RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF20B (Homo sapiens)

Ensembl gene IDs: ENSG00000138182

Ensembl transcript IDs: ENST00000260753.8, ENST00000371728.8, ENST00000447580.1, ENST00000478929.1

Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCAAAGGAAAAATGCTTaGGGGGATGGATACCTCATT +
Preference number: 2 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRQRKNA*GDGYLI
Trigger: AATGAGGTATCCATCCCCTCAAGCATTTTTCCTTTG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGTATTTCACATTGCATaGCTGTGTCAAAACATCTCA +
Preference number: 2 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRVFHIA*LCQNIS
Trigger: TGAGATGTTTTGACACAGGCATGCAATGTGAAATAC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGACACGTATTTCACATTaGATGCCTGTGTCAAAACAT +
Preference number: 2 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRTRISH*MPVSKH
Trigger: ATGTTTTGACACAGGCATGCAATGTGAAATACGTGT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCAAAGGAAAAATGCTaGAGGGGATGGATACCTCAT +
Preference number: 3 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSKEKC*RGWIPH
Trigger: ATGAGGTATCCATCCCCTCAAGCATTTTTCCTTTGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR CCA 72 bp AATCAATTGACCTCATGGGCATACAGAGTAGAAGAATaGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGC +
Preference number: 3 (lower is better)
Translates to: NQLTSWAYRVEE*LPVAGKGTDGC
Trigger: GCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTATGCCCATGAGGTCAATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTACACGTATTTCACATaGCATGCCTGTGTCAAAACA +
Preference number: 3 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRYTYFT*HACVKT
Trigger: TGTTTTGACACAGGCATGCAATGTGAAATACGTGTA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR GCA 72 bp GGATACCTCATTCTCCATGATACACGTATTTCACATTaGATGCCTGTGTCAAAACATCTCACATACCCCGTA +
Preference number: 3 (lower is better)
Translates to: GYLILHDTRISH*MPVSKHLTYPV
Trigger: TACGGGGTATGTGAGATGTTTTGACACAGGCATGCAATGTGAAATACGTGTATCATGGAGAATGAGGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
3UTR TCA 72 bp GTAATTGGATTATCTGTAATTCAAAGGAAAAATGCTTaGGGGGATGGATACCTCATTCTCCATGATACACGT +
Preference number: 3 (lower is better)
Translates to: VIGLSVIQRKNA*GDGYLILHDTR
Trigger: ACGTGTATCATGGAGAATGAGGTATCCATCCCCTCAAGCATTTTTCCTTTGAATTACAGATAATCCAATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTGCAAACTTCGCCTaGCTAGCCAGACCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSANFA*LARPAS
Trigger: GCTCGCGGGTCTGGCTAGTCAGGCGAAGTTTGCAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAGGGTACTGACGGTTaGAGGGGGAGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKGTDG*RGRWGW
Trigger: CCATCCCCACCTCCCCCTGCAACCGTCAGTACCCTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGTTGCAGGGGGAGGTaGGGATGGTTAATGGGTACA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGCRGR*GWLMGT
Trigger: TGTACCCATTAACCATCCCCACCTCCCCCTGCAACC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCAAGCAGTAGCTTCCTaGGGGTCAGGAAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRQAVAS*GSGRDA
Trigger: TGCATCTCTTCCTGACCCCCAGGAAGCTACTGCTTG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAAGCTGCAACCAGTTaGTCTCGTTCTTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKAATS*SRSSRH
Trigger: GTGGCGAGAAGAACGAGATCAACTGGTTGCAGCTTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGACCCGCGAGCAGCACTaGGATGTTACCGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRTREQH*DVTVFK
Trigger: TTTGAAAACGGTAACATCGCAGTGCTGCTCGCGGGT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTCAAATTCAAACAATaGCGGCCAGGGCACCGCACT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFKFKQ*RPGHRT
Trigger: AGTGCGGTGCCCTGGCCGCCATTGTTTGAATTTGAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTCCTCAGAACCATTTaGCAGATCCCTGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLLRTI*QIPEIE
Trigger: CTCAATCTCAGGGATCTGTCAAATGGTTCTGAGGAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGTACGAGCAGAGCTTaGAGAGAGTTCCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGTSRA*REFLFQ
Trigger: TTGAAAGAGGAACTCTCTGCAAGCTCTGCTCGTACC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTGCTTTCAGATTCTaGGTACGAGCAGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSAFRF*VRAELA
Trigger: TGCAAGCTCTGCTCGTACCCAGAATCTGAAAGCAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAGAATGGTTACCAGTaGCTGGTAAGGGTACTGACG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKNGYQ*LVRVLT
Trigger: CGTCAGTACCCTTACCAGCCACTGGTAACCATTCTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCAGCACAACAGTCTGTaGATCCAGAATATGCACACA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRQHNSL*IQNMHT
Trigger: TGTGTGCATATTCTGGATTCACAGACTGTTGTGCTG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGTCTTCAGTGATAGCTaGACTAACATGGATAGACCC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRVFSDS*TNMDRP
Trigger: GGGTCTATCCATGTTAGTTCAGCTATCACTGAAGAC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGACCTTGTGTAAGTTCTaGAAGCGCTCTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRTLCKF*KRSLSF
Trigger: GAAGGAAAGAGAGCGCTTTCAGAACTTACACAAGGT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGCTCCTTGAGTTGCTaGATGGTTCGCTGTTTCATA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCSLSC*MVRCFI
Trigger: TATGAAACAGCGAACCATTCAGCAACTCAAGGAGCA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGTGAATCCAGAATATaGACACAGCCCTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCESRI*TQPSDS
Trigger: TGAGTCTGAGGGCTGTGTGCATATTCTGGATTCACA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTAACCGACCAAGGATaGATTGAGGCTCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLTDQG*IEALSA
Trigger: TGCTGAAAGAGCCTCAATGCATCCTTGGTCGGTTAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTCCTTCTGTGTAGTTaGTGGGCCAAAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFLLCS*WAKNLG
Trigger: TCCAAGGTTTTTGGCCCAGCAACTACACAGAAGGAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTTCCTCTGAAGATCTaGTTTCAGATTCTGGGTACG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLPLKI*FQILGT
Trigger: CGTACCCAGAATCTGAAAGCAGATCTTCAGAGGAAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCCCTTTCTTTGCTGGTaGTTCATCTTGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRPFLCW*FILLKF
Trigger: GAACTTCAGCAAGATGAACCACCAGCAAAGAAAGGG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAGACCCTTTCTTTGCTaGTGGTTCATCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRRPFLC*WFILLK
Trigger: CTTCAGCAAGATGAACCACCAGCAAAGAAAGGGTCT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAATCTTAACTGTCACTaGTGTGGTACAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRNLNCH*CGTTRV
Trigger: CACCCTGGTTGTACCACACCAGTGACAGTTAAGATT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAACCTTGGAAAAACTaGATTTCTGTGCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKPWKN*ISVPSA
Trigger: GGCAGATGGCACAGAAATTCAGTTTTTCCAAGGTTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTTCTTCCTTCCTCTaGAGATCTGCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSSSFL*RSAFRF
Trigger: GAATCTGAAAGCAGATCTTCAGAGGAAGGAAGAAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTATTTAACTGCTCCTTaGGTTGCTGAATGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRYLTAP*VAEWFA
Trigger: AGCGAACCATTCAGCAACTCAAGGAGCAGTTAAATA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTTCTCGCCACTTTTaGAGGTCACTATCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSSRHF*RSLSFS
Trigger: AGAGAAAGATAGTGACCTTCAAAAGTGGCGAGAAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTTGTCAGGATCTGCTaGACTAATACGTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFVRIC*TNTFGL
Trigger: AAGCCCAAACGTATTAGTTCAGCAGATCCTGACAAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGATAGAGGTTCAGTTTaGAGTTTGTCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRDRGSV*SLSGSA
Trigger: AGCAGATCCTGACAAACTTCAAACTGAACCTCTATC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGATGTCTTCAATTTCTaGAATGTTCGGTCGCACTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRDVFNF*NVRSHF
Trigger: GAAGTGCGACCGAACATTGCAGAAATTGAAGACATC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTTCTGTGTAGTTGCTaGGCCAAAAACCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLLCSC*AKNLGK
Trigger: TTTTCCAAGGTTTTTGGCCCAGCAACTACACAGAAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCAAGAGGTCTTTTACTaGTTGCATAATGCAACCCTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRQEVFY*LHNATL
Trigger: CAGGGTTGCATTATGCAACCAGTAAAAGACCTCTTG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGTTTACACCAATTATaGATGCCTGACTCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGLHQL*MPDSVK
Trigger: CTTTACGGAGTCAGGCATCCATAATTGGTGTAAACC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATCGAAATTTATTTCTaGAGGCCTTGCAATTGGGTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRIEIYF*RPCNWV
Trigger: GACCCAATTGCAAGGCCTTCAGAAATAAATTTCGAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCATTATTCAATTTTGTaGAGGCAACACTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRHYSIL*RQHSGA
Trigger: AGCACCAGAGTGTTGCCTTCACAAAATTGAATAATG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTAGTGATACATCTTaGGAAGATTTGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSSDTS*EDLTGP
Trigger: TGGACCTGTCAAATCTTCTCAAGATGTATCACTAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAATATCTCTCGTTCTTaGAGCAGAGTCTCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRNISRS*SRVSLK
Trigger: CTTTAAGGAGACTCTGCTTCAAGAACGAGAGATATT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGCTTCTTCCACTTTCTaGTTATTTAACTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRASSTF*LFNCSL
Trigger: CAAGGAGCAGTTAAATAATCAGAAAGTGGAAGAAGC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCCTGTAACTCATCTTaGAGATTAGTGAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSCNSS*RLVSFP
Trigger: TGGAAAGCTCACTAATCTTCAAGATGAGTTACAGGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGAAATCGAGTGCTTTaGTCATTTTCTGTTGACACT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGNRVL*SFSVDT
Trigger: AGTGTCAACAGAAAATGATCAAAGCACTCGATTTCC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCCAATTATGGATGCCTaGCTCCGTAAAGAATATGTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRPIMDA*LRKEYV
Trigger: AACATATTCTTTACGGAGTCAGGCATCCATAATTGG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCGTTTGATAATCTGGTaGTCACTCTCCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRRLIIW*SLSFIF
Trigger: GAAAATGAAGGAGAGTGATCACCAGATTATCAAACG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAGATTCGAAACTGTTTaGCTCAGTATTTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRRFETV*LSIWSN
Trigger: GTTGCTCCAAATACTGAGGCAAACAGTTTCGAATCT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAGTTCGAGGCAGAATaGCAATATTTTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKFEAE*QYFLLS
Trigger: GGACAGAAGAAAATATTGGCATTCTGCCTCGAACTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGACACAAACTTTTTGTaGAATGGCGGAGAACTTCAA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRDTNFL*NGGELQ
Trigger: TTGAAGTTCTCCGCCATTGCACAAAAAGTTTGTGTC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGACTAAAAACATAAGATaGTCGAGGTACTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRTKNIR*SRYSLL
Trigger: CAAGAGGGAGTACCTCGACCATCTTATGTTTTTAGT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATTTTTCCAATTCTGTaGCCAGCCTTTCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRIFPIL*PAFQLP
Trigger: AGGAAGTTGAAAGGCTGGCCACAGAATTGGAAAAAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCGAGGTACTCCCTCTTaGTTAAAATTAGATTCCATT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRRGTPS*LKLDSI
Trigger: AATGGAATCTAATTTTAATCAAGAGGGAGTACCTCG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGATGTCTCAAGCTCTTaGATCAATGAATCTGATTCA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRDVSSS*INESDS
Trigger: TGAATCAGATTCATTGATTCAAGAGCTTGAGACATC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGTGGTTCATCTTGCTaGAGTTCATTTTCATTTACT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGGSSC*SSFSFT
Trigger: AGTAAATGAAAATGAACTTCAGCAAGATGAACCACC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTGCTTCTTTCGCTTaGGTGATAAGCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSASFA*VISIIF
Trigger: AAAAATGATGCTTATCACTCAAGCGAAAGAAGCAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATATGTTTTCTTAGATaGTGGACGTATGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRICFLR*WTYGNL
Trigger: AAGGTTGCCATACGTCCATCATCTAAGAAAACATAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTGGCTCGTTTTGGTTaGGACACATTTTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLARFG*DTFSLL
Trigger: AAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR TCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGATGCAATATATAAGTaGGCAATTTCAGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRDAIYK*AISACF
Trigger: GAAACAGGCTGAAATTGCTCACTTATATATTGCATC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAATTTGCCGAAGCAATaGACTTTTGCTAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRNLPKQ*TFASNF
Trigger: GAAATTGCTAGCAAAAGTGCATTGCTTCGGCAAATT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGTAACCTCTTTAATTTaGCGAAGCAATGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRVTSLI*RSNALL
Trigger: CAAAAGTGCATTGCTTCGGCAAATTAAAGAGGTTAC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGTACTTGCTTAATCTaGTTTTTGGCATCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCTCLI*FLASVS
Trigger: ACTGACTGATGCCAAAAAGCAGATTAAGCAAGTACA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATAGCTGAACTAACATaGATAGACCCTTTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRIAELT*IDPFFA
Trigger: AGCAAAGAAAGGGTCTATCCATGTTAGTTCAGCTAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTTAGTAGGTCATCTTaGTTTTTATGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFSRSS*FLCSFS
Trigger: GGAGAAGGAGCATAAAAACCAAGATGACCTACTAAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTGTTTCTTGCCTGTTaGTTTCTTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLFLAC*FLLLLL
Trigger: AAGAAGAAGAAGAAGAAACCAACAGGCAAGAAACAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGTATAATTTCCGTTTaGCTCGTTTTGGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCIISV*LVLVET
Trigger: TGTCTCAACCAAAACGAGCCAAACGGAAATTATACA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAGGCAACACTCTGGTaGTTTATTCCTAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKATLW*FIPSFK
Trigger: TTTAAAACTAGGAATAAAGCACCAGAGTGTTGCCTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR GCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATTTCGTATATTCTCTaGTTCTTTCGCTTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRISYIL*FFRLSD
Trigger: ATCACTCAAGCGAAAGAAGCAGAGAATATACGAAAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTCTCTGGATCTATGTaGTTTAAGGTTCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFSGSM*FKVHLC
Trigger: ACAAAGATGAACCTTAAACCACATAGATCCAGAGAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGCTGTGACTTCTACTaGAAGCATTATTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCCDFY*KHYSIL
Trigger: CAAAATTGAATAATGCTTCCAGTAGAAGTCACAGCA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAACTTTTTGTGCAATaGCGGAGAACTTCAATACAT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKLFVQ*RRTSIH
Trigger: ATGTATTGAAGTTCTCCGCCATTGCACAAAAAGTTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTTCTTTTCTCCTCGTaGCTAATGAAAGCCTTATTT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFLFSS*LMKALF
Trigger: AAATAAGGCTTTCATTAGCCACGAGGAGAAAAGAAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGCTTCAATACTAGAGTaGAAAGAATTTTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRASILE*KEFSLL
Trigger: CAATAGGGAAAATTCTTTCCACTCTAGTATTGAAGC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CCA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTTTCTGTACATTACTaGATATCAGTGCTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLSVHY*ISVLLA
Trigger: AGCTAAAAGCACTGATATCCAGTAATGTACAGAAAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS GCA 90 bp CCATTCTGCAAACTTCGCCTGACTAGCCAGACCCGCGAGCAGCACTaGGATGTTACCGTTTTCAAATTCAAACAATGGCGGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: PFCKLRLTSQTREQH*DVTVFKFKQWRPGH
Trigger: GTGCCCTGGCCGCCATTGTTTGAATTTGAAAACGGTAACATCGCAGTGCTGCTCGCGGGTCTGGCTAGTCAGGCGAAGTTTGCAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCCGACCAAGGATGCATaGAGGCTCTTTCAGCACAAC +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRPTKDA*RLFQHN
Trigger: GTTGTGCTGAAAGAGCCTCAATGCATCCTTGGTCGG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGGTACGAGCAGAGCTaGCAGAGAGTTCCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGYEQS*QRVPLS
Trigger: TGAAAGAGGAACTCTCTGCAAGCTCTGCTCGTACCC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGATAGCCCTTTACGTCTaGGGAAAGGCGCAGCATCTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRIALYV*GKAQHL
Trigger: AAGATGCTGCGCCTTTCCCAAGACGTAAAGGGCTAT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTCCTCTTCCGAGCCTaGGGAATCTTAACTGTCACT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFLFRA*GILTVT
Trigger: AGTGACAGTTAAGATTCCCAAGGCTCGGAAGAGGAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGGGACACAAACTTTTaGTGCAATGGCGGAGAACTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRWDTNF*CNGGEL
Trigger: AAGTTCTCCGCCATTGCACAAAAAGTTTGTGTCCCA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAAAGTCAGCTTCCCGTaGAGCCCAATACTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRKVSFP*SPILSK
Trigger: TTTACTCAGTATTGGGCTCAACGGGAAGCTGACTTT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTTAGCCTCAAGCACTaGATCCTGTTCTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFSLKH*ILFYLS
Trigger: ACTCAGGTAGAACAGGATCAAGTGCTTGAGGCTAAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS CCA 90 bp TTCATTACTCTTCCTCTTCCGAGCCTTGGGAATCTTAACTGTCACTaGTGTGGTACAACCAGGGTGTTTCACTGCCATTTTGTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: FITLPLPSLGNLNCH*CGTTRVFHCHFVWL
Trigger: CAGCCAAACAAAATGGCAGTGAAACACCCTGGTTGTACCACACCAGTGACAGTTAAGATTCCCAAGGCTCGGAAGAGGAAGAGTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGCTGGGCCAAAAACCTaGGAAAAACTGAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRAGPKT*EKLNFC
Trigger: ACAGAAATTCAGTTTTTCCAAGGTTTTTGGCCCAGC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGAGGTCTTTTACTGGTaGCATAATGCAACCCTGAAA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCREVFYW*HNATLK
Trigger: TTTCAGGGTTGCATTATGCAACCAGTAAAAGACCTC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTACCAACCAAATCCTaGAAGATAGCCAAACGACGT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLPTKS*KIAKRR
Trigger: ACGTCGTTTGGCTATCTTCAAGGATTTGGTTGGTAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGGTCTAACTGTGTATTaGGCAAATTATCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRGLTVY*ANYPPQ
Trigger: CTGAGGAGGATAATTTGCCAAATACACAGTTAGACC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTTCTTCTCGCCACTTTaGAAGGTCACTATCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRFFSPL*KVTIFL
Trigger: GAGAAAGATAGTGACCTTCAAAAGTGGCGAGAAGAA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCCGTTTGGCTCGTTTaGGTTGAGACACATTTTCTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSVWLV*VETHFL
Trigger: AAGAAAATGTGTCTCAACCAAAACGAGCCAAACGGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS GCA 90 bp TTTCTCTTTCAGGTCAGCATAATCTTCTTCCTTCCTCTGAAGATCTaGTTTCAGATTCTGGGTACGAGCAGAGCTTGCAGAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: FLFQVSIIFFLPLKI*FQILGTSRACREFL
Trigger: GAGGAACTCTCTGCAAGCTCTGCTCGTACCCAGAATCTGAAAGCAGATCTTCAGAGGAAGGAAGAAGATTATGCTGACCTGAAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCGAAGCAATGCACTTTaGCTAGCAATTTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRRSNAL*LAISSF
Trigger: GAAAGAAGAAATTGCTAGCAAAAGTGCATTGCTTCG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTTCAGTTTCAACTTTaGTGGCACAAATGTCTTTCG +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLQFQL*WHKCLS
Trigger: CGAAAGACATTTGTGCCACAAAAGTTGAAACTGAAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGCTTAATCTGCTTTTaGGCATCAGTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCLICF*ASVSFS
Trigger: AGAGAAACTGACTGATGCCAAAAAGCAGATTAAGCA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGCTCTCTCATACTGTaGTATAGCTTCTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCSLIL*YSFFHF
Trigger: AAAGTGGAAGAAGCTATACAACAGTATGAGAGAGCA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTCTGCTTCTTTCGCTaGAGTGATAAGCATCATTTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLCFFR*SDKHHF
Trigger: AAAATGATGCTTATCACTCAAGCGAAAGAAGCAGAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGCTGAACTAATACGTTaGGGCTTGATATCCATGATT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRAELIR*GLISMI
Trigger: AATCATGGATATCAAGCCCAAACGTATTAGTTCAGC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCTCTAACTCAGGTTTaGGAAATCGAGTGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSLTQV*EIECFD
Trigger: ATCAAAGCACTCGATTTCCAAAACCTGAGTTAGAGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGTTTCACTGCCATTTaGTTTGGCTGTAAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCFTAI*FGCKGV
Trigger: TACACCTTTACAGCCAAACAAAATGGCAGTGAAACA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTCGAGGTACTCCCTCTaGATTAAAATTAGATTCCAT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSRYSL*IKIRFH
Trigger: ATGGAATCTAATTTTAATCAAGAGGGAGTACCTCGA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGTGTTTGCCTCAGTATTaGGAGCAACTAAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRCLPQY*EQLRKI
Trigger: AATTTTCCTTAGTTGCTCCAAATACTGAGGCAAACA...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGAGTAACCTCTTTAATTaGCCGAAGCAATGCACTTTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRSNLFN*PKQCTF
Trigger: AAAAGTGCATTGCTTCGGCAAATTAAAGAGGTTACT...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGTCAATAAAGAAGTGTaGATATTCCCAGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRVNKEV*IFPVSL
Trigger: AAGAGAGACTGGGAATATCAACACTTCTTTATTGAC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGAAGATGTATCAGCCTaGTCATTGCATTTAAATGTG +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCREDVSA*SLHLNV
Trigger: CACATTTAAATGCAATGACAAGGCTGATACATCTTC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGGAACAGATTTTAGATTaGCTGTCCTTAGGTACTTCA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCREQILD*LSLGTS
Trigger: TGAAGTACCTAAGGACAGCAAATCTAAAATCTGTTC...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCAATTTTTCTGTTTCTaGCCTGTTGGTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRQFFCF*PVGFFF
Trigger: GAAGAAGAAACCAACAGGCAAGAAACAGAAAAATTG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCCAAGCACATCTGTGTaGTTCTCATGTTCTTTATTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRPSTSV*FSCSLF
Trigger: AAATAAAGAACATGAGAACAACACAGATGTGCTTGG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTAATACGTTTGGGCTaGATATCCATGATTTGTGTT +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLIRLG*ISMICV
Trigger: AACACAAATCATGGATATCAAGCCCAAACGTATTAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS-3UTR CAA 90 bp TACAGAGTAGAAGAATGGTTACCAGTGGCTGGTAAGGGTACTGACGGTTGCAGGCTACATTTGAGAGCTTaGAAGAGCTCATTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: YRVEEWLPVAGKGTDGCRLHLRA*KSSLFQ
Trigger: TTGAAACAATGAGCTCTTCAAAGCTCTCAAATGTAG...CCTGCAACCGTCAGTACCCTTACCAGCCACTGGTAACCATTCTTCTACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS CCA 90 bp GTAAGTAAAAATCAGACGACTCTGTCCTTTCAAGAGGTCTTTTACTaGTTGCATAATGCAACCCTGAAAGAATTCCTTCTGTGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: VSKNQTTLSFQEVFY*LHNATLKEFLLCSC
Trigger: GCAACTACACAGAAGGAATTCTTTCAGGGTTGCATTATGCAACCAGTAAAAGACCTCTTGAAAGGACAGAGTCGTCTGATTTTTACTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS TCA 90 bp CCATTTGACAGATCCCTGAGATTGAGCAAATCTATGTTTGAAATCTaGGAAACTGAATCAAGAGTACGTAGTTCGTCTATTTTCGTGTGC +
Preference number: 5 (lower is better)
Translates to: PFDRSLRLSKSMFEI*ETESRVRSSSIFVC
Trigger: GCACACGAAAATAGACGAACTACGTACTCTTGATTCAGTTTCTCAGATTTCAAACATAGATTTGCTCAATCTCAGGGATCTGTCAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS TCA 90 bp AAATTCATGAGACAGATCAAGCTTAATGCCATCGAAATTTATTTCTaGAGGCCTTGCAATTGGGTCAGCACTAAAAACATAAGATGGTCG +
Preference number: 5 (lower is better)
Translates to: KFMRQIKLNAIEIYF*RPCNWVSTKNIRWS
Trigger: CGACCATCTTATGTTTTTAGTGCTGACCCAATTGCAAGGCCTTCAGAAATAAATTTCGATGGCATTAAGCTTGATCTGTCTCATGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS TCA 90 bp TCGAAACTGTTTGCCTCAGTATTTGGAGCAACTAAGGAAAATTCATaGGACAGATCAAGCTTAATGCCATCGAAATTTATTTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SKLFASVFGATKENS*DRSSLMPSKFISEG
Trigger: GCCTTCAGAAATAAATTTCGATGGCATTAAGCTTGATCTGTCTCATGAATTTTCCTTAGTTGCTCCAAATACTGAGGCAAACAGTTTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS GCA 72 bp AAACTTCGCCTGACTAGCCAGACCCGCGAGCAGCACTaGGATGTTACCGTTTTCAAATTCAAACAATGGCGG +
Preference number: 6 (lower is better)
Translates to: KLRLTSQTREQH*DVTVFKFKQWR
Trigger: CCGCCATTGTTTGAATTTGAAAACGGTAACATCGCAGTGCTGCTCGCGGGTCTGGCTAGTCAGGCGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371728.8
CDS CCA 72 bp CTTCCTCTTCCGAGCCTTGGGAATCTTAACTGTCACTaGTGTGGTACAACCAGGGTGTTTCACTGCCATTTT +
Preference number: 6 (lower is better)
Translates to: LPLPSLGNLNCH*CGTTRVFHCHF
Trigger: AAAATGGCAGTGAAACACCCTGGTTGTACCACACCAGTGACAGTTAAGATTCCCAAGGCTCGGAAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS CAA 72 bp AGCTGCAACCAGTTGATCTCGTTCTTCTCGCCACTTTaGAAGGTCACTATCTTTCTCTGTCAGCTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: SCNQLISFFSPL*KVTIFLCQLGC
Trigger: ACAGCCCAGCTGACAGAGAAAGATAGTGACCTTCAAAAGTGGCGAGAAGAACGAGATCAACTGGTTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS TCA 72 bp AAGGATGCATTGAGGCTCTTTCAGCACAACAGTCTGTaGATCCAGAATATGCACACAGCCCTCAGACTCAAG +
Preference number: 6 (lower is better)
Translates to: KDALRLFQHNSL*IQNMHTALRLK
Trigger: CTTGAGTCTGAGGGCTGTGTGCATATTCTGGATTCACAGACTGTTGTGCTGAAAGAGCCTCAATGCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS GCA 72 bp CAGGTCAGCATAATCTTCTTCCTTCCTCTGAAGATCTaGTTTCAGATTCTGGGTACGAGCAGAGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: QVSIIFFLPLKI*FQILGTSRACR
Trigger: TCTGCAAGCTCTGCTCGTACCCAGAATCTGAAAGCAGATCTTCAGAGGAAGGAAGAAGATTATGCTGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS CAA 72 bp GCTTCTTCTCGAGTGTCACATTTACCAACCAAATCCTaGAAGATAGCCAAACGACGTTCAGCATTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ASSRVSHLPTKS*KIAKRRSAFSS
Trigger: AGAAGAAAATGCTGAACGTCGTTTGGCTATCTTCAAGGATTTGGTTGGTAAATGTGACACTCGAGAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS CAA 90 bp AGTAAAAATCAGACGACTCTGTCCTTTCAAGAGGTCTTTTACTGGTaGCATAATGCAACCCTGAAAGAATTCCTTCTGTGTAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SKNQTTLSFQEVFYW*HNATLKEFLLCSCW
Trigger: CCAGCAACTACACAGAAGGAATTCTTTCAGGGTTGCATTATGCAACCAGTAAAAGACCTCTTGAAAGGACAGAGTCGTCTGATTTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS CAA 90 bp TCTTTCGCTGCTTCTTCTCGAGTGTCACATTTACCAACCAAATCCTaGAAGATAGCCAAACGACGTTCAGCATTTTCTTCTAATATCTCT +
Preference number: 6 (lower is better)
Translates to: SFAASSRVSHLPTKS*KIAKRRSAFSSNIS
Trigger: AGAGATATTAGAAGAAAATGCTGAACGTCGTTTGGCTATCTTCAAGGATTTGGTTGGTAAATGTGACACTCGAGAAGAAGCAGCGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS CCA 72 bp AGGCCTTGCAATTGGGTCAGCACTAAAAACATAAGATaGTCGAGGTACTCCCTCTTGATTAAAATTAGATTC +
Preference number: 6 (lower is better)
Translates to: RPCNWVSTKNIR*SRYSLLIKIRF
Trigger: GAATCTAATTTTAATCAAGAGGGAGTACCTCGACCATCTTATGTTTTTAGTGCTGACCCAATTGCAAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS CAA 90 bp TCTCTAACTCAGGTTTTGGAAATCGAGTGCTTTGATCATTTTCTGTaGACACTTCACAAGAGTCAAGGACTACAGATCCATCCTCTATTT +
Preference number: 6 (lower is better)
Translates to: SLTQVLEIECFDHFL*TLHKSQGLQIHPLF
Trigger: AAATAGAGGATGGATCTGTAGTCCTTGACTCTTGTGAAGTGTCAACAGAAAATGATCAAAGCACTCGATTTCCAAAACCTGAGTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS TCA 72 bp TTTTGCCTTATAGCAAGTAACACCTTGTGTAAGTTCTaGAAGCGCTCTCTTTCCTTCAACTACATGCTGTAT +
Preference number: 6 (lower is better)
Translates to: FCLIASNTLCKF*KRSLSFNYMLY
Trigger: ATACAGCATGTAGTTGAAGGAAAGAGAGCGCTTTCAGAACTTACACAAGGTGTTACTTGCTATAAGGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS TCA 72 bp AGACAGATCAAGCTTAATGCCATCGAAATTTATTTCTaGAGGCCTTGCAATTGGGTCAGCACTAAAAACATA +
Preference number: 6 (lower is better)
Translates to: RQIKLNAIEIYF*RPCNWVSTKNI
Trigger: TATGTTTTTAGTGCTGACCCAATTGCAAGGCCTTCAGAAATAAATTTCGATGGCATTAAGCTTGATCTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000447580.1
CDS TCA 72 bp CTGGAAATTTCAAAACTTGTCGATAGAGGTTCAGTTTaGAGTTTGTCAGGATCTGCTGAACTAATACGTTTG +
Preference number: 6 (lower is better)
Translates to: LEISKLVDRGSV*SLSGSAELIRL
Trigger: CAAACGTATTAGTTCAGCAGATCCTGACAAACTTCAAACTGAACCTCTATCGACAAGTTTTGAAATTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1
CDS CAA 90 bp TCATTATGCACAGTAACCTCTTTAATTTGCCGAAGCAATGCACTTTaGCTAGCAATTTCTTCTTTCTCTTGTTCTGATGATAACCTTAAG +
Preference number: 6 (lower is better)
Translates to: SLCTVTSLICRSNAL*LAISSFSCSDDNLK
Trigger: CTTAAGGTTATCATCAGAACAAGAGAAAGAAGAAATTGCTAGCAAAAGTGCATTGCTTCGGCAAATTAAAGAGGTTACTGTGCATAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS TCA 72 bp TCTAGATCTTCATCAAGAAGTTTAGTTTCCACATTTTaGGTTTCTTCAGCGTTTTCTAGCTCCTCAACCAAA +
Preference number: 6 (lower is better)
Translates to: SRSSSRSLVSTF*VSSAFSSSSTK
Trigger: TTTGGTTGAGGAGCTAGAAAACGCTGAAGAAACTCAAAATGTGGAAACTAAACTTCTTGATGAAGATCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260753.8
ENST00000371728.8
CDS TCA 72 bp AGATCCCTGAGATTGAGCAAATCTATGTTTGAAATCTaGGAAACTGAATCAAGAGTACGTAGTTCGTCTATT +
Preference number: 6 (lower is better)
Translates to: RSLRLSKSMFEI*ETESRVRSSSI
Trigger: AATAGACGAACTACGTACTCTTGATTCAGTTTCTCAGATTTCAAACATAGATTTGCTCAATCTCAGGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260753.8
ENST00000371728.8
ENST00000478929.1