGGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: WCKAARHGCQAPERRKALAVKIC*ALVQMA
Trigger: TGCCATCTGCACCAATGCCAAGCATATCTTCACAGC...CAGTGCCTTCCTCCGTTCCGGGGCCTGGCACCCGTGCCGGGCAGCCTTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp TGTAGGGAACGTGCACCACCTTCTTGCTCTGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCAGCTGCCTCTTTGGCCCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: CRERAPPSCSGPLRR*SHCPRPAASLAPAA
Trigger: GGCTGCTGGGGCCAAAGAGGCAGCTGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACGTTCCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 90 bp CTCATGAGCTGGGTGACGCGGTTGTTGATGGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGCCGCAGGGCCCCATTCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LMSWVTRLLMASMAS*MAFTRSRRAPFSFC
Trigger: ACAGAAGGAGAATGGGGCCCTGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS-3UTR CAA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCGCTCCTCCTCCGACGTaGCCATGTCAAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QPGQDMIARKELVGRAGPAPPPT*PCQSQC
Trigger: GCACTGGCTTTGACATGGCAACGTCGGAGGAGGAGC...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGTCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMSCARR*RSAMPP
Trigger: TGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGA...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGCGTCCTCGTGGATCTaGATGTTGGACCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQASSWI*MLDLRW
Trigger: CCACCGCAGGTCCAACATCAAGATCCACGAGGACGC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGAAGGCGCTGATCACATaGCCCAAGGCCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRKALIT*PKASRP
Trigger: TGGCCTGCTGGCCTTGGGCAATGTGATCAGCGCCTT...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCACGTGCACCACCTTCTaGCTCTGGTCCCCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISTCTTF*LWSPKA
Trigger: CGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACGT...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGACGTGCACCACCTTCTaGCTCTGGTCCCCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGTCTTF*LWSPKA
Trigger: CGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACGT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPWVTRL*MASMAS
Trigger: GGAGGCCATCGATGCCATCAACAACCGCGTCACCCA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQWVTRL*MASMAS
Trigger: GGAGGCCATCGATGCCATCAACAACCGCGTCACCCA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGCTGGGTGACGCGGTaGTTGATGGCATCGATGGCC +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGSWVTR*LMASMA
Trigger: GGCCATCGATGCCATCAACAACCGCGTCACCCAGCT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGLASSR*ASWLMS
Trigger: GCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLASSR*ASWLMS
Trigger: GCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAACGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCC +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKRSRSC*ALRITS
Trigger: GGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCG...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCGGGGGTCAGGGTGCCGGGCTGTCCTCCCCATCCAAGCCACCTCCCAGCAGATCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: GGGQGAGLSSPSKPPPSRSISFC*ISISQV
Trigger: GACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGA...TCTGCTGGGAGGTGGCTTGGATGGGGAGGACAGCCCGGCACCCTGACCCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGC +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRSSYWC*SVCNRR
Trigger: GCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGC +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSSYWC*SVCNRR
Trigger: GCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCGCTCAGACATGGGCTaGGCCAGGCGCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNARSDMG*ARRLSA
Trigger: TGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATCCAGGGACTGCCACTaGAGCCTTGCCGCCTTACTG +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTSRDCH*SLAALL
Trigger: CAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GTGAGGCCACTCCCAGACCCACCGCTGTCCCTTCCCAAGGGGCTGAAGGTGGCAGGCTCGCTCTTGAACTaGAAATCGTCATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VRPLPDPPLSLPKGLKVAGSLLN*KSSWLV
Trigger: CACCAGCCATGACGATTTCAAGTTCAAGAGCGAGCC...TGCCACCTTCAGCCCCTTGGGAAGGGACAGCGGTGGGTCTGGGAGTGGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCCTAGTTTGGGCTCGCTCTaGAACTTGAAATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: HALCPQSSWPHRPGHSFPSLGSL*NLKSSW
Trigger: CCATGACGATTTCAAGTTCAAGAGCGAGCCCAAACT...AGGGAAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCAGCTCCGAGGAGGGCACGGGGAAGGGACCAGGCCTCACTCAGCCTCCACTGAGTTTGGGCTCGCTCTaGAACTTGAAATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: GSSEEGTGKGPGLTQPPLSLGSL*NLKSSW
Trigger: CCATGACGATTTCAAGTTCAAGAGCGAGCCCAAACT...CAGTGGAGGCTGAGTGAGGCCTGGTCCCTTCCCCGTGCCCTCCTCGGAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGCCCACTCCGTCCTCTTaGATCTCAACGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: EEICGHILELRGLPGTPGPTPSS*ISTREA
Trigger: GGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGGG...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACCCACTCCGTCCTCTTaGATCTCAACGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRPTPSS*ISTREA
Trigger: GGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGGG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGATGTGGCCAGTCAGCTaGCCGACAGGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRMWPVS*PTGWNL
Trigger: CAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACAT...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGATGTGGCCAGTCAGCTaGCCGACAGGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: EEICGHILELRGLPGTPGMWPVS*PTGWNL
Trigger: CAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACAT...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTGCGCACACCCAGTCCTaGTGCGCATTGGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLAHTQS*CALGIC
Trigger: GCAAATCCCCAATGCGCACAAGGACTGGGTGTGCGC...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGCGCACACCCAGTCCTaGTGCGCATTGGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPAHTQS*CALGIC
Trigger: GCAAATCCCCAATGCGCACAAGGACTGGGTGTGCGC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGACTGTCGTGGCCCTaGATCTCACCGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRRGLSWP*ISPMGV
Trigger: CACACCCATCGGTGAGATCAAGGGCCACGACAGTCC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGGACTGTCGTGGCCCTaGATCTCACCGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRGLSWP*ISPMGV
Trigger: CACACCCATCGGTGAGATCAAGGGCCACGACAGTCC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGAACTGTTGGGGCCAGTaGGGGCTATCTGCGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRNCWGQ*GLSAGC
Trigger: GCAACCCGCAGATAGCCCCAACTGGCCCCAACAGTT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAACTGTTGGGGCCAGTaGGGGCTATCTGCGGGTTGC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPNCWGQ*GLSAGC
Trigger: GCAACCCGCAGATAGCCCCAACTGGCCCCAACAGTT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCACGCCCTCTGTCCCCAGAGCAGCTGGCCCCATCGGCCGGGTCACAGCTTCCAACTCCCTCTTCCTaGATAATTTTCTGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: GPRPLSPEQLAPSAGSQLPTPSS*IIFCKG
Trigger: TCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGG...AAGCTGTGACCCGGCCGATGGGGCCAGCTGCTCTGGGGACAGAGGGCGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCGCTGTCATCAGACTaGTCCAGCGCTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSLSSD*SSADPW
Trigger: CCAGGGGTCAGCGCTGGACAAGTCTGATGACAGCGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTCGCTGTCATCAGACTaGTCCAGCGCTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRRSLSSD*SSADPW
Trigger: CCAGGGGTCAGCGCTGGACAAGTCTGATGACAGCGA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461742.7
CDS GCA 90 bp GTGGATGAGGCGAGAAGTGACGCCAGTGGTGTAGATGCCACCGTTTaGGTCCTCGTGGATCTTGATGTTGGACCTGCGGTGGCGGGTGTC +
Preference number: 5 (lower is better)
Translates to: VDEARSDASGVDATV*VLVDLDVGPAVAGV
Trigger: GACACCCGCCACCGCAGGTCCAACATCAAGATCCACGAGGACGCAAACGGTGGCATCTACACCACTGGCGTCACTTCTCGCCTCATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp GTCTGCAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAAGTCAGGTCGGCCAGGTCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: VCNRRWLFSSSSISF*LISISQVRSARSAW
Trigger: CCAGGCGGACCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp GGACGGGTGCCATTGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCACTGGCGCACGATGCTGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GRVPLTVGAGWSPKK*LILRFHWRTMLETE
Trigger: CTCTGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp CCTGCCATATCCGTCTGCCTCAGTCGGCCCTCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACTTGCAGCCCCTTGTCAATGGATGCC +
Preference number: 5 (lower is better)
Translates to: PAISVCLSRPSNSRI*ASFCATCSPLSMDA
Trigger: GGCATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAACTGGGCGCTGACTTaGAACTCAGGTCCAGCCACG +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLNWALT*NSGPAT
Trigger: CGTGGCTGGACCTGAGTTCAAAGTCAGCGCCCAGTT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGAACTGGGCGCTGACTTaGAACTCAGGTCCAGCCACG +
Preference number: 5 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVNWALT*NSGPAT
Trigger: CGTGGCTGGACCTGAGTTCAAAGTCAGCGCCCAGTT...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTCGTGGATCTTGATGTaGGACCTGCGGTGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: TVGASWGYLRVARGLRVSSWILM*DLRWRV
Trigger: CACCCGCCACCGCAGGTCCAACATCAAGATCCACGA...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAAGGCGCTGATCACATaGCCCAAGGCCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGKALIT*PKASRP
Trigger: TGGCCTGCTGGCCTTGGGCAATGTGATCAGCGCCTT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGCCGCAGTGCACTGATTaGCTGGCTGGTCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRRPQCTD*LAGLVL
Trigger: CAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGG...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CAAGGGCAGCCCCCTGTCCCAGACACAGGCACCCCCAATCTCACTTTGGACAGACCGCAGTGCACTGATTaGCTGGCTGGTCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: QGQPPVPDTGTPNLTLDRPQCTD*LAGLVL
Trigger: CAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGG...TCTGTCCAAAGTGAGATTGGGGGTGCCTGTGTCTGGGACAGGGGGCTGCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAAGCTGGGTGACGCGGTaGTTGATGGCATCGATGGCC +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASWVTR*LMASMA
Trigger: GGCCATCGATGCCATCAACAACCGCGTCACCCAGCT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGC +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASSYWC*SVCNRR
Trigger: GCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGATCTCCCGGTTCCTCTaGGTCTCCACTAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLISRFL*VSTSRR
Trigger: GCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGAT...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCATCTCCCGGTTCCTCTaGGTCTCCACTAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGISRFL*VSTSRR
Trigger: GCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGAT...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTCGCTCAGACATGGGCTaGGCCAGGCGCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIRSDMG*ARRLSA
Trigger: TGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCG...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGTCCAGGGACTGCCACTaGAGCCTTGCCGCCTTACTG +
Preference number: 5 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGSRDCH*SLAALL
Trigger: CAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGA...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGCCACTTGCAGCCCCTaGTCAATGGATGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTATCSP*SMDALR
Trigger: CCTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGC...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGACGAGAGAAGACATaGCGGTCATTGCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGRREKT*RSLRGR
Trigger: TCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTCT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAAGACGAGAGAAGACATaGCGGTCATTGCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRREKT*RSLRGR
Trigger: TCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTCT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCTGCAAGAGACGAGAGAAGACATaGCGGTCATTGCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: GASWGYLRVARGLRVSCKRREKT*RSLRGR
Trigger: TCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTCT...CTTGCAGCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCAGGCAGAGGATGGGCTaGGTGTGGCCTTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNARQRMG*VWPSAM
Trigger: CATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCT...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGAGTCCGAATGCACTaGGCTGAGTCCCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLRVRMH*AESRMS
Trigger: GGACATCCGGGACTCAGCCAAGTGCATTCGGACTCT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAAGAGTCCGAATGCACTaGGCTGAGTCCCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRVRMH*AESRMS
Trigger: GGACATCCGGGACTCAGCCAAGTGCATTCGGACTCT...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGCAGATGCGGACGGCATaGCCCGAGGCGGCGTACAGC +
Preference number: 5 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKQMRTA*PEAAYS
Trigger: GCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCTG...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGGCGCACACCCAGTCCTaGTGCGCATTGGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRAHTQS*CALGIC
Trigger: GCAAATCCCCAATGCGCACAAGGACTGGGTGTGCGC...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCATCCACGTTCCAGACCTaGATGACACCCGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGASTFQT*MTPARQ
Trigger: CTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGA...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPLVQMA*MGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGTTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRLVQMA*MGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAA...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTTCTAGCAGCTCCACCTaGGCCCCATCCAAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLSSSST*APSKRD
Trigger: GTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAGA...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGTGTCTCATGGATGTaGGGCTCAGGGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQGVSWM*GSGLLK
Trigger: CTTCAGGAGCCCTGAGCCCAACATCCATGAGACACC...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp GTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCGAGAGCAGCAAGCAGTaGCCTGTTTGGGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: VTGVEDKVEGCRSALAVGESSKQ*PVWDGK
Trigger: TTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTC...GCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS TCA 90 bp GCAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCAGGTCGGCCAGGTCCGCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: ATAAGCSPARRSASA*FRSHKSGRPGPPGS
Trigger: ACTTCCAGGCGGACCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp GTCATTCTCTGCATGACGATGTCAATGATCCGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCCTTACTGAAGCTCTGGCTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: VILCMTMSMIRRSRD*HLSLAALLKLWLAP
Trigger: GGGGGCCAGCCAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACGGATCATTGACATCGTCATGCAGAGAATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp TGGAGCACTAGCTCCAAGGGGAGTGCTGGGCAATGCCCAGGAGCATaGTCACCGCCTTATACTCCATCAGCTCCATCTGCAGCCGAGCAA +
Preference number: 5 (lower is better)
Translates to: WSTSSKGSAGQCPGA*SPPYTPSAPSAAEQ
Trigger: TTGCTCGGCTGCAGATGGAGCTGATGGAGTATAAGGCGGTGAGCATGCTCCTGGGCATTGCCCAGCACTCCCCTTGGAGCTAGTGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 90 bp ATGCCACCGTTTGCGTCCTCGTGGATCTTGATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGGGTGCTGTCAAACAGGTCAAGGATC +
Preference number: 5 (lower is better)
Translates to: MPPFASSWILMLDLR*RVSGSRVLSNRSRI
Trigger: GATCCTTGACCTGTTTGACAGCACCCGTGACCCTGACACCCGCCACCGCAGGTCCAACATCAAGATCCACGAGGACGCAAACGGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp AACTTCTTTCGGGCAGGACGGGTGCCATTGACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTGATTTTGCGGTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: NFFRAGRVPLTVGAG*SPKKWLILRFHWRT
Trigger: CGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGCCCGAAAGAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGCTCCTCCTCCGACGTaGCCATGTCAAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAAPPPT*PCQSQC
Trigger: GCACTGGCTTTGACATGGCAACGTCGGAGGAGGAGC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAAACTGGGCGCTGACTTaGAACTCAGGTCCAGCCACG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGANWALT*NSGPAT
Trigger: CGTGGCTGGACCTGAGTTCAAAGTCAGCGCCCAGTT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGCGTCCTCGTGGATCTaGATGTTGGACCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAASSWI*MLDLRW
Trigger: CCACCGCAGGTCCAACATCAAGATCCACGAGGACGC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTTCATCAGGGCCACCTaGGCCTTCTTCATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGFIRAT*AFFISA
Trigger: GGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGAA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACATTCATCAGGGCCACCTaGGCCTTCTTCATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTFIRAT*AFFISA
Trigger: GGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGAA...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGAGTCCAGCTCCTCCTaGGTCTCCTCCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTESSSS*VSSSCT
Trigger: CGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACTC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGAGTCCAGCTCCTCCTaGGTCTCCTCCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGESSSS*VSSSCT
Trigger: CGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACTC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTCTCTGTGGCTCGAGATaGCCTAGGGAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGLCGSR*PRESAA
Trigger: GGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGAG...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGGGGAGATGATGCCCTaGTCCAGCGCTGACCCCTGG +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKGEMMP*SSADPW
Trigger: CCAGGGGTCAGCGCTGGACAAGGGCATCATCTCCCC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAATGGAGACCACGTTGTaGGGGTGGCCCTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTMETTL*GWPFRA
Trigger: AGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCAT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGAGTCCGAATGCACTaGGCTGAGTCCCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRRVRMH*AESRMS
Trigger: GGACATCCGGGACTCAGCCAAGTGCATTCGGACTCT...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCAGATGCGGACGGCATaGCCCGAGGCGGCGTACAGC +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGQMRTA*PEAAYS
Trigger: GCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCTG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGCAGTCCTTGTGCGCATaGGGGATTTGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVQSLCA*GICWMS
Trigger: GCTCATCCAGCAAATCCCCAATGCGCACAAGGACTG...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTCTAGCAGCTCCACCTaGGCCCCATCCAAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSSSST*APSKRD
Trigger: GTCCCTTTTGGATGGGGCCAAGGTGGAGCTGCTAGA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAGGCAGCGGACTCCCTTaGGGATTTCTGGCCCCCAAG +
Preference number: 5 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGGSGLP*GFLAPK
Trigger: CTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGCC...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp TGTCATCAGACTTGTCCAGCGCTGACCCCTGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGCGGTCATTGCGGGGCCGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: CHQTCPALTPGSDYW*DERRHCGHCGAEWE
Trigger: CTCCCACTCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGTCTGATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422435.2
ENST00000461742.7
CDS TCA 90 bp GAGGAGTCGCTGTCATCAGACTTGTCCAGCGCTGACCCCTGGCTCTaGTTACTGGTGAGACGAGAGAAGACATTGCGGTCATTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: EESLSSDLSSADPWL*LLVRREKTLRSLRG
Trigger: GCCCCGCAATGACCGCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGTCTGATGACAGCGACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp ATGCCCAGGAGCATGCTCACCGCCTTATACTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MPRSMLTALYSISSI*SRAISARSALICWL
Trigger: CAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGAGTATAAGGCGGTGAGCATGCTCCTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 90 bp AGGCCCTCTCTGACCATCCATGCAAGTAAGGCCAACTCTCTCCTCTaGCCCTCTGCAGCACACTGGATACTCCTGTGGGCCCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: RPSLTIHASKANSLL*PSAAHWILLWAPLS
Trigger: TGATAGAGGGGCCCACAGGAGTATCCAGTGTGCTGCAGAGGGGCAGAGGAGAGAGTTGGCCTTACTTGCATGGATGGTCAGAGAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 90 bp AGCCCCGAGTGGCTGCAGTACTTGATGGAGACCACGTTGTTGGGGTaGCCCTTTAGAGCTGCGATCTCCTGTCCCGTAACCAAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: SPEWLQYLMETTLLG*PFRAAISCPVTKFH
Trigger: GTGGAACTTGGTTACGGGACAGGAGATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAAGTACTGCAGCCACTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGCCCGATTGGCATATTaGAGTGTGTTGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGARLAY*SVLRVS
Trigger: GGAGACCCTCAACACACTCAAATATGCCAATCGGGC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGACTACCACCTTGTTCTaGATGTTGCGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRRTTTLF*MLRARL
Trigger: CAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGT...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACC +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGICWLV*SWFTTT
Trigger: GGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAAT...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACC +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRICWLV*SWFTTT
Trigger: GGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAAT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAATGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKWVTRL*MASMAS
Trigger: GGAGGCCATCGATGCCATCAACAACCGCGTCACCCA...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAAGCTGGGTGACGCGGTaGTTGATGGCATCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKSWVTR*LMASMA
Trigger: GGCCATCGATGCCATCAACAACCGCGTCACCCAGCT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTLASSR*ASWLMS
Trigger: GCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCC +
Preference number: 5 (lower is better)
Translates to: VADPSETAENGHDDEHLSRSRSC*ALRITS
Trigger: GGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCG...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCGCTCAGACATGGGCTaGGCCAGGCGCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGRSDMG*ARRLSA
Trigger: TGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTCCCTTCCCAAGGGGCTGAAGGTGGCACTCTGACCACCTCAAAGGCTTGGGTGTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: VPSQGAEGGTLTTSKAWVSPKKW*ILRFHW
Trigger: CCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGA...CACCCAAGCCTTTGAGGTGGTCAGAGTGCCACCTTCAGCCCCTTGGGAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGSPKKW*ILRFHW
Trigger: CCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGA...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSPKKW*ILRFHW
Trigger: CCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GAAGAGATTTGTGGCCACATCTTAGAGCTAAGGGGGTTGCCCGGCACCCCCGGGAGCTCCTCCCTTTTCTaGATGAGCCGCTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: EEICGHILELRGLPGTPGSSSLF*MSRSMS
Trigger: TGACATGGAGCGGCTCATCAAGAAAAGGGAGGAGCT...CCCGGGGGTGCCGGGCAACCCCCTTAGCTCTAAGATGTGGCCACAAATCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLDALRK*SSRRRA
Trigger: AGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATC...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCGCCACTTGCAGCCCCTaGTCAATGGATGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAATCSP*SMDALR
Trigger: CCTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGC...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGCTCGCTCTTGAACTaGAAATCGTCATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPGSLLN*KSSWLV
Trigger: CACCAGCCATGACGATTTCAAGTTCAAGAGCGAGCC...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCGGCTCGCTCTTGAACTaGAAATCGTCATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISGSLLN*KSSWLV
Trigger: CACCAGCCATGACGATTTCAAGTTCAAGAGCGAGCC...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACGACACAGCTTTCATTaGGGCAGACAGTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPRHSFH*GRQFGL
Trigger: GAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTCG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACACGACACAGCTTTCATTaGGGCAGACAGTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTRHSFH*GRQFGL
Trigger: GAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTCG...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGTTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRRLMETT*LGWPFR
Trigger: TCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAA...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRLMETT*LGWPFR
Trigger: TCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGAGTGGCTGCAGTACTaGATGGAGACCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGSAGDNVATTARRGTRREWLQY*METTLL
Trigger: CAACAACGTGGTCTCCATCAAGTACTGCAGCCACTC...CCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAATGTGGCCAGTCAGCTaGCCGACAGGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTMWPVS*PTGWNL
Trigger: CAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACAT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGTCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GPVPLFMLGKGRWVQEGQSRSHF*MPLSRE
Trigger: CTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGA...CTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGTCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRSRSHF*MPLSRE
Trigger: CTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGA...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATCCACGTTCCAGACCTaGATGACACCCGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSTFQT*MTPARQ
Trigger: CTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLVQMA*MGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp ATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGTCCCACTGTTCATGCTaGGAAAAGGACGGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: ISWGLSHCSCLEKDGGCRSHCSC*EKDGGC
Trigger: GCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGA...CCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCGGTGTCTCATGGATGTaGGGCTCAGGGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGGVSWM*GSGLLK
Trigger: CTTCAGGAGCCCTGAGCCCAACATCCATGAGACACC...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGCCTGGGCAGGACATGATTGCTAGAAAAGAGTTGGTGGGCAGGGCAGGGCCCCAAGCAGTTGCCTGTTaGGGATGGCAAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: QPGQDMIARKELVGRAGPQAVAC*GWQRDT
Trigger: TGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTG...GGGCCCTGCCCTGCCCACCAACTCTTTTCTAGCAATCATGTCCTGCCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCACTGCAAAATCTGTCCTaGCACACAAGAGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPLQNLS*HTRGQG
Trigger: TCCCTGCCCTCTTGTGTGCAAGGACAGATTTTGCAG...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp GATGATGGTAATAGGGAGGTGGGAGGGATGCTGAGGAAGTTAGGGTaGGGCTGCAGGGCAGAGGGTGCATATGGAGCACTAGCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: DDGNREVGGMLRKLG*GCRAEGAYGALAPR
Trigger: CCTTGGAGCTAGTGCTCCATATGCACCCTCTGCCCTGCAGCCTCACCCTAACTTCCTCAGCATCCCTCCCACCTCCCTATTACCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 90 bp TCTCCTATCACTCGCTTGCCCGCCTTATACTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPITRLPALYSISSI*SRAISARSALICWL
Trigger: CAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGAGTATAAGGCGGGCAAGCGAGTGATAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp AGAGGGTGCATATGGAGCACTAGCTCCAAGGGGAGTGCTGGGCAATaGCCAGGAGCATGCTCACCGCCTTATACTCCATCAGCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RGCIWSTSSKGSAGQ*PGACSPPYTPSAPS
Trigger: AGATGGAGCTGATGGAGTATAAGGCGGTGAGCATGCTCCTGGGCATTGCCCAGCACTCCCCTTGGAGCTAGTGCTCCATATGCACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 90 bp AGGCCAGCTGCCTCTTTGGCCCCAGCAGCCCTCTTGCTCCTTGGGTaGGTTTATAGGCACATGGATAAGTTGGTGAAATGGGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPAASLAPAALLLLG*VYRHMDKLVKWGSW
Trigger: CCAGCTTCCCCATTTCACCAACTTATCCATGTGCCTATAAACCCACCCAAGGAGCAAGAGGGCTGCTGGGGCCAAAGAGGCAGCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 90 bp AACTATGAATTGACTGGCTGGCTTAGTCCACCTGATACTCTGGGGTaGATGTCGGGGGAGGGAGTCCTAGCCCGTTGGTGCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: NYELTGWLSPPDTLG*MSGEGVLARWCSDL
Trigger: CAGGTCAGAGCACCAACGGGCTAGGACTCCCTCCCCCGACATCCACCCCAGAGTATCAGGTGGACTAAGCCAGCCAGTCAATTCATAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAATCCTGACGGCCACCTaGACGCAGCAGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSILTAT*TQQSPW
Trigger: CCAGGGGGACTGCTGCGTCAAGGTGGCCGTCAGGAT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGGCGTCCTCGTGGATCTaGATGTTGGACCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWASSWI*MLDLRW
Trigger: CCACCGCAGGTCCAACATCAAGATCCACGAGGACGC...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAACCTTGTTCTTGATGTaGCGGGCCCGATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTTLFLM*RARLAY
Trigger: ATATGCCAATCGGGCCCGCAACATCAAGAACAAGGT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCC +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSRSRSC*ALRITS
Trigger: GGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCG...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGAGAAAGGGGCAGAGCCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCATGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGC +
Preference number: 5 (lower is better)
Translates to: PEKGAEPVQQETMWPRLPCVSRI*FCSRIS
Trigger: GCTGATTCTGCTGCAGAACAAGATCCGAGACACACA...TGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGGCTCTGCCCCTTTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAKKWLI*RFHWRT
Trigger: CGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAATCCAGGGACTGCCACTaGAGCCTTGCCGCCTTACTG +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKSRDCH*SLAALL
Trigger: CAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGA...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTAGCTCCTCCCTTTTCTaGATGAGCCGCTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGSSSLF*MSRSMS
Trigger: TGACATGGAGCGGCTCATCAAGAAAAGGGAGGAGCT...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCCAGAGGGTTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTATTTGGGCAGACAGTTaGGGCTCGCTCTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: ARGLRVSCKAQPPTPGFLIWADS*GSLLNL
Trigger: CAAGTTCAAGAGCGAGCCCAAACTGTCTGCCCAAAT...AAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAACCCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGTTCAGCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGGACTTGGTGATGTTCTaGGTGGAGATATCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PVQQETMWPRLPGGEQEGDLVMF*VEISSG
Trigger: CCCACTGGATATCTCCACCAAGAACATCACCAAGTC...CCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGCTGAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTTGCAGCTTCGGTCTTaGGACCCTGTGAATAGCAAC +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISLQLRS*DPVNSN
Trigger: GTTGCTATTCACAGGGTCCAAAGACCGAAGCTGCAA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAACCAAGTTCCACATCTaGCAGCTTCGGTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: GACPTVHAWKRTVGAGGTTKFHI*QLRSLD
Trigger: GTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGGT...TGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGAGTGGCTGCAGTACTaGATGGAGACCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGEWLQY*METTLL
Trigger: CAACAACGTGGTCTCCATCAAGTACTGCAGCCACTC...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAAGAGTCCGAATGCACTaGGCTGAGTCCCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTRVRMH*AESRMS
Trigger: GGACATCCGGGACTCAGCCAAGTGCATTCGGACTCT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGCAGTCCTTGTGCGCATaGGGGATTTGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLQSLCA*GICWMS
Trigger: GCTCATCCAGCAAATCCCCAATGCGCACAAGGACTG...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGCGCACACCCAGTCCTaGTGCGCATTGGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFAHTQS*CALGIC
Trigger: GCAAATCCCCAATGCGCACAAGGACTGGGTGTGCGC...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAPMGVK*STFQTL
Trigger: CAAGGTCTGGAACGTGGACAACTTCACACCCATCGG...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLSSLPAGPCHCAQITTILVQMA*MGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAA...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGACAGGGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: GLSHCSCLEKDGGCRRDRAVKIC*ALVQMA
Trigger: TGCCATCTGCACCAATGCCAAGCATATCTTCACAGC...CCTGTCCCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTGGCAGCGGACTCCCTTaGGGATTTCTGGCCCCCAAG +
Preference number: 5 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFGSGLP*GFLAPK
Trigger: CTTGGGGGCCAGAAATCCCAAAGGGAGTCCGCTGCC...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGTGCAAGAACACGCCTaGCAGCTACAGTGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLVQEHA*QLQCSH
Trigger: GTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCAC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTACCCCCAATCTCACTTaGGACAGAGCCAACGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLSSLPAGPCHCAQITTITPNLT*DRANVG
Trigger: CCCCACGTTGGCTCTGTCCAAAGTGAGATTGGGGGT...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACCCCCAATCTCACTTaGGACAGAGCCAACGTGGGG +
Preference number: 5 (lower is better)
Translates to: LTQETGNQSKLFRLTRARTPNLT*DRANVG
Trigger: CCCCACGTTGGCTCTGTCCAAAGTGAGATTGGGGGT...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCCTCCATGCGCTGCCTTaGAGAGTTCTGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGLHALP*RVLAAS
Trigger: TGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAG...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GTCACTGGGGTGGAGGACAAAGTGGAGGGGTGCCGGTCAGCTCTTGCAGTGGGCTTTCCCCATGTGGTTTaGTGCTTTAAACTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: VTGVEDKVEGCRSALAVGFPHVV*CFKLPS
Trigger: AGAGGGCAGTTTAAAGCACAAAACCACATGGGGAAA...GCCCACTGCAAGAGCTGACCGGCACCCCTCCACTTTGTCCTCCACCCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGCAAGCAGTTGCCTGTTaGGGATGGCAAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGQAVAC*GWQRDT
Trigger: TGTGTCCCTTTGCCATCCCAAACAGGCAACTGCTTG...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS GCA 90 bp TTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTTGAGCGTCTaGAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FCSRISFSSYWCLSV*NRRWLFSSSSISFC
Trigger: GCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp TCTCGGATCTTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: SRILFCSRISFSSYW*LSVCNRRWLFSSSS
Trigger: CGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 90 bp TGCAGCACACGGTCGCGCTCCAGCTGTGTGTCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCCTCATACTGGTGCTTGAGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: CSTRSRSSCVSRILF*SRISFSSYWCLSVC
Trigger: GCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACCGTGTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp GCAATCTCAGCCCGCAGTGCACTGATTTGCTGGCTGGTCTTGTCCTaGTTCACTACCACCTTGTTCTTGATGTTGCGGGCCCGATTGGCA +
Preference number: 5 (lower is better)
Translates to: AISARSALICWLVLS*FTTTLFLMLRARLA
Trigger: TGCCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CCA 90 bp GTGTCTCGGATCTTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: VSRILFCSRISFSSY*CLSVCNRRWLFSSS
Trigger: CGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp CATGCAAGTAAGGCCAACTCTCTCCTCTGCCCCTCTGCAGCACACTaGATACTCCTGTGGGCCCCTCTATCAACGATTCTGTGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: HASKANSLLCPSAAH*ILLWAPLSTILCQS
Trigger: AGACTGGCACAGAATCGTTGATAGAGGGGCCCACAGGAGTATCCAGTGTGCTGCAGAGGGGCAGAGGAGAGAGTTGGCCTTACTTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp ACTGTTGGGGCCAGTTGGGGCTATCTGCGGGTTGCCAGAGGGTTAAGGGTTAGCGGAATAGATCTGTTCTaGCCAGGTGTCCAGGTCGAA +
Preference number: 5 (lower is better)
Translates to: TVGASWGYLRVARGLRVSGIDLF*PGVQVE
Trigger: TTCGACCTGGACACCTGGCAAGAACAGATCTATTCC...GCTAACCCTTAACCCTCTGGCAACCCGCAGATAGCCCCAACTGGCCCCAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGACTACCACCTTGTTCTaGATGTTGCGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: APRLKREAQDQRCNGKTGTTTLF*MLRARL
Trigger: CAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGT...CCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCTGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAWFTTT*FLMLRA
Trigger: GGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCA...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTTGCCATCGCCGGCCTaGGCTAGCAGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSLPSPA*ASSRLA
Trigger: GGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CACCCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTTGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGC +
Preference number: 5 (lower is better)
Translates to: HPSPGACPTVHAWKRTVGCVSRI*FCSRIS
Trigger: GCTGATTCTGCTGCAGAACAAGATCCGAGACACACA...ACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAATTCATCAGGGCCACCTaGGCCTTCTTCATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKFIRAT*AFFISA
Trigger: GGCTGAGATGAAGAAGGCCAAGGTGGCCCTGATGAA...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCAGGAGACAATGTGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: AGDNVATTARRGTRRDNAKKWLI*RFHWRT
Trigger: CGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTT...GGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCACATTGTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAATGTCAGCCTCCAGGTaGACAATGGTCATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAMSASR*TMVILC
Trigger: GCAGAGAATGACCATTGTCAACCTGGAGGCTGACAT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAGCCACTTGCAGCCCCTaGTCAATGGATGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKATCSP*SMDALR
Trigger: CCTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGC...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGGGTGGGGGTGGGGTTCCTTTTGTGCCACTaGCAGCCCCTTGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: KTSDATEKQGGQLWVGVGFLLCH*QPLVNG
Trigger: TCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAA...CCCCACCCCCACCCAAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAATTTGGGCAGACAGTTaGGGCTCGCTCTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGAIWADS*GSLLNL
Trigger: CAAGTTCAAGAGCGAGCCCAAACTGTCTGCCCAAAT...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCATCTCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGACTTGGTGATGTTCTaGGTGGAGATATCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PSPGACPTVHAWKRTVGADLVMF*VEISSG
Trigger: CCCACTGGATATCTCCACCAAGAACATCACCAAGTC...TGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAAGACGAGAGAAGACATaGCGGTCATTGCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKRREKT*RSLRGR
Trigger: TCGGCCCCGCAATGACCGCAATGTCTTCTCTCGTCT...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCCGTCCGTGCACCCTaGGCTCCTCCAACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKAVRAP*APPTGE
Trigger: CTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGATGTGGCCAGTCAGCTaGCCGACAGGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: ADPSETAENGHDDEHLSQMWPVS*PTGWNL
Trigger: CAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACAT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTTCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: QSKLFRLTRARTQPELRRSRSHF*MPLSRE
Trigger: CTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGA...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTCTGCAAAATCTGTCCTaGCACACAAGAGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: QSKLFRLTRARTQPELRRLQNLS*HTRGQG
Trigger: TCCCTGCCCTCTTGTGTGCAAGGACAGATTTTGCAG...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp GGATCTTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATCA +
Preference number: 5 (lower is better)
Translates to: GSCSAAESAFPHTGA*ASATAAGCSPARRS
Trigger: TGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCAACTGGGCGCTGACTTaGAACTCAGGTCCAGCCACG +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGNWALT*NSGPAT
Trigger: CGTGGCTGGACCTGAGTTCAAAGTCAGCGCCCAGTT...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAAAGGCGCTGATCACATaGCCCAAGGCCAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSKALIT*PKASRP
Trigger: TGGCCTGCTGGCCTTGGGCAATGTGATCAGCGCCTT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGACTCAGCCTGAACTCAGGCGTACCTTGTTCTTGATGTaGCGGGCCCGATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: QSKLFRLTRARTQPELRRTLFLM*RARLAY
Trigger: ATATGCCAATCGGGCCCGCAACATCAAGAACAAGGT...ACGCCTGAGTTCAGGCTGAGTCCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCCGCAGTGCACTGATTaGCTGGCTGGTCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGPQCTD*LAGLVL
Trigger: CAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGTGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VADPSETAENGHDDEHLSWVTRL*MASMAS
Trigger: GGAGGCCATCGATGCCATCAACAACCGCGTCACCCA...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCGTTTTGTCCAGGCCTGAAGGCTCCCCCTTCTGCTCCCTGGCACCCATCTCCTCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: FVLSRPEGSPFCSLAPISSISFC*ISISQV
Trigger: GACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGA...GGAGATGGGTGCCAGGGAGCAGAAGGGGGAGCCTTCAGGCCTGGACAAAACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGC +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSSSYWC*SVCNRR
Trigger: GCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCTGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGC +
Preference number: 5 (lower is better)
Translates to: QTEAGSTRPAMQRKNRVGCVSRI*FCSRIS
Trigger: GCTGATTCTGCTGCAGAACAAGATCCGAGACACACA...GCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTKKWLI*RFHWRT
Trigger: CGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAAGCTCCTCCCTTTTCTaGATGAGCCGCTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTSSSLF*MSRSMS
Trigger: TGACATGGAGCGGCTCATCAAGAAAAGGGAGGAGCT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGGCTCGCTCTTGAACTaGAAATCGTCATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTGSLLN*KSSWLV
Trigger: CACCAGCCATGACGATTTCAAGTTCAAGAGCGAGCC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGCAAGGGAGGGCCTGCGCTCCATGCCAGTTTTAAGGCCGAAAATGTGTCTCCTCGACACAGCTTTCATTaGGGCAGACAGTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: CKGGPALHASFKAENVSPRHSFH*GRQFGL
Trigger: GAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTCG...AGGAGACACATTTTCGGCCTTAAAACTGGCATGGAGCGCAGGCCCTCCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCTCTGTGGCTCGAGATaGCCTAGGGAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGLCGSR*PRESAA
Trigger: GGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGAG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TTAAGGGTTAGCTGCAAGGCCCAGCCGCCCACACCTGGTTTCCTTAGCTACCTGTTGCAGCTTCGGTCTTaGGACCCTGTGAATAGCAAC +
Preference number: 5 (lower is better)
Translates to: LRVSCKAQPPTPGFLSYLLQLRS*DPVNSN
Trigger: GTTGCTATTCACAGGGTCCAAAGACCGAAGCTGCAA...CAGGTAGCTAAGGAAACCAGGTGTGGGCGGCTGGGCCTTGCAGCTAACCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAATTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKLMETT*LGWPFR
Trigger: TCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAA...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGGAGTGGCTGCAGTACTaGATGGAGACCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTQETGNQSKLFRLTRAREWLQY*METTLL
Trigger: CAACAACGTGGTCTCCATCAAGTACTGCAGCCACTC...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATCCACGTTCCAGACCTaGATGACACCCGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSSTFQT*MTPARQ
Trigger: CTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTCCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFPMGVK*STFQTL
Trigger: CAAGGTCTGGAACGTGGACAACTTCACACCCATCGG...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGAAGATATGCTTGGCATaGGTGCAGATGGCATTGATG +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRKICLA*VQMALM
Trigger: CATCAATGCCATCTGCACCAATGCCAAGCATATCTT...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTGTGCAAGAACACGCCTaGCAGCTACAGTGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: DEHLSQGHKITLRARTRLVQEHA*QLQCSH
Trigger: GTGACTGCACTGTAGCTGCAAGGCGTGTTCTTGCAC...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGACAACATTTAGGGTGCTaGTGCAGTGAGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGQHLGC*CSEWSW
Trigger: CCAGCTCCACTCACTGCACAAGCACCCTAAATGTTG...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTGACCCAGGAGACTGGGAATCAGTCCAAGCTCTTCAGGCTCACTAGGGCTAGGTGCGGGACCCTGCCATaGTGCTCAAATCACAACCAT +
Preference number: 5 (lower is better)
Translates to: LTQETGNQSKLFRLTRARCGTLP*CSNHNH
Trigger: ATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCA...CCTAGCCCTAGTGAGCCTGAAGAGCTTGGACTGATTCCCAGTCTCCTGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS GCA 90 bp CTTCTGCAGGTCCCGGTTCATCTCCCGCAGCCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTTCTCCTCAGTATAGCACTCCATGGT +
Preference number: 5 (lower is better)
Translates to: LLQVPVHLPQPLLIV*LDLVGLLLSIALHG
Trigger: ACCATGGAGTGCTATACTGAGGAGAAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGGCTGCGGGAGATGAACCGGGACCTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 90 bp TCCATCTGCAGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTCACTACCACCTTGTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SICSRAISARSALIC*LVLSWFTTTLFLML
Trigger: CAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CCA 90 bp ATCAGCTTTTCCTCATACTGGTGCTTGAGCGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTTGATTTCGATC +
Preference number: 5 (lower is better)
Translates to: ISFSSYWCLSVCNRR*LFSSSSISFCLISI
Trigger: GATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAATCCTGACGGCCACCTaGACGCAGCAGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGILTAT*TQQSPW
Trigger: CCAGGGGGACTGCTGCGTCAAGGTGGCCGTCAGGAT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGCGTCCTCGTGGATCTaGATGTTGGACCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSASSWI*MLDLRW
Trigger: CCACCGCAGGTCCAACATCAAGATCCACGAGGACGC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCTGGGGCCTGTCCCACTGTTCATGCTTGGAAAAGGACGGTGGGTGCAGGAGGGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: SWGLSHCSCLEKDGGCRRAYLSV*RVSMKS
Trigger: AGATTTCATGGAGACCCTCAACACACTCAAATATGC...CCTCCTGCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGACAGGCCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CTCTTGGCTCCCAGACTGAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACCTTGTTCTTGATGTaGCGGGCCCGATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: LLAPRLKREAQDQRCNGKTLFLM*RARLAY
Trigger: ATATGCCAATCGGGCCCGCAACATCAAGAACAAGGT...TTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTCAGTCTGGGAGCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGATTGCCATCGCCGGCCTaGGCTAGCAGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGLPSPA*ASSRLA
Trigger: GGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAA...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACGCTCAGACATGGGCTaGGCCAGGCGCCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGRSDMG*ARRLSA
Trigger: TGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTCCAGGGACTGCCACTaGAGCCTTGCCGCCTTACTG +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSRDCH*SLAALL
Trigger: CAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAATGTCAGCCTCCAGGTaGACAATGGTCATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTMSASR*TMVILC
Trigger: GCAGAGAATGACCATTGTCAACCTGGAGGCTGACAT...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACATTGCAGCTTCGGTCTTaGGACCCTGTGAATAGCAAC +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTLQLRS*DPVNSN
Trigger: GTTGCTATTCACAGGGTCCAAAGACCGAAGCTGCAA...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTATGGAGACCACGTTGTaGGGGTGGCCCTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFMETTL*GWPFRA
Trigger: AGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCAT...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAATTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGA +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKLMETT*LGWPFR
Trigger: TCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAA...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TGGCCACGACTGCCAGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: WPRLPGGEQEGIMPFGFTAVKIC*ALVQMA
Trigger: TGCCATCTGCACCAATGCCAAGCATATCTTCACAGC...TGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCTGGCAGTCGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAGGTGCCGGTCAGCTCTaGCAGTGGGCTTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKGAGQL*QWAWLA
Trigger: AGCCAGCCAAGCCCACTGCAAGAGCTGACCGGCACC...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp CTAGCAGGGCAAAGAAGTGTTATGTTCCCTAACGTCACTGCAGCCACCTGCTGGCCCCTAACATGGACCTaGGACATCCCTGAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: LAGQRSVMFPNVTAATCWPLTWT*DIPERV
Trigger: CACTCTTTCAGGGATGTCCAAGGTCCATGTTAGGGG...CCAGCAGGTGGCTGCAGTGACGTTAGGGAACATAACACTTCTTTGCCCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCCTCCATGCGCTGCCTTaGAGAGTTCTGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGLHALP*RVLAAS
Trigger: TGAAGCAGCCAGAACTCTCAAAGGCAGCGCATGGAG...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GACGGAGAGGAGCCAAGGGCAGAAACACAGAACCACCTCTGGAAAGTCCAAAAGGAGAGCAGCAAGCAGTaGCCTGTTTGGGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: DGEEPRAETQNHLWKVQKESSKQ*PVWDGK
Trigger: TTTGCCATCCCAAACAGGCAACTGCTTGCTGCTCTC...CTTTTGGACTTTCCAGAGGTGGTTCTGTGTTTCTGCCCTTGGCTCCTCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTATCCTGACGGCCACCTaGACGCAGCAGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTILTAT*TQQSPW
Trigger: CCAGGGGGACTGCTGCGTCAAGGTGGCCGTCAGGAT...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGATCTCCCGGTTCCTCTaGGTCTCCACTAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RVSIACKQSCGRILSYRLISRFL*VSTSRR
Trigger: GCGGCGGCTAGTGGAGACCAAGAGGAACCGGGAGAT...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGAGTCCAGCTCCTCCTaGGTCTCCTCCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNESSSS*VSSSCT
Trigger: CGTGCAGCTGGAGGAGACCAAGGAGGAGCTGGACTC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCGCCACTTGCAGCCCCTaGTCAATGGATGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSATCSP*SMDALR
Trigger: CCTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGC...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GATGAGCACCTCTCGCAGGGCCATAAGATCACACTTCGTGCAAGAACACGCCTTTTCCTTTTGTGCCACTaGCAGCCCCTTGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: DEHLSQGHKITLRARTRLFLLCH*QPLVNG
Trigger: TCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAA...AAGGCGTGTTCTTGCACGAAGTGTGATCTTATGGCCCTGCGAGAGGTGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAAGTTTGGGCTCGCTCTaGAACTTGAAATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGSLGSL*NLKSSW
Trigger: CCATGACGATTTCAAGTTCAAGAGCGAGCCCAAACT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTTTCTTACAGGTTGCAAGGTCAAAACTTTCTGTTCAGGTTGGCGGGGAGGAGTCTCTGTGGCTCGAGATaGCCTAGGGAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LSYRLQGQNFLFRLAGRSLCGSR*PRESAA
Trigger: GGCAGCACTTTCCCTAGGCAATCTCGAGCCACAGAG...ACTCCTCCCCGCCAACCTGAACAGAAAGTTTTGACCTTGCAACCTGTAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGGCAGAGGATGGGCTaGGTGTGGCCTTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKRQRMG*VWPSAM
Trigger: CATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAATGGAGACCACGTTGTaGGGGTGGCCCTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSMETTL*GWPFRA
Trigger: AGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCAT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GAAGCGGGAAGCACAAGACCAGCGATGCAACGGAAAAACAGGGTGGGCAACTTTGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: EAGSTRPAMQRKNRVGNFAVKIC*ALVQMA
Trigger: TGCCATCTGCACCAATGCCAAGCATATCTTCACAGC...AAAGTTGCCCACCCTGTTTTTCCGTTGCATCGCTGGTCTTGTGCTTCCCGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGTCCCACTGTTCATGCTaGGAAAAGGACGGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VADPSETAENGHDDEHLSSHCSC*EKDGGC
Trigger: GCACCCACCGTCCTTTTCCAAGCATGAACAGTGGGA...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332129.6
CDS-3UTR CAA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTCAACATTTAGGGTGCTaGTGCAGTGAGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFQHLGC*CSEWSW
Trigger: CCAGCTCCACTCACTGCACAAGCACCCTAAATGTTG...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCTGCGGGACCCTGCCATaGTGCTCAAATCACAACCAT +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGCGTLP*CSNHNH
Trigger: ATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCA...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCCAGGGAACCCGCTCATAAGCTTCGAAAGCACAAAGTGGGGCTTGACCCAGGAATCTTTCCTCCTTCCTaGGAAATCTCGCAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: SREPAHKLRKHKVGLDPGIFPPS*EISQGN
Trigger: GTTGCCTTGCGAGATTTCCAAGGAAGGAGGAAAGAT...TCCTGGGTCAAGCCCCACTTTGTGCTTTCGAAGCTTATGAGCGGGTTCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTGACCACCTCAAAGGCTaGGGTGTGCCAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTDHLKG*GVPGSA
Trigger: GGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTC...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTGACCACCTCAAAGGCTaGGGTGTGCCAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASDHLKG*GVPGSA
Trigger: GGCGGAGCCTGGCACACCCAAGCCTTTGAGGTGGTC...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS GCA 90 bp GCAGCACACTGGATACTCCTGTGGGCCCCTCTATCAACGATTCTGTaGCAGTCTAGCAGTCTTACCTGTTCCAACACAACACATTCAGCA +
Preference number: 5 (lower is better)
Translates to: AAHWILLWAPLSTIL*QSSSLTCSNTTHSA
Trigger: TGCTGAATGTGTTGTGTTGGAACAGGTAAGACTGCTAGACTGGCACAGAATCGTTGATAGAGGGGCCCACAGGAGTATCCAGTGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGCTCCTCCTCCGACGTaGCCATGTCAAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKAPPPT*PCQSQC
Trigger: GCACTGGCTTTGACATGGCAACGTCGGAGGAGGAGC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATCGTGGATCTTGATGTaGGACCTGCGGTGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSWILM*DLRWRV
Trigger: CACCCGCCACCGCAGGTCCAACATCAAGATCCACGA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAACGTGCACCACCTTCTaGCTCTGGTCCCCTAAGGCG +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGTCTTF*LWSPKA
Trigger: CGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACGT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AAAGTCCAAAAGTCACTGCGTCCTCTGAAGGGAGGTGGGGCTGGCTCTTGGCTCGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: KVQKSLRPLKGGGAGSWLAYLSV*RVSMKS
Trigger: AGATTTCATGGAGACCCTCAACACACTCAAATATGC...GAGCCAAGAGCCAGCCCCACCTCCCTTCAGAGGACGCAGTGACTTTTGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGCCCGATTGGCATATTaGAGTGTGTTGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSARLAY*SVLRVS
Trigger: GGAGACCCTCAACACACTCAAATATGCCAATCGGGC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGACTACCACCTTGTTCTaGATGTTGCGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRTTTLF*MLRARL
Trigger: CAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGT...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCATGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSWFTTT*FLMLRA
Trigger: GGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCA...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACC +
Preference number: 5 (lower is better)
Translates to: VADPSETAENGHDDEHLSICWLV*SWFTTT
Trigger: GGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAAT...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCAGATTTGGGCAGACAGTTaGGGCTCGCTCTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: ADPSETAENGHDDEHLSQIWADS*GSLLNL
Trigger: CAAGTTCAAGAGCGAGCCCAAACTGTCTGCCCAAAT...CTGCGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TGTGGAGGAGTTTCTATTTCCTACTTCCCTGCAAGGCCCTCAGGACATGGTTCACGACACAGCTTTCATTaGGGCAGACAGTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: CGGVSISYFPARPSGHGSRHSFH*GRQFGL
Trigger: GAGCCCAAACTGTCTGCCCAAATGAAAGCTGTGTCG...TGAACCATGTCCTGAGGGCCTTGCAGGGAAGTAGGAAATAGAAACTCCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAACCCACTCCGTCCTCTTaGATCTCAACGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKPTPSS*ISTREA
Trigger: GGCCTCCCTCGTTGAGATCAAAGAGGACGGAGTGGG...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTAAGACATTGCGGTCATaGCGGGGCCGAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASKTLRS*RGRVGG
Trigger: CCCTCCCACTCGGCCCCGCAATGACCGCAATGTCTT...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTTTACCAAGTTCCACATCTaGCAGCTTCGGTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PVKSACGTLPLCSNHNHFTKFHI*QLRSLD
Trigger: GTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGGT...AAAATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATCCACGTTCCAGACCTaGATGACACCCGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSTFQT*MTPARQ
Trigger: CTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGGACTGTCGTGGCCCTaGATCTCACCGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNGLSWP*ISPMGV
Trigger: CACACCCATCGGTGAGATCAAGGGCCACGACAGTCC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp ATTGCTGACAGACTGTTCAGGTCCCAGGAGACCAGCATCCAAGGGGGTCTCCTTAAGATATGCTTGGCATaGGTGCAGATGGCATTGATG +
Preference number: 5 (lower is better)
Translates to: IADRLFRSQETSIQGGLLKICLA*VQMALM
Trigger: CATCAATGCCATCTGCACCAATGCCAAGCATATCTT...AAGGAGACCCCCTTGGATGCTGGTCTCCTGGGACCTGAACAGTCTGTCAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GTAGCTGACCCATCAGAAACAGCAGAAAATGGGCATGATGATGAGCACCTCTCGCCCCTAACATGGACCTaGGACATCCCTGAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: VADPSETAENGHDDEHLSPLTWT*DIPERV
Trigger: CACTCTTTCAGGGATGTCCAAGGTCCATGTTAGGGG...CGAGAGGTGCTCATCATCATGCCCATTTTCTGCTGTTTCTGATGGGTCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCACACAAACACGATGGTGAACAGACCAGGCACAGGCAACAACCAGGGGATATGATCTTTCCTCCTTCCTaGGAAATCTCGCAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: PHKHDGEQTRHRQQPGDMIFPPS*EISQGN
Trigger: GTTGCCTTGCGAGATTTCCAAGGAAGGAGGAAAGAT...CATATCCCCTGGTTGTTGCCTGTGCCTGGTCTGTTCACCATCGTGTTTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGCCTGTCAAGTCTGCCTGCGGGACCCTGCCATTGTGCTCAAATCACAACCATTGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: GLSSLPAGPCHCAQITTIAYLSV*RVSMKS
Trigger: AGATTTCATGGAGACCCTCAACACACTCAAATATGC...AATGGTTGTGATTTGAGCACAATGGCAGGGTCCCGCAGGCAGACTTGACAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCGCAGTGCACTGATTaGCTGGCTGGTCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPQCTD*LAGLVL
Trigger: CAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAGCTCCTCCCTTTTCTaGATGAGCCGCTCCATGTCA +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSSSLF*MSRSMS
Trigger: TGACATGGAGCGGCTCATCAAGAAAAGGGAGGAGCT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNDALRK*SSRRRA
Trigger: AGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKDALRK*SSRRRA
Trigger: AGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATC...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAATTTGGGCAGACAGTTaGGGCTCGCTCTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSIWADS*GSLLNL
Trigger: CAAGTTCAAGAGCGAGCCCAAACTGTCTGCCCAAAT...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCCCAGCCTCTCTCTCAGACTTGGTGATGTTCTaGGTGGAGATATCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RDNALWLHSLISSPASLSDLVMF*VEISSG
Trigger: CCCACTGGATATCTCCACCAAGAACATCACCAAGTC...TGAGAGAGAGGCTGGGGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGACCAAGTTCCACATCTaGCAGCTTCGGTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRTKFHI*QLRSLD
Trigger: GTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGGT...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CCGGGGGTGGGAGCTCAAGGGGACAGAGTCTTACGTGTTTCTATCGCTTGTAAAAAGATATGCTTGGCATaGGTGCAGATGGCATTGATG +
Preference number: 5 (lower is better)
Translates to: PGVGAQGDRVLRVSIACKKICLA*VQMALM
Trigger: CATCAATGCCATCTGCACCAATGCCAAGCATATCTT...TTTACAAGCGATAGAAACACGTAAGACTCTGTCCCCTTGAGCTCCCACCCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCACCAAGTTCCACATCTaGCAGCTTCGGTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSTKFHI*QLRSLD
Trigger: GTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGGT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACAGTCCTTGTGCGCATaGGGGATTTGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGQSLCA*GICWMS
Trigger: GCTCATCCAGCAAATCCCCAATGCGCACAAGGACTG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGACCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGPMGVK*STFQTL
Trigger: CAAGGTCTGGAACGTGGACAACTTCACACCCATCGG...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGAGCACAAAGTGGGGCTaGACCCAGGAGACTGGGAAT +
Preference number: 5 (lower is better)
Translates to: RVSIACKQSCGRILSYRLSTKWG*TQETGN
Trigger: ATTCCCAGTCTCCTGGGTCAAGCCCCACTTTGTGCT...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TTCCTTAGCTACCTGAGGACTTATCTTTTTGGGCTCAGAGGCAGGTGCAGTGGCGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: FLSYLRTYLFGLRGRCSGAYLSV*RVSMKS
Trigger: AGATTTCATGGAGACCCTCAACACACTCAAATATGC...GCCACTGCACCTGCCTCTGAGCCCAAAAAGATAAGTCCTCAGGTAGCTAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAGCCCGATTGGCATATTaGAGTGTGTTGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGARLAY*SVLRVS
Trigger: GGAGACCCTCAACACACTCAAATATGCCAATCGGGC...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAACTACCACCTTGTTCTaGATGTTGCGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGTTTLF*MLRARL
Trigger: CAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKWFTTT*FLMLRA
Trigger: GGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACC +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNICWLV*SWFTTT
Trigger: GGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAAT...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp TCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: SLVNSHADGFFLTGCKVKKKWLI*RFHWRT
Trigger: CGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTT...TTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACGAGTGGCTGCAGTACTaGATGGAGACCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNEWLQY*METTLL
Trigger: CAACAACGTGGTCTCCATCAAGTACTGCAGCCACTC...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTPMGVK*STFQTL
Trigger: CAAGGTCTGGAACGTGGACAACTTCACACCCATCGG...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp GGGCAGAGAAACTCTGCCAACTCCCTCTTCCTTGATAATTTTCTGCAAGGGAGGCCAACTCCCTCTTCCTaGATAATTTTCTGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: GQRNSANSLFLDNFLQGRPTPSS*IIFCKG
Trigger: TCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGG...CCTCCCTTGCAGAAAATTATCAAGGAAGAGGGAGTTGGCAGAGTTTCTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS TCA 90 bp AGTCTAGCAGTCTTACCTGTTCCAACACAACACATTCAGCAGATATaGAAACACCCTGGAGAGTGTCTGCCCTGTGCACAAGATCTATGC +
Preference number: 5 (lower is better)
Translates to: SLAVLPVPTQHIQQI*KHPGECLPCAQDLC
Trigger: GCATAGATCTTGTGCACAGGGCAGACACTCTCCAGGGTGTTTTCATATCTGCTGAATGTGTTGTGTTGGAACAGGTAAGACTGCTAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp CACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACACCTTGTGCTAGTGCCCGATTGGCATATTaGAGTGTGTTGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HYVQPSAEVQNIYTPCASARLAY*SVLRVS
Trigger: GGAGACCCTCAACACACTCAAATATGCCAATCGGGC...ACTAGCACAAGGTGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCTCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSSISFC*ISISQV
Trigger: GACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGA...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS-3UTR CAA 90 bp AATAATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAATGTCAGCCTCCAGGTaGACAATGGTCATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: NNLIPLRSSSDRSGEREGMSASR*TMVILC
Trigger: GCAGAGAATGACCATTGTCAACCTGGAGGCTGACAT...TCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAATTCCTTTTGTGCCACTaGCAGCCCCTTGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKFLLCH*QPLVNG
Trigger: TCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAA...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp CGTGTTTCTATCGCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGTTGCAGCTTCGGTCTTaGGACCCTGTGAATAGCAAC +
Preference number: 5 (lower is better)
Translates to: RVSIACKQSCGRILSYRLLQLRS*DPVNSN
Trigger: GTTGCTATTCACAGGGTCCAAAGACCGAAGCTGCAA...CAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGCGATAGAAACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AGGAGGGGAACAAGAAGGGATAATGCCCTTTGGCTTCACAGCTTAATTTCCTCCAAGATATGCTTGGCATaGGTGCAGATGGCATTGATG +
Preference number: 5 (lower is better)
Translates to: RRGTRRDNALWLHSLISSKICLA*VQMALM
Trigger: CATCAATGCCATCTGCACCAATGCCAAGCATATCTT...GGAGGAAATTAAGCTGTGAAGCCAAAGGGCATTATCCCTTCTTGTTCCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000461742.7
CDS CCA 90 bp CTTACCTGTTCCAACACAACACATTCAGCAGATATGAAAACACCCTaGAGAGTGTCTGCCCTGTGCACAAGATCTATGCAACAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LTCSNTTHSADMKTP*RVSALCTRSMQQKL
Trigger: CAGCTTTTGTTGCATAGATCTTGTGCACAGGGCAGACACTCTCCAGGGTGTTTTCATATCTGCTGAATGTGTTGTGTTGGAACAGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS-3UTR CAA 90 bp ATAACTTTCATACACTATGTACAGCCATCGGCAGAGGTACAAAACATATATACATTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: ITFIHYVQPSAEVQNIYTLASSR*ASWLMS
Trigger: GCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAA...TGTATATATGTTTTGTACCTCTGCCGATGGCTGTACATAGTGTATGAAAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp AATCTCATACCGTTAAGAAGCAGCTCAGATCGAAGTGGGGAAAGAGAGGGAAAAAGTTTGGGCTCGCTCTaGAACTTGAAATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSSDRSGEREGKSLGSL*NLKSSW
Trigger: CCATGACGATTTCAAGTTCAAGAGCGAGCCCAAACT...TTTTCCCTCTCTTTCCCCACTTCGATCTGAGCTGCTTCTTAACGGTATGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS-3UTR CAA 90 bp GCTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: ACKQSCGRILSYRLQGQNSISFC*ISISQV
Trigger: GACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGA...GTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS-3UTR CAA 90 bp CTTGTAAACAGTCATGCGGACGGATTCTTTCTTACAGGTTGCAAGGTCAAAACTTTTCCCCATGTGGTTTaGTGCTTTAAACTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LVNSHADGFFLTGCKVKTFPHVV*CFKLPS
Trigger: AGAGGGCAGTTTAAAGCACAAAACCACATGGGGAAA...AGTTTTGACCTTGCAACCTGTAAGAAAGAATCCGTCCGCATGACTGTTTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000461742.7
CDS CCA 90 bp TTTCCCACTCTGTTCCTTTGTGCATGGCTTGTTCTTTACCTAGAATaGCTGTCCCATCTCATTTTGCTGTTACCTCATTCATTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FPTLFLCAWLVLYLE*LSHLILLLPHSFFK
Trigger: TTTGAAGAATGAATGAGGTAACAGCAAAATGAGATGGGACAGCCATTCTAGGTAAAGAACAAGCCATGCACAAAGGAACAGAGTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS TCA 90 bp CAGTTCTCCTTGACAATAAAAAGTCCAAATTTTGTAACCAGCCACTaGAGGCCTCTCACAATCTTACTTGACCTAACTTTCCACAGTGTA +
Preference number: 5 (lower is better)
Translates to: QFSLTIKSPNFVTSH*RPLTILLDLTFHSV
Trigger: TACACTGTGGAAAGTTAGGTCAAGTAAGATTGTGAGAGGCCTTCAGTGGCTGGTTACAAAATTTGGACTTTTTATTGTCAAGGAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp CCCTGCGGATCACCTCCGAGGCATCCTCCATGGAGCTaGCAGGGCTGCCCCCGAAGGCCGGGGCGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: PCGSPPRHPPWS*QGCPRRPGRLE
Trigger: CTCCAGCCGCCCCGGCCTTCGGGGGCAGCCCTGCCAGCTCCATGGAGGATGCCTCGGAGGTGATCCGCAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TCCTGCAGCCCCTTCTCTTCCTCGGGGCTCTCAGCCTaGAGCCGCTCCCGCTTCCTCCGCAGTGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SCSPFSSSGLSA*SRSRFLRSASC
Trigger: GCAGGAGGCACTGCGGAGGAAGCGGGAGCGGCTGCAGGCTGAGAGCCCCGAGGAAGAGAAGGGGCTGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TCAGGTCCAGCCACGCCCTGCTCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCAAAGAGGTGTGCGATG +
Preference number: 6 (lower is better)
Translates to: SGPATPCSCARR*RSAMPPKRCAM
Trigger: CATCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTGGCTGGACCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp ACTTTGAACTCAGGTCCAGCCACGCCCTGCTCCTGTGCCCGGCGCTaGCGCTCGGCAATGCCCCCAAAGAGGTGTGCGATGGCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: TLNSGPATPCSCARR*RSAMPPKRCAMALG
Trigger: CCCGAGGGCCATCGCACACCTCTTTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTGGCTGGACCTGAGTTCAAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp TTGCCGACAGGCTGGAACCTGCTAAGCTCCCAGATGCGGACGGCATaGCCCGAGGCGGCGTACAGCATGGTGCCCGAAGGGCTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: LPTGWNLLSSQMRTA*PEAAYSMVPEGLRA
Trigger: CGCCCTCAGCCCTTCGGGCACCATGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp GATGTCGGGGGAGGGAGTCCTAGCCCGTTGGTGCTCTaGCCTGGCCTGGCACAGCCCAACTCACCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: DVGGGSPSPLVL*PGLAQPNSPAL
Trigger: CAAGGCCGGTGAGTTGGGCTGTGCCAGGCCAGGTCAGAGCACCAACGGGCTAGGACTCCCTCCCCCGACATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp GTCCTGCACGCCCTGCCACCCGCTCAGACATGGGCTTaGCCAGGCGCCTCAGTGCAGAAACCTCCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: VLHALPPAQTWA*PGASVQKPPGS
Trigger: AGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGGCAGGGCGTGCAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GGCTGGAACCTGCTAAGCTCCCAGATGCGGACGGCATaGCCCGAGGCGGCGTACAGCATGGTGCCCGAAGGG +
Preference number: 6 (lower is better)
Translates to: GWNLLSSQMRTA*PEAAYSMVPEG
Trigger: CCCTTCGGGCACCATGCTGTACGCCGCCTCGGGCAATGCCGTCCGCATCTGGGAGCTTAGCAGGTTCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp CCTTCGGCCATGGAGACACACTGCAGTGGGGCCGTCCGTGCACCCTaGGCTCCTCCAACCGGGGAGATGATGCCCTTGTCCAGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: PSAMETHCSGAVRAP*APPTGEMMPLSSAD
Trigger: GTCAGCGCTGGACAAGGGCATCATCTCCCCGGTTGGAGGAGCCAAGGGTGCACGGACGGCCCCACTGCAGTGTGTCTCCATGGCCGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000360529.9
CDS GCA 72 bp GACTTTGAACTCAGGTCCAGCCACGCCCTGCTCCTGTaGCCGGCGCTTGCGCTCGGCAATGCCCCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: DFELRSSHALLL*PALALGNAPKE
Trigger: CTCTTTGGGGGCATTGCCGAGCGCAAGCGCCGGGCACAGGAGCAGGGCGTGGCTGGACCTGAGTTCAAAGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp CGATGCCATCGTAGTGCGGGGGCTCGAAGTTGTGAGTaGGGCCGATGGTGCCCGTCACACACTCGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: RCHRSAGARSCE*GRWCPSHTRPA
Trigger: AGCTGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTCACAACTTCGAGCCCCCGCACTACGATGGCATCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GCCTCATTGCCATCGCCGGCCTTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGCTGGGTGACGCGGTTG +
Preference number: 6 (lower is better)
Translates to: ASLPSPALASSR*ASWLMSWVTRL
Trigger: CAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGGCAATGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GCACAGCCCAACTCACCGGCCTTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGCTGGGTGACGCGGTTG +
Preference number: 6 (lower is better)
Translates to: AQPNSPALASSR*ASWLMSWVTRL
Trigger: CAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGTGAGTTGGGCTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 90 bp GGTGGCTTTAGTCCTGCACGCCCTGCCACCCGCTCAGACATGGGCTaGGCCAGGCGCCTCAGTGCAGAAACCTCCTGGGTCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GGFSPARPATRSDMG*ARRLSAETSWVFLL
Trigger: GAGGAGGAAGACCCAGGAGGTTTCTGCACTGAGGCGCCTGGCCAAGCCCATGTCTGAGCGGGTGGCAGGGCGTGCAGGACTAAAGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp TGGGTGCTGGGGCTGATGACCCACCATGTGCCTACCAGGCCACAGTaGATGGAGATGCCCTCCTTGGCCCGCTCGCCAGTAGCCCCTGTC +
Preference number: 6 (lower is better)
Translates to: WVLGLMTHHVPTRPQ*MEMPSLARSPVAPV
Trigger: GACAGGGGCTACTGGCGAGCGGGCCAAGGAGGGCATCTCCATCAACTGTGGCCTGGTAGGCACATGGTGGGTCATCAGCCCCAGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 90 bp CCTGGCCTGGCACAGCCCAACTCACCGGCCTTGGCTAGCAGCAGGTaGGCCTCCTGGCTCATGAGCTGGGTGACGCGGTTGTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: PGLAQPNSPALASSR*ASWLMSWVTRLLMA
Trigger: TGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGTGAGTTGGGCTGTGCCAGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS TCA 72 bp GATGGCACGGGTGGATGTGGCGGCACAGGCATCCCCTaGGATCACCTGGCCCGAGGACGTGAGAGTCCGAAT +
Preference number: 6 (lower is better)
Translates to: DGTGGCGGTGIP*DHLARGRESPN
Trigger: ATTCGGACTCTCACGTCCTCGGGCCAGGTGATCTCAGGGGATGCCTGTGCCGCCACATCCACCCGTGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TGGGTGACGCGGTTGTTGATGGCATCGATGGCCTCCTaGATGGCTTTCACCCGCAGCCGCAGGGCCCCATTC +
Preference number: 6 (lower is better)
Translates to: WVTRLLMASMAS*MAFTRSRRAPF
Trigger: GAATGGGGCCCTGCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGCCATCAACAACCGCGTCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CCA 72 bp CCATCGCCGGCCTTGGCTAGCAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACGCGGTTGTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: PSPALASSRLAS*LMSWVTRLLMA
Trigger: TGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGCGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp CGTAGTGCGGGGGCTCGAAGTTGTGAGTGGGGCCGATaGTGCCCGTCACACACTCGCCCAGCTCGAACATCT +
Preference number: 6 (lower is better)
Translates to: RSAGARSCEWGR*CPSHTRPARTS
Trigger: AGATGTTCGAGCTGGGCGAGTGTGTGACGGGCACCATCGGCCCCACTCACAACTTCGAGCCCCCGCACTACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp AGCAGCAGGTTGGCCTCCTGGCTCATGAGCTGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCCTGCATGGCTTTCACCCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SSRLASWLMSWVTRL*MASMASCMAFTRSR
Trigger: GCGGCTGCGGGTGAAAGCCATGCAGGAGGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 90 bp CTCCGCTGCCTGACCTCCTTCTTCTTTAGCCGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCCGAGGCATCCTCCATGGAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LRCLTSFFFSRSRSC*ALRITSEASSMELA
Trigger: TGCCAGCTCCATGGAGGATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCTAAAGAAGAAGGAGGTCAGGCAGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp CCCTTGATCTCACCGATGGGTGTGAAGTTGTCCACGTTCCAGACCTaGATGACACCCGCACGGCAGGCGCTGAGCAGCATGGGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: PLISPMGVKLSTFQT*MTPARQALSSMGRP
Trigger: GGGCCGCCCCATGCTGCTCAGCGCCTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGACAACTTCACACCCATCGGTGAGATCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TGCCTGACCTCCTTCTTCTTTAGCCGCTCCAGGTCCTaGTTGGCCCTGCGGATCACCTCCGAGGCATCCTCC +
Preference number: 6 (lower is better)
Translates to: CLTSFFFSRSRS*LALRITSEASS
Trigger: GGAGGATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCTAAAGAAGAAGGAGGTCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp CGGTTCCTCTTGGTCTCCACTAGCCGCCGCCGCTGTTaGTCCTCACGCATCTGCTTCATCAGGGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: RFLLVSTSRRRC*SSRICFIRATL
Trigger: CAAGGTGGCCCTGATGAAGCAGATGCGTGAGGAGCAACAGCGGCGGCGGCTAGTGGAGACCAAGAGGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp AGCAGATGGTTCTGGGAGGAGCCTGCCATATCCGTCTaGCTCAGTCGGCCCTCCAACAGCCGGATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SRWFWEEPAISV*LSRPSNSRIWA
Trigger: AGCCCAGATCCGGCTGTTGGAGGGCCGACTGAGGCAGACGGATATGGCAGGCTCCTCCCAGAACCATCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp GTCTGGGTGACCGTCAGGCACATCACAGGGCCGATGTaGCCAGTCAGCTTGCCGACAGGCTGGAACCTGCTA +
Preference number: 6 (lower is better)
Translates to: VWVTVRHITGPM*PVSLPTGWNLL
Trigger: TAGCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGATGTGCCTGACGGTCACCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GGGCTGATGACCCACCATGTGCCTACCAGGCCACAGTaGATGGAGATGCCCTCCTTGGCCCGCTCGCCAGTA +
Preference number: 6 (lower is better)
Translates to: GLMTHHVPTRPQ*MEMPSLARSPV
Trigger: TACTGGCGAGCGGGCCAAGGAGGGCATCTCCATCAACTGTGGCCTGGTAGGCACATGGTGGGTCATCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 90 bp CCATTGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACGATGCTGGAGACAGAGCGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: PLTVGAGWSPKKWLI*RFHWRTMLETERAP
Trigger: AGGGGCCCGCTCTGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp CGGGTGCCATTGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGGCGCACGATGCTGGAGACAGAGCGG +
Preference number: 6 (lower is better)
Translates to: RVPLTVGAGWSPKKW*ILRFHWRTMLETER
Trigger: CCGCTCTGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp CGTGCACCACCTTCTTGCTCTGGTCCCCTAAGGCGCTaGTCACATTGCCCAAGGCCAGCTGCCTCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: RAPPSCSGPLRR*SHCPRPAASLA
Trigger: GGCCAAAGAGGCAGCTGGCCTTGGGCAATGTGATCAGCGCCTTAGGGGACCAGAGCAAGAAGGTGGTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 72 bp CGGGGTCTGAGTCTGAGTCCACCAGGCTCTCTTCACTaGCCGAGTCCTCATCTTCATCCTCGCGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: RGLSLSPPGSLH*PSPHLHPRALP
Trigger: AGGAAGGGCGCGAGGATGAAGATGAGGACTCGGGCAGTGAAGAGAGCCTGGTGGACTCAGACTCAGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp TCATTCACCAGGTCGGGCTGGGTGCACATGCGCATCTaGCACAGGTGGATGGTGAAGATGGCGTGGGAGCGT +
Preference number: 6 (lower is better)
Translates to: SFTRSGWVHMRI*HRWMVKMAWER
Trigger: ACGCTCCCACGCCATCTTCACCATCCACCTGTGCCAGATGCGCATGTGCACCCAGCCCGACCTGGTGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CCA 72 bp TTGGCTAGCAGCAGGTTGGCCTCCTGGCTCATGAGCTaGGTGACGCGGTTGTTGATGGCATCGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LASSRLASWLMS*VTRLLMASMAS
Trigger: GGAGGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CCA 72 bp CGGGCAGGACGGGTGCCATTGACAGTGGGCGCAGGATaGTCCCCCAAGAAGTGGTTGATTTTGCGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: RAGRVPLTVGAG*SPKKWLILRFH
Trigger: GTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp TCCGTCTGCCTCAGTCGGCCCTCCAACAGCCGGATCTaGGCTTCCTTTTGTGCCACTTGCAGCCCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SVCLSRPSNSRI*ASFCATCSPLS
Trigger: TGACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGAGGGCCGACTGAGGCAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp AACTCACCGGCCTTGGCTAGCAGCAGGTTGGCCTCCTaGCTCATGAGCTGGGTGACGCGGTTGTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: NSPALASSRLAS*LMSWVTRLLMA
Trigger: TGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTAGCCAAGGCCGGTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp TTGACTGGCTGGCTTAGTCCACCTGATACTCTGGGGTaGATGTCGGGGGAGGGAGTCCTAGCCCGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: LTGWLSPPDTLG*MSGEGVLARWC
Trigger: GCACCAACGGGCTAGGACTCCCTCCCCCGACATCCACCCCAGAGTATCAGGTGGACTAAGCCAGCCAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 72 bp CTGACCTCCTTCTTCTTTAGCCGCTCCAGGTCCTGCTaGGCCCTGCGGATCACCTCCGAGGCATCCTCCATG +
Preference number: 6 (lower is better)
Translates to: LTSFFFSRSRSC*ALRITSEASSM
Trigger: CATGGAGGATGCCTCGGAGGTGATCCGCAGGGCCAAGCAGGACCTGGAGCGGCTAAAGAAGAAGGAGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GTCAGGCACATCACAGGGCCGATGTGGCCAGTCAGCTaGCCGACAGGCTGGAACCTGCTAAGCTCCCAGATG +
Preference number: 6 (lower is better)
Translates to: VRHITGPMWPVS*PTGWNLLSSQM
Trigger: CATCTGGGAGCTTAGCAGGTTCCAGCCTGTCGGCAAGCTGACTGGCCACATCGGCCCTGTGATGTGCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp TGGTGTAGATGCCACCGTTTGCGTCCTCGTGGATCTTaGTGTTGGACCTGCGGTGGCGGGTGTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: WCRCHRLRPRGS*CWTCGGGCQGH
Trigger: GTGACCCTGACACCCGCCACCGCAGGTCCAACATCAAGATCCACGAGGACGCAAACGGTGGCATCTACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp CCTTGTCCAGCGCTGACCCCTGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGCGGTCATTGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: PCPALTPGSDYW*DERRHCGHCGA
Trigger: GGCCCCGCAATGACCGCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000360529.9
CDS CCA 72 bp TTTGCGTCCTCGTGGATCTTGATGTTGGACCTGCGGTaGCGGGTGTCAGGGTCACGGGTGCTGTCAAACAGG +
Preference number: 6 (lower is better)
Translates to: FASSWILMLDLR*RVSGSRVLSNR
Trigger: CCTGTTTGACAGCACCCGTGACCCTGACACCCGCCACCGCAGGTCCAACATCAAGATCCACGAGGACGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp CGATCTCCCGGATGTAGTTCTGGATCAGCGCACCAATaGCCTCATTGCCATCGCCGGCCTTGGCTAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RSPGCSSGSAHQ*PHCHRRPWLAA
Trigger: TGCTGCTAGCCAAGGCCGGCGATGGCAATGAGGCCATTGGTGCGCTGATCCAGAACTACATCCGGGAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp GCCGCCTTACTGAAGCTCTGGCTGGCCCCCTTCTTCTaGAACTTCTTTCGGGCAGGACGGGTGCCATTGACA +
Preference number: 6 (lower is better)
Translates to: AALLKLWLAPFF*NFFRAGRVPLT
Trigger: TGTCAATGGCACCCGTCCTGCCCGAAAGAAGTTCCAGAAGAAGGGGGCCAGCCAGAGCTTCAGTAAGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp GCAACTCATCTGTGGCATCCAGGCAGAGGATGGGCTTaGTGTGGCCTTCGGCCATGGAGACACACTGCAGTG +
Preference number: 6 (lower is better)
Translates to: ATHLWHPGRGWA*CGLRPWRHTAV
Trigger: CACTGCAGTGTGTCTCCATGGCCGAAGGCCACACCAAGCCCATCCTCTGCCTGGATGCCACAGATGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TTGGCCTCCTGGCTCATGAGCTGGGTGACGCGGTTGTaGATGGCATCGATGGCCTCCTGCATGGCTTTCACC +
Preference number: 6 (lower is better)
Translates to: LASWLMSWVTRL*MASMASCMAFT
Trigger: GGTGAAAGCCATGCAGGAGGCCATCGATGCCATCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 72 bp GTGGGCGCAGGATGGTCCCCCAAGAAGTGGTTGATTTaGCGGTTCCACTGGCGCACGATGCTGGAGACAGAG +
Preference number: 6 (lower is better)
Translates to: VGAGWSPKKWLI*RFHWRTMLETE
Trigger: CTCTGTCTCCAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TCACCGATGGGTGTGAAGTTGTCCACGTTCCAGACCTaGATGACACCCGCACGGCAGGCGCTGAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: SPMGVKLSTFQT*MTPARQALSSM
Trigger: CATGCTGCTCAGCGCCTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGACAACTTCACACCCATCGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp TGCAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTCAGGTCGGCCAGGTCCGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: CNRRWLFSSSSISFC*ISISQVRSARSAWK
Trigger: CTTCCAGGCGGACCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp TTGATGGGACTGTCGTGGCCCTTGATCTCACCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTGATGACACCCGCACGGCAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: LMGLSWPLISPMGVK*STFQTLMTPARQAL
Trigger: CAGCGCCTGCCGTGCGGGTGTCATCAAGGTCTGGAACGTGGACAACTTCACACCCATCGGTGAGATCAAGGGCCACGACAGTCCCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp GAGAACACAAGCCCCGAGTGGCTGCAGTACTTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGAGCTGCGATCTCCTGTCCCGTAACC +
Preference number: 6 (lower is better)
Translates to: ENTSPEWLQYLMETT*LGWPFRAAISCPVT
Trigger: GGTTACGGGACAGGAGATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp TCTTCTGGAACTTCTTTCGGGCAGGACGGGTGCCATTaGCAGTGGGCGCAGGATGGTCCCCCAAGAAGTGGT +
Preference number: 6 (lower is better)
Translates to: SSGTSFGQDGCH*QWAQDGPPRSG
Trigger: ACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGCCCGAAAGAAGTTCCAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp ACTTGTCCAGCGCTGACCCCTGGCTCTGATTACTGGTaGGACGAGAGAAGACATTGCGGTCATTGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: TCPALTPGSDYW*DERRHCGHCGA
Trigger: GGCCCCGCAATGACCGCAATGTCTTCTCTCGTCTCACCAGTAATCAGAGCCAGGGGTCAGCGCTGGACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TGTTGGACCTGCGGTGGCGGGTGTCAGGGTCACGGGTaGTGTCAAACAGGTCAAGGATCTCCTCGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: CWTCGGGCQGHG*CQTGQGSPRCR
Trigger: TCTACAACGAGGAGATCCTTGACCTGTTTGACAGCACCCGTGACCCTGACACCCGCCACCGCAGGTCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp GCGAGAAGTGACGCCAGTGGTGTAGATGCCACCGTTTaGGTCCTCGTGGATCTTGATGTTGGACCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: ARSDASGVDATV*VLVDLDVGPAV
Trigger: CACCGCAGGTCCAACATCAAGATCCACGAGGACGCAAACGGTGGCATCTACACCACTGGCGTCACTTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp CGCCGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTaGTTGATTTCGATCTCACAAGTCAGGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RRWLFSSSSISF*LISISQVRSAR
Trigger: CCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TCGGCCCTCCAACAGCCGGATCTGGGCTTCCTTTTGTaGCACTTGCAGCCCCTTGTCAATGGATGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: SALQQPDLGFLL*HLQPLVNGCLE
Trigger: CTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGCACAAAAGGAAGCCCAGATCCGGCTGTTGGAGGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp CTGACCATCCATGCAAGTAAGGCCAACTCTCTCCTCTaGCCCTCTGCAGCACACTGGATACTCCTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: LTIHASKANSLL*PSAAHWILLWA
Trigger: GGCCCACAGGAGTATCCAGTGTGCTGCAGAGGGGCAGAGGAGAGAGTTGGCCTTACTTGCATGGATGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp TCCTCATACTGGTGCTTGAGCGTCTGCAACCGCCGCTaGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSYWCLSVCNRR*LFSSSSISFCL
Trigger: CAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp CCATTGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTaGTTGATTTTGCGGTTCCACTGGCGCACGATGCTG +
Preference number: 6 (lower is better)
Translates to: PLTVGAGWSPKK*LILRFHWRTML
Trigger: CAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TTGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTGGTaGATTTTGCGGTTCCACTGGCGCACGATGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LTVGAGWSPKKW*ILRFHWRTMLE
Trigger: CTCCAGCATCGTGCGCCAGTGGAACCGCAAAATCAACCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TTCTTCTGGAACTTCTTTCGGGCAGGACGGGTGCCATaGACAGTGGGCGCAGGATGGTCCCCCAAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: FFWNFFRAGRVP*TVGAGWSPKKW
Trigger: CCACTTCTTGGGGGACCATCCTGCGCCCACTGTCAATGGCACCCGTCCTGCCCGAAAGAAGTTCCAGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp ACTTGCAGCCCCTTGTCAATGGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCTTCAGCCAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TCSPLSMDALRK*SSRRRASAREQ
Trigger: CTGCTCCCTGGCTGAAGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATCCATTGACAAGGGGCTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp AGCCCCGAGTGGCTGCAGTACTTGATGGAGACCACGTaGTTGGGGTGGCCCTTTAGAGCTGCGATCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SPEWLQYLMETT*LGWPFRAAISC
Trigger: ACAGGAGATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAAGTACTGCAGCCACTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp CTGTCGTGGCCCTTGATCTCACCGATGGGTGTGAAGTaGTCCACGTTCCAGACCTTGATGACACCCGCACGG +
Preference number: 6 (lower is better)
Translates to: LSWPLISPMGVK*STFQTLMTPAR
Trigger: CCGTGCGGGTGTCATCAAGGTCTGGAACGTGGACAACTTCACACCCATCGGTGAGATCAAGGGCCACGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp AGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACCTTGTTCTTGATGTTGCGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: SRAISARSALICWLV*SWFTTTLFLMLRAR
Trigger: TCGGGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 90 bp TTTTGTGCCACTTGCAGCCCCTTGTCAATGGATGCCTTGAGGAAGTaGTCTAGCAGGAGGCGGGCTTCAGCCAGGGAGCAGGAGCTGATG +
Preference number: 6 (lower is better)
Translates to: FCATCSPLSMDALRK*SSRRRASAREQELM
Trigger: CATCAGCTCCTGCTCCCTGGCTGAAGCCCGCCTCCTGCTAGACAACTTCCTCAAGGCATCCATTGACAAGGGGCTGCAAGTGGCACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp AACACAAGCCCCGAGTGGCTGCAGTACTTGATGGAGACCACGTTGTaGGGGTGGCCCTTTAGAGCTGCGATCTCCTGTCCCGTAACCAAG +
Preference number: 6 (lower is better)
Translates to: NTSPEWLQYLMETTL*GWPFRAAISCPVTK
Trigger: CTTGGTTACGGGACAGGAGATCGCAGCTCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp CCATCTGCAGCCGAGCAATCTCAGCCCGCAGTGCACTaGTTTGCTGGCTGGTCTTGTCCTGGTTCACTACCA +
Preference number: 6 (lower is better)
Translates to: PSAAEQSQPAVH*FAGWSCPGSLP
Trigger: TGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS TCA 72 bp GCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTTaGTTTCGATCTCACAAGTCAGGTCGGCCAGGTCCG +
Preference number: 6 (lower is better)
Translates to: AGCSPARRSASA*FRSHKSGRPGP
Trigger: CGGACCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp AATAGGGAGGTGGGAGGGATGCTGAGGAAGTTAGGGTaGGGCTGCAGGGCAGAGGGTGCATATGGAGCACTA +
Preference number: 6 (lower is better)
Translates to: NREVGGMLRKLG*GCRAEGAYGAL
Trigger: TAGTGCTCCATATGCACCCTCTGCCCTGCAGCCTCACCCTAACTTCCTCAGCATCCCTCCCACCTCCCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 72 bp TGCAGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTaGTGGCTGGTCTTGTCCTGGTTCACTACCACCTTG +
Preference number: 6 (lower is better)
Translates to: CSRAISARSALI*WLVLSWFTTTL
Trigger: CAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS GCA 72 bp ACTCGCTTGCCCGCCTTATACTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCCCGCAGTGCACTGATT +
Preference number: 6 (lower is better)
Translates to: TRLPALYSISSI*SRAISARSALI
Trigger: AATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGAGTATAAGGCGGGCAAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TGCATGACGATGTCAATGATCCGTCGCTCCAGGGACTaGCACTTGAGCCTTGCCGCCTTACTGAAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: CMTMSMIRRSRD*HLSLAALLKLW
Trigger: CCAGAGCTTCAGTAAGGCGGCAAGGCTCAAGTGGCAGTCCCTGGAGCGACGGATCATTGACATCGTCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp ATTTCGATCTCACAAGTCAGGTCGGCCAGGTCCGCCTaGAAGTTCACCTCCTTCTCCTCGGGGTCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: ISISQVRSARSA*KFTSFSSGSES
Trigger: AGACTCAGACCCCGAGGAGAAGGAGGTGAACTTCCAGGCGGACCTGGCCGACCTGACTTGTGAGATCGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp CAGGGACTTGGTGATGTTCTTGGTGGAGATATCCAGTaGGGGGCCCAGGCACTCAGCCGACACAGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: QGLGDVLGGDIQ*GAQALSRHSFH
Trigger: ATGAAAGCTGTGTCGGCTGAGTGCCTGGGCCCCCCACTGGATATCTCCACCAAGAACATCACCAAGTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp AAGGCCAACTCTCTCCTCTGCCCCTCTGCAGCACACTaGATACTCCTGTGGGCCCCTCTATCAACGATTCTG +
Preference number: 6 (lower is better)
Translates to: KANSLLCPSAAH*ILLWAPLSTIL
Trigger: CAGAATCGTTGATAGAGGGGCCCACAGGAGTATCCAGTGTGCTGCAGAGGGGCAGAGGAGAGAGTTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 72 bp CTGCAGCCGAGCAATCTCAGCCCGCAGTGCACTGATTaGCTGGCTGGTCTTGTCCTGGTTCACTACCACCTT +
Preference number: 6 (lower is better)
Translates to: LQPSNLSPQCTD*LAGLVLVHYHL
Trigger: AAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 72 bp CGCTGGCTGTTCTCCAGCTCGTCGATCAGCTTCTGCTaGATTTCGATCTCACAAGTCAGGTCGGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RWLFSSSSISFC*ISISQVRSARS
Trigger: GGACCTGGCCGACCTGACTTGTGAGATCGAAATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GACACGGAGAACACAAGCCCCGAGTGGCTGCAGTACTaGATGGAGACCACGTTGTTGGGGTGGCCCTTTAGA +
Preference number: 6 (lower is better)
Translates to: DTENTSPEWLQY*METTLLGWPFR
Trigger: TCTAAAGGGCCACCCCAACAACGTGGTCTCCATCAAGTACTGCAGCCACTCGGGGCTTGTGTTCTCCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp CGGCAGTCACTGGAGGCTGTGAAGATATGCTTGGCATaGGTGCAGATGGCATTGATGGGACTGTCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: RQSLEAVKICLA*VQMALMGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS CAA 90 bp CGGATCTTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATC +
Preference number: 6 (lower is better)
Translates to: RILFCSRISFSSYWC*SVCNRRWLFSSSSI
Trigger: GATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp TTGGGGATTTGCTGGATGAGCTCCTGCTGGTCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAGCCACTGAACAGGATGTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LGICWMSSCWSRSHF*MPLSREPLNRMSPW
Trigger: CCAGGGAGACATCCTGTTCAGTGGCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp TCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTTaGGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SAAESAFPHTGA*ASATAAGCSPA
Trigger: AGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp AGAATCAGCTTTTCCTCATACTGGTGCTTGAGCGTCTaGAACCGCCGCTGGCTGTTCTCCAGCTCGTCGATC +
Preference number: 6 (lower is better)
Translates to: RISFSSYWCLSV*NRRWLFSSSSI
Trigger: GATCGACGAGCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp AGCATGCTCACCGCCTTATACTCCATCAGCTCCATCTaGAGCCGAGCAATCTCAGCCCGCAGTGCACTGATT +
Preference number: 6 (lower is better)
Translates to: SMLTALYSISSI*SRAISARSALI
Trigger: AATCAGTGCACTGCGGGCTGAGATTGCTCGGCTGCAGATGGAGCTGATGGAGTATAAGGCGGTGAGCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 72 bp ATATGGAGCACTAGCTCCAAGGGGAGTGCTGGGCAATaGCCAGGAGCATGCTCACCGCCTTATACTCCATCA +
Preference number: 6 (lower is better)
Translates to: IWSTSSKGSAGQ*PGACSPPYTPS
Trigger: TGATGGAGTATAAGGCGGTGAGCATGCTCCTGGGCATTGCCCAGCACTCCCCTTGGAGCTAGTGCTCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp AGCCGAGCAATCTCAGCCCGCAGTGCACTGATTTGCTaGCTGGTCTTGTCCTGGTTCACTACCACCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SRAISARSALIC*LVLSWFTTTLF
Trigger: GAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGATTGCTCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 72 bp TTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTaGAGCGTCTGCAACCGCCGCTGGCTGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FCSRISFSSYWC*SVCNRRWLFSS
Trigger: GCTGGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TGCTGGATGAGCTCCTGCTGGTCTAGGTCCCACTTCTaGATGCCGTTATCTCGGGAGCCACTGAACAGGATG +
Preference number: 6 (lower is better)
Translates to: CWMSSCWSRSHF*MPLSREPLNRM
Trigger: CATCCTGTTCAGTGGCTCCCGAGATAACGGCATCAAGAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GTCAGGTCACTGGAGGCTGTGAAGATATGCTTGGCATaGGTGCAGATGGCATTGATGGGACTGTCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: VRSLEAVKICLA*VQMALMGLSWP
Trigger: GGGCCACGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360529.9
ENST00000461742.7
CDS CAA 90 bp AGGTTCTGCAGCACACGGTCGCGCTCCAGCTGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RFCSTRSRSSCVSRI*FCSRISFSSYWCLS
Trigger: GCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACCGTGTGCTGCAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp TTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGGTaGTTGAGCGTCTGCAACCGCCGCTGGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LFCSRISFSSYW*LSVCNRRWLFS
Trigger: GGAGAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp CGGTCGCGCTCCAGCTGTGTGTCTCGGATCTTGTTCTaGAGCAGAATCAGCTTTTCCTCATACTGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: RSRSSCVSRILF*SRISFSSYWCL
Trigger: CAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp TTGTGCGCATTGGGGATTTGCTGGATGAGCTCCTGCTaGTCTAGGTCCCACTTCTTGATGCCGTTATCTCGG +
Preference number: 6 (lower is better)
Translates to: LCALGICWMSSC*SRSHFLMPLSR
Trigger: CCGAGATAACGGCATCAAGAAGTGGGACCTAGACCAGCAGGAGCTCATCCAGCAAATCCCCAATGCGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp GCCTCTTTGGCCCCAGCAGCCCTCTTGCTCCTTGGGTaGGTTTATAGGCACATGGATAAGTTGGTGAAATGG +
Preference number: 6 (lower is better)
Translates to: ASLAPAALLLLG*VYRHMDKLVKW
Trigger: CCATTTCACCAACTTATCCATGTGCCTATAAACCCACCCAAGGAGCAAGAGGGCTGCTGGGGCCAAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 72 bp AGCACACGGTCGCGCTCCAGCTGTGTGTCTCGGATCTaGTTCTGCAGCAGAATCAGCTTTTCCTCATACTGG +
Preference number: 6 (lower is better)
Translates to: STRSRSSCVSRI*FCSRISFSSYW
Trigger: CCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACCGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 90 bp ACCTTGTTCTTGATGTTGCGGGCCCGATTGGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCTCGGTCTGAGGGGCTCACACAGGCG +
Preference number: 6 (lower is better)
Translates to: TLFLMLRARLAYLSV*RVSMKSRSEGLTQA
Trigger: CGCCTGTGTGAGCCCCTCAGACCGAGATTTCATGGAGACCCTCAACACACTCAAATATGCCAATCGGGCCCGCAACATCAAGAACAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 90 bp TCACTGGAGGCTGTGAAGATATGCTTGGCATTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCCTTGATCTCACCGATGGGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: SLEAVKICLALVQMA*MGLSWPLISPMGVK
Trigger: CTTCACACCCATCGGTGAGATCAAGGGCCACGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS TCA 72 bp GCACCGTGGCATTATAGCCCTCGAAGCAGCCCTCGATaGGCTTGCTCACACAGGTGGAATAGATCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: APWHYSPRSSPR*ACSHRWNRSVL
Trigger: AAGAACAGATCTATTCCACCTGTGTGAGCAAGCTCATCGAGGGCTGCTTCGAGGGCTATAATGCCACGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp GTCCCGGTTCATCTCCCGCAGCCTCTTCTCATAGTCTaGCTTGATCTTGTTGGCCTTCTCCTCAGTATAGCA +
Preference number: 6 (lower is better)
Translates to: VPVHLPQPLLIV*LDLVGLLLSIA
Trigger: TGCTATACTGAGGAGAAGGCCAACAAGATCAAGGCAGACTATGAGAAGAGGCTGCGGGAGATGAACCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp AGCTGCCCTCAGAGAACTCTGAGATCTCCTCATCTGTaGTGGCGTAGCCATTCTCCTGCTGCACATTGTAGA +
Preference number: 6 (lower is better)
Translates to: SCPQRTLRSPHL*WRSHSPAAHCR
Trigger: TCTACAATGTGCAGCAGGAGAATGGCTACGCCAGCACAGATGAGGAGATCTCAGAGTTCTCTGAGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CCA 72 bp ATCTTGTTCTGCAGCAGAATCAGCTTTTCCTCATACTaGTGCTTGAGCGTCTGCAACCGCCGCTGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: ILFCSRISFSSY*CLSVCNRRWLF
Trigger: GAACAGCCAGCGGCGGTTGCAGACGCTCAAGCACCAGTATGAGGAAAAGCTGATTCTGCTGCAGAACAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TTGATGTTGCGGGCCCGATTGGCATATTTGAGTGTGTaGAGGGTCTCCATGAAATCTCGGTCTGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: LMLRARLAYLSV*RVSMKSRSEGL
Trigger: GAGCCCCTCAGACCGAGATTTCATGGAGACCCTCAACACACTCAAATATGCCAATCGGGCCCGCAACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 72 bp GCTGCGATCTCCTGTCCCGTAACCAAGTTCCACATCTaGCAGCTTCGGTCTTTGGACCCTGTGAATAGCAAC +
Preference number: 6 (lower is better)
Translates to: AAISCPVTKFHI*QLRSLDPVNSN
Trigger: GTTGCTATTCACAGGGTCCAAAGACCGAAGCTGCAAGATGTGGAACTTGGTTACGGGACAGGAGATCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GCTGTGAAGATATGCTTGGCATTGGTGCAGATGGCATaGATGGGACTGTCGTGGCCCTTGATCTCACCGATG +
Preference number: 6 (lower is better)
Translates to: AVKICLALVQMA*MGLSWPLISPM
Trigger: CATCGGTGAGATCAAGGGCCACGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TTTACCCGGCAGTCACTGGAGGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCATTGATGGGACTGTCG +
Preference number: 6 (lower is better)
Translates to: FTRQSLEAVKIC*ALVQMALMGLS
Trigger: CGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACTGCCGGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS CAA 72 bp TTCACCGTCAGGTCACTGGAGGCTGTGAAGATATGCTaGGCATTGGTGCAGATGGCATTGATGGGACTGTCG +
Preference number: 6 (lower is better)
Translates to: FTVRSLEAVKIC*ALVQMALMGLS
Trigger: CGACAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACCTGACGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360529.9
ENST00000461742.7
CDS CAA 90 bp GCAGCCCTCGATGAGCTTGCTCACACAGGTGGAATAGATCTGTTCTaGCCAGGTGTCCAGGTCGAAGACAAAGTCATAGGTGAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: AALDELAHTGGIDLF*PGVQVEDKVIGEGL
Trigger: AAGGCCTTCACCTATGACTTTGTCTTCGACCTGGACACCTGGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGCTCATCGAGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS GCA 72 bp AACTTTACCCGGCAGTCACTGGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATGGCATTGATGGGACTG +
Preference number: 6 (lower is better)
Translates to: NFTRQSLEAVKI*LALVQMALMGL
Trigger: CAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACTGCCGGGTAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332129.6
ENST00000422435.2
CDS GCA 72 bp AACTTCACCGTCAGGTCACTGGAGGCTGTGAAGATATaGTTGGCATTGGTGCAGATGGCATTGATGGGACTG +
Preference number: 6 (lower is better)
Translates to: NFTVRSLEAVKI*LALVQMALMGL
Trigger: CAGTCCCATCAATGCCATCTGCACCAATGCCAAGCATATCTTCACAGCCTCCAGTGACCTGACGGTGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360529.9
ENST00000461742.7
CDS CCA 72 bp GACAGTTTGGGCTCGCTCTTGAACTTGAAATCGTCATaGCTGGTGGAGCCTTTCATGGTGAATGACTGGGAG +
Preference number: 6 (lower is better)
Translates to: DSLGSLLNLKSS*LVEPFMVNDWE
Trigger: CTCCCAGTCATTCACCATGAAAGGCTCCACCAGCCATGACGATTTCAAGTTCAAGAGCGAGCCCAAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp TGGCTGGTCTTGTCCTGGTTCACTACCACCTTGTTCTaGATGTTGCGGGCCCGATTGGCATATTTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: WLVLSWFTTTLF*MLRARLAYLSV
Trigger: CACACTCAAATATGCCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 72 bp ATCTCAGCCCGCAGTGCACTGATTTGCTGGCTGGTCTaGTCCTGGTTCACTACCACCTTGTTCTTGATGTTG +
Preference number: 6 (lower is better)
Translates to: ISARSALICWLV*SWFTTTLFLML
Trigger: CAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACTGCGGGCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS CAA 90 bp AGTGCACTGATTTGCTGGCTGGTCTTGTCCTGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCCCGATTGGCATATTTGAGTGTGTTG +
Preference number: 6 (lower is better)
Translates to: SALICWLVLSWFTTT*FLMLRARLAYLSVL
Trigger: CAACACACTCAAATATGCCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAATCAGTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS GCA 72 bp TGGATACTCCTGTGGGCCCCTCTATCAACGATTCTGTaGCAGTCTAGCAGTCTTACCTGTTCCAACACAACA +
Preference number: 6 (lower is better)
Translates to: WILLWAPLSTIL*QSSSLTCSNTT
Trigger: TGTTGTGTTGGAACAGGTAAGACTGCTAGACTGGCACAGAATCGTTGATAGAGGGGCCCACAGGAGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 72 bp ATTTGCTGGCTGGTCTTGTCCTGGTTCACTACCACCTaGTTCTTGATGTTGCGGGCCCGATTGGCATATTTG +
Preference number: 6 (lower is better)
Translates to: ICWLVLSWFTTT*FLMLRARLAYL
Trigger: CAAATATGCCAATCGGGCCCGCAACATCAAGAACAAGGTGGTAGTGAACCAGGACAAGACCAGCCAGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
ENST00000534043.1
CDS TCA 72 bp ATCTTGAGGGCTCAGACTATGCTTGATTCACATGGGTaGGTCCCTAATAGTAAGCAGCATGCCTGGCACACA +
Preference number: 6 (lower is better)
Translates to: ILRAQTMLDSHG*VPNSKQHAWHT
Trigger: TGTGTGCCAGGCATGCTGCTTACTATTAGGGACTCACCCATGTGAATCAAGCATAGTCTGAGCCCTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 72 bp GATGAGCTTGCTCACACAGGTGGAATAGATCTGTTCTaGCCAGGTGTCCAGGTCGAAGACAAAGTCATAGGT +
Preference number: 6 (lower is better)
Translates to: DELAHTGGIDLF*PGVQVEDKVIG
Trigger: ACCTATGACTTTGTCTTCGACCTGGACACCTGGCAAGAACAGATCTATTCCACCTGTGTGAGCAAGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332129.6
ENST00000360529.9
ENST00000422435.2
ENST00000461742.7
CDS CAA 72 bp GTGCAAGCCAAACCTAAACTCATCCATGTGCCAGATTaGGGCCATGGGCTACCAATTGGTGACTTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: VQAKPKLIHVPD*GHGLPIGDFCL
Trigger: AAGACAGAAGTCACCAATTGGTAGCCCATGGCCCAAATCTGGCACATGGATGAGTTTAGGTTTGGCTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS TCA 72 bp GTCTTACCTGTTCCAACACAACACATTCAGCAGATATaGAAACACCCTGGAGAGTGTCTGCCCTGTGCACAA +
Preference number: 6 (lower is better)
Translates to: VLPVPTQHIQQI*KHPGECLPCAQ
Trigger: TTGTGCACAGGGCAGACACTCTCCAGGGTGTTTTCATATCTGCTGAATGTGTTGTGTTGGAACAGGTAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS GCA 72 bp ACATTCAGCAGATATGAAAACACCCTGGAGAGTGTCTaGCCTGTGCACAAGATCTATGCAACAAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: TFSRYENTLESV*PVHKIYATKAG
Trigger: CCCAGCTTTTGTTGCATAGATCTTGTGCACAGGGCAGACACTCTCCAGGGTGTTTTCATATCTGCTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp TGCAAGCCAAACCTAAACTCATCCATGTGCCAGATTTaGGCCATGGGCTACCAATTGGTGACTTCTGTCTTA +
Preference number: 6 (lower is better)
Translates to: CKPNLNSSMCQI*AMGYQLVTSVL
Trigger: TAAGACAGAAGTCACCAATTGGTAGCCCATGGCCCAAATCTGGCACATGGATGAGTTTAGGTTTGGCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp TCCAACACAACACATTCAGCAGATATGAAAACACCCTaGAGAGTGTCTGCCCTGTGCACAAGATCTATGCAA +
Preference number: 6 (lower is better)
Translates to: SNTTHSADMKTP*RVSALCTRSMQ
Trigger: TTGCATAGATCTTGTGCACAGGGCAGACACTCTCCAGGGTGTTTTCATATCTGCTGAATGTGTTGTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CCA 72 bp AAATGCATAAATGAGTTGAACTATGAATTGACTGGCTaGCTTAGTCCACCTGATACTCTGGGGTGGATGTCG +
Preference number: 6 (lower is better)
Translates to: KCINELNYELTG*LSPPDTLGWMS
Trigger: CGACATCCACCCCAGAGTATCAGGTGGACTAAGCCAGCCAGTCAATTCATAGTTCAACTCATTTATGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 90 bp TTAAAACAAGTGCAAGCCAAACCTAAACTCATCCATGTGCCAGATTaGGGCCATGGGCTACCAATTGGTGACTTCTGTCTTAGTCACATA +
Preference number: 6 (lower is better)
Translates to: LKQVQAKPKLIHVPD*GHGLPIGDFCLSHI
Trigger: TATGTGACTAAGACAGAAGTCACCAATTGGTAGCCCATGGCCCAAATCTGGCACATGGATGAGTTTAGGTTTGGCTTGCACTTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS TCA 72 bp GAGCCCTTCTTTCTTGGACTTAGTATTCTAAAATCTTaGGGGCTCAGACTATGCTTGATTCACATGGGTGAG +
Preference number: 6 (lower is better)
Translates to: EPFFLGLSILKS*GLRLCLIHMGE
Trigger: CTCACCCATGTGAATCAAGCATAGTCTGAGCCCTCAAGATTTTAGAATACTAAGTCCAAGAAAGAAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534043.1
CDS CAA 90 bp GGGAGAGGCGATTTTAATCTTTCACTTCATATAGTGATGTATTGTTaGCATGTTGAACAAGAAGGATGTGTTCATGTATTACTTGTGCCA +
Preference number: 6 (lower is better)
Translates to: GRGDFNLSLHIVMYC*HVEQEGCVHVLLVP
Trigger: TGGCACAAGTAATACATGAACACATCCTTCTTGTTCAACATGCAAACAATACATCACTATATGAAGTGAAAGATTAAAATCGCCTCTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534043.1