RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF19 (Homo sapiens)

Ensembl gene IDs: ENSG00000196169

Ensembl transcript IDs: ENST00000359939.10, ENST00000389916.5, ENST00000547389.1, ENST00000549637.1, ENST00000551017.1, ENST00000551294.5

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTaGTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: ARAPHVGQEPRLTVS*FPPLPRPRLASGLC
Trigger: GCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR CCA 90 bp CCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTaGCAACAGCATTCTGTCCAGGGCTGGGAAGCCAGGGAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: PPLPRPRLASGLCRF*QQHSVQGWEAREPS
Trigger: GCTGGGCTCCCTGGCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR TCA 90 bp AGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGCCTGCTGAGATCCTaGGCTTACTTCCTGGTCATCTCCATCTGCCCAGCCTCCACCTCC +
Preference number: 1 (lower is better)
Translates to: RPQFLGLRSPGLLRS*AYFLVISICPASTS
Trigger: GGAGGTGGAGGCTGGGCAGATGGAGATGACCAGGAAGTAAGCTCAGGATCTCAGCAGGCCAGGGCTCCTGAGACCCAGGAACTGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR GCA 90 bp AGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTaGAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: SCFPPLPRPRLASGL*RFWQQHSVQGWEAR
Trigger: CCTGGCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR TCA 90 bp TTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGCCTGCTaGGATCCTGAGCTTACTTCCTGGTCATCTCCATCTGCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: LGRDPSSWVSGALAC*DPELTSWSSPSAQP
Trigger: AGGCTGGGCAGATGGAGATGACCAGGAAGTAAGCTCAGGATCTCAGCAGGCCAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR TCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGTTTCCCCAGTGGCACTaGAAGCATGGGAGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: PVGASPTIQDARAPHVGQFPQWH*KHGRVG
Trigger: CCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAA...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR TCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGGGCCTGCTGAGATCCTaGGCTTACTTCCTGGTCATC +
Preference number: 2 (lower is better)
Translates to: PVGASPTIQDARAPHVGQGLLRS*AYFLVI
Trigger: GATGACCAGGAAGTAAGCTCAGGATCTCAGCAGGCC...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CCA 90 bp GTCAGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGAGAGACCCCAGTTCCTaGGTCTCAGGAGCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VSCFPPLPRPRLASGLCRRDPSS*VSGALA
Trigger: GGCCAGGGCTCCTGAGACCCAGGAACTGGGGTCTCT...CCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CCA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGGAGCCCAGCCGTCCTaGCCATGTCCCCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATGAQPS*PCPLAS
Trigger: TGAGGCCAGGGGACATGGCCAGGACGGCTGGGCTCC...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR CAA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTaGGCAACAGCATTCTGTCCAGGGCTGGGAAGCCAGGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SSVTKAEAGLRAVQV*ATAFCPGLGSQGAQ
Trigger: CTGGGCTCCCTGGCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCTGGCCTCAGGGCTGTaGAGGTTTTGGCAACAGCAT +
Preference number: 2 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLLASGL*RFWQQH
Trigger: ATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAG...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACCCTGAGCTTACTTCCTaGTCATCTCCATCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: REVPVGASPTIQDARAPHPELTS*SSPSAQ
Trigger: CTGGGCAGATGGAGATGACCAGGAAGTAAGCTCAGG...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CCA 90 bp GTCAGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGAAAGCATGGGAGGGTTaGGCAGAGACCCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: VSCFPPLPRPRLASGLCRKAWEG*AETPVP
Trigger: AGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTT...CCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR TCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGTTCAGTCTTGGGAGGTaGGAGAGCCAGTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWFSLGR*ESQFQA
Trigger: TGCCTGGAACTGGCTCTCTCACCTCCCAAGACTGAA...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGACCCCATTCAGTCTTaGGAGGTGAGAGAGCCAGTT +
Preference number: 2 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSDPIQS*EVREPV
Trigger: AACTGGCTCTCTCACCTCCCAAGACTGAATGGGGTC...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR GCA 72 bp GCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTaGCCCACACGTGGGCCAGGAGCCCCGTCTCACTGT +
Preference number: 3 (lower is better)
Translates to: ACRRLPNHPGCP*PTRGPGAPSHC
Trigger: ACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR GCA 72 bp CCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTaGTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: PHVGQEPRLTVS*FPPLPRPRLAS
Trigger: TGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR CCA 72 bp CCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTaGCAACAGCATTCTGTCCAGGGCTGGGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: PRPRLASGLCRF*QQHSVQGWEAR
Trigger: CCTGGCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR-3UTR CAA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGAAAGCATGGGAGGGTaGGGCAGAGACCCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: SPIVIREVPVGASPTIQDESMGG*GRDPSS
Trigger: GGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR TCA 72 bp ATTCCCTCCCTCACCCACATCCCCAATTGTAATACGTaGAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGA +
Preference number: 3 (lower is better)
Translates to: IPSLTHIPNCNT*SACRRLPNHPG
Trigger: TCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGTGGGTGAGGGAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGGCAGGCCAGTGGGCCTaGTGGCCGCGCATCGTCGCC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGAGQWA*WPRIVA
Trigger: GGCGACGATGCGCGGCCACCAGGCCCACTGGCCTGC...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGGCTGGGCGGCCGCTTaGAGGCCAGTGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWGWAAA*RPVGLV
Trigger: CACCAGGCCCACTGGCCTGCAAGCGGCCGCCCAGCC...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCGCTTGCAGGCCAGTaGGCCTGGTGGCCGCGCATC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGPLAGQ*AWWPRI
Trigger: GATGCGCGGCCACCAGGCCCACTGGCCTGCAAGCGG...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGGGAGCCCAGCCGTCCTaGCCATGTCCCCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQGAQPS*PCPLAS
Trigger: TGAGGCCAGGGGACATGGCCAGGACGGCTGGGCTCC...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGCAGCCAGGTCGATCATaGACAGGCGGCCCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQQPGRS*TGGPAA
Trigger: TGCGGCAGGGCCGCCTGTTCATGATCGACCTGGCTG...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCTGGGGCCGTCCCCATaGTGTCCGACTGCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWLGPSP*CPTARD
Trigger: GTCCCGGGCAGTCGGACATCATGGGGACGGCCCCAG...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGCAGAGACTGCGGTGCTaGTCCAGGCGGCGCACGGCC +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPQRLRC*SRRRTA
Trigger: GGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTG...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGTCTCGTCGCAGAGACTaGGGTGCTGCTCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQSRRRD*GAAPGG
Trigger: GCCGCCTGGAGCAGCACCGCAGTCTCTGCGACGAGA...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCGCTCTGTCGCGGGTaGCAGCAGGTGTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVALCRG*QQVSPL
Trigger: GAGGGGCGACACCTGCTGGCACCCGCGACAGAGCGC...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCCCATGATGTCCGACTaGCCGGGACGGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLPMMSD*PGRGLA
Trigger: GGCGAGGCCCCGTCCCGGGCAGTCGGACATCATGGG...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGGCTCCTGGAAGGCGCTaGCGAGCTGCTCCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQAPGRR*RAAPEA
Trigger: AGCTTCGGGAGCAGCTCGCCAGCGCCTTCCAGGAGC...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGCCCGTGCCCCACACGTaGGCCAGGAGCCCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVPVPHT*ARSPVS
Trigger: TGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGAGATGCGCTCCGCCTaGTGGGGCCCCAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWEMRSA*WGPRRC
Trigger: ACACCTCCTGGGGCCCCATCAGGCGGAGCGCATCTC...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCTGGCGCACGGTCACCTaGAGTACCGCGTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLWRTVT*STAWER
Trigger: CCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCA...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGAATGCTCTCCCGGGCTaGGGCCACCTCGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPNALPG*GHLGWL
Trigger: GAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATT...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCCACCAGGGCTGCAATaGTCTCCCGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWPPGLQ*SPGLRP
Trigger: TGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGG...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACAGCTCCCGGCAGCGCTaGTCCAGCGCCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHSSRQR*SSASFC
Trigger: GCAGAAGCTGGCGCTGGAGCAGCGCTGCCGGGAGCT...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGCAGGGACAGGCTGCTaGGCTCTGTCGCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHAGTGC*ALSRVP
Trigger: TGGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGC...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGTCTCCTGGGTGGCGGTaGAGTCAAAGGCCACGTCGA +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQSPGWR*SQRPRR
Trigger: TCGACGTGGCCTTTGACTTCACCGCCACCCAGGAGA...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACCTCGTCCACCAGGGCTaGAATGCTCTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHLVHQG*NALPGC
Trigger: GCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAG...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCTCCACCTCGAGCTCGTaGACGCGGCACAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLSTSSS*TRHSRL
Trigger: CAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGTGGA...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGAGTGCAGGGACAGGCTaGTGCGCTCTGTCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWSAGTG*CALSRV
Trigger: CACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACT...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGCCCTCGCTCAGTGAGTaGAGGGACAGGCTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVPSLSE*RDRLLR
Trigger: GCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGG...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGCGGCCGTGGGCTCCTaGGTCCTCTGCCGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALAAVGS*VLCRFP
Trigger: GGGGAACCGGCAGAGGACCCAGGAGCCCACGGCCGC...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCTTGACCCGGCTGCGCTaGCGCACGGTCACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLLTRLR*RTVTCS
Trigger: ACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAA...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCGGCCAGTGGGCCTGGTaGCCGCGCATCGTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGGQWAW*PRIVAL
Trigger: GAGGGCGACGATGCGCGGCCACCAGGCCCACTGGCC...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGGGGTCTCAGGAGCCCTaGCCTGCTGAGATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGGSQEP*PAEILS
Trigger: GCTCAGGATCTCAGCAGGCCAGGGCTCCTGAGACCC...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCCTGCAAGATGTTCTTaGCCCGGCTGCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLPARCS*PGCAGA
Trigger: TGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGG...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCAGGCCACTTGGTCCATaGTGGTGGCCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLRPLGP*WWPAPG
Trigger: GCCTGGAGCAGGCCACCATCATGGACCAAGTGGCCT...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCCCAGTACCAGCCTTaGACACGTGGTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGPQYQP*TRGGLH
Trigger: GTGAAGGCCACCACGTGTTCAAGGCTGGTACTGGGG...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGGGAGCCCTGGCCTGCTaGGATCCTGAGCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGGALAC*DPELTS
Trigger: GGAAGTAAGCTCAGGATCTCAGCAGGCCAGGGCTCC...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCTCCTTCCTCCAGCTCTaGCACGCTGATGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLSFLQL*HADGPD
Trigger: GTCCGGCCCATCAGCGTGGCAGAGCTGGAGGAAGGA...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCAAGGCGCTGGCGAGCTaGTCCCGAAGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLKALAS*SRSCPM
Trigger: CATGGGACAGCTTCGGGAGCAGCTCGCCAGCGCCTT...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCGGCGGGACTTCTCATaGTTCCAGCCGGCGATGGTG +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWRRDFS*FQPAMV
Trigger: CACCATCGCCGGCTGGAAGCATGAGAAGTCCCGCCG...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGAGCAGCGCGTGCGACTaGATCTCGGTGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGSSACD*ISVFST
Trigger: GGTGGAGAACACCGAGATGCAGTCGCACGCGCTGCT...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGCAGGGGCTGGGTGCCTaGACACTGGCATCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPQGLGA*TLASCG
Trigger: ACCACAGGATGCCAGTGTGCAGGCACCCAGCCCCTG...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGCCTCGCCCGTGCTGCTaGACAGGTTGTCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPPRPCC*TGCPHW
Trigger: CCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGG...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGCCCAGGCTTTTCTTCTaGCCACGCAGCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVPRLFF*PRSQGL
Trigger: CAGGCCCTGGCTGCGTGGCCAGAAGAAAAGCCTGGG...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGCACACTGGCATCCTGTaGTCCGAGATGCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVHTGIL*SEMRSA
Trigger: GGCGGAGCGCATCTCGGACCACAGGATGCCAGTGTG...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCAGAGACCCCAGTTCCTaGGTCTCAGGAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLRDPSS*VSGALA
Trigger: GGCCAGGGCTCCTGAGACCCAGGAACTGGGGTCTCT...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGCCAGCTCTGCCACGCTaGTGGGCCGGACCCGAAGCG +
Preference number: 4 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLPALPR*WAGPEA
Trigger: CGCTTCGGGTCCGGCCCATCAGCGTGGCAGAGCTGG...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCTCTTGGTGGTGGCCTaGTACACCATCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGLLVVA*YTISWV
Trigger: CACCCAGGAGATGGTGTATCAGGCCACCACCAAGAG...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGTTCTGCTTGCGCAGTTaGTTCTGCTCGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PVGASPTIQDARAPHVGQFCLRS*FCSSTR
Trigger: CCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAA...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGGTGACCTTTCCCAGATaGCGGATACCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPVTFPR*RIPGAG
Trigger: CCCAGCCCCTGGTATCCGGCATCTGGGAAAGGTCAC...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGTGCCATGGGTGCTTGTaGCGTGGGGCAGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLCHGCL*RGAGGA
Trigger: GGCCCCGCCTGCCCCACGGCACAAGCACCCATGGCA...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCGGGAGGACGTCTGGTTaGCGGCCGTGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSGRTSG*RPWAPG
Trigger: CCCAGGAGCCCACGGCCGCCAACCAGACGTCCTCCC...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGGAGCGGGAGGACGTCTaGTTGGCGGCCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWEREDV*LAAVGS
Trigger: GGAGCCCACGGCCGCCAACCAGACGTCCTCCCGCTC...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGGCTGCCGAGCTGGATaGGAGGTGGGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALGCRAG*EVGWAQ
Trigger: CTGTGCCCACCCCACCTCCCATCCAGCTCGGCAGCC...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGTGTCAGGGGAAGAGTTaGTCCAGCTGCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWCQGKS*SSCPGC
Trigger: ACAGCCTGGGCAGCTGGATCAACTCTTCCCCTGACA...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACTGGCCAAAGGTAGCGTaGCCTTTCCCAGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHWPKVA*PFPDAG
Trigger: TCCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCA...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCTTGCGCAGTTGCTTCTaGTCGTCCACCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLLRSCF*SSTRAA
Trigger: TGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAA...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGCTCCTCGGAGCCGATaGGCCGCGGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRAPRSR*AAAASP
Trigger: AGGAGACGCTGCCGCGGCGCATCGGCTCCGAGGAGC...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGCTGAGCACCTCGCGCTaGTCCTCGGAGCCGATGCGC +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVRELSTSR*SSEPMR
Trigger: GCGCATCGGCTCCGAGGAGCAGCGCGAGGTGCTCAG...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCTCGCAGAGACTGCGGTaGTGCTCCAGGCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSSQRLR*CSRRRT
Trigger: CGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTGCGA...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGGCAAGGAGCTGTCCTaGAGGGCCCTGGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALGKELS*RALEAT
Trigger: AGTGGCCTCCAGGGCCCTGCAGGACAGCTCCTTGCC...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCCCTGCGTCACCAGGCTaGCGAGCTGGATGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGPASPG*RAGWEV
Trigger: CACCTCCCATCCAGCTCGGCAGCCTGGTGACGCAGG...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCACGGGGCCTCGCCCGTaGTGCTGGACAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGTGPRP*CWTGCP
Trigger: AGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGT...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGGCTGTAGTGTGGGGCTaGGCGGCCGCTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWAVVWG*AAACRP
Trigger: TGGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGC...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCATCCATCTTTGCCATaGGTGCTTGTGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLHPSLP*VLVPWG
Trigger: GCCCCACGGCACAAGCACCCATGGCAAAGATGGATG...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR CAA 72 bp CTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTaGGGAGGTGAGAGAGCCAGTTCCAGGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LHLPCPARPHSV*GGERASSRQGP
Trigger: GGGGCCCTGCCTGGAACTGGCTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCACTGCTCGCAGGACTaGTGTGAGCGATCATCACTG +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWHCSQD*CERSSL
Trigger: CAGTGATGATCGCTCACATCAGTCCTGCGAGCAGTG...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGCTCCTCCCGCCATTTaGGGGCCCGGCGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SLHLPCPARPHSVLGGERAPPAI*GPGGTS
Trigger: AGAAGTCCCGCCGGGCCCTCAAATGGCGGGAGGAGC...TCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGTCATCACCTGTGTCTaGGTCCTTCTCGCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVVITCV*VLLAVV
Trigger: GACGACAGCGAGAAGGACTCAGACACAGGTGATGAC...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTCGCGGCACAGCAGGCTaGGCACCTCGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSRGTAG*APRAAP
Trigger: AGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCG...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGTTCAGTCTTGGGAGGTaGGAGAGCCAGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWFSLGR*ESQFQA
Trigger: TGCCTGGAACTGGCTCTCTCACCTCCCAAGACTGAA...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCTGCTGAGATCCTaGGCTTACTTCCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVGLLRS*AYFLVI
Trigger: GATGACCAGGAAGTAAGCTCAGGATCTCAGCAGGCC...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGCCCAATTGTAATACGTaGAGTGCCTGTCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVPNCNT*SACRRL
Trigger: GAGGCGCCGACAGGCACTTCACGTATTACAATTGGG...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGCCCTCCTTCATACGCTaGCCACGATTCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWPSFIR*PRFCVC
Trigger: GCAGACACAGAATCGTGGGCAGCGTATGAAGGAGGG...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCCCAGCCTTCTCACCCTaGCCGCTGTGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSPAFSP*PLCSWT
Trigger: GGTCCAGCTGCACAGCGGGCAGGGTGAGAAGGCTGG...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCCCCGAAGCTGTCCCATaGCAGCCTTCTCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRYQGRGWPQGCAGFGNSPEAVP*QPSHPA
Trigger: GGCAGGGTGAGAAGGCTGGCATGGGACAGCTTCGGG...GCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACCCCAGATGCACTTGGTaGCAGTCAGGATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHPRCTW*QSGSPS
Trigger: GGAAGGAGATCCTGACTGGCACCAAGTGCATCTGGG...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGCATCCAGGATGCCCGTaGCCCACACGTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLHPGCP*PTRGPG
Trigger: TCCTGGCCCACGTGTGGGGCACGGGCATCCTGGATG...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCCCCAACCATCCAGGATaGCCGTGCCCCACACGTGGG +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSPNHPG*PCPTRG
Trigger: CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGG...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGAAAGCATGGGAGGGTTaGGCAGAGACCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPKAWEG*AETPVP
Trigger: AGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTT...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACACCCCGCTGTCCTTCATaGTTGCAGCAGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATPRCPS*LQQVEG
Trigger: CCCCTCCACCTGCTGCAATCATGAAGGACAGCGGGG...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGACTGCGAGGCGCGCTCTaGGCCAGCCAGGTCGATCAT +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRLRGAL*ASQVDH
Trigger: ATGATCGACCTGGCTGGCTCAGAGCGCGCCTCGCAG...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCCCTTCAGGAGCCGGGTaGGCTTGCTGTCGCGATAGT +
Preference number: 4 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGPSGAG*ACCRDS
Trigger: ACTATCGCGACAGCAAGCTCACCCGGCTCCTGAAGG...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGATCCAGCCGGCGATGGTaGGCAGGTGTCGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRSSRRW*AGVGRC
Trigger: ACACCTCCCGACACCTGCTCACCATCGCCGGCTGGA...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGTGGTGGAGACTTCGGTaGTGCCGGCCACCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALWWRLR*CRPPGS
Trigger: TGATCCAGGTGGCCGGCATCACCGAAGTCTCCACCA...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGAGAATCTGGGGTCAGTaGGGTTCCTGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVRIWGQ*GSCWGN
Trigger: ATTACCCCAGCAGGAACCTCACTGACCCCAGATTCT...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAAGAGCCCTTGCCCGGTaGCCTCGAAGGATCGGGACC +
Preference number: 4 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSRALAR*PRRIGT
Trigger: GGTCCCGATCCTTCGAGGTCACCGGGCAAGGGCTCT...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GTCAGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTCCAGCGCCAGCTTCTaGTTGCGCAGTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSCFPPLPRPRLASGLCRSSASF*LRSCFC
Trigger: GCAGAAGCAACTGCGCAAGCAGAAGCTGGCGCTGGA...CCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGTCCATGATGGTGGCCTaGTCCAGGCTGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVRESMMVA*SRLPSS
Trigger: GGAGGAGGGCAGCCTGGAGCAGGCCACCATCATGGA...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGATCCTGTGGTCCGAGATaGGCTCCGCCTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRSCGPR*APPDGA
Trigger: GGCCCCATCAGGCGGAGCGCATCTCGGACCACAGGA...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACACTCCATGTCATTGCTaGTCTCCTCGATGGCACGGA +
Preference number: 4 (lower is better)
Translates to: REVPVGASPTIQDARAPHTPCHC*SPRWHG
Trigger: TCCGTGCCATCGAGGAGACCAGCAATGACATGGAGT...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCCGGGAGGTGTCAATCTaGACCTCCATGGCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGREVSI*TSMARF
Trigger: GAACCGCGCCATGGAGGTCCAGATTGACACCTCCCG...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCGCCCTGGAGGCCACTTaGTCCATGATGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSALEAT*SMMVAC
Trigger: GCAGGCCACCATCATGGACCAAGTGGCCTCCAGGGC...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAAGGTGTGTCTTGGGGTaGGAGAGCCCTTGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATRCVLG*ESPCPV
Trigger: CACCGGGCAAGGGCTCTCCCACCCCAAGACACACCT...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCCCCGGGCCCGTGTTCTaGCTTGGAGGGAGTTTGACT +
Preference number: 4 (lower is better)
Translates to: LRYQGRGWPQGCAGFGNSPGPVF*LGGSLT
Trigger: AGTCAAACTCCCTCCAAGCCAGAACACGGGCCCGGG...GCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGACCCCATTCAGTCTTaGGAGGTGAGAGAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWDPIQS*EVREPV
Trigger: AACTGGCTCTCTCACCTCCCAAGACTGAATGGGGTC...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGGCTGTGCAGGTTTTaGCAACAGCATTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVGLCRF*QQHSVQ
Trigger: CTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCC...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
3UTR CAA 72 bp ACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTaGGCAACAGCATTCTGTCCAGGGCTGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TKAEAGLRAVQV*ATAFCPGLGSQ
Trigger: CTGGCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCACCAGCAGTGAGCGGTTaGTGTGGGCCCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSPAVSG*CGPPPS
Trigger: TGAAGGAGGGGGCCCACATCAACCGCTCACTGCTGG...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGGGTTGTAGTCGTCGATaGTCTGCCGCTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVREGCSRR*SAAGPG
Trigger: TCCAGGGCCAGCGGCAGATCATCGACGACTACAACC...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp TCACCCACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCGTCGCCCTCGCTCAGTaGGTGCAGGGACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPTSPIVIREVPVGASPTVALAQ*VQGQAA
Trigger: AGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGAC...GGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGCCCTGCCGCACCTCCTaGAAGATGTTCTTGACCCGG +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVREPCRTS*KMFLTR
Trigger: CCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGG...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCTGGCCCCGCCCAGTCTaGTCATCAATCTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGWPRPV*SSILRL
Trigger: CAAGCGCAAGATTGATGAGCAGACTGGGCGGGGCCA...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCGCGCCAGCTTCTGCTTaGGCAGTTGCTTCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGAPASA*AVASAR
Trigger: ACGAGCAGAAGCAACTGCGCAAGCAGAAGCTGGCGC...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGTCCTCACTGGCAGCATaGTGTAGTGTGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWSSLAA*CSVGLG
Trigger: GCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGA...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGGGCCTCGCCCGTGCTaGTGGACAGGTTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSGPRPC*WTGCPH
Trigger: GTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCC...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGCATCTTTGCCATGGGTaGTTGTGCCGTGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVREHLCHG*LCRGAG
Trigger: GCCTGCCCCACGGCACAAGCACCCATGGCAAAGATG...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGTGCTCATCCACTTTATaGGCGATGAGGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWCSSTL*AMRVAP
Trigger: AGGAGCTACCCTCATCGCCCATAAAGTGGATGAGCA...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGTCTGGTTGGCGGCCGTaGGCTCCTGGGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQSGWRP*APGSSA
Trigger: GGCAGAGGACCCAGGAGCCCACGGCCGCCAACCAGA...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCACCTCAGCTTGGATGTaGCGGATGTCACCCCGATCC +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGTSAWM*RMSPRS
Trigger: GGATCGGGGTGACATCCGCCACATCCAAGCTGAGGT...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAGCTGGACCTCAGCTTaGATGTGGCGGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGSWTSA*MWRMSP
Trigger: GGGTGACATCCGCCACATCCAAGCTGAGGTCCAGCT...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp AGCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAAACCACCACCTGGGTTaGGGGGAACAGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLHLPCPARPHSVLGGERNHHLG*GEQPGV
Trigger: CACCCCTGGCTGTTCCCCCCAACCCAGGTGGTGGTT...TCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCAGTGGCATTGTAGCCTaGGATGACGCCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGSGIVA*DDALDE
Trigger: CTCATCGAGGGCGTCATCTCAGGCTACAATGCCACT...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGCTGTCCTTCATGATTaGAGCAGGTGGAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALAVLHD*SRWRGS
Trigger: TGAGCCCCTCCACCTGCTGCAATCATGAAGGACAGC...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGATGAGAACCACCATCTaGTCATCCACTTTATGGGCG +
Preference number: 4 (lower is better)
Translates to: EVPVGASPTIQDARAPHVMRTTI*SSTLWA
Trigger: CGCCCATAAAGTGGATGAGCAGATGGTGGTTCTCAT...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATTTCTCCCGGGAGCGATaGGCCCGCAGGATGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDFSRER*ARRMSS
Trigger: CGACGACATCCTGCGGGCGCATCGCTCCCGGGAGAA...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCACCACGATTCTGTGTCTaGGAGGCGCGCTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSPRFCV*EARSEP
Trigger: TGGCTCAGAGCGCGCCTCGCAGACACAGAATCGTGG...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTTCACCCTGCCCGCTGTaGAGCTGGACCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSSPCPL*SWTSAW
Trigger: CCAAGCTGAGGTCCAGCTGCACAGCGGGCAGGGTGA...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGGCGCTGTTCTGCAGGTaGTGGGCATCAGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALALFCR*WASELN
Trigger: ATTGAGCTCTGATGCCCAGCACCTGCAGAACAGCGC...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGGGAGGGCGCTGTTCTaGAGGTGCTGGGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSGRALF*RCWASE
Trigger: CTCTGATGCCCAGCACCTGCAGAACAGCGCCCTCCC...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGCCGCTTCCTTCTCTTTaGCTCCAGCGACTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVREPLPSL*LQRLLP
Trigger: AGGGAGGAGTCGCTGGAGGCAAAGAGAAGGAAGCGG...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCACCCACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCGGGTGGGAGAGCCCTTaGCCGGTGACCTCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SPTSPIVIREVPVGASPTGWESP*PVTSKD
Trigger: ATCCTTCGAGGTCACCGGGCAAGGGCTCTCCCACCC...GGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCGGGAGCATCCATCTTTaGCATGGGTGCTTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGGSIHL*HGCLCR
Trigger: ACGGCACAAGCACCCATGGCAAAGATGGATGCTCCC...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGCCACCATGAGTTGCTaGTCCTTGGAGTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRATMSC*SLESPL
Trigger: CAGCGGGGACTCCAAGGACCAGCAACTCATGGTGGC...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATACCTGCAGTACCGCGTaGGAGCGGGAGGACGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDTCSTA*EREDVW
Trigger: CCAGACGTCCTCCCGCTCCCACGCGGTACTGCAGGT...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGATGCCCGCTGTGCAGCTaGACCTCAGCTTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRCPLCS*TSAWMW
Trigger: CCACATCCAAGCTGAGGTCCAGCTGCACAGCGGGCA...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCAGCATGCTGTAGTGTaGGGCTGGGCGGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQQHAVV*GWAAAC
Trigger: GCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCGCCCGTGTTCTGGCTTaGAGGGAGTTTGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGARVLA*REFDFG
Trigger: GCCAAAGTCAAACTCCCTCCAAGCCAGAACACGGGC...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTTGTCGCTCAGGGCGTTaGTGCAGTTGCCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSCRSGR*CSCPVP
Trigger: TGGCACTGGGCAACTGCATCAACGCCCTGAGCGACA...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCCCGCAGGTCAGCGATaGTGCTGGTGTACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQPAGQR*CWCTGR
Trigger: TCGCCCAGTACACCAGCATCATCGCTGACCTGCGGG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCACATCAATCTTGCGCTTaGGTCGCTGGATCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSHQSCA*VAGSRP
Trigger: GGGGCGAGATCCAGCGACTCAAGCGCAAGATTGATG...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp AGCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGATTTCCCCAGTGGCACTaGAAGCATGGGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SLHLPCPARPHSVLGGERFPQWH*KHGRVG
Trigger: CCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAA...TCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGGGTCTGAACATAGATaGCAGGCTCCTGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATGSEHR*QAPGLC
Trigger: GCACAGACCAGGAGCCTGGCATCTATGTTCAGACCC...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCTCCGCACATCCATCTaGTCCTGGAAGGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQLRTSI*SWKALA
Trigger: CGCCAGCGCCTTCCAGGAGCAGATGGATGTGCGGAG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATTCGCGGAGCAGCGCGTaGGACTGCATCTCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDSRSSA*DCISVF
Trigger: GAACACCGAGATGCAGTCGCACGCGCTGCTCCGCGA...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACACTGGCCTCAGGGCTGTaGAGGTTTTGGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATLASGL*RFWQQH
Trigger: ATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAG...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGCCTTGAACACGTGGTaGCCTTCACTCTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLALNTW*PSLSVL
Trigger: CAGCACAGAGAGTGAAGGCCACCACGTGTTCAAGGC...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCCAGCCTTGAACACGTaGTGGCCTTCACTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWPALNT*WPSLSV
Trigger: CACAGAGAGTGAAGGCCACCACGTGTTCAAGGCTGG...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCCAGGAGGTGTGTCTTaGGGTGGGAGAGCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQPGGVS*GGRALA
Trigger: GGCAAGGGCTCTCCCACCCCAAGACACACCTCCTGG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATCCGGATACCAGGGGCTaGGTGCCTGCACACTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDPDTRG*VPAHWH
Trigger: ATGCCAGTGTGCAGGCACCCAGCCCCTGGTATCCGG...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGCCTGAGCTTACTTCCTaGTCATCTCCATCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALPELTS*SSPSAQ
Trigger: CTGGGCAGATGGAGATGACCAGGAAGTAAGCTCAGG...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATTACCAAGGCCGAGGCTaGCCTCAGGGCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDYQGRG*PQGCAG
Trigger: ACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTA...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCCCGAAGCGCCACCATaGGTTGCTGGTCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQPEAPP*VAGPWS
Trigger: ACTCCAAGGACCAGCAACTCATGGTGGCGCTTCGGG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGAGCGATCATCACTGTaGGGCTGTTTCCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRERSSL*GCFLPE
Trigger: CTCTGGGAGGAAACAGCCGCACAGTGATGATCGCTC...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCCCCTTCATCAGCAGCTaGATGATCTCCTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: LRYQGRGWPQGCAGFGNSPFISS*MISLAL
Trigger: CAATGCCAAGGAGATCATGCAGCTGCTGATGAAGGG...GCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGAGGAGCTTTTTGCCTaGCAGGCCCCAGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDEELFA*QAPVPA
Trigger: GGCTGGTACTGGGGCCTGGCAGGCAAAAAGCTCCTC...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAAGGGCCCCTCAGTTATaGCGGGAGCATCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSRAPQL*REHPSL
Trigger: CAAAGATGGATGCTCCCGGCATAACTGAGGGGCCCT...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGTGATGCCGGCCACCTaGATCACCCCCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDVMPAT*ITPLES
Trigger: GGACTCTAAGGGGGTGATCCAGGTGGCCGGCATCAC...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGCTGTTCTGCAGGTGCTaGGCATCAGAGCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLLFCRC*ASELNV
Trigger: GACATTGAGCTCTGATGCCCAGCACCTGCAGAACAG...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCACCCACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCTGGGTGCCTGCACACTaGCATCCTGTGGTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SPTSPIVIREVPVGASPTWVPAH*HPVVRD
Trigger: ATCTCGGACCACAGGATGCCAGTGTGCAGGCACCCA...GGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGTGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGACCTCCATTGGGTCCATaGGAACCACCATCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRPPLGP*EPPSAH
Trigger: ATGAGCAGATGGTGGTTCTCATGGACCCAATGGAGG...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATCACAGAGGAGCTTTTTaGCTGCCAGGCCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDHRGAF*LPGPST
Trigger: GGTACTGGGGCCTGGCAGGCAAAAAGCTCCTCTGTG...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCGGCCTTCACCCAGATaGACTTGGTGCCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQRPSPR*TWCQSG
Trigger: TCCTGACTGGCACCAAGTGCATCTGGGTGAAGGCCG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATCAATCTGGACCTCCATaGCGCGGTTCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDQSGPP*RGSPAP
Trigger: TGGAGCTGGAGAACCGCGCCATGGAGGTCCAGATTG...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGTCCAGGATGTCTGGTTaGTCATCACCTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWSRMSG*SSPVSE
Trigger: CTCAGACACAGGTGATGACCAACCAGACATCCTGGA...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp GCCTCCACCTCCCATGCCCTGCTAGACCCCATTCAGTCTTGGGAGGTGAGAGAGTGCTGTCGCGATAGTTaGTGTACTTGTTGCTACCCT +
Preference number: 4 (lower is better)
Translates to: ASTSHALLDPIQSWEVRECCRDS*CTCCYP
Trigger: AGGGTAGCAACAAGTACATCAACTATCGCGACAGCA...CTCTCTCACCTCCCAAGACTGAATGGGGTCTAGCAGGGCATGGGAGGTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCGGGATCCTCCATTaGGTCCATGAGAACCACCAT +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSVGILH*VHENHH
Trigger: ATGGTGGTTCTCATGGACCCAATGGAGGATCCCGAC...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCTCTCCAGGTAGGACATaGAGACCTCATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSSPGRT*RPHTPC
Trigger: ACATGGAGTATGAGGTCTCCATGTCCTACCTGGAGA...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGTCGATGATCTGCCGCTaGCCCTGGATAATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQSMICR*PWIISS
Trigger: CGACGAGATTATCCAGGGCCAGCGGCAGATCATCGA...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTTCACCCAGATGCACTTaGTGCCAGTCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSSPRCT*CQSGSP
Trigger: AGGAGATCCTGACTGGCACCAAGTGCATCTGGGTGA...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR TCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATCACGGAAGAGGTCGTTaGGGGTCTGAACATAGATGC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDHGRGR*GSEHRC
Trigger: GCATCTATGTTCAGACCCTCAACGACCTCTTCCGTG...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp TCACCCACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCCATACTCCATGTCATTaGTGGTCTCCTCGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SPTSPIVIREVPVGASPTHTPCH*WSPRWH
Trigger: GTGCCATCGAGGAGACCAGCAATGACATGGAGTATG...GGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGCGTCTCACTGTCAGCTaGTTTCCTCCGTTACCAAGG +
Preference number: 4 (lower is better)
Translates to: TSPIVIREVPVGASPTIQRLTVS*FPPLPR
Trigger: CCTTGGTAACGGAGGAAAGCAGCTGACAGTGAGACG...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CCA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATTGGCTCCAGGATGTCTaGTTGGTCATCACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SPIVIREVPVGASPTIQDWLQDV*LVITCV
Trigger: GACACAGGTGATGACCAACCAGACATCCTGGAGCCA...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR GCA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAACGTTCAGGAGGTTCTaGTTCACCCTAGTCTTAATG +
Preference number: 4 (lower is better)
Translates to: LASPLFPSGTESMGGLGRTFRRF*FTLVLM
Trigger: CATTAAGACTAGGGTGAAGCAGAACCTCCTGAACGT...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 90 bp TCGTCGCAGAGACTGCGGTGCTGCTCCAGGCGGCGCACGGCCTCGTaGCGGTGGCGGAGCGCACCGTCGCGGAGCAGCGCGTGCGACTGC +
Preference number: 5 (lower is better)
Translates to: SSQRLRCCSRRRTAS*RWRSAPSRSSACDC
Trigger: GCAGTCGCACGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTGCGACGA
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS CCA 90 bp CAGAGACTGCGGTGCTGCTCCAGGCGGCGCACGGCCTCGTGGCGGTaGCGGAGCGCACCGTCGCGGAGCAGCGCGTGCGACTGCATCTCG +
Preference number: 5 (lower is better)
Translates to: QRLRCCSRRRTASWR*RSAPSRSSACDCIS
Trigger: CGAGATGCAGTCGCACGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp ACCTCGAGCTCGTGCACGCGGCACAGCAGGCTGAGCACCTCGCGCTaGTCCTCGGAGCCGATGCGCCGCGGCAGCGTCTCCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: TSSSCTRHSRLSTSR*SSEPMRRGSVSSRR
Trigger: GCGCCTGGAGGAGACGCTGCCGCGGCGCATCGGCTCCGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGT
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp AGCCGCACCCCCACCGCCTCCGGGTCGCGTCCGCCAGCTGCTAGCTaGCCGCCGCCTCGCGCGCTGCCTGACAACCCGAAACCAACAACG +
Preference number: 5 (lower is better)
Translates to: SRTPTASGSRPPAAS*PPPRALPDNPKPTT
Trigger: CGTTGTTGGTTTCGGGTTGTCAGGCAGCGCGCGAGGCGGCGGGCAGCTAGCAGCTGGCGGACGCGACCCGGAGGCGGTGGGGGTGCGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551294.5
CDS GCA 90 bp ACGGCCTCGTGGCGGTGGCGGAGCGCACCGTCGCGGAGCAGCGCGTaGGACTGCATCTCGGTGTTCTCCACCTCGAGCTCGTGCACGCGG +
Preference number: 5 (lower is better)
Translates to: TASWRWRSAPSRSSA*DCISVFSTSSSCTR
Trigger: CCGCGTGCACGAGCTCGAGGTGGAGAACACCGAGATGCAGTCGCACGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCACGAGGCCGT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS TCA 90 bp TCTCGGTGTTCTCCACCTCGAGCTCGTGCACGCGGCACAGCAGGCTaGGCACCTCGCGCTGCTCCTCGGAGCCGATGCGCCGCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SRCSPPRARARGTAG*APRAAPRSRCAAAA
Trigger: CGCTGCCGCGGCGCATCGGCTCCGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGTGGAGAACACCGAGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp TCGTGGCGGTGGCGGAGCGCACCGTCGCGGAGCAGCGCGTGCGACTaGATCTCGGTGTTCTCCACCTCGAGCTCGTGCACGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: SWRWRSAPSRSSACD*ISVFSTSSSCTRHS
Trigger: GCTGTGCCGCGTGCACGAGCTCGAGGTGGAGAACACCGAGATGCAGTCGCACGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCACGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp ATCTGCCGCTGGCCCTGGATAATCTCGTCGCAGAGACTGCGGTGCTaGTCCAGGCGGCGCACGGCCTCGTGGCGGTGGCGGAGCGCACCG +
Preference number: 5 (lower is better)
Translates to: ICRWPWIISSQRLRC*SRRRTASWRWRSAP
Trigger: CGGTGCGCTCCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTGCGACGAGATTATCCAGGGCCAGCGGCAGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp GCCGCGCATCGTCGCCCTCGCTCAGTGAGTGCAGGGACAGGCTGCTaGGCTCTGTCGCGGGTGCCAGCAGGTGTCGCCCCTCGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: AAHRRPRSVSAGTGC*ALSRVPAGVAPRFP
Trigger: TGGGAACCGAGGGGCGACACCTGCTGGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACGATGCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp GTGGCCGCGCATCGTCGCCCTCGCTCAGTGAGTGCAGGGACAGGCTaGTGCGCTCTGTCGCGGGTGCCAGCAGGTGTCGCCCCTCGGTTC +
Preference number: 5 (lower is better)
Translates to: VAAHRRPRSVSAGTG*CALSRVPAGVAPRF
Trigger: GAACCGAGGGGCGACACCTGCTGGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACGATGCGCGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp GGGGCCTCGCCCGTGCTGCTGGACAGGTTGTCCTCACTGGCAGCATaGTGTAGTGTGGGGCTGGGCGGCCGCTTGCAGGCCAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GASPVLLDRLSSLAA*CSVGLGGRLQASGP
Trigger: AGGCCCACTGGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 90 bp CGGCCCTGCCGCACCTCCTGCAAGATGTTCTTGACCCGGCTGCGCTaGCGCACGGTCACCTGCAGTACCGCGTGGGAGCGGGAGGACGTC +
Preference number: 5 (lower is better)
Translates to: RPCRTSCKMFLTRLR*RTVTCSTAWEREDV
Trigger: GACGTCCTCCCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CCA 90 bp CCGTGCTGCTGGACAGGTTGTCCTCACTGGCAGCATGCTGTAGTGTaGGGCTGGGCGGCCGCTTGCAGGCCAGTGGGCCTGGTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: PCCWTGCPHWQHAVV*GWAAACRPVGLVAA
Trigger: CGCGGCCACCAGGCCCACTGGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp ATGATCTGCCGCTGGCCCTGGATAATCTCGTCGCAGAGACTGCGGTaGTGCTCCAGGCGGCGCACGGCCTCGTGGCGGTGGCGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: MICRWPWIISSQRLR*CSRRRTASWRWRSA
Trigger: TGCGCTCCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTGCGACGAGATTATCCAGGGCCAGCGGCAGATCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp TCCTGCAAGATGTTCTTGACCCGGCTGCGCTGGCGCACGGTCACCTaGAGTACCGCGTGGGAGCGGGAGGACGTCTGGTTGGCGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SCKMFLTRLRWRTVT*STAWEREDVWLAAV
Trigger: CACGGCCGCCAACCAGACGTCCTCCCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 90 bp AGCAGCGCGTGCGACTGCATCTCGGTGTTCTCCACCTCGAGCTCGTaGACGCGGCACAGCAGGCTGAGCACCTCGCGCTGCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SSACDCISVFSTSSS*TRHSRLSTSRCSSE
Trigger: CTCCGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGTGGAGAACACCGAGATGCAGTCGCACGCGCTGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 90 bp GGCCGTCCCCATGATGTCCGACTGCCCGGGACGGGGCCTCGCCCGTaGTGCTGGACAGGTTGTCCTCACTGGCAGCATGCTGTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRPHDVRLPGTGPRP*CWTGCPHWQHAVVW
Trigger: CCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGCAGTCGGACATCATGGGGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 90 bp TTGCTGGTCCTTGGAGTCCCCGCTGTCCTTCATGATTGCAGCAGGTaGAGGGGCTCAGGCCGCGCCACCGGGCATGGCTCAGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: LLVLGVPAVLHDCSR*RGSGRATGHGSAAP
Trigger: GGGTGCGGCTGAGCCATGCCCGGTGGCGCGGCCTGAGCCCCTCCACCTGCTGCAATCATGAAGGACAGCGGGGACTCCAAGGACCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551017.1
ENST00000551294.5
CDS-3UTR CAA 90 bp TCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGGGCTGGGCGGCCGCTaGCAGGCCAGTGGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SSVTKAEAGLRAVQVLATGLGGR*QASGPG
Trigger: ACCAGGCCCACTGGCCTGCAAGCGGCCGCCCAGCCC...TGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCCAGTCCGCTTCCTTCTCTTaGCCTCCAGCGACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PVGASPTIQDARAPHVGQSASFS*PPATPP
Trigger: GGGAGGAGTCGCTGGAGGCAAAGAGAAGGAAGCGGA...CTGGCCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp GAGCCAGCCAGGTCGATCATGAACAGGCGGCCCTGCCGCACCTCCTaGAAGATGTTCTTGACCCGGCTGCGCTGGCGCACGGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: EPARSIMNRRPCRTS*KMFLTRLRWRTVTC
Trigger: GCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGTTCATGATCGACCTGGCTGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 90 bp CGCCAGCTTCTGCTTGCGCAGTTGCTTCTGCTCGTCCACCAGGGCTaGAATGCTCTCCCGGGCTGCGGCCACCTCGGGTGGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RQLLLAQLLLLVHQG*NALPGCGHLGWLQD
Trigger: ATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGCTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS CCA 90 bp TGCTTCCAGCCGGCGATGGTGAGCAGGTGTCGGGAGGTGTCAATCTaGACCTCCATGGCGCGGTTCTCCAGCTCCAGCAGGCGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: CFQPAMVSRCREVSI*TSMARFSSSSRRLR
Trigger: GCGGAGGCGCCTGCTGGAGCTGGAGAACCGCGCCATGGAGGTCCAGATTGACACCTCCCGACACCTGCTCACCATCGCCGGCTGGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS-3UTR CAA 90 bp AGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGCTGTCAGGGGAAGAGTaGATCCAGCTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SACRRLPNHPGCPCPTRGLSGEE*IQLPRL
Trigger: CAGCCTGGGCAGCTGGATCAACTCTTCCCCTGACAG...CCCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp GTCAGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGCTTTGCCATGGGTGCTaGTGCCGTGGGGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: VSCFPPLPRPRLASGLCRLCHGC*CRGAGG
Trigger: CCCGCCTGCCCCACGGCACAAGCACCCATGGCAAAG...CCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp CCTTCTGCTTGCGCAGTTGCTTCTGCTCGTCCACCAGGGCTGCAATaGTCTCCCGGGCTGCGGCCACCTCGGGTGGCTCCAGGATGTCTG +
Preference number: 5 (lower is better)
Translates to: PSACAVASARPPGLQ*SPGLRPPRVAPGCL
Trigger: CAGACATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359939.10
ENST00000547389.1
CDS GCA 90 bp GGACACCTTCTGCTTGCGCAGTTGCTTCTGCTCGTCCACCAGGGCTaGAATGCTCTCCCGGGCTGCGGCCACCTCGGGTGGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GHLLLAQLLLLVHQG*NALPGCGHLGWLQD
Trigger: ATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359939.10
ENST00000547389.1
CDS GCA 90 bp GCTTCTGCTTGCGCAGTTGCTTCTGCTCGTCCACCAGGGCTGCAATaGTCTCCCGGGCTGCGGCCACCTCGGGTGGCTCCAGGATGTCTG +
Preference number: 5 (lower is better)
Translates to: ASACAVASARPPGLQ*SPGLRPPRVAPGCL
Trigger: CAGACATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS CCA 90 bp CAGTTATGCCGGGAGCATCCATCTTTGCCATGGGTGCTTGTGCCGTaGGGCAGGCGGGGCCCACGGGTAGCCCGTCGAGAACCACCACCT +
Preference number: 5 (lower is better)
Translates to: QLCREHPSLPWVLVP*GRRGPRVARREPPP
Trigger: AGGTGGTGGTTCTCGACGGGCTACCCGTGGGCCCCGCCTGCCCCACGGCACAAGCACCCATGGCAAAGATGGATGCTCCCGGCATAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACCAGCTGGACCTCAGCTaGGATGTGGCGGATGTCACC +
Preference number: 5 (lower is better)
Translates to: REVPVGASPTIQDARAPHQLDLS*DVADVT
Trigger: GGTGACATCCGCCACATCCAAGCTGAGGTCCAGCTG...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGGCCCCAGTACCAGCCTaGAACACGTGGTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPAPVPA*NTWWPS
Trigger: TGAAGGCCACCACGTGTTCAAGGCTGGTACTGGGGC...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGGCACAGAGGAGCTTTTaGCCTGCCAGGCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPAQRSF*PARPQY
Trigger: GTACTGGGGCCTGGCAGGCAAAAAGCTCCTCTGTGC...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCCGCGGGAGCATCCATCTTaGCCATGGGTGCTTGTGCCG +
Preference number: 5 (lower is better)
Translates to: RAPHVGQEPRLTVSCFPPREHPS*PWVLVP
Trigger: CGGCACAAGCACCCATGGCAAAGATGGATGCTCCCG...CGGAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGAAAGCATGGGAGGGTaGGGCAGAGACCCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWESMGG*GRDPSS
Trigger: GGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp CTGGCGAGCTGCTCCCGAAGCTGTCCCATGCCAGCCTTCTCACCCTaGCCGCTGTGCAGCTGGACCTCAGCTTGGATGTGGCGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LASCSRSCPMPAFSP*PLCSWTSAWMWRMS
Trigger: TGACATCCGCCACATCCAAGCTGAGGTCCAGCTGCACAGCGGGCAGGGTGAGAAGGCTGGCATGGGACAGCTTCGGGAGCAGCTCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000549637.1
ENST00000551294.5
CDS GCA 90 bp CAGTTGCTTCTGCTCGTCCACCAGGGCTGCAATGCTCTCCCGGGCTaGGGCCACCTCGGGTGGCTCCAGGATGTCTGGTTGGTCATCACC +
Preference number: 5 (lower is better)
Translates to: QLLLLVHQGCNALPG*GHLGWLQDVWLVIT
Trigger: GGTGATGACCAACCAGACATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 90 bp GAGGTTCTGCTTCACCTGCAGGGAACACGTATGGAGCGGAGGGGATaGAGTCACCCCAGGTGCACTCACCGAGGCCTGCCTGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: EVLLHLQGTRMERRG*SHPRCTHRGLPAGP
Trigger: AGGCCCTGCAGGCAGGCCTCGGTGAGTGCACCTGGGGTGACTGCATCCCCTCCGCTCCATACGTGTTCCCTGCAGGTGAAGCAGAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS-3UTR CAA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTCGGGAGGACGTCTGGTaGGCGGCCGTGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSREDVW*AAVGSW
Trigger: CCAGGAGCCCACGGCCGCCAACCAGACGTCCTCCCG...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp GGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGGGAAGCGGGGTGGGAGAGCCCTaGCCCGGTGACCTCGAAGGA +
Preference number: 5 (lower is better)
Translates to: GLRAVQVLATAFCPGLGSGVGEP*PGDLEG
Trigger: TCCTTCGAGGTCACCGGGCAAGGGCTCTCCCACCCC...GCTTCCCAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp GAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAGGAGCCCTGCCCAGGAGGTGTGTCTaGGGGTGGGAGAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: ESMGGLGRDPSSWVSGALPRRCV*GWESPC
Trigger: GCAAGGGCTCTCCCACCCCAAGACACACCTCCTGGG...CAGGGCTCCTGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTCCTGCAAGATGTTCTaGACCCGGCTGCGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: PRLASGLCRFWQQHSVQGSCKMF*TRLRWR
Trigger: GCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGA...GCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp AAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGTTCACCCAGATGCACTaGGTGCCAGTCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: KCLSAPPQPSRMPVPHTWFTQMH*VPVRIS
Trigger: GGAGATCCTGACTGGCACCAAGTGCATCTGGGTGAA...CCACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp GAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACGTGGGAGGGAGTTTGACTTaGGCCAAAGGTAGCGTGACC +
Preference number: 5 (lower is better)
Translates to: EVPVGASPTIQDARAPHVGGSLT*AKGSVT
Trigger: GGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCC...CACGTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp TCTTGGGAGGTGAGAGAGCCAGTTCCAGGCAGGGCCCCTCAGTTATaGCGGGAGCATCCATCTTTGCCATGGGTGCTTGTGCCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SWEVREPVPGRAPQL*REHPSLPWVLVPWG
Trigger: GCCCCACGGCACAAGCACCCATGGCAAAGATGGATGCTCCCGGCATAACTGAGGGGCCCTGCCTGGAACTGGCTCTCTCACCTCCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp CCAGGTGCACTCACCGAGGCCTGCCTGCAGGGCCTTTCTTCCCCCTaGCTCCCCCAGTCTTTCTGGGTGACAGTAATGGCCTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PGALTEACLQGLSSP*LPQSFWVTVMASFP
Trigger: AGGAAAGGAGGCCATTACTGTCACCCAGAAAGACTGGGGGAGGCAGGGGGAAGAAAGGCCCTGCAGGCAGGCCTCGGTGAGTGCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS-3UTR CAA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCTTGTCGCTCAGGGCGTaGATGCAGTTGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGLSLRA*MQLPSA
Trigger: GGCACTGGGCAACTGCATCAACGCCCTGAGCGACAA...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACTACTTGTTGCTACCCTaGTCGCTCAGGGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: REVPVGASPTIQDARAPHYLLLP*SLRALM
Trigger: CATCAACGCCCTGAGCGACAAGGGTAGCAACAAGTA...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CCCGTGCCCCACACGTGGGCCAGGAGCCCCGTCTCACTGTCAGCTGCTTTCCTCATCTCCTTCCTCTCTTaGTGGGACAAGGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: PVPHTWARSPVSLSAAFLISFLS*WDKGIS
Trigger: GGAGATCCCCTTGTCCCACAAAGAGAGGAAGGAGAT...GAGGAAAGCAGCTGACAGTGAGACGGGGCTCCTGGCCCACGTGTGGGGCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp CTCATCCACTTTATGGGCGATGAGGGTAGCTCCTTCCTCCAGCTCTaGCACGCTGATGGGCCGGACCCGAAGCGCCACCATGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LIHFMGDEGSSFLQL*HADGPDPKRHHELL
Trigger: CAGCAACTCATGGTGGCGCTTCGGGTCCGGCCCATCAGCGTGGCAGAGCTGGAGGAAGGAGCTACCCTCATCGCCCATAAAGTGGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551017.1
ENST00000551294.5
CDS-3UTR CAA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGAAGCGCCACCATGAGTaGCTGGTCCTTGGAGTCCCC +
Preference number: 5 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWKRHHE*LVLGVP
Trigger: GGGGACTCCAAGGACCAGCAACTCATGGTGGCGCTT...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp CGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATGCCCGTGCCCCACACTCATACTCCATGTCATaGCTGGTCTCCTCGATGGCA +
Preference number: 5 (lower is better)
Translates to: REVPVGASPTIQDARAPHSYSMS*LVSSMA
Trigger: TGCCATCGAGGAGACCAGCAATGACATGGAGTATGA...GTGTGGGGCACGGGCATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp TCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGATTGCTCCTCCCGCCATTaGAGGGCCCGGCGGGACTTC +
Preference number: 5 (lower is better)
Translates to: SPIVIREVPVGASPTIQDCSSRH*RARRDF
Trigger: GAAGTCCCGCCGGGCCCTCAAATGGCGGGAGGAGCA...ATCCTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGAGCGCCAGCTTCTGCTaGCGCAGTTGCTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWSASFC*RSCFCS
Trigger: CGAGCAGAAGCAACTGCGCAAGCAGAAGCTGGCGCT...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp GGAGGGAGTTTGACTTTGGCCAAAGGTAGCGTGACCTTTCCCAGATaGCGGATACCAGGGGCTGGGTGCCTGCACACTGGCATCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GGSLTLAKGSVTFPR*RIPGAGCLHTGILW
Trigger: CCACAGGATGCCAGTGTGCAGGCACCCAGCCCCTGGTATCCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp AGCAGACCTCTGCCCTGCAGCTCCTGCTGCAGAGCCCTGCATACCTaGTCATCCACTTTATGGGCGATGAGGGTAGCTCCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRPLPCSSCCRALHT*SSTLWAMRVAPSSS
Trigger: GCTGGAGGAAGGAGCTACCCTCATCGCCCATAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCAGGAGCTGCAGGGCAGAGGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS GCA 90 bp GGTGAGCTGAGCCATCTGAGCAGACCTCTGCCCTGCAGCTCCTGCTaGAGAGCCCTGCATACCTGCTCATCCACTTTATGGGCGATGAGG +
Preference number: 5 (lower is better)
Translates to: GELSHLSRPLPCSSC*RALHTCSSTLWAMR
Trigger: CCTCATCGCCCATAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCAGGAGCTGCAGGGCAGAGGTCTGCTCAGATGGCTCAGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS GCA 90 bp CCAGGTGAGCTGAGCCATCTGAGCAGACCTCTGCCCTGCAGCTCCTaGTGCAGAGCCCTGCATACCTGCTCATCCACTTTATGGGCGATG +
Preference number: 5 (lower is better)
Translates to: PGELSHLSRPLPCSS*CRALHTCSSTLWAM
Trigger: CATCGCCCATAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCAGGAGCTGCAGGGCAGAGGTCTGCTCAGATGGCTCAGCTCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS GCA 90 bp CTGCCCTCACCAGGTGAGCTGAGCCATCTGAGCAGACCTCTGCCCTaGAGCTCCTGCTGCAGAGCCCTGCATACCTGCTCATCCACTTTA +
Preference number: 5 (lower is better)
Translates to: LPSPGELSHLSRPLP*SSCCRALHTCSSTL
Trigger: TAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCAGGAGCTGCAGGGCAGAGGTCTGCTCAGATGGCTCAGCTCACCTGGTGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS CCA 90 bp CTCCCGGGAGCGATGCGCCCGCAGGATGTCGTCGGGATCCTCCATTaGGTCCATGAGAACCACCATCTGCTCATCCACTTTATGGGCGAT +
Preference number: 5 (lower is better)
Translates to: LPGAMRPQDVVGILH*VHENHHLLIHFMGD
Trigger: ATCGCCCATAAAGTGGATGAGCAGATGGTGGTTCTCATGGACCCAATGGAGGATCCCGACGACATCCTGCGGGCGCATCGCTCCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS-3UTR CAA 90 bp GCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCTCATCAATCTTGCGCTaGAGTCGCTGGATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: AFLRYQGRGWPQGCAGFGSSILR*SRWISP
Trigger: GGGCGAGATCCAGCGACTCAAGCGCAAGATTGATGA...GCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp TGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCTTCTGCTTGCGCAGTaGCTTCTGCTCGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: CFPPLPRPRLASGLCRFWLLLAQ*LLLVHQ
Trigger: CTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAG...CCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 90 bp TGCAGCTCCTGCTGCAGAGCCCTGCATACCTGCTCATCCACTTTATaGGCGATGAGGGTAGCTCCTTCCTCCAGCTCTGCCACGCTGATG +
Preference number: 5 (lower is better)
Translates to: CSSCCRALHTCSSTL*AMRVAPSSSSATLM
Trigger: CATCAGCGTGGCAGAGCTGGAGGAAGGAGCTACCCTCATCGCCCATAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCAGGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS-3UTR CAA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTAGGGCGTTGATGCAGTaGCCCAGTGCCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSRALMQ*PSASSE
Trigger: CTCACTGCTGGCACTGGGCAACTGCATCAACGCCCT...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp GTCAGCTGCTTTCCTCCGTTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGAGCTGCATGATCTCCTaGGCATTGATGGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: VSCFPPLPRPRLASGLCRSCMIS*ALMVET
Trigger: AGTCTCCACCATCAATGCCAAGGAGATCATGCAGCT...CCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAACGGAGGAAAGCAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 90 bp CACCTCGGGTGGCTCCAGGATGTCTGGTTGGTCATCACCTGTGTCTaGGTCCTTCTCGCTGTCGTCCTTAGCGTAGCACTCCTTTCGCTG +
Preference number: 5 (lower is better)
Translates to: HLGWLQDVWLVITCV*VLLAVVLSVALLSL
Trigger: CAGCGAAAGGAGTGCTACGCTAAGGACGACAGCGAGAAGGACTCAGACACAGGTGATGACCAACCAGACATCCTGGAGCCACCCGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 90 bp TTGCCCGGTGACCTCGAAGGATCGGGACCTCCGCTTCCTTCTCTTTaGCTCCAGCGACTCCTCCCTTTTCTTGCCCAGGCTTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPGDLEGSGPPLPSL*LQRLLPFLAQAFLL
Trigger: CAGAAGAAAAGCCTGGGCAAGAAAAGGGAGGAGTCGCTGGAGGCAAAGAGAAGGAAGCGGAGGTCCCGATCCTTCGAGGTCACCGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp AAGGGCCACCCCCATCTCTCTGATTTTCTCTGGGCTCACCGCTCCTaGATGAACATCCCACTCCAGTTGAAGACCTGTCCTGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: KGHPHLSDFLWAHRS*MNIPLQLKTCPALP
Trigger: GGGGAGAGCAGGACAGGTCTTCAACTGGAGTGGGATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATCAGAGAGATGGGGGTGGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS-3UTR CAA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGGTGCTGCTGGACAGGTaGTCCTCACTGGCAGCATGC +
Preference number: 5 (lower is better)
Translates to: TSPIVIREVPVGASPTIQVLLDR*SSLAAC
Trigger: GCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCAC...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 90 bp GTCCTCATTCCTCCACCCGTTGTTGAAGGGCCACCCCCATCTCTCTaGTTTTCTCTGGGCTCACCGCTCCTGCATGAACATCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: VLIPPPVVEGPPPSL*FSLGSPLLHEHPTP
Trigger: TGGAGTGGGATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATCAGAGAGATGGGGGTGGCCCTTCAACAACGGGTGGAGGAATGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS CCA 90 bp CTCCACCCGTTGTTGAAGGGCCACCCCCATCTCTCTGATTTTCTCTaGGCTCACCGCTCCTGCATGAACATCCCACTCCAGTTGAAGACC +
Preference number: 5 (lower is better)
Translates to: LHPLLKGHPHLSDFL*AHRSCMNIPLQLKT
Trigger: GGTCTTCAACTGGAGTGGGATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATCAGAGAGATGGGGGTGGCCCTTCAACAACGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS-3UTR CAA 90 bp GAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCCAGGGCTGATGATCTCCTTGGCATaGATGGTGGAGACTTCGGTG +
Preference number: 5 (lower is better)
Translates to: EAGLRAVQVLATAFCPGLMISLA*MVETSV
Trigger: CACCGAAGTCTCCACCATCAATGCCAAGGAGATCAT...CAGCCCTGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp AGTGGCACTGAAAGCATGGGAGGGTTGGGCAGAGACCCCAGTTCCTGGGTCTCAAGGGCTGTGCAGGTTTaGGCAACAGCATTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SGTESMGGLGRDPSSWVSRAVQV*ATAFCP
Trigger: TGGACAGAATGCTGTTGCCAAAACCTGCACAGCCCT...TGAGACCCAGGAACTGGGGTCTCTGCCCAACCCTCCCATGCTTTCAGTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS-3UTR CAA 90 bp TTACCAAGGCCGAGGCTGGCCTCAGGGCTGTGCAGGTTTTGGCAACAGCATTCTGTCTGCTCATCAATCTaGCGCTTGAGTCGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LPRPRLASGLCRFWQQHSVCSSI*RLSRWI
Trigger: GATCCAGCGACTCAAGCGCAAGATTGATGAGCAGAC...AGAATGCTGTTGCCAAAACCTGCACAGCCCTGAGGCCAGCCTCGGCCTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 90 bp TGGGCAGCAGGCATATTAGGGTGGGAAAGTCAAGCAATGAGCATGTaGAAGGTAAAGGATCAGGGCCCACCCAGGCTAGGGAAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: WAAGILGWESQAMSM*KVKDQGPPRLGKLP
Trigger: TGGGAGCTTCCCTAGCCTGGGTGGGCCCTGATCCTTTACCTTTCACATGCTCATTGCTTGACTTTCCCACCCTAATATGCCTGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS-3UTR CAA 90 bp ACATCCCCAATTGTAATACGTGAAGTGCCTGTCGGCGCCTCCCCAACCATCCAGTGGCTTGGAGGGAGTTaGACTTTGGCCAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: TSPIVIREVPVGASPTIQWLGGS*TLAKGS
Trigger: GCTACCTTTGGCCAAAGTCAAACTCCCTCCAAGCCA...CTGGATGGTTGGGGAGGCGCCGACAGGCACTTCACGTATTACAATTGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 90 bp CTGTTCACCACAGTTTCCCAGTTTCTAGAACAGTACCCAGCATGCTaGTGGTACTTGATACACACTTATTGCCTCGTGTGCCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LFTTVSQFLEQYPAC*WYLIHTYCLVCPAF
Trigger: GAAGGCAGGGCACACGAGGCAATAAGTGTGTATCAAGTACCAGCAGCATGCTGGGTACTGTTCTAGAAACTGGGAAACTGTGGTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS CCA 90 bp TTCACCACAGTTTCCCAGTTTCTAGAACAGTACCCAGCATGCTGCTaGTACTTGATACACACTTATTGCCTCGTGTGCCCTGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FTTVSQFLEQYPACC*YLIHTYCLVCPAFL
Trigger: GAGGAAGGCAGGGCACACGAGGCAATAAGTGTGTATCAAGTACCAGCAGCATGCTGGGTACTGTTCTAGAAACTGGGAAACTGTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS-3UTR CAA 90 bp CTGGCCTCACCTCTTTTCCCCAGTGGCACTGAAAGCATGGGAGGGTTGGGCAGACCAAATGGGATTTTATaGTTAAAAAGGAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LASPLFPSGTESMGGLGRPNGIL*LKRKGE
Trigger: CTCACCCTTCCTTTTTAACAATAAAATCCCATTTGG...TCTGCCCAACCCTCCCATGCTTTCAGTGCCACTGGGGAAAAGAGGTGAGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 90 bp CCAGCACCTACCATTGGCATCATTTACCTGCTATTAGGAATATTCTaGACCATCAATGAGCTGTTTCAAGAATGTGTCTCCCGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PAPTIGIIYLLLGIF*TINELFQECVSRPP
Trigger: TGGGGGACGGGAGACACATTCTTGAAACAGCTCATTGATGGTTCAGAATATTCCTAATAGCAGGTAAATGATGCCAATGGTAGGTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS TCA 90 bp AAGCATTTCTTTGAAGCCCTTGTTAGCTGCAAACTCGTTTGTTTGTaGTGCAATTCTTTGATGAATGCCTCATCTCTTCACACTAGACTT +
Preference number: 5 (lower is better)
Translates to: KHFFEALVSCKLVCL*CNSLMNASSLHTRL
Trigger: AAGTCTAGTGTGAAGAGATGAGGCATTCATCAAAGAATTGCATCACAAACAAACGAGTTTGCAGCTAACAAGGGCTTCAAAGAAATGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS CCA 72 bp AGACTGCGGTGCTGCTCCAGGCGGCGCACGGCCTCGTaGCGGTGGCGGAGCGCACCGTCGCGGAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: RLRCCSRRRTAS*RWRSAPSRSSA
Trigger: CGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCT
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp CCCACCGCCTCCGGGTCGCGTCCGCCAGCTGCTAGCTaGCCGCCGCCTCGCGCGCTGCCTGACAACCCGAAA +
Preference number: 6 (lower is better)
Translates to: PTASGSRPPAAS*PPPRALPDNPK
Trigger: TTTCGGGTTGTCAGGCAGCGCGCGAGGCGGCGGGCAGCTAGCAGCTGGCGGACGCGACCCGGAGGCGGTGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551294.5
CDS CCA 72 bp CGGCTGCGCTGGCGCACGGTCACCTGCAGTACCGCGTaGGAGCGGGAGGACGTCTGGTTGGCGGCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: RLRWRTVTCSTA*EREDVWLAAVG
Trigger: GCCCACGGCCGCCAACCAGACGTCCTCCCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp TCGTGCACGCGGCACAGCAGGCTGAGCACCTCGCGCTaGTCCTCGGAGCCGATGCGCCGCGGCAGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: SCTRHSRLSTSR*SSEPMRRGSVS
Trigger: GGAGACGCTGCCGCGGCGCATCGGCTCCGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGA
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS TCA 72 bp TGGGCCTGGTGGCCGCGCATCGTCGCCCTCGCTCAGTaGGTGCAGGGACAGGCTGCTGCGCTCTGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: WAWWPRIVALAQ*VQGQAAALCRG
Trigger: CCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACGATGCGCGGCCACCAGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CCTGGTGGCCGCGCATCGTCGCCCTCGCTCAGTGAGTaGAGGGACAGGCTGCTGCGCTCTGTCGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: PGGRASSPSLSE*RDRLLRSVAGA
Trigger: GGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACGATGCGCGGCCACCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 90 bp TGTCCGACTGCCCGGGACGGGGCCTCGCCCGTGCTGCTGGACAGGTaGTCCTCACTGGCAGCATGCTGTAGTGTGGGGCTGGGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: CPTARDGASPVLLDR*SSLAACCSVGLGGR
Trigger: GCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGCAGTCGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 72 bp TCTCCACCTCGAGCTCGTGCACGCGGCACAGCAGGCTaGGCACCTCGCGCTGCTCCTCGGAGCCGATGCGCC +
Preference number: 6 (lower is better)
Translates to: SPPRARARGTAG*APRAAPRSRCA
Trigger: GGCGCATCGGCTCCGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGTGGAGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp TGGCGGTGGCGGAGCGCACCGTCGCGGAGCAGCGCGTaGGACTGCATCTCGGTGTTCTCCACCTCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: WRWRSAPSRSSA*DCISVFSTSSS
Trigger: CGAGCTCGAGGTGGAGAACACCGAGATGCAGTCGCACGCGCTGCTCCGCGACGGTGCGCTCCGCCACCGCCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp TGGCCCTGGATAATCTCGTCGCAGAGACTGCGGTGCTaGTCCAGGCGGCGCACGGCCTCGTGGCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: WPWIISSQRLRC*SRRRTASWRWR
Trigger: CCGCCACCGCCACGAGGCCGTGCGCCGCCTGGAGCAGCACCGCAGTCTCTGCGACGAGATTATCCAGGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp CGTCGCCCTCGCTCAGTGAGTGCAGGGACAGGCTGCTaGGCTCTGTCGCGGGTGCCAGCAGGTGTCGCCCCT +
Preference number: 6 (lower is better)
Translates to: RRPRSVSAGTGC*ALSRVPAGVAP
Trigger: AGGGGCGACACCTGCTGGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CATCGTCGCCCTCGCTCAGTGAGTGCAGGGACAGGCTaGTGCGCTCTGTCGCGGGTGCCAGCAGGTGTCGCC +
Preference number: 6 (lower is better)
Translates to: HRRPRSVSAGTG*CALSRVPAGVA
Trigger: GGCGACACCTGCTGGCACCCGCGACAGAGCGCAGCAGCCTGTCCCTGCACTCACTGAGCGAGGGCGACGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp GGTTGTCCTCACTGGCAGCATGCTGTAGTGTGGGGCTaGGCGGCCGCTTGCAGGCCAGTGGGCCTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GCPHWQHAVVWG*AAACRPVGLVA
Trigger: GGCCACCAGGCCCACTGGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp TGCCCAGGCTTTTCTTCTGGCCACGCAGCCAGGGCCTaGGGCCGTCCCCATGATGTCCGACTGCCCGGGACG +
Preference number: 6 (lower is better)
Translates to: CPGFSSGHAARA*GRPHDVRLPGT
Trigger: CGTCCCGGGCAGTCGGACATCATGGGGACGGCCCCAGGCCCTGGCTGCGTGGCCAGAAGAAAAGCCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 72 bp GCCCGGGACGGGGCCTCGCCCGTGCTGCTGGACAGGTaGTCCTCACTGGCAGCATGCTGTAGTGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: ARDGASPVLLDR*SSLAACCSVGL
Trigger: CAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp GGAAGGCGCTGGCGAGCTGCTCCCGAAGCTGTCCCATaGCAGCCTTCTCACCCTGCCCGCTGTGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRRWRAAPEAVP*QPSHPARCAAG
Trigger: TCCAGCTGCACAGCGGGCAGGGTGAGAAGGCTGGCATGGGACAGCTTCGGGAGCAGCTCGCCAGCGCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000549637.1
ENST00000551294.5
CDS GCA 72 bp CTGCTCGTCCACCAGGGCTGCAATGCTCTCCCGGGCTaGGGCCACCTCGGGTGGCTCCAGGATGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LLVHQGCNALPG*GHLGWLQDVWL
Trigger: CAACCAGACATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp TGCGCAGTTGCTTCTGCTCGTCCACCAGGGCTGCAATaGTCTCCCGGGCTGCGGCCACCTCGGGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: CAVASARPPGLQ*SPGLRPPRVAP
Trigger: TGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp CCCGTGCTGCTGGACAGGTTGTCCTCACTGGCAGCATaGTGTAGTGTGGGGCTGGGCGGCCGCTTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PVLLDRLSSLAA*CSVGLGGRLQA
Trigger: GGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp CGCACCTCCTGCAAGATGTTCTTGACCCGGCTGCGCTaGCGCACGGTCACCTGCAGTACCGCGTGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: RTSCKMFLTRLR*RTVTCSTAWER
Trigger: CCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CCA 72 bp GTCCGACTGCCCGGGACGGGGCCTCGCCCGTGCTGCTaGACAGGTTGTCCTCACTGGCAGCATGCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: VRLPGTGPRPCC*TGCPHWQHAVV
Trigger: CACTACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGCAGTCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp CGGGAGCATCCATCTTTGCCATGGGTGCTTGTGCCGTaGGGCAGGCGGGGCCCACGGGTAGCCCGTCGAGAA +
Preference number: 6 (lower is better)
Translates to: REHPSLPWVLVP*GRRGPRVARRE
Trigger: TTCTCGACGGGCTACCCGTGGGCCCCGCCTGCCCCACGGCACAAGCACCCATGGCAAAGATGGATGCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS TCA 72 bp ACAGGCGGCCCTGCCGCACCTCCTGCAAGATGTTCTTaGCCCGGCTGCGCTGGCGCACGGTCACCTGCAGTA +
Preference number: 6 (lower is better)
Translates to: TGGPAAPPARCS*PGCAGARSPAV
Trigger: TACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp ATGTTCTTGACCCGGCTGCGCTGGCGCACGGTCACCTaGAGTACCGCGTGGGAGCGGGAGGACGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: MFLTRLRWRTVT*STAWEREDVWL
Trigger: CAACCAGACGTCCTCCCGCTCCCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp TGCGACTGCATCTCGGTGTTCTCCACCTCGAGCTCGTaGACGCGGCACAGCAGGCTGAGCACCTCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: CDCISVFSTSSS*TRHSRLSTSRC
Trigger: GCAGCGCGAGGTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTCGAGGTGGAGAACACCGAGATGCAGTCGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp GATGTCCGACTGCCCGGGACGGGGCCTCGCCCGTGCTaGTGGACAGGTTGTCCTCACTGGCAGCATGCTGTA +
Preference number: 6 (lower is better)
Translates to: DVRLPGTGPRPC*WTGCPHWQHAV
Trigger: TACAGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGCAGTCGGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CATGATGTCCGACTGCCCGGGACGGGGCCTCGCCCGTaGTGCTGGACAGGTTGTCCTCACTGGCAGCATGCT +
Preference number: 6 (lower is better)
Translates to: HDVRLPGTGPRP*CWTGCPHWQHA
Trigger: AGCATGCTGCCAGTGAGGACAACCTGTCCAGCAGCACGGGCGAGGCCCCGTCCCGGGCAGTCGGACATCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CTGGGTGCCTGCACACTGGCATCCTGTGGTCCGAGATaGGCTCCGCCTGATGGGGCCCCAGGAGGTGTGTCT +
Preference number: 6 (lower is better)
Translates to: LGACTLASCGPR*APPDGAPGGVS
Trigger: AGACACACCTCCTGGGGCCCCATCAGGCGGAGCGCATCTCGGACCACAGGATGCCAGTGTGCAGGCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp CTTGGAGTCCCCGCTGTCCTTCATGATTGCAGCAGGTaGAGGGGCTCAGGCCGCGCCACCGGGCATGGCTCA +
Preference number: 6 (lower is better)
Translates to: LGVPAVLHDCSR*RGSGRATGHGS
Trigger: TGAGCCATGCCCGGTGGCGCGGCCTGAGCCCCTCCACCTGCTGCAATCATGAAGGACAGCGGGGACTCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551017.1
ENST00000551294.5
CDS CCA 72 bp TGGACAGGTTGTCCTCACTGGCAGCATGCTGTAGTGTaGGGCTGGGCGGCCGCTTGCAGGCCAGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: WTGCPHWQHAVV*GWAAACRPVGL
Trigger: CAGGCCCACTGGCCTGCAAGCGGCCGCCCAGCCCCACACTACAGCATGCTGCCAGTGAGGACAACCTGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 72 bp AACAGGCGGCCCTGCCGCACCTCCTGCAAGATGTTCTaGACCCGGCTGCGCTGGCGCACGGTCACCTGCAGT +
Preference number: 6 (lower is better)
Translates to: NRRPCRTSCKMF*TRLRWRTVTCS
Trigger: ACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CAA 90 bp TCGATCATGAACAGGCGGCCCTGCCGCACCTCCTGCAAGATGTTCTaGACCCGGCTGCGCTGGCGCACGGTCACCTGCAGTACCGCGTGG +
Preference number: 6 (lower is better)
Translates to: SIMNRRPCRTSCKMF*TRLRWRTVTCSTAW
Trigger: CCACGCGGTACTGCAGGTGACCGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGTTCATGATCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp GACGTCTGGTTGGCGGCCGTGGGCTCCTGGGTCCTCTaGCGGTTCCCCTTCATCAGCAGCTGCATGATCTCC +
Preference number: 6 (lower is better)
Translates to: DVWLAAVGSWVL*RFPFISSCMIS
Trigger: GGAGATCATGCAGCTGCTGATGAAGGGGAACCGGCAGAGGACCCAGGAGCCCACGGCCGCCAACCAGACGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp AGGTCGATCATGAACAGGCGGCCCTGCCGCACCTCCTaGAAGATGTTCTTGACCCGGCTGCGCTGGCGCACG +
Preference number: 6 (lower is better)
Translates to: RSIMNRRPCRTS*KMFLTRLRWRT
Trigger: CGTGCGCCAGCGCAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGTTCATGATCGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp CCTTTCCCAGATGCCGGATACCAGGGGCTGGGTGCCTaGACACTGGCATCCTGTGGTCCGAGATGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: PFPDAGYQGLGA*TLASCGPRCAP
Trigger: CGGAGCGCATCTCGGACCACAGGATGCCAGTGTGCAGGCACCCAGCCCCTGGTATCCGGCATCTGGGAAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp CCGGCGATGGTGAGCAGGTGTCGGGAGGTGTCAATCTaGACCTCCATGGCGCGGTTCTCCAGCTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PAMVSRCREVSI*TSMARFSSSSR
Trigger: CCTGCTGGAGCTGGAGAACCGCGCCATGGAGGTCCAGATTGACACCTCCCGACACCTGCTCACCATCGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CCA 72 bp GGCTGCAATGCTCTCCCGGGCTGCGGCCACCTCGGGTaGCTCCAGGATGTCTGGTTGGTCATCACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GCNALPGCGHLG*LQDVWLVITCV
Trigger: GACACAGGTGATGACCAACCAGACATCCTGGAGCCACCCGAGGTGGCCGCAGCCCGGGAGAGCATTGCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CCA 72 bp GCGAGCGCCGCCGGGCGGCCTTCACCCAGATGCACTTaGTGCCAGTCAGGATCTCCTTCCTCTCTTTGTGGG +
Preference number: 6 (lower is better)
Translates to: ASAAGRPSPRCT*CQSGSPSSLCG
Trigger: CCCACAAAGAGAGGAAGGAGATCCTGACTGGCACCAAGTGCATCTGGGTGAAGGCCGCCCGGCGGCGCTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp CAGATGCCGGATACCAGGGGCTGGGTGCCTGCACACTaGCATCCTGTGGTCCGAGATGCGCTCCGCCTGATG +
Preference number: 6 (lower is better)
Translates to: QMPDTRGWVPAH*HPVVRDALRLM
Trigger: CATCAGGCGGAGCGCATCTCGGACCACAGGATGCCAGTGTGCAGGCACCCAGCCCCTGGTATCCGGCATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 72 bp GCCTGGCCCCGCCCAGTCTGCTCATCAATCTTGCGCTaGAGTCGCTGGATCTCGCCCCGCAGGTCAGCGATG +
Preference number: 6 (lower is better)
Translates to: AWPRPVCSSILR*SRWISPRRSAM
Trigger: CATCGCTGACCTGCGGGGCGAGATCCAGCGACTCAAGCGCAAGATTGATGAGCAGACTGGGCGGGGCCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000549637.1
ENST00000551294.5
CDS CAA 72 bp CGCGAGCGCCGCCGGGCGGCCTTCACCCAGATGCACTaGGTGCCAGTCAGGATCTCCTTCCTCTCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: RERRRAAFTQMH*VPVRISFLSLW
Trigger: CCACAAAGAGAGGAAGGAGATCCTGACTGGCACCAAGTGCATCTGGGTGAAGGCCGCCCGGCGGCGCTCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp TGCTCCAGCGCCAGCTTCTGCTTGCGCAGTTGCTTCTaGTCGTCCACCAGGGCTGCAATGCTCTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: CSSASFCLRSCF*SSTRAAMLSRA
Trigger: AGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGCTGGCGCTGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000551294.5
CDS GCA 72 bp ACACGTATGGAGCGGAGGGGATGCAGTCACCCCAGGTaGACTCACCGAGGCCTGCCTGCAGGGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: TRMERRGCSHPR*THRGLPAGPFF
Trigger: GAAGAAAGGCCCTGCAGGCAGGCCTCGGTGAGTGCACCTGGGGTGACTGCATCCCCTCCGCTCCATACGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS GCA 72 bp CTTCACCTGCAGGGAACACGTATGGAGCGGAGGGGATaGAGTCACCCCAGGTGCACTCACCGAGGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LHLQGTRMERRG*SHPRCTHRGLP
Trigger: AGGCAGGCCTCGGTGAGTGCACCTGGGGTGACTGCATCCCCTCCGCTCCATACGTGTTCCCTGCAGGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS GCA 72 bp TTTATGGGCGATGAGGGTAGCTCCTTCCTCCAGCTCTaGCACGCTGATGGGCCGGACCCGAAGCGCCACCAT +
Preference number: 6 (lower is better)
Translates to: FMGDEGSSFLQL*HADGPDPKRHH
Trigger: ATGGTGGCGCTTCGGGTCCGGCCCATCAGCGTGGCAGAGCTGGAGGAAGGAGCTACCCTCATCGCCCATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551017.1
ENST00000551294.5
CDS GCA 72 bp TCTGAGCCAGCCAGGTCGATCATGAACAGGCGGCCCTaGCGCACCTCCTGCAAGATGTTCTTGACCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SEPARSIMNRRP*RTSCKMFLTRL
Trigger: CAGCCGGGTCAAGAACATCTTGCAGGAGGTGCGGCAGGGCCGCCTGTTCATGATCGACCTGGCTGGCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp AGCGCCGCCGGGCGGCCTTCACCCAGATGCACTTGGTaGCAGTCAGGATCTCCTTCCTCTCTTTGTGGGACA +
Preference number: 6 (lower is better)
Translates to: SAAGRPSPRCTW*QSGSPSSLCGT
Trigger: TGTCCCACAAAGAGAGGAAGGAGATCCTGACTGGCACCAAGTGCATCTGGGTGAAGGCCGCCCGGCGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp GCATTGATGGTGGAGACTTCGGTGATGCCGGCCACCTaGATCACCCCCTTAGAGTCCTCCCGCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALMVETSVMPAT*ITPLESSRSSR
Trigger: CCTGGAGCTGCGGGAGGACTCTAAGGGGGTGATCCAGGTGGCCGGCATCACCGAAGTCTCCACCATCAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389916.5
ENST00000547389.1
CDS CAA 90 bp TCGCTCAGGGCGTTGATGCAGTTGCCCAGTGCCAGCAGTGAGCGGTaGATGTGGGCCCCCTCCTTCATACGCTGCCCACGATTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: SLRALMQLPSASSER*MWAPSFIRCPRFCV
Trigger: GACACAGAATCGTGGGCAGCGTATGAAGGAGGGGGCCCACATCAACCGCTCACTGCTGGCACTGGGCAACTGCATCAACGCCCTGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CAA 90 bp GAGGAGTCCCCCGGGCCCGTGTTCTGGCTTGGAGGGAGTTTGACTTaGGCCAAAGGTAGCGTGACCTTTCCCAGATGCCGGATACCAGGG +
Preference number: 6 (lower is better)
Translates to: EESPGPVFWLGGSLT*AKGSVTFPRCRIPG
Trigger: CCCTGGTATCCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCCAAGCCAGAACACGGGCCCGGGGGACTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CAAACCCTGGACACCTTCTGCTTGCGCAGTTGCTTCTaGTCGTCCACCAGGGCTGCAATGCTCTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: QTLDTFCLRSCF*SSTRAAMLSRA
Trigger: AGCCCGGGAGAGCATTGCAGCCCTGGTGGACGAGCAGAAGCAACTGCGCAAGCAGAAGGTGTCCAGGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359939.10
ENST00000547389.1
CDS CCA 72 bp GTGCTGAGGGGAGGGAGGGCGCTGTTCTGCAGGTGCTaGGCATCAGAGCTCAATGTCTTCACACTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VLRGGRALFCRC*ASELNVFTLSR
Trigger: CCTGGAGAGTGTGAAGACATTGAGCTCTGATGCCCAGCACCTGCAGAACAGCGCCCTCCCTCCCCTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 72 bp CCCGGGCCCGTGTTCTGGCTTGGAGGGAGTTTGACTTaGGCCAAAGGTAGCGTGACCTTTCCCAGATGCCGG +
Preference number: 6 (lower is better)
Translates to: PGPVFWLGGSLT*AKGSVTFPRCR
Trigger: CCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCCAAGCCAGAACACGGGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 90 bp AGGGGTGAGGAGTCCCCCGGGCCCGTGTTCTGGCTTGGAGGGAGTTaGACTTTGGCCAAAGGTAGCGTGACCTTTCCCAGATGCCGGATA +
Preference number: 6 (lower is better)
Translates to: RGEESPGPVFWLGGS*TLAKGSVTFPRCRI
Trigger: TATCCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCCAAGCCAGAACACGGGCCCGGGGGACTCCTCACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp TTGACTTTGGCCAAAGGTAGCGTGACCTTTCCCAGATaGCGGATACCAGGGGCTGGGTGCCTGCACACTGGC +
Preference number: 6 (lower is better)
Translates to: LTLAKGSVTFPR*RIPGAGCLHTG
Trigger: GCCAGTGTGCAGGCACCCAGCCCCTGGTATCCGGCATCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS GCA 72 bp CCACAGACGCCATCCCCTTCCTGCCTTTGGAACCTGTaGTCTCCCTGCTCCCACCTTTCTGGAATGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PQTPSPSCLWNL*SPCSHLSGMSS
Trigger: GGAGGACATTCCAGAAAGGTGGGAGCAGGGAGAGCACAGGTTCCAAAGGCAGGAAGGGGATGGCGTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS CAA 72 bp GAGGAGCTTTTTGCCTGCCAGGCCCCAGTACCAGCCTaGAACACGTGGTGGCCTTCACTCTCTGTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: EELFACQAPVPA*NTWWPSLSVLR
Trigger: CCTCAGCACAGAGAGTGAAGGCCACCACGTGTTCAAGGCTGGTACTGGGGCCTGGCAGGCAAAAAGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CAA 72 bp GAGTCCCCCGGGCCCGTGTTCTGGCTTGGAGGGAGTTaGACTTTGGCCAAAGGTAGCGTGACCTTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: ESPGPVFWLGGS*TLAKGSVTFPR
Trigger: TCTGGGAAAGGTCACGCTACCTTTGGCCAAAGTCAAACTCCCTCCAAGCCAGAACACGGGCCCGGGGGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389916.5
CDS CCA 72 bp GCGATGCGCCCGCAGGATGTCGTCGGGATCCTCCATTaGGTCCATGAGAACCACCATCTGCTCATCCACTTT +
Preference number: 6 (lower is better)
Translates to: AMRPQDVVGILH*VHENHHLLIHF
Trigger: AAAGTGGATGAGCAGATGGTGGTTCTCATGGACCCAATGGAGGATCCCGACGACATCCTGCGGGCGCATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS CCA 72 bp TGCTGCAGAGCCCTGCATACCTGCTCATCCACTTTATaGGCGATGAGGGTAGCTCCTTCCTCCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: CCRALHTCSSTL*AMRVAPSSSSA
Trigger: GGCAGAGCTGGAGGAAGGAGCTACCCTCATCGCCCATAAAGTGGATGAGCAGGTATGCAGGGCTCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS CAA 90 bp GATTTTCTCTGGGCTCACCGCTCCTGCATGAACATCCCACTCCAGTaGAAGACCTGTCCTGCTCTCCCCATACCCACCACAGACGCCATC +
Preference number: 6 (lower is better)
Translates to: DFLWAHRSCMNIPLQ*KTCPALPIPTTDAI
Trigger: GATGGCGTCTGTGGTGGGTATGGGGAGAGCAGGACAGGTCTTCAACTGGAGTGGGATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS TCA 72 bp CCCGCAGGATGTCGTCGGGATCCTCCATTGGGTCCATaGGAACCACCATCTGCTCATCCACTTTATGGGCGA +
Preference number: 6 (lower is better)
Translates to: PAGCRRDPPLGP*EPPSAHPLYGR
Trigger: TCGCCCATAAAGTGGATGAGCAGATGGTGGTTCTCATGGACCCAATGGAGGATCCCGACGACATCCTGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS TCA 72 bp CATTGCTGGTCTCCTCGATGGCACGGAAGAGGTCGTTaGGGGTCTGAACATAGATGCCAGGCTCCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: HCWSPRWHGRGR*GSEHRCQAPGL
Trigger: CAGACCAGGAGCCTGGCATCTATGTTCAGACCCTCAACGACCTCTTCCGTGCCATCGAGGAGACCAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS TCA 72 bp CCTCCACCCGTTGTTGAAGGGCCACCCCCATCTCTCTaGTTTTCTCTGGGCTCACCGCTCCTGCATGAACAT +
Preference number: 6 (lower is better)
Translates to: PPPVVEGPPPSL*FSLGSPLLHEH
Trigger: ATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATCAGAGAGATGGGGGTGGCCCTTCAACAACGGGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS CCA 72 bp GGGTCCATGAGAACCACCATCTGCTCATCCACTTTATaGGCGATGAGGGTAGCTCCTTCCTCCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GSMRTTICSSTL*AMRVAPSSSSA
Trigger: GGCAGAGCTGGAGGAAGGAGCTACCCTCATCGCCCATAAAGTGGATGAGCAGATGGTGGTTCTCATGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS TCA 72 bp TGGCTCCAGGATGTCTGGTTGGTCATCACCTGTGTCTaGGTCCTTCTCGCTGTCGTCCTTAGCGTAGCACTC +
Preference number: 6 (lower is better)
Translates to: WLQDVWLVITCV*VLLAVVLSVAL
Trigger: GAGTGCTACGCTAAGGACGACAGCGAGAAGGACTCAGACACAGGTGATGACCAACCAGACATCCTGGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359939.10
ENST00000389916.5
ENST00000547389.1
ENST00000551294.5
CDS GCA 72 bp CCCCATCTCTCTGATTTTCTCTGGGCTCACCGCTCCTaGATGAACATCCCACTCCAGTTGAAGACCTGTCCT +
Preference number: 6 (lower is better)
Translates to: PHLSDFLWAHRS*MNIPLQLKTCP
Trigger: AGGACAGGTCTTCAACTGGAGTGGGATGTTCATGCAGGAGCGGTGAGCCCAGAGAAAATCAGAGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549637.1
CDS TCA 72 bp TGCCTCGTGTGCCCTGCCTTCCTCATCCTGGTGACATaGGGACCAAGATTGCAAACAGAGAGCGAGGATTTT +
Preference number: 6 (lower is better)
Translates to: CLVCPAFLILVT*GPRLQTESEDF
Trigger: AAAATCCTCGCTCTCTGTTTGCAATCTTGGTCCTCATGTCACCAGGATGAGGAAGGCAGGGCACACGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS GCA 72 bp CTGGTACTTGATACACACTTATTGCCTCGTGTGCCCTaGCTTCCTCATCCTGGTGACATGAGGACCAAGATT +
Preference number: 6 (lower is better)
Translates to: LVLDTHLLPRVP*LPHPGDMRTKI
Trigger: AATCTTGGTCCTCATGTCACCAGGATGAGGAAGGCAGGGCACACGAGGCAATAAGTGTGTATCAAGTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS GCA 72 bp ACAGTTTCCCAGTTTCTAGAACAGTACCCAGCATGCTaGTGGTACTTGATACACACTTATTGCCTCGTGTGC +
Preference number: 6 (lower is better)
Translates to: TVSQFLEQYPAC*WYLIHTYCLVC
Trigger: GCACACGAGGCAATAAGTGTGTATCAAGTACCAGCAGCATGCTGGGTACTGTTCTAGAAACTGGGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS CAA 72 bp CCTACTCTCATGCCACTAAGCATTTCTTTGAAGCCCTaGTTAGCTGCAAACTCGTTTGTTTGTGATGCAATT +
Preference number: 6 (lower is better)
Translates to: PTLMPLSISLKP*LAANSFVCDAI
Trigger: AATTGCATCACAAACAAACGAGTTTGCAGCTAACAAGGGCTTCAAAGAAATGCTTAGTGGCATGAGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS TCA 72 bp TTTGAAGCCCTTGTTAGCTGCAAACTCGTTTGTTTGTaGTGCAATTCTTTGATGAATGCCTCATCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: FEALVSCKLVCL*CNSLMNASSLH
Trigger: GTGAAGAGATGAGGCATTCATCAAAGAATTGCATCACAAACAAACGAGTTTGCAGCTAACAAGGGCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551017.1
CDS TCA 72 bp ACCATTGGCATCATTTACCTGCTATTAGGAATATTCTaGACCATCAATGAGCTGTTTCAAGAATGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: TIGIIYLLLGIF*TINELFQECVS
Trigger: GGAGACACATTCTTGAAACAGCTCATTGATGGTTCAGAATATTCCTAATAGCAGGTAAATGATGCCAATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549637.1