RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF18B (Homo sapiens)

Ensembl gene IDs: ENSG00000186185

Ensembl transcript IDs: ENST00000585687.1, ENST00000587309.5, ENST00000590129.1, ENST00000593135.6

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCATTCCTCCGGTTGCTAGGGCACAGGGGACTCAAGGGCAGCTCTaGAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: SIPPVARAQGTQGQL*RPVGWVAGSAARKE
Trigger: TTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAGCTGCCCTTGAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR TCA 90 bp AGGACATTCTGGCGGTCAGGACACCTTGGTGACGCCGTTCCCTGCTaGGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCG +
Preference number: 1 (lower is better)
Translates to: RTFWRSGHLGDAVPC*ECSPHPDEVLSIPP
Trigger: CGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCCAGAATGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CCA 90 bp TCTACTGCCTGTGGCCATCACCGTGGGGCCTGTGTTAGAGACAGGTaGGGAAAAGAGCCCAAGAGCCGTCTGCCTGCACAGAGGGCATCA +
Preference number: 1 (lower is better)
Translates to: STACGHHRGACVRDR*GKEPKSRLPAQRAS
Trigger: TGATGCCCTCTGTGCAGGCAGACGGCTCTTGGGCTCTTTTCCCCACCTGTCTCTAACACAGGCCCCACGGTGATGGCCACAGGCAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR GCA 90 bp GTCTGGGGAGGGATGTTAATACAGCAAAGGTGTGTTGGCACTAATTaGTCCCAGGTAAGGAAGGCAGGTCCAGCTCCTGGTGCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: VWGGMLIQQRCVGTN*SQVRKAGPAPGAGG
Trigger: GCCACCTGCACCAGGAGCTGGACCTGCCTTCCTTACCTGGGAGCAATTAGTGCCAACACACCTTTGCTGTATTAACATCCCTCCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CCA 90 bp AAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTaGGGACCAAGGGGAGTAGGGATGAAGATGTCCCTCTCAGAAACC +
Preference number: 1 (lower is better)
Translates to: KSRHHYHPHLHQDCG*GPRGVGMKMSLSET
Trigger: GGTTTCTGAGAGGGACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CCA 90 bp TTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTaGTTGGGGACCAAGGGGAGTAGGGATGAAGATGTCCCTCTCAGA +
Preference number: 1 (lower is better)
Translates to: LEIKAPLSSTSSPGL*LGTKGSRDEDVPLR
Trigger: TCTGAGAGGGACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR TCA 90 bp GGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTaGACGTGTATCCTATGTACAATAGAGTTAAGCAATAAAGCTGTC +
Preference number: 1 (lower is better)
Translates to: GAALSLNSPLHFILH*TCILCTIELSNKAV
Trigger: GACAGCTTTATTGCTTAACTCTATTGTACATAGGATACACGTTCAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CCA 90 bp TGTATCCTATGTACAATAGAGTTAAGCAATAAAGCTGTCTTCATTTaGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGT +
Preference number: 1 (lower is better)
Translates to: CILCTIELSNKAVFI*KSRHHYHPHLHQDC
Trigger: ACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGCTTTATTGCTTAACTCTATTGTACATAGGATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTGCAGGCCAGTTGGATaGGTGGCGGGGAGTGCAGCG +
Preference number: 2 (lower is better)
Translates to: PAESALPTLMRSFPFLRLCRPVG*VAGSAA
Trigger: CGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR CCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGCTTCATCGGCCTCCATaGCCCAGGCTATCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRLHRPP*PRLSLS
Trigger: GGACAGGGATAGCCTGGGCCATGGAGGCCGATGAAG...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCGCTCTGCAGGCCAGTTaGATGGGTGGCGGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: MGEHGSTFKTATRARRGSALQAS*MGGGEC
Trigger: GCACTCCCCGCCACCCATCCAACTGGCCTGCAGAGC...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CAA 90 bp GTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGACACCTaGGTGACGCCGTTCCCTGCTGAGAGTGCTCTCCCCACCCTGATG +
Preference number: 2 (lower is better)
Translates to: VRTPWWSGHSGGQDT*VTPFPAESALPTLM
Trigger: CATCAGGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGGCCAGTTGGATGGGTaGCGGGGAGTGCAGCGAGGA +
Preference number: 2 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRGQLDG*RGVQRG
Trigger: TCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR TCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGAGGCGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 2 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGERRRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCGCCT...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR TCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGAGGCGGGTGGATCATaGGGTCAGATCGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVEAGGS*GQIETS
Trigger: GCTGGTCTCGATCTGACCTCATGATCCACCCGCCTC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTAC +
Preference number: 2 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRPGGGG*SEPRSY
Trigger: GTACGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCTGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCCA +
Preference number: 2 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDLGGGA*SEPRSP
Trigger: TGGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCAG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAAGCCCAAGAGCCGTCTaGCTGCACAGAGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSPRAV*LHRGHH
Trigger: ATGATGCCCTCTGTGCAGGCAGACGGCTCTTGGGCT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACAGGCGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 2 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRRRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCGCCT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGGCAGGAGAATTACTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDGRRIT*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGTAATTCTCCTGCC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTGTGTTGGCACTAATTaGTCCCAGGTAAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGECVGTN*SQVRKA
Trigger: TGCCTTCCTTACCTGGGAGCAATTAGTGCCAACACA...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCATCAGCAGCATCCCTaGGATGCTTGGCAATACCCT +
Preference number: 2 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDHQQHP*DAWQYP
Trigger: AGGGTATTGCCAAGCATCTCAGGGATGCTGCTGATG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR TCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGTCAGGACACCTTGGTaGCGCCGTTCCCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDVRTPW*RRSLLR
Trigger: TCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGAC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR TCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGAGATTAACAGAGGGTaGGTAGCAGGATGGATGTCT +
Preference number: 2 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSREINRG*VAGWMS
Trigger: AGACATCCATCCTGCTACTCACCCTCTGTTAATCTC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTGTGTTGGCACTAATTaGTCCCAGGTAAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRCVGTN*SQVRKA
Trigger: TGCCTTCCTTACCTGGGAGCAATTAGTGCCAACACA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACAAGAGCCGTCTGCCTaGACAGAGGGCATCATAAAT +
Preference number: 2 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVQEPSA*TEGIIN
Trigger: ATTTATGATGCCCTCTGTGCAGGCAGACGGCTCTTG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACAGCTCCTGGTGCAGGTaGCTACAGGTCCAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSSWCR*LQVQEG
Trigger: CCCCTCTTGGACCTGTAGCCACCTGCACCAGGAGCT...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CAA 90 bp GAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTaGGGGACCAAGGGGAGTAGGGATGAAGATGTCCCTCTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: EIKAPLSSTSSPGLW*GTKGSRDEDVPLRN
Trigger: GTTTCTGAGAGGGACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTCATTCCTCCTCTACTaGCTGTGGCCATCACCGTGG +
Preference number: 2 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSFLLY*LWPSPW
Trigger: CCACGGTGATGGCCACAGGCAGTAGAGGAGGAATGA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAAGATCGCCACCACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQDRHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGTGGCGATCTTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAAGAGCCGTCTGCCTaGACAGAGGGCATCATAAAT +
Preference number: 2 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQEPSA*TEGIIN
Trigger: ATTTATGATGCCCTCTGTGCAGGCAGACGGCTCTTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR CCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGAGCAGGATGGATGTCTaGGGAGGGATGTTAATACAG +
Preference number: 2 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLSRMDV*GGMLIQ
Trigger: CTGTATTAACATCCCTCCCCAGACATCCATCCTGCT...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR TCA 72 bp GGTGGTCAGGACATTCTGGCGGTCAGGACACCTTGGTaGCGCCGTTCCCTGCTGAGAGTGCTCTCCCCACCC +
Preference number: 3 (lower is better)
Translates to: GGQDILAVRTPW*RRSLLRVLSPP
Trigger: GGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCCAGAATGTCCTGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CCA 72 bp GGACTCAAGGGCAGCTCTGCAGGCCAGTTGGATGGGTaGCGGGGAGTGCAGCGAGGAAGGAAAGTGACGCTC +
Preference number: 3 (lower is better)
Translates to: GLKGSSAGQLDG*RGVQRGRKVTL
Trigger: GAGCGTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAGCTGCCCTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR CAA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGAGCTCTGCAGGCCAGTaGGATGGGTGGCGGGGAGTG +
Preference number: 3 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRSSAGQ*DGWRGV
Trigger: CACTCCCCGCCACCCATCCAACTGGCCTGCAGAGCT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR TCA 72 bp TGGCGGTCAGGACACCTTGGTGACGCCGTTCCCTGCTaGGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: WRSGHLGDAVPC*ECSPHPDEVLS
Trigger: GGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CCA 72 bp TGTGGCCATCACCGTGGGGCCTGTGTTAGAGACAGGTaGGGAAAAGAGCCCAAGAGCCGTCTGCCTGCACAG +
Preference number: 3 (lower is better)
Translates to: CGHHRGACVRDR*GKEPKSRLPAQ
Trigger: CTGTGCAGGCAGACGGCTCTTGGGCTCTTTTCCCCACCTGTCTCTAACACAGGCCCCACGGTGATGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR CAA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTTTCCATTCCTCCGGTaGCTAGGGCACAGGGGACTC +
Preference number: 3 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDFPFLR*LGHRGL
Trigger: GAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGAAA...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR-3UTR CAA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACAGCAAAGGTGTGTaGGCACTAATTGCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEYSKGV*ALIAPR
Trigger: CCTGGGAGCAATTAGTGCCAACACACCTTTGCTGTA...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CCA 72 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTaGGGACCAAGGGGAGTAGGGATGAAGATGTCCCTC +
Preference number: 3 (lower is better)
Translates to: HHYHPHLHQDCG*GPRGVGMKMSL
Trigger: GAGGGACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CCA 72 bp AAGGCACCATTATCATCCACATCTTCACCAGGACTGTaGTTGGGGACCAAGGGGAGTAGGGATGAAGATGTC +
Preference number: 3 (lower is better)
Translates to: KAPLSSTSSPGL*LGTKGSRDEDV
Trigger: GACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGGCGGTCAGGACACCTaGGTGACGCCGTTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLGGQDT*VTPFPA
Trigger: AGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CCA 72 bp TGTACAATAGAGTTAAGCAATAAAGCTGTCTTCATTTaGAAATCAAGGCACCATTATCATCCACATCTTCAC +
Preference number: 3 (lower is better)
Translates to: CTIELSNKAVFI*KSRHHYHPHLH
Trigger: GTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGCTTTATTGCTTAACTCTATTGTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCGCCGCTGGCGTCGCTaGTTGCTCACGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRRRWRR*LLTGPT
Trigger: TGTGGGACCCGTGAGCAAGCAGCGACGCCAGCGGCG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCCAGCTCCCGAGGGGTaGGGGGCCGCACCCGTACCA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQPAPEG*GAAPVP
Trigger: TGGTACGGGTGCGGCCCCCCACCCCTCGGGAGCTGG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCCCCCTTCGCATGGGTaGTGGATGCCCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRPPSHG*WMPALS
Trigger: GCTCAGAGCGGGCATCCAGCACCCATGCGAAGGGGG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGGGCGCTGGCGCTTGGTaGCCCGCTTTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRGAGAW*PALGPW
Trigger: CCATGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCC...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTGGGGAGGCGGGCGATaGGGCTGCGGCCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQWGGGR*GCGHGR
Trigger: TCTCCCATGGCCGCAGCCGCATCGCCCGCCTCCCCA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTGGGGAGGCGGGCGATaGGGCTGCGGCCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDWGGGR*GCGHGR
Trigger: TCTCCCATGGCCGCAGCCGCATCGCCCGCCTCCCCA...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGAAGGGCTCTAGGCCCTaGAGGGAGCTCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRKGSRP*RELWGA
Trigger: TGCACCCCAGAGCTCCCTGCAGGGCCTAGAGCCCTT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACACCCCTGGGCTGGGGTaGAGTTGGGTCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDTPGLG*SWVQAG
Trigger: TCCCGCCTGGACCCAACTGCACCCCAGCCCAGGGGT...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGGGAGGAAGTCGCGTTaGCATCAGTGGGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRGRKSR*HQWGAA
Trigger: CGCAGCACCCCACTGATGCCAACGCGACTTCCTCCC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTCCTGGGAGGTCCTGTaGTGGGGGCTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLSWEVL*WGLASP
Trigger: GGGGGAGGCCAGCCCCCACCACAGGACCTCCCAGGA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGGCCCACGACTGGCTTaGGCTGCAGGGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQGPRLA*AAGSGE
Trigger: CTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGGGCCATCGGGACCCCTaGGCTGGGGTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRGHRDP*AGVQLG
Trigger: ACCCAACTGCACCCCAGCCCAGGGGTCCCGATGGCC...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCCCGCTTTGGGGCCATaGGACTGTCTGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRPALGP*DCLPPR
Trigger: CCTTGGAGGCAGACAGTCCCATGGCCCCAAAGCGGG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCTTGGTGCCCCGCTTTaGGGCCATGGGACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRLGAPL*GHGTVC
Trigger: GCAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACACTGGCGCTGGCGCTTaGTGCCCCGCTTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDTGAGA*CPALGP
Trigger: TGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGT...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACCAGCAGCTGCTCGGCTaGGGCTGGCTGGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDQQLLG*GWLVER
Trigger: TCTTTCCACCAGCCAGCCTCAGCCGAGCAGCTGCTG...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGGTGCTGGGCCCCTGTaGAGGTTGGGTGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDGAGPL*RLGVRQ
Trigger: CTGCCTGACACCCAACCTTCACAGGGGCCCAGCACC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGCCGTTCCCTGCTaGGAGTGCTCTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQDAVPC*ECSPHP
Trigger: AGGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTGGGGCCATCATGGGTaGCACCCCATTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRWGHHG*HPISGQ
Trigger: CTGGCCTGAAATGGGGTGGCACCCATGATGGCCCCA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCGAAGTGCTTCTCCTaGTGGCGGGCCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSKCFS*WRASRR
Trigger: GCGCCTGGAGGCCCGCCAGCAGGAGAAGCACTTCGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGATGAGCACCTCGAAGTaGTTCTCCTGCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRMSTSK*FSCWRA
Trigger: GGCCCGCCAGCAGGAGAAGCACTTCGAGGTGCTCAT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGCCCCCTTCGCATGGGTaGTGGATGCCCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRPPSHG*WMPALS
Trigger: GCTCAGAGCGGGCATCCAGCACCCATGCGAAGGGGG...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGTGGTGGTCCCGACTTaGGAGATCCTGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRVVVPT*EILGGP
Trigger: AGGACCTCCCAGGATCTCCCAAGTCGGGACCACCAC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCTCTGGCATCTGGGTTaGAACCTCCTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRLWHLG*NLLSWA
Trigger: GGCCCAGCTGAGGAGGTTCCAACCCAGATGCCAGAG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTCCTCTTCTTCTCCATaGGCCATCGGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRSSSSP*AIGTPG
Trigger: CCCAGGGGTCCCGATGGCCCATGGAGAAGAAGAGGA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACAGGAAGGACTGGCGCTaGCGCTTGGTGCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDRKDWR*RLVPRF
Trigger: AAAGCGGGGCACCAAGCGCCAGCGCCAGTCCTTCCT...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGGCCCCTGTGAAGGTTaGGTGTCAGGCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRGPCEG*VSGRDP
Trigger: AGGGTCTCTGCCTGACACCCAACCTTCACAGGGGCC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGCAGAGCCAGCGGGGTaGAGCAGTTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQAEPAG*SSSAWR
Trigger: CCGCCATGCAGAACTGCTCCACCCCGCTGGCTCTGC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACTCTTCAAAGTGCTGCTaGGGAGGCGGGCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDSSKCC*GGGRCG
Trigger: GCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGA...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGCTCTGCAGGCCAGTTaGATGGGTGGCGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQALQAS*MGGGEC
Trigger: GCACTCCCCGCCACCCATCCAACTGGCCTGCAGAGC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCGGTGGTCAGGTACATaGTGCCGGGGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSRWSGT*CRGPPP
Trigger: GGGAGGGGGACCCCGGCATCATGTACCTGACCACCG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGACGCTGTGCGTGGTGTaGTGGAACACGTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRTLCVV*WNTSCW
Trigger: CCAACAGGACGTGTTCCAGCACACCACGCACAGCGT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCAGCGATCATCACTGTaGGGCAGTTGCCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDQRSSL*GSCPRG
Trigger: CCCTCGGGGGCAACTGCCGCACAGTGATGATCGCTG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGCCTCTTCAAAGTGCTaGTGGGGAGGCGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDASSKC*WGGGRC
Trigger: GCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRPGGGG*SEPRSY
Trigger: GTACGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCACCACCTGAACCACTaGCCGCCGCTGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQHHLNH*PPLTVQ
Trigger: CTGGACAGTCAGCGGCGGCCAGTGGTTCAGGTGGTG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACACACGTCCTGTTGGGTaGCCGCCTCGCCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDTRPVG*PPRQRP
Trigger: GGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGT...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACTGGAACACGTCCTGTTaGGTGGCCGCCTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDWNTSC*VAASPK
Trigger: CTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCA...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGGGAGGAAGTCGCGTTaGCATCAGTGGGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQGRKSR*HQWGAA
Trigger: CGCAGCACCCCACTGATGCCAACGCGACTTCCTCCC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCTGGTGTTCTGGTGGTaGTCCCGACTTGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRLVFWW*SRLGRS
Trigger: GGATCTCCCAAGTCGGGACCACCACCAGAACACCAG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGCAGGGCTGGTGTTCTaGTGGTGGTCCCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQAGLVF*WWSRLG
Trigger: CCCAAGTCGGGACCACCACCAGAACACCAGCCCTGC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGAAGAGTTCCCTTCCATaGCCCTCTCCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRKSSLP*PSPPGP
Trigger: AGGCCCAGGTGGAGAGGGCCATGGAAGGGAACTCTT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGGAAGTGGCCCACGACTaGCTTGGGCTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVREVAHD*LGLQGQ
Trigger: CTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTC...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGAGGGAGTACTGCCGCTaGGCAACGCACAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRREYCR*ATHSTF
Trigger: AAAGGTGCTGTGCGTTGCCCAGCGGCAGTACTCCCT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCAAACGCGAGGGGAATaGCAGGGGGAGGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDQTRGE*QGEEAL
Trigger: AAGGGCCTCCTCCCCCTGCCATTCCCCTCGCGTTTG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGGGCCAGTTGGATGGGTaGCGGGGAGTGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLGQLDG*RGVQRG
Trigger: TCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCC...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
3UTR CAA 72 bp CCTTGGTGGTCAGGACATTCTGGCGGTCAGGACACCTaGGTGACGCCGTTCCCTGCTGAGAGTGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PWWSGHSGGQDT*VTPFPAESALP
Trigger: GGGGAGAGCACTCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCCAGAATGTCCTGACCACCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGCATACTGGCTGATGTaGCAGTCCAGGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRAYWLM*QSRLVT
Trigger: TGTGACCAGCCTGGACTGTCACATCAGCCAGTATGC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGATCAAAGGTGGCATTaGGGTCTCGAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRDQRWH*GLEWAE
Trigger: CTCTGCCCACTCGAGACCTCAATGCCACCTTTGATC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTGGGGCCCTTCATGGTaGACAGGGGCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSWGPSW*TGAQVP
Trigger: GGGCACCTGTGCCCCTGTTCACCATGAAGGGCCCCA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGTCAGGACACCTTGGTaGCGCCGTTCCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQVRTPW*RRSLLR
Trigger: TCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGAC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGAGGCGGGTGGATCATaGGGTCAGATCGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQEAGGS*GQIETS
Trigger: GCTGGTCTCGATCTGACCTCATGATCCACCCGCCTC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGAGAGGGCATCATAAATaGGAGGGGAGGCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRRGHHK*EGRPGA
Trigger: TGCGCCCGGCCTCCCCTCTCATTTATGATGCCCTCT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGACCCGTACCACTACTTaGAGCGTGCTGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRTRTTT*SVLSST
Trigger: AGTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTCGAAGTGCTTCTCCTaGTGGCGGGCCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSSKCFS*WRASRR
Trigger: GCGCCTGGAGGCCCGCCAGCAGGAGAAGCACTTCGA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCAGTGGGGTGCTGCGTaGGGTTACGGTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSQWGAA*GYGSPW
Trigger: CCAGGGGGAACCGTAACCGCACGCAGCACCCCACTG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCCTGGAACCCGGTCCTaGTGCTTCACAAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRPGTRS*CFTKIW
Trigger: CCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTTCTCCTTTGGGGGTaGTGGGCCCCTGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRFLLWG*WAPVKV
Trigger: AACCTTCACAGGGGCCCAGCACCCCCAAAGGAGAAA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCAAGATCGCCACCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQQDRHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGTGGCGATCTTG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCTGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDLGGGA*SEPRSP
Trigger: TGGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCAG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACAGCCTGGGTCAGTCCTaGAACCCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDSLGQS*NPVLLL
Trigger: AAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCT...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGGGCTGGTGTTCTGGTaGTGGTCCCGACTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQGLVFW*WSRLGR
Trigger: TCTCCCAAGTCGGGACCACCACCAGAACACCAGCCC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCTGGCAGTGCATGTGTaGGGTTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRLAVHV*GSALAS
Trigger: AGATGCCAGAGCAGAACCCCACACATGCACTGCCAG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCGGGCTGGGGTGCAGTTaGGTCCAGGCGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSGLGCS*VQAGFP
Trigger: TGGGAATCCCGCCTGGACCCAACTGCACCCCAGCCC...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTCGGGACCCCTGGGCTaGGGTGCAGTTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGESGPLG*GAVGSR
Trigger: CCTGGACCCAACTGCACCCCAGCCCAGGGGTCCCGA...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCCTCTTCTTCTCCATaGGCCATCGGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSSSSP*AIGTPG
Trigger: CCCAGGGGTCCCGATGGCCCATGGAGAAGAAGAGGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCAGGGCAGGAAGGACTaGCGCTGGCGCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEQGRKD*RWRLVP
Trigger: GGGCACCAAGCGCCAGCGCCAGTCCTTCCTGCCCTG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTACAAGGGGCCCAGCTaGCCTCTTCAAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRYKGPS*PLQSAA
Trigger: AGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACAGCTCCTGGTGCAGGTaGCTACAGGTCCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDSSWCR*LQVQEG
Trigger: CCCCTCTTGGACCTGTAGCCACCTGCACCAGGAGCT...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCACCAGGACTGTGGTTaGGGACCAAGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQHQDCG*GPRGVG
Trigger: CCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGAGGCGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRRRRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCGCCT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGCTGGCGTCGCTGCTTaGTCACGGGTCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEAGVAA*SRVPQP
Trigger: TGGCTGTGGGACCCGTGAGCAAGCAGCGACGCCAGC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCGTGCTGTCCTCCACTaGCATCACTGTGGTGACACC +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDRAVLH*HHCGDT
Trigger: GGTGTCACCACAGTGATGGCAGTGGAGGACAGCACG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTTGGCATCAGTGGGGTaGTGCGTGCGGTTACGGTTC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQLASVG*CVRLRF
Trigger: GAACCGTAACCGCACGCAGCACCCCACTGATGCCAA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGGAACCCGGTCCTGCTaGTTCACAAAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRGTRSC*FTKIWK
Trigger: CTTCCAGATCTTTGTGAAGCAGCAGGACCGGGTTCC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGGTCTTGCGGCCCTTTaGATCGGCCAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQGLAAL*IGQGIE
Trigger: CTCAATGCCTTGGCCGATGCAAAGGGCCGCAAGACC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGAGGGCACATGGGTCTTaGGGCCCTTTGCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLRAHGS*GPLHRP
Trigger: TGGCCGATGCAAAGGGCCGCAAGACCCATGTGCCCT...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCAAGGGCTCTAGGCCCTaGAGGGAGCTCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSKGSRP*RELWGA
Trigger: TGCACCCCAGAGCTCCCTGCAGGGCCTAGAGCCCTT...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGAGCCCAAGAGCCGTCTaGCTGCACAGAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRSPRAV*LHRGHH
Trigger: ATGATGCCCTCTGTGCAGGCAGACGGCTCTTGGGCT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGACTCAAGGGCAGCTCTaGAGGCCAGTTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRTQGQL*RPVGWV
Trigger: CACCCATCCAACTGGCCTGCAGAGCTGCCCTTGAGT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCTGTGCGTGGTGTGCTaGAACACGTCCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQLCVVC*NTSCWV
Trigger: CACCCAACAGGACGTGTTCCAGCACACCACGCACAG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTATCCTGGGAGGTCCTGTaGTGGGGGCTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSWEVL*WGLASP
Trigger: GGGGGAGGCCAGCCCCCACCACAGGACCTCCCAGGA...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCGACTTGGGAGATCCTaGGAGGTCCTGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSRLGRS*EVLWWG
Trigger: CCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGGTGGTGGTCCCGACTTaGGAGATCCTGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLVVVPT*EILGGP
Trigger: AGGACCTCCCAGGATCTCCCAAGTCGGGACCACCAC...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTCCCGTGCTGAGAAGTaGCCCACGACTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSSRAEK*PTTGLG
Trigger: GCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGGGCTGGGGTGCAGTTaGGTCCAGGCGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEGLGCS*VQAGFP
Trigger: TGGGAATCCCGCCTGGACCCAACTGCACCCCAGCCC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTCGGGACCCCTGGGCTaGGGTGCAGTTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRSGPLG*GAVGSR
Trigger: CCTGGACCCAACTGCACCCCAGCCCAGGGGTCCCGA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCAGGGCAGGAAGGACTaGCGCTGGCGCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRQGRKD*RWRLVP
Trigger: GGGCACCAAGCGCCAGCGCCAGTCCTTCCTGCCCTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTTGATGACTGTGGCTaGGCAAACGCGAGGGGAATG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRFDDCG*ANARGM
Trigger: CATTCCCCTCGCGTTTGCCCAGCCACAGTCATCAAA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACTACAAGGGGCCCAGCTaGCCTCTTCAAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDYKGPS*PLQSAA
Trigger: AGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTA...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGAGCTCCTGGTGCAGGTaGCTACAGGTCCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLSSWCR*LQVQEG
Trigger: CCCCTCTTGGACCTGTAGCCACCTGCACCAGGAGCT...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGCTGGATGCCCGCTCTaGGCCAGCCAGGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEAGCPL*ASQVNQ
Trigger: CTGATTGACCTGGCTGGCTCAGAGCGGGCATCCAGC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTCTTCAGCGAGAGCCTaGTCTCCTTGGCCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGESSARA*SPWPGR
Trigger: CCGACCGGGCCAAGGAGATCAGGCTCTCGCTGAAGA...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACCCCCTGGCCAGGCCTaGAGTCCTCAAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVPPGQA*SPQGLC
Trigger: GCAGAGGCCTTGAGGACTTCAGGCCTGGCCAGGGGG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGATCAAAGGTGGCATTaGGGTCTCGAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDDQRWH*GLEWAE
Trigger: CTCTGCCCACTCGAGACCTCAATGCCACCTTTGATC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCCACTACTTGCAGCGTaGTGTCCTCCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDPLLAA*CPPLPS
Trigger: TGATGGCAGTGGAGGACAGCACGCTGCAAGTAGTGG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCAGTGGGGTGCTGCGTaGGGTTACGGTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRQWGAA*GYGSPW
Trigger: CCAGGGGGAACCGTAACCGCACGCAGCACCCCACTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACGGAACCCGGTCCTGCTaGTTCACAAAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDGTRSC*FTKIWK
Trigger: CTTCCAGATCTTTGTGAAGCAGCAGGACCGGGTTCC...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCAGGGCACATGGGTCTTaGGGCCCTTTGCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSRAHGS*GPLHRP
Trigger: TGGCCGATGCAAAGGGCCGCAAGACCCATGTGCCCT...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGGCATGTGTGGGGTTCTaGTCTGGCATCTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRACVGF*SGIWVG
Trigger: TCCAACCCAGATGCCAGAGCAGAACCCCACACATGC...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGGGATTCCCAGGGTGTaGAGGGGGCCACTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRGIPRV*RGPLSR
Trigger: GCGACTGAGTGGCCCCCTGCACACCCTGGGAATCCC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCGGCCATGGGACTGTCTaGCTCCAAGGCGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSGHGTV*LQGAWS
Trigger: AGACCAAGCGCCTTGGAGGCAGACAGTCCCATGGCC...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGGCGCTGGCGCTTGGTaGCCCGCTTTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDGAGAW*PALGPW
Trigger: CCATGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTTTCTCCTTTGGGGGTaGTGGGCCCCTGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQFLLWG*WAPVKV
Trigger: AACCTTCACAGGGGCCCAGCACCCCCAAAGGAGAAA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLPGGGG*SEPRSY
Trigger: GTACGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGTCATTCCTCCTCTACTaGCTGTGGCCATCACCGTGG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRSFLLY*LWPSPW
Trigger: CCACGGTGATGGCCACAGGCAGTAGAGGAGGAATGA...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTCATTCCTCCTCTACTaGCTGTGGCCATCACCGTGG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDSFLLY*LWPSPW
Trigger: CCACGGTGATGGCCACAGGCAGTAGAGGAGGAATGA...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTCGGTTCTCCGCCGCTaGCGTCGCTGCTTGCTCACG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRSVLRR*RRCLLT
Trigger: CGTGAGCAAGCAGCGACGCCAGCGGCGGAGAACCGA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTTCTTGGGGCCATCATaGGTGCCACCCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQFLGPS*VPPHFR
Trigger: CCTGAAATGGGGTGGCACCCATGATGGCCCCAAGAA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGCTGAGGCTGGCTGGTaGAAAGAAAGTCCTTGCACC +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDAEAGW*KESPCT
Trigger: GGTGCAAGGACTTTCTTTCCACCAGCCAGCCTCAGC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCGGCTGAGGCTGGCTaGTGGAAAGAAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSAEAG*WKESPC
Trigger: GCAAGGACTTTCTTTCCACCAGCCAGCCTCAGCCGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGGTTACGGTTCCCCCTaGTCAGTATCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDGYGSP*SVSPAA
Trigger: AGCTGCTGGAGATACTGACCAGGGGGAACCGTAACC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTGCTTCACAAAGATCTaGAAGATGGCATGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRCFTKI*KMAWER
Trigger: CCGCTCCCATGCCATCTTCCAGATCTTTGTGAAGCA...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCTGGGGACTGCTCCTaGTCTGAAGAGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSGDCS*SEEFPS
Trigger: GGAAGGGAACTCTTCAGACCAGGAGCAGTCCCCAGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTGGAACCTCCTCAGCTaGGCCTTCATCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDWNLLS*AFILIL
Trigger: GAGGATGAGGATGAAGGCCCAGCTGAGGAGGTTCCA...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCAGGCGAGGGGACTCTaGCAGTGCATGTGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSQARGL*QCMCGV
Trigger: AACCCCACACATGCACTGCCAGAGTCCCCTCGCCTG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCAGGAGGTTGGCTGCTTaGAGCAGGGAGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSRRLAA*SREYCR
Trigger: GCGGCAGTACTCCCTGCTCCAAGCAGCCAACCTCCT...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAACTGGCGCTGGCGCTTaGTGCCCCGCTTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVTGAGA*CPALGP
Trigger: TGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCACTCAAGGGCAGCTCTaGGAGTACAAGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSTQGQL*EYKGPS
Trigger: GCTGGGCCCCTTGTACTCCCAGAGCTGCCCTTGAGT...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGTGGTCAGGACATTCTaGCGGTCAGGACACCTTGGT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQVVRTF*RSGHLG
Trigger: ACCAAGGTGTCCTGACCGCCAGAATGTCCTGACCAC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGAAGGTGTTCTGGTGGTaGTCCCGACTTGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQKVFWW*SRLGRS
Trigger: GGATCTCCCAAGTCGGGACCACCACCAGAACACCTT...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGGGGAAGGTGTTCTGGTaGTGGTCCCGACTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLGKVFW*WSRLGR
Trigger: TCTCCCAAGTCGGGACCACCACCAGAACACCTTCCC...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCGGTGGTCAGGTACATaGTGCCGGGGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRWSGT*CRGPPP
Trigger: GGGAGGGGGACCCCGGCATCATGTACCTGACCACCG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCAGCAGCTGCTCGGCTaGGGCTGGCTGGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRQQLLG*GWLVER
Trigger: TCTTTCCACCAGCCAGCCTCAGCCGAGCAGCTGCTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCCCCCTGGCCAGGCCTaGAGTCCTCAAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDPPGQA*SPQGLC
Trigger: GCAGAGGCCTTGAGGACTTCAGGCCTGGCCAGGGGG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGACGCCGTTCCCTGCTaGGAGTGCTCTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVDAVPC*ECSPHP
Trigger: AGGGTGGGGAGAGCACTCTCAGCAGGGAACGGCGTC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGCATCAGCAGCATCCCTaGGATGCTTGGCAATACCCT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQHQQHP*DAWQYP
Trigger: AGGGTATTGCCAAGCATCTCAGGGATGCTGCTGATG...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTGGGGCCATCATGGGTaGCACCCCATTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEWGHHG*HPISGQ
Trigger: CTGGCCTGAAATGGGGTGGCACCCATGATGGCCCCA...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGATGAGCACCTCGAAGTaGTTCTCCTGCTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEMSTSK*FSCWRA
Trigger: GGCCCGCCAGCAGGAGAAGCACTTCGAGGTGCTCAT...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGCATCAGTGGGGTGCTaGGTGCGGTTACGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRASVGC*VRLRFP
Trigger: GGGGAACCGTAACCGCACGCAGCACCCCACTGATGC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTTGGCATCAGTGGGGTaGTGCGTGCGGTTACGGTTC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSLASVG*CVRLRF
Trigger: GAACCGTAACCGCACGCAGCACCCCACTGATGCCAA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGCCTGGAACCCGGTCCTaGTGCTTCACAAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLPGTRS*CFTKIW
Trigger: CCAGATCTTTGTGAAGCAGCAGGACCGGGTTCCAGG...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGTCATCCTCTGGGGACTaGTCCTGGTCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRSSSGD*SWSEEF
Trigger: GAACTCTTCAGACCAGGAGCAGTCCCCAGAGGATGA...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTGGAGCAGGGAGTACTaGCGCTGGGCAACGCACAGC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRWSREY*RWATHS
Trigger: GCTGTGCGTTGCCCAGCGGCAGTACTCCCTGCTCCA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGATTCCCAGGGTGTaGAGGGGGCCACTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVGIPRV*RGPLSR
Trigger: GCGACTGAGTGGCCCCCTGCACACCCTGGGAATCCC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACACCCCTGGGCTGGGGTaGAGTTGGGTCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDTPGLG*SWVQAG
Trigger: TCCCGCCTGGACCCAACTGCACCCCAGCCCAGGGGT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGGTGGAGCAGTTCTaGATGGCGGAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVGVEQF*MAEGPR
Trigger: CCTGGGCCCTTCCGCCATGCAGAACTGCTCCACCCC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCAAGATCGCCACCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEQDRHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGTGGCGATCTTG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCACCACCTGAACCACTaGCCGCCGCTGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRHHLNH*PPLTVQ
Trigger: CTGGACAGTCAGCGGCGGCCAGTGGTTCAGGTGGTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGACACGTCCTGTTGGGTaGCCGCCTCGCCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRTRPVG*PPRQRP
Trigger: GGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGT...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTCGGCTGAGGCTGGCTaGTGGAAAGAAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PAESALPTLMRSFPFLRLSAEAG*WKESPC
Trigger: GCAAGGACTTTCTTTCCACCAGCCAGCCTCAGCCGA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGTGTGACAGTCCAGGCTaGTCACATTGCTCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRCDSPG*SHCSSA
Trigger: CGCTGAAGAGCAATGTGACCAGCCTGGACTGTCACA...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCAGCCTGGAGCTGTTaGCAGATGGTAGCATACTGG +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSAWSC*QMVAYW
Trigger: CCAGTATGCTACCATCTGCCAACAGCTCCAGGCTGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTCAGCCTGGAGCTGTTaGCAGATGGTAGCATACTGG +
Preference number: 4 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDSAWSC*QMVAYW
Trigger: CCAGTATGCTACCATCTGCCAACAGCTCCAGGCTGA...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTTCTGCTCTGGCATCTaGGTTGGAACCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQFCSGI*VGTSSA
Trigger: AGCTGAGGAGGTTCCAACCCAGATGCCAGAGCAGAA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCTTCATCGGCCTCCATaGCCCAGGCTATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGELHRPP*PRLSLS
Trigger: GGACAGGGATAGCCTGGGCCATGGAGGCCGATGAAG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCCCGGTCGGCATATTTaGGGGTGTTGTACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSPGRHI*GCCTCP
Trigger: AGGACACGTACAACACCCTCAAATATGCCGACCGGG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGGTGCTGGGCCCCTGTaGAGGTTGGGTGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDGAGPL*RLGVRQ
Trigger: CTGCCTGACACCCAACCTTCACAGGGGCCCAGCACC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGTCAGGACACCTTGGTaGCGCCGTTCCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRVRTPW*RRSLLR
Trigger: TCTCAGCAGGGAACGGCGTCACCAAGGTGTCCTGAC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCGCATGTGTGGGGTTCTaGTCTGGCATCTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSACVGF*SGIWVG
Trigger: TCCAACCCAGATGCCAGAGCAGAACCCCACACATGC...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTCCTCTTGCACCAGCTaGTGTAGGGTCTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQSSCTS*CRVSNS
Trigger: AGAGTTTGAGACCCTACAGCAGCTGGTGCAAGAGGA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGAGCCCAAGAGCCGTCTaGCTGCACAGAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGESPRAV*LHRGHH
Trigger: ATGATGCCCTCTGTGCAGGCAGACGGCTCTTGGGCT...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCCAGCTCCCGAGGGGTaGGGGGCCGCACCCGTACCA +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDPAPEG*GAAPVP
Trigger: TGGTACGGGTGCGGCCCCCCACCCCTCGGGAGCTGG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTTCTTGGGGCCATCATaGGTGCCACCCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSFLGPS*VPPHFR
Trigger: CCTGAAATGGGGTGGCACCCATGATGGCCCCAAGAA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCTTTGCCCTTCTTCTTaGGGCCATCATGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSLCPSS*GHHGCH
Trigger: GTGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCTGTGCGTGGTGTGCTaGAACACGTCCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGELCVVC*NTSCWV
Trigger: CACCCAACAGGACGTGTTCCAGCACACCACGCACAG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACCTTCGCATGGGTGCTaGATGCCCGCTCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVPSHGC*MPALSQ
Trigger: CTGGCTCAGAGCGGGCATCCAGCACCCATGCGAAGG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCGCTCCCCCTTCGCATaGGTGCTGGATGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRSPFA*VLDARS
Trigger: AGAGCGGGCATCCAGCACCCATGCGAAGGGGGAGCG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCTCTGGCATCTGGGTTaGAACCTCCTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRLWHLG*NLLSWA
Trigger: GGCCCAGCTGAGGAGGTTCCAACCCAGATGCCAGAG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTGTGGGGTTCTGCTCTaGCATCTGGGTTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSCGVLL*HLGWNL
Trigger: GAGGTTCCAACCCAGATGCCAGAGCAGAACCCCACA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGAAGTGGCCCACGACTaGCTTGGGCTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVEVAHD*LGLQGQ
Trigger: CTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACCAGCCAATGCATTCATaGAAACTGGGCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LCRPVGWVAGSAARKESDQPMHS*KLGFEG
Trigger: TCCCTCAAAGCCCAGTTTCCATGAATGCATTGGCTG...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGATGCGGCTGCGGCCATaGGAGACTGAGGAACTCGCA +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRMRLRP*ETEELA
Trigger: TGCGAGTTCCTCAGTCTCCCATGGCCGCAGCCGCAT...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGCTGGGAAGGTGTTCTaGTGGTGGTCCCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRAGKVF*WWSRLG
Trigger: CCCAAGTCGGGACCACCACCAGAACACCTTCCCAGC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCCCCGAGGGAGTCTTTaGGCAGGCGGGTCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDPRGSL*AGGSVC
Trigger: GCAAACTGACCCGCCTGCTCAAAGACTCCCTCGGGG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGGGTCTCAAACTCTGTaGTCATGTCGGGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEGSQTL*SCRASG
Trigger: TCCTGACGCCCGACATGATCACAGAGTTTGAGACCC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGCGGCCATGGGAGACTaGGGAACTCGCAACGCGCTT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDAAMGD*GTRNAL
Trigger: AAGCGCGTTGCGAGTTCCTCAGTCTCCCATGGCCGC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGCCTCTTCAAAGTGCTaGTGGGGAGGCGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDASSKC*WGGGRC
Trigger: GCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCTGGCCTCTTCAAAGTaGTGCTGGGGAGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDLASSK*CWGGGR
Trigger: TCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTGTGTTGGCACTAATTaGTCCCAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQCVGTN*SQVRKA
Trigger: TGCCTTCCTTACCTGGGAGCAATTAGTGCCAACACA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACTGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVLGGGA*SEPRSP
Trigger: TGGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCAG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACCAGGACGCTGTGCGTaGTGTGCTGGAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVPGRCA*CAGTRP
Trigger: AGGACGTGTTCCAGCACACCACGCACAGCGTCCTGG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTATCGCGTTGGCATCAGTaGGGTGCTGCGTGCGGTTAC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSRWHQ*GAACGY
Trigger: GTAACCGCACGCAGCACCCCACTGATGCCAACGCGA...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCAATCAGGCTCATCTTaGCCACCTGGACAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRQSGSS*PPGQPG
Trigger: CCCAGGCTGTCCAGGTGGCCAAGATGAGCCTGATTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCGACTTGGGAGATCCTaGGAGGTCCTGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRLGRS*EVLWWG
Trigger: CCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTCTGGGGTGCAGGGCTaGTGTTCTGGTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDSGVQG*CSGGGP
Trigger: GGGACCACCACCAGAACACCAGCCCTGCACCCCAGA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACAGGAAGGACTGGCGCTaGCGCTTGGTGCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRKDWR*RLVPRF
Trigger: AAAGCGGGGCACCAAGCGCCAGCGCCAGTCCTTCCT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGAGCAGGATGGATGTCTaGGGAGGGATGTTAATACAG +
Preference number: 4 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRSRMDV*GGMLIQ
Trigger: CTGTATTAACATCCCTCCCCAGACATCCATCCTGCT...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCTCCTCTACTGCCTGTaGCCATCACCGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDLLYCL*PSPWGL
Trigger: CAGGCCCCACGGTGATGGCCACAGGCAGTAGAGGAG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGTGGCAAGGGGGAGCTaGGAAGGTGTTCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVVARGS*EGVLVV
Trigger: CACCACCAGAACACCTTCCCAGCTCCCCCTTGCCAC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR TCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAAGGCGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVRRRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCGCCT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGGCAGGAGAATTACTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRGRRIT*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGTAATTCTCCTGCC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGAGGCGGGTGGATCATaGGGTCAGATCGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDEAGGS*GQIETS
Trigger: GCTGGTCTCGATCTGACCTCATGATCCACCCGCCTC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACAGAGGGCATCATAAATaGGAGGGGAGGCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRGHHK*EGRPGA
Trigger: TGCGCCCGGCCTCCCCTCTCATTTATGATGCCCTCT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCTGTCCAGGACGCTGTaGGTGGTGTGCTGGAACACG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDLSRTL*VVCWNT
Trigger: CGTGTTCCAGCACACCACGCACAGCGTCCTGGACAG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGGCCATGGGACTGTCTaGCTCCAAGGCGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDGHGTV*LQGAWS
Trigger: AGACCAAGCGCCTTGGAGGCAGACAGTCCCATGGCC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCTTTGCCCTTCTTCTTaGGGCCATCATGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRLCPSS*GHHGCH
Trigger: GTGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACAATCAGGCTCATCTTaGCCACCTGGACAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVQSGSS*PPGQPG
Trigger: CCCAGGCTGTCCAGGTGGCCAAGATGAGCCTGATTG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGCCCACGACTGGCTTaGGCTGCAGGGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGPRLA*AAGSGE
Trigger: CTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAAGGGAGTACTGCCGCTaGGCAACGCACAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVREYCR*ATHSTF
Trigger: AAAGGTGCTGTGCGTTGCCCAGCGGCAGTACTCCCT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACAGGAGGTTGGCTGCTTaGAGCAGGGAGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDRRLAA*SREYCR
Trigger: GCGGCAGTACTCCCTGCTCCAAGCAGCCAACCTCCT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGCCATCGGGACCCCTaGGCTGGGGTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGHRDP*AGVQLG
Trigger: ACCCAACTGCACCCCAGCCCAGGGGTCCCGATGGCC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACATGCGGCTGCGGCCATaGGAGACTGAGGAACTCGCA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDMRLRP*ETEELA
Trigger: TGCGAGTTCCTCAGTCTCCCATGGCCGCAGCCGCAT...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTGTGTTAGAGACAGGTaGGGAAAAGAGCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: MGEHGSTFKTATRARRGSCVRDR*GKEPKS
Trigger: GCTCTTGGGCTCTTTTCCCCACCTGTCTCTAACACA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCACCAGGACTGTGGTTaGGGACCAAGGGGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDHQDCG*GPRGVG
Trigger: CCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGCATACTGGCTGATGTaGCAGTCCAGGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVAYWLM*QSRLVT
Trigger: TGTGACCAGCCTGGACTGTCACATCAGCCAGTATGC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGGGGCCCTTCATGGTaGACAGGGGCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDWGPSW*TGAQVP
Trigger: GGGCACCTGTGCCCCTGTTCACCATGAAGGGCCCCA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGGGTGGAGCAGTTCTaGATGGCGGAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGVEQF*MAEGPR
Trigger: CCTGGGCCCTTCCGCCATGCAGAACTGCTCCACCCC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAACGCGCTTCTTCTTaGAGGCAGAGGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDQRASS*RQRSQG
Trigger: TCCCTGGGACCTCTGCCTGCAAGAAGAAGCGCGTTG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCAAGAGCCGTCTGCCTaGACAGAGGGCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEQEPSA*TEGIIN
Trigger: ATTTATGATGCCCTCTGTGCAGGCAGACGGCTCTTG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGCTGAGGCTGGCTGGTaGAAAGAAAGTCCTTGCACC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVAEAGW*KESPCT
Trigger: GGTGCAAGGACTTTCTTTCCACCAGCCAGCCTCAGC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGCAGAGCCAGCGGGGTaGAGCAGTTCTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDAEPAG*SSSAWR
Trigger: CCGCCATGCAGAACTGCTCCACCCCGCTGGCTCTGC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGTTAGGACACCTTGGTaGTCAGGACATTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRVRTPW*SGHSGG
Trigger: ACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAAC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTATCTTCACCAGGACTGTaGTTGGGGACCAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSSPGL*LGTKGS
Trigger: ACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGA...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
3UTR CAA 72 bp GCACCATTATCATCCACATCTTCACCAGGACTGTGGTaGGGGACCAAGGGGAGTAGGGATGAAGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: APLSSTSSPGLW*GTKGSRDEDVP
Trigger: AGGGACATCTTCATCCCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCCCGGTCGGCATATTTaGGGGTGTTGTACGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDPGRHI*GCCTCP
Trigger: AGGACACGTACAACACCCTCAAATATGCCGACCGGG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGCATCAGTGGGGTGCTaGGTGCGGTTACGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDASVGC*VRLRFP
Trigger: GGGGAACCGTAACCGCACGCAGCACCCCACTGATGC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCTGGCCTCTTCAAAGTaGTGCTGGGGAGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDLASSK*CWGGGR
Trigger: TCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGCAAGAGCCGTCTGCCTaGACAGAGGGCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRQEPSA*TEGIIN
Trigger: ATTTATGATGCCCTCTGTGCAGGCAGACGGCTCTTG...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTCTGGGGACTGCTCCTaGTCTGAAGAGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDSGDCS*SEEFPS
Trigger: GGAAGGGAACTCTTCAGACCAGGAGCAGTCCCCAGA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTGTGGGGTTCTGCTCTaGCATCTGGGTTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDCGVLL*HLGWNL
Trigger: GAGGTTCCAACCCAGATGCCAGAGCAGAACCCCACA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCTGGCAGTGCATGTGTaGGGTTCTGCTCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDLAVHV*GSALAS
Trigger: AGATGCCAGAGCAGAACCCCACACATGCACTGCCAG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTCCCGTGCTGAGAAGTaGCCCACGACTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSRAEK*PTTGLG
Trigger: GCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCCCGCTTTGGGGCCATaGGACTGTCTGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDPALGP*DCLPPR
Trigger: CCTTGGAGGCAGACAGTCCCATGGCCCCAAAGCGGG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCTTGGTGCCCCGCTTTaGGGCCATGGGACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDLGAPL*GHGTVC
Trigger: GCAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCAAACGCGAGGGGAATaGCAGGGGGAGGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDQTRGE*QGEEAL
Trigger: AAGGGCCTCCTCCCCCTGCCATTCCCCTCGCGTTTG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTGCATTCATGGAAACTaGGCTTTGAGGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRCIHGN*ALREAP
Trigger: AGGAGCCTCCCTCAAAGCCCAGTTTCCATGAATGCA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGTGGTCAGGACATTCTaGCGGTCAGGACACCTTGGT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDVVRTF*RSGHLG
Trigger: ACCAAGGTGTCCTGACCGCCAGAATGTCCTGACCAC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGTTAGGACACCTTGGTaGTCAGGACATTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVVRTPW*SGHSGG
Trigger: ACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAAC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCTCCTCTACTGCCTGTaGCCATCACCGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDLLYCL*PSPWGL
Trigger: CAGGCCCCACGGTGATGGCCACAGGCAGTAGAGGAG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTCTTCACCAGGACTGTaGTTGGGGACCAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDSSPGL*LGTKGS
Trigger: ACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTATCCTCTTGCACCAGCTaGTGTAGGGTCTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSSCTS*CRVSNS
Trigger: AGAGTTTGAGACCCTACAGCAGCTGGTGCAAGAGGA...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGGAACACGTCCTGTTaGGTGGCCGCCTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDWNTSC*VAASPK
Trigger: CTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACAGCCTGGGTCAGTCCTaGAACCCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSLGQS*NPVLLL
Trigger: AAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCT...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGCCCCTGTGAAGGTTaGGTGTCAGGCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGPCEG*VSGRDP
Trigger: AGGGTCTCTGCCTGACACCCAACCTTCACAGGGGCC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCGTGCTGTCCTCCACTaGCATCACTGTGGTGACACC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDRAVLH*HHCGDT
Trigger: GGTGTCACCACAGTGATGGCAGTGGAGGACAGCACG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGTCTTGCGGCCCTTTaGATCGGCCAAGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGLAAL*IGQGIE
Trigger: CTCAATGCCTTGGCCGATGCAAAGGGCCGCAAGACC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTGCATTCATGGAAACTaGGCTTTGAGGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDCIHGN*ALREAP
Trigger: AGGAGCCTCCCTCAAAGCCCAGTTTCCATGAATGCA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGGGTCTCAAACTCTGTaGTCATGTCGGGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDGSQTL*SCRASG
Trigger: TCCTGACGCCCGACATGATCACAGAGTTTGAGACCC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGAGATTAACAGAGGGTaGGTAGCAGGATGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDEINRG*VAGWMS
Trigger: AGACATCCATCCTGCTACTCACCCTCTGTTAATCTC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACACCCGTACCACTACTTaGAGCGTGCTGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDTRTTT*SVLSST
Trigger: AGTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGT...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACTGTGTTGGCACTAATTaGTCCCAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDCVGTN*SQVRKA
Trigger: TGCCTTCCTTACCTGGGAGCAATTAGTGCCAACACA...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGCCTCCAAGGCGCTTaGTCTCCTCCTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDCLQGA*SPPLLL
Trigger: GAGAAGAAGAGGAGGAGACCAAGCGCCTTGGAGGCA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAGCCAATGCATTCATaGAAACTGGGCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDQPMHS*KLGFEG
Trigger: TCCCTCAAAGCCCAGTTTCCATGAATGCATTGGCTG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCCCCGAGGGAGTCTTTaGGCAGGCGGGTCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLPRGSL*AGGSVC
Trigger: GCAAACTGACCCGCCTGCTCAAAGACTCCCTCGGGG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAGCGATCATCACTGTaGGGCAGTTGCCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQRSSL*GSCPRG
Trigger: CCCTCGGGGGCAACTGCCGCACAGTGATGATCGCTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAGGGAGCTCTGGGGTaGAGGGCTGGTGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQGALG*RAGVLV
Trigger: CACCAGAACACCAGCCCTGCACCCCAGAGCTCCCTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTGGAGCAGGGAGTACTaGCGCTGGGCAACGCACAGC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLWSREY*RWATHS
Trigger: GCTGTGCGTTGCCCAGCGGCAGTACTCCCTGCTCCA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGACAGTCCAGGCTaGTCACATTGCTCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDCDSPG*SHCSSA
Trigger: CGCTGAAGAGCAATGTGACCAGCCTGGACTGTCACA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTTTGATGACTGTGGCTaGGCAAACGCGAGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDFDDCG*ANARGM
Trigger: CATTCCCCTCGCGTTTGCCCAGCCACAGTCATCAAA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTCTTCAAAGTGCTGCTaGGGAGGCGGGCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLSSKCC*GGGRCG
Trigger: GCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCTGTCCAGGACGCTGTaGGTGGTGTGCTGGAACACG +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLLSRTL*VVCWNT
Trigger: CGTGTTCCAGCACACCACGCACAGCGTCCTGGACAG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCCAGGACGCTGTGCGTaGTGTGCTGGAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLPGRCA*CAGTRP
Trigger: AGGACGTGTTCCAGCACACCACGCACAGCGTCCTGG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGCTTCACAAAGATCTaGAAGATGGCATGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDCFTKI*KMAWER
Trigger: CCGCTCCCATGCCATCTTCCAGATCTTTGTGAAGCA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAACGCGCTTCTTCTTaGAGGCAGAGGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQRASS*RQRSQG
Trigger: TCCCTGGGACCTCTGCCTGCAAGAAGAAGCGCGTTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGCATTTATATCTAGGTaGAGCATTAAGCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVAFISR*SIKPEF
Trigger: GAATTCAGGCTTAATGCTGCACCTAGATATAAATGC...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGAAGAGTTCCCTTCCATaGCCCTCTCCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLKSSLP*PSPPGP
Trigger: AGGCCCAGGTGGAGAGGGCCATGGAAGGGAACTCTT...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACAGCAGGATGGATGTCTaGGGAGGGATGTTAATACAG +
Preference number: 4 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSRMDV*GGMLIQ
Trigger: CTGTATTAACATCCCTCCCCAGACATCCATCCTGCT...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR TCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGGCAGGAGAATTACTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLGRRIT*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGTAATTCTCCTGCC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTGGAACCTCCTCAGCTaGGCCTTCATCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLWNLLS*AFILIL
Trigger: GAGGATGAGGATGAAGGCCCAGCTGAGGAGGTTCCA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTCATCCTCTGGGGACTaGTCCTGGTCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLSSSGD*SWSEEF
Trigger: GAACTCTTCAGACCAGGAGCAGTCCCCAGAGGATGA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCAAACGTCAGGTCTTTaGCCTTCTTCTTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLQTSGL*PSSWGH
Trigger: ATGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTTG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR GCA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGCATTTATATCTAGGTaGAGCATTAAGCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLAFISR*SIKPEF
Trigger: GAATTCAGGCTTAATGCTGCACCTAGATATAAATGC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS GCA 90 bp CCCTGGGCTGGGGTGCAGTTGGGTCCAGGCGGGATTCCCAGGGTGTaGAGGGGGCCACTCAGTCGCCTCGCCATAGTCCGGGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: PWAGVQLGPGGIPRV*RGPLSRLAIVRVTG
Trigger: CCCTGTGACCCGGACTATGGCGAGGCGACTGAGTGGCCCCCTGCACACCCTGGGAATCCCGCCTGGACCCAACTGCACCCCAGCCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS-3UTR CAA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGACTGGCGCTGGCGCTaGGTGCCCCGCTTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRDWRWR*VPRFGA
Trigger: GGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGTC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS GCA 90 bp GCAGCTCTGGGAGTACAAGGGGCCCAGCTGGCCTCTTCAAAGTGCTaGTGGGGAGGCGGGCGATGCGGCTGCGGCCATGGGAGACTGAGG +
Preference number: 5 (lower is better)
Translates to: AALGVQGAQLASSKC*WGGGRCGCGHGRLR
Trigger: CCTCAGTCTCCCATGGCCGCAGCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTACTCCCAGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CCA 90 bp GCTCTGGGAGTACAAGGGGCCCAGCTGGCCTCTTCAAAGTGCTGCTaGGGAGGCGGGCGATGCGGCTGCGGCCATGGGAGACTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: ALGVQGAQLASSKCC*GGGRCGCGHGRLRN
Trigger: GTTCCTCAGTCTCCCATGGCCGCAGCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTACTCCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CCA 90 bp CACCTGGGAGTACAAGGGGCCCAGCTGGCCTCTTCAAAGTGCTGCTaGGGAGGCGGGCGATGCGGCTGCGGCCATGGGAGACTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: HLGVQGAQLASSKCC*GGGRCGCGHGRLRN
Trigger: GTTCCTCAGTCTCCCATGGCCGCAGCCGCATCGCCCGCCTCCCCAGCAGCACTTTGAAGAGGCCAGCTGGGCCCCTTGTACTCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000590129.1
CDS-3UTR CAA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACTGGCGCTGGCGCTaGGTGCCCCGCTTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQDWRWR*VPRFGA
Trigger: GGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGTC...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS CCA 90 bp GGTCCCCATCCAGTTCCCGTGCTGAGAAGTGGCCCACGACTGGCTTaGGCTGCAGGGTCAGGCGAGGGGACTCTGGCAGTGCATGTGTGG +
Preference number: 5 (lower is better)
Translates to: GPHPVPVLRSGPRLA*AAGSGEGTLAVHVW
Trigger: CCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGAACTGGATGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 90 bp CAGGGTGGGGGCGGGAATGGGCAGTGGAACTCACTGTTCTGGTGGTaGTCCCGACTTGGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QGGGGNGQWNSLFWW*SRLGRSWEVLWWGL
Trigger: CAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACAGTGAGTTCCACTGCCCATTCCCGCCCCCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585687.1
CDS-3UTR CAA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCGGGAGGAAGTCGCGTaGGCATCAGTGGGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRREEVA*ASVGCC
Trigger: GCAGCACCCCACTGATGCCAACGCGACTTCCTCCCG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS CCA 90 bp GCTTGGGCTGCAGGGTCAGGCGAGGGGACTCTGGCAGTGCATGTGTaGGGTTCTGCTCTGGCATCTGGGTTGGAACCTCCTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AWAAGSGEGTLAVHV*GSALASGLEPPQLG
Trigger: GCCCAGCTGAGGAGGTTCCAACCCAGATGCCAGAGCAGAACCCCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 90 bp GTGGCCCACGACTGGCTTGGGCTGCAGGGTCAGGCGAGGGGACTCTaGCAGTGCATGTGTGGGGTTCTGCTCTGGCATCTGGGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: VAHDWLGLQGQARGL*QCMCGVLLWHLGWN
Trigger: GTTCCAACCCAGATGCCAGAGCAGAACCCCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS-3UTR CAA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGTGGCCCACGACTGGCTaGGGCTGCAGGGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRWPTTG*GCRVRR
Trigger: TCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCA...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGTGGCCCACGACTGGCTaGGGCTGCAGGGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQWPTTG*GCRVRR
Trigger: TCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCA...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS CCA 90 bp GCCAACTGCTTAGAACGGTCCCCATCCAGTTCCCGTGCTGAGAAGTaGCCCACGACTGGCTTGGGCTGCAGGGTCAGGCGAGGGGACTCT +
Preference number: 5 (lower is better)
Translates to: ANCLERSPSSSRAEK*PTTGLGCRVRRGDS
Trigger: AGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGAACTGGATGGGGACCGTTCTAAGCAGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS-3UTR CAA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTGGGCTGGGGTGCAGTaGGGTCCAGGCGGGATTCCC +
Preference number: 5 (lower is better)
Translates to: PAESALPTLMRSFPFLRLWAGVQ*GPGGIP
Trigger: GGGAATCCCGCCTGGACCCAACTGCACCCCAGCCCA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp AGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACATTCTGGCGGTCAGGGGCGGTCAGGACACCTaGGTGACGCCGTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RGAGRLGHLGGQDILAVRGGQDT*VTPFPA
Trigger: AGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCC...CCTGACCGCCAGAATGTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACCACCCGTACCACTACTaGCAGCGTGCTGTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LCRPVGWVAGSAARKESDHPYHY*QRAVLH
Trigger: GTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGTG...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCTGGAACACGTCCTGTaGGGTGGCCGCCTCGCCAAA +
Preference number: 5 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDLEHVL*GGRLAK
Trigger: TTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACATCACTGTGCGGCAGTaGCCCCCGAGGGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LCRPVGWVAGSAARKESDITVRQ*PPRESL
Trigger: CAAAGACTCCCTCGGGGGCAACTGCCGCACAGTGAT...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGGAGAGCCTGATCTCCTaGGCCCGGTCGGCATATTTG +
Preference number: 5 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRESLIS*ARSAYL
Trigger: CAAATATGCCGACCGGGCCAAGGAGATCAGGCTCTC...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGCTGCCTCCAAGGCGCTaGGTCTCCTCCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRLPPRR*VSSSSS
Trigger: AGAAGAAGAGGAGGAGACCAAGCGCCTTGGAGGCAG...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGGAGGCCCTTTCTCCTTaGGGGGTGCTGGGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: PAESALPTLMRSFPFLRLEALSP*GVLGPC
Trigger: ACAGGGGCCCAGCACCCCCAAAGGAGAAAGGGCCTC...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS CCA 90 bp AAGCTGTCCAGGACGCTGTGCGTGGTGTGCTGGAACACGTCCTGTTaGGTGGCCGCCTCGCCAAAGACCCGGTCAAAGACAAACGTCAGG +
Preference number: 5 (lower is better)
Translates to: KLSRTLCVVCWNTSC*VAASPKTRSKTNVR
Trigger: CCTGACGTTTGTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCTGGACAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACGCCCGGTCGGCATATTaGAGGGTGTTGTACGTGTCC +
Preference number: 5 (lower is better)
Translates to: LCRPVGWVAGSAARKESDARSAY*RVLYVS
Trigger: GGACACGTACAACACCCTCAAATATGCCGACCGGGC...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGGCTCTGGCATCTGGGTaGGAACCTCCTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PAESALPTLMRSFPFLRLALASG*EPPQLG
Trigger: GCCCAGCTGAGGAGGTTCCAACCCAGATGCCAGAGC...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGAGGGGCACCCGGCTTTaGATGACTGTGGCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: PRGVSSRGAGRLGHLGGQRGTRL*MTVAGQ
Trigger: TTGCCCAGCCACAGTCATCAAAAGCCGGGTGCCCCT...CTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS CCA 90 bp TGTCCAGGACGCTGTGCGTGGTGTGCTGGAACACGTCCTGTTGGGTaGCCGCCTCGCCAAAGACCCGGTCAAAGACAAACGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: CPGRCAWCAGTRPVG*PPRQRPGQRQTSGL
Trigger: AAGACCTGACGTTTGTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS-3UTR CAA 90 bp CTCTGCAGGCCAGTTGGATGGGTGGCGGGGAGTGCAGCGAGGAAGGAAAGTGACTCTTTGCCCTTCTTCTaGGGGCCATCATGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LCRPVGWVAGSAARKESDSLPFF*GPSWVP
Trigger: TGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAGA...GTCACTTTCCTTCCTCGCTGCACTCCCCGCCACCCATCCAACTGGCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp CTGGTGCAGGTGGCTACAGGTCCAAGAGGGGTATCCAGCAGAGGGGCCGGTAGGACAAACGTCAGGTCTTaGCCCTTCTTCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LVQVATGPRGVSSRGAGRTNVRS*PFFLGP
Trigger: TGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTTGT...CCTACCGGCCCCTCTGCTGGATACCCCTCTTGGACCTGTAGCCACCTGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCTGGAACACGTCCTGTaGGGTGGCCGCCTCGCCAAA +
Preference number: 5 (lower is better)
Translates to: MGEHGSTFKTATRARRGSLEHVL*GGRLAK
Trigger: TTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGTGCACCACCACCCCCTaGTCGGGGTCCTCGCGGATG +
Preference number: 5 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRCTTTP*SGSSRM
Trigger: CATCCGCGAGGACCCCGACAAGGGGGTGGTGGTGCA...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGAGGCCCTTTCTCCTTaGGGGGTGCTGGGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEEALSP*GVLGPC
Trigger: ACAGGGGCCCAGCACCCCCAAAGGAGAAAGGGCCTC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGGCGGTCAGGACACCTaGGTGACGCCGTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEGGQDT*VTPFPA
Trigger: AGCAGGGAACGGCGTCACCAAGGTGTCCTGACCGCC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTCAATCAGGCTCATCTaGGCCACCTGGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PAESALPTLMRSFPFLRLSIRLI*ATWTAW
Trigger: CCAGGCTGTCCAGGTGGCCAAGATGAGCCTGATTGA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACCTCAGCCTGGAGCTGTaGGCAGATGGTAGCATACTG +
Preference number: 5 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDLSLEL*ADGSIL
Trigger: CAGTATGCTACCATCTGCCAACAGCTCCAGGCTGAG...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGCCCCAGACTCTCCTCTaGAAGGGCTCTAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEPQTLL*KGSRPC
Trigger: GCAGGGCCTAGAGCCCTTCAAGAGGAGAGTCTGGGG...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp AGAGGGGTATCCAGCAGAGGGGCCGGTAGGTTAGGACACCTTGGTGGTCAGGACGAGACGGCACAGGGATaGACTCTGAACACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RGVSSRGAGRLGHLGGQDETAQG*TLNTAP
Trigger: AGGAGCTGTGTTCAGAGTCAATCCCTGTGCCGTCTC...GTCCTGACCACCAAGGTGTCCTAACCTACCGGCCCCTCTGCTGGATACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAGGGCTTGGTGCCCCGCTTaGGGGCCATGGGACTGTCTG +
Preference number: 5 (lower is better)
Translates to: PLSSTSSPGLWLGTKGSRAWCPA*GPWDCL
Trigger: CAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAGC...CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CCTGCTGAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTTGTTTCCATTCCTCCGGTaGCTAGGGCACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: PAESALPTLMRSFPFLRLFPFLR*LGHRGL
Trigger: GAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGAAA...CAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTCAATCAGGCTCATCTaGGCCACCTGGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: MGEHGSTFKTATRARRGSSIRLI*ATWTAW
Trigger: CCAGGCTGTCCAGGTGGCCAAGATGAGCCTGATTGA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCTGCCTCCAAGGCGCTaGGTCTCCTCCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MGEHGSTFKTATRARRGSLPPRR*VSSSSS
Trigger: AGAAGAAGAGGAGGAGACCAAGCGCCTTGGAGGCAG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAAGCTCTGCAGGCCAGTaGGATGGGTGGCGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSSAGQ*DGWRGV
Trigger: CACTCCCCGCCACCCATCCAACTGGCCTGCAGAGCT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp GGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGGAGAGCCTGATCTCCTaGGCCCGGTCGGCATATTTG +
Preference number: 5 (lower is better)
Translates to: GTIIIHIFTRTVVGDQGEESLIS*ARSAYL
Trigger: CAAATATGCCGACCGGGCCAAGGAGATCAGGCTCTC...CTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCCTCAGCCTGGAGCTGTaGGCAGATGGTAGCATACTG +
Preference number: 5 (lower is better)
Translates to: MGEHGSTFKTATRARRGSLSLEL*ADGSIL
Trigger: CAGTATGCTACCATCTGCCAACAGCTCCAGGCTGAG...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACGGTGGTGGTCCCGACTaGGGAGATCCTGGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDGGGPD*GDPGRS
Trigger: GGACCTCCCAGGATCTCCCAAGTCGGGACCACCACC...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACCCCAGACTCTCCTCTaGAAGGGCTCTAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVPQTLL*KGSRPC
Trigger: GCAGGGCCTAGAGCCCTTCAAGAGGAGAGTCTGGGG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTACACCCGTACCACTACTaGCAGCGTGCTGTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVHPYHY*QRAVLH
Trigger: GTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGTG...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAATCACTGTGCGGCAGTaGCCCCCGAGGGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVITVRQ*PPRESL
Trigger: CAAAGACTCCCTCGGGGGCAACTGCCGCACAGTGAT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAGGAGGTTGGCTGCTaGGAGCAGGGAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: GNQGTIIIHIFTRTVVGDQEVGC*EQGVLP
Trigger: CGGCAGTACTCCCTGCTCCAAGCAGCCAACCTCCTG...GTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTATCACCAGGACTGTGGTaGGGGACCAAGGGGAGTAGG +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVSPGLW*GTKGSR
Trigger: CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGA...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTGCACCACCACCCCCTaGTCGGGGTCCTCGCGGATG +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDCTTTP*SGSSRM
Trigger: CATCCGCGAGGACCCCGACAAGGGGGTGGTGGTGCA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATGGGGGAACATGGCAGCACCTTTAAAACAGCAACACGGGCCAGGCGTGGTAGCTACAGCAAAGGTGTGTaGGCACTAATTGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: MGEHGSTFKTATRARRGSYSKGV*ALIAPR
Trigger: CCTGGGAGCAATTAGTGCCAACACACCTTTGCTGTA...GCTACCACGCCTGGCCCGTGTTGCTGTTTTAAAGGTGCTGCCATGTTCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTCGGGCGTCAGGAGGTaGGCTGCTTGGAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSGVRR*AAWSRE
Trigger: CTCCCTGCTCCAAGCAGCCAACCTCCTGACGCCCGA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp CACCATTATCATCCACATCTTCACCAGGACTGTGGTTGGGGACCAAGGGGAGTAACAAACGTCAGGTCTTaGCCCTTCTTCTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: HHYHPHLHQDCGWGPRGVTNVRS*PFFLGP
Trigger: TGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTTGT...TACTCCCCTTGGTCCCCAACCACAGTCCTGGTGAAGATGTGGATGATAATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACCAGGAGGTTGGCTGCTaGGAGCAGGGAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDQEVGC*EQGVLP
Trigger: CGGCAGTACTCCCTGCTCCAAGCAGCCAACCTCCTG...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGCGCTGGCGTCGCTGCTaGCTCACGGGTCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLRWRRC*LTGPTA
Trigger: GGCTGTGGGACCCGTGAGCAAGCAGCGACGCCAGCG...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACAGGGGCACCCGGCTTTaGATGACTGTGGCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDRGTRL*MTVAGQ
Trigger: TTGCCCAGCCACAGTCATCAAAAGCCGGGTGCCCCT...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTGGGCTGGGGTGCAGTaGGGTCCAGGCGGGATTCCC +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLWAGVQ*GPGGIP
Trigger: GGGAATCCCGCCTGGACCCAACTGCACCCCAGCCCA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACGTCCCCTCCTCCTTCTaGTCTTCATCGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDVPSSF*SSSASM
Trigger: CATGGAGGCCGATGAAGACAAGAAGGAGGAGGGGAC...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587309.5
CDS-3UTR CAA 90 bp GCTGTCTTCATTTGGAAATCAAGGCACCATTATCATCCACATCTTCACCAGGACTCTTTGCCCTTCTTCTaGGGGCCATCATGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: AVFIWKSRHHYHPHLHQDSLPFF*GPSWVP
Trigger: TGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAGA...GTCCTGGTGAAGATGTGGATGATAATGGTGCCTTGATTTCCAAATGAAGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGGTGGTGGTCCCGACTaGGGAGATCCTGGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLGGGPD*GDPGRS
Trigger: GGACCTCCCAGGATCTCCCAAGTCGGGACCACCACC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTCGGGCGTCAGGAGGTaGGCTGCTTGGAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLSGVRR*AAWSRE
Trigger: CTCCCTGCTCCAAGCAGCCAACCTCCTGACGCCCGA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGCTTGGTGCCCCGCTTaGGGGCCATGGGACTGTCTG +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLAWCPA*GPWDCL
Trigger: CAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAGC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGCTCTGGCATCTGGGTaGGAACCTCCTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLALASG*EPPQLG
Trigger: GCCCAGCTGAGGAGGTTCCAACCCAGATGCCAGAGC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTCACCAGGACTGTGGTaGGGGACCAAGGGGAGTAGG +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLSPGLW*GTKGSR
Trigger: CCTACTCCCCTTGGTCCCCAACCACAGTCCTGGTGA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGCCCGGTCGGCATATTaGAGGGTGTTGTACGTGTCC +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLARSAY*RVLYVS
Trigger: GGACACGTACAACACCCTCAAATATGCCGACCGGGC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGGAGACGGCACAGGGATaGACTCTGAACACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLETAQG*TLNTAP
Trigger: AGGAGCTGTGTTCAGAGTCAATCCCTGTGCCGTCTC...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS-3UTR CAA 90 bp ATATCTAGGTGCAGCATTAAGCCTGAATTCCCCTTTACACTTTATTTTACACTGTACAGCAAAGGTGTGTaGGCACTAATTGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ISRCSIKPEFPFTLYFTLYSKGV*ALIAPR
Trigger: CCTGGGAGCAATTAGTGCCAACACACCTTTGCTGTA...CAGTGTAAAATAAAGTGTAAAGGGGAATTCAGGCTTAATGCTGCACCTAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000593135.6
CDS GCA 72 bp GGGGTGCAGTTGGGTCCAGGCGGGATTCCCAGGGTGTaGAGGGGGCCACTCAGTCGCCTCGCCATAGTCCGG +
Preference number: 6 (lower is better)
Translates to: GVQLGPGGIPRV*RGPLSRLAIVR
Trigger: CCGGACTATGGCGAGGCGACTGAGTGGCCCCCTGCACACCCTGGGAATCCCGCCTGGACCCAACTGCACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp ATGTTGGCCCCCTCCCGCAGCCGCTCCCCCTTCGCATaGGTGCTGGATGCCCGCTCTGAGCCAGCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: MLAPSRSRSPFA*VLDARSEPARS
Trigger: TGACCTGGCTGGCTCAGAGCGGGCATCCAGCACCCATGCGAAGGGGGAGCGGCTGCGGGAGGGGGCCAACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GGGTGCAGGGCTGGTGTTCTGGTGGTGGTCCCGACTTaGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GCRAGVLVVVPT*EILGGPVVGAG
Trigger: GCCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACACCAGCCCTGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 72 bp GGGGTGCAGGGCTGGTGTTCTGGTGGTGGTCCCGACTaGGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GVQGWCSGGGPD*GDPGRSCGGGW
Trigger: CCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACACCAGCCCTGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 72 bp GCAGGAAGGACTGGCGCTGGCGCTTGGTGCCCCGCTTaGGGGCCATGGGACTGTCTGCCTCCAAGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: AGRTGAGAWCPA*GPWDCLPPRRL
Trigger: CAAGCGCCTTGGAGGCAGACAGTCCCATGGCCCCAAAGCGGGGCACCAAGCGCCAGCGCCAGTCCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp CCTCTTCTTCTCCATGGGCCATCGGGACCCCTGGGCTaGGGTGCAGTTGGGTCCAGGCGGGATTCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PLLLHGPSGPLG*GAVGSRRDSQG
Trigger: ACCCTGGGAATCCCGCCTGGACCCAACTGCACCCCAGCCCAGGGGTCCCGATGGCCCATGGAGAAGAAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GGGAGCTGGGAAGGTGTTCTGGTGGTGGTCCCGACTTaGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GSWEGVLVVVPT*EILGGPVVGAG
Trigger: GCCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACACCTTCCCAGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000590129.1
CDS CAA 72 bp GGGGAGCTGGGAAGGTGTTCTGGTGGTGGTCCCGACTaGGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GELGRCSGGGPD*GDPGRSCGGGW
Trigger: CCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACACCTTCCCAGCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587309.5
ENST00000590129.1
CDS CAA 90 bp CGGTCCCCATCCAGTTCCCGTGCTGAGAAGTGGCCCACGACTGGCTaGGGCTGCAGGGTCAGGCGAGGGGACTCTGGCAGTGCATGTGTG +
Preference number: 6 (lower is better)
Translates to: RSPSSSRAEKWPTTG*GCRVRRGDSGSACV
Trigger: CACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGAACTGGATGGGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS TCA 72 bp CCGCTCCCCCTTCGCATGGGTGCTGGATGCCCGCTCTaGGCCAGCCAGGTCAATCAGGCTCATCTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: PLPLRMGAGCPL*ASQVNQAHLGH
Trigger: GTGGCCAAGATGAGCCTGATTGACCTGGCTGGCTCAGAGCGGGCATCCAGCACCCATGCGAAGGGGGAGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS GCA 72 bp ACCTTTCGTCGGTTCTCCGCCGCTGGCGTCGCTGCTTaGTCACGGGTCCCACAGCCACACCACAGACAGCAG +
Preference number: 6 (lower is better)
Translates to: TFRRFSAAGVAA*SRVPQPHHRQQ
Trigger: CTGCTGTCTGTGGTGTGGCTGTGGGACCCGTGAGCAAGCAGCGACGCCAGCGGCGGAGAACCGACGAAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 72 bp CACCTTTCGTCGGTTCTCCGCCGCTGGCGTCGCTGCTaGCTCACGGGTCCCACAGCCACACCACAGACAGCA +
Preference number: 6 (lower is better)
Translates to: HLSSVLRRWRRC*LTGPTATPQTA
Trigger: TGCTGTCTGTGGTGTGGCTGTGGGACCCGTGAGCAAGCAGCGACGCCAGCGGCGGAGAACCGACGAAAGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 72 bp TCCAGTTCCCGTGCTGAGAAGTGGCCCACGACTGGCTaGGGCTGCAGGGTCAGGCGAGGGGACTCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SSSRAEKWPTTG*GCRVRRGDSGS
Trigger: ACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGAACTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS TCA 72 bp CCAGGCGCCTGTACAGTTCCACGGTGGTCAGGTACATaGTGCCGGGGTCCCCCTCCCTTCCCAGCATGGTGT +
Preference number: 6 (lower is better)
Translates to: PGACTVPRWSGT*CRGPPPFPAWC
Trigger: ACACCATGCTGGGAAGGGAGGGGGACCCCGGCATCATGTACCTGACCACCGTGGAACTGTACAGGCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp TGTAGCCCTGGAGGAAGCTGTCCAGGACGCTGTGCGTaGTGTGCTGGAACACGTCCTGTTGGGTGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: CSPGGSCPGRCA*CAGTRPVGWPP
Trigger: AGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCTGGACAGCTTCCTCCAGGGCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp CATCAGTGGGGTGCTGCGTGCGGTTACGGTTCCCCCTaGTCAGTATCTCCAGCAGCTGCTCGGCTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: HQWGAACGYGSP*SVSPAAARLRL
Trigger: CAGCCTCAGCCGAGCAGCTGCTGGAGATACTGACCAGGGGGAACCGTAACCGCACGCAGCACCCCACTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GACTGGCTTGGGCTGCAGGGTCAGGCGAGGGGACTCTaGCAGTGCATGTGTGGGGTTCTGCTCTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: DWLGLQGQARGL*QCMCGVLLWHL
Trigger: CAGATGCCAGAGCAGAACCCCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGCAGCCCAAGCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GCAGTGGAACTCACTGTTCTGGTGGTGGTCCCGACTTaGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: AVELTVLVVVPT*EILGGPVVGAG
Trigger: GCCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACAGTGAGTTCCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585687.1
CDS CCA 72 bp GGGGGCGGGAATGGGCAGTGGAACTCACTGTTCTGGTaGTGGTCCCGACTTGGGAGATCCTGGGAGGTCCTG +
Preference number: 6 (lower is better)
Translates to: GGGNGQWNSLFW*WSRLGRSWEVL
Trigger: CAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACAGTGAGTTCCACTGCCCATTCCCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585687.1
CDS CAA 72 bp CAGGACGCTGTGCGTGGTGTGCTGGAACACGTCCTGTaGGGTGGCCGCCTCGCCAAAGACCCGGTCAAAGAC +
Preference number: 6 (lower is better)
Translates to: QDAVRGVLEHVL*GGRLAKDPVKD
Trigger: GTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CAA 72 bp GGCAGTGGAACTCACTGTTCTGGTGGTGGTCCCGACTaGGGAGATCCTGGGAGGTCCTGTGGTGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GSGTHCSGGGPD*GDPGRSCGGGW
Trigger: CCAGCCCCCACCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACAGTGAGTTCCACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585687.1
CDS CCA 72 bp CGCTGTGCGTGGTGTGCTGGAACACGTCCTGTTGGGTaGCCGCCTCGCCAAAGACCCGGTCAAAGACAAACG +
Preference number: 6 (lower is better)
Translates to: RCAWCAGTRPVG*PPRQRPGQRQT
Trigger: CGTTTGTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp AGGACGCTGTGCGTGGTGTGCTGGAACACGTCCTGTTaGGTGGCCGCCTCGCCAAAGACCCGGTCAAAGACA +
Preference number: 6 (lower is better)
Translates to: RTLCVVCWNTSC*VAASPKTRSKT
Trigger: TGTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GCAGGGTCAGGCGAGGGGACTCTGGCAGTGCATGTGTaGGGTTCTGCTCTGGCATCTGGGTTGGAACCTCCT +
Preference number: 6 (lower is better)
Translates to: AGSGEGTLAVHV*GSALASGLEPP
Trigger: AGGAGGTTCCAACCCAGATGCCAGAGCAGAACCCCACACATGCACTGCCAGAGTCCCCTCGCCTGACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GGCGGGAATGGGCAGTGGAACTCACTGTTCTGGTGGTaGTCCCGACTTGGGAGATCCTGGGAGGTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: GGNGQWNSLFWW*SRLGRSWEVLW
Trigger: CCACAGGACCTCCCAGGATCTCCCAAGTCGGGACCACCACCAGAACAGTGAGTTCCACTGCCCATTCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585687.1
CDS CAA 72 bp CTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTaGCTAGGGCACAGGGGACTCAAGGGCAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPTLMRSFPFLR*LGHRGLKGSSG
Trigger: CCCAGAGCTGCCCTTGAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 90 bp GAAGCTGTCCAGGACGCTGTGCGTGGTGTGCTGGAACACGTCCTGTaGGGTGGCCGCCTCGCCAAAGACCCGGTCAAAGACAAACGTCAG +
Preference number: 6 (lower is better)
Translates to: EAVQDAVRGVLEHVL*GGRLAKDPVKDKRQ
Trigger: CTGACGTTTGTCTTTGACCGGGTCTTTGGCGAGGCGGCCACCCAACAGGACGTGTTCCAGCACACCACGCACAGCGTCCTGGACAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS TCA 72 bp CAACTGCTTAGAACGGTCCCCATCCAGTTCCCGTGCTaGGAAGTGGCCCACGACTGGCTTGGGCTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: QLLRTVPIQFPC*EVAHDWLGLQG
Trigger: ACCCTGCAGCCCAAGCCAGTCGTGGGCCACTTCTCAGCACGGGAACTGGATGGGGACCGTTCTAAGCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp GCTGGGCCTTCATCCTCATCCTCTGGGGACTGCTCCTaGTCTGAAGAGTTCCCTTCCATGGCCCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: AGPSSSSSGDCS*SEEFPSMALST
Trigger: GGTGGAGAGGGCCATGGAAGGGAACTCTTCAGACCAGGAGCAGTCCCCAGAGGATGAGGATGAAGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CAA 90 bp GAGAGTGCTCTCCCCACCCTGATGAGGTCCTTTCCATTCCTCCGGTaGCTAGGGCACAGGGGACTCAAGGGCAGCTCTGGGAGTACAAGG +
Preference number: 6 (lower is better)
Translates to: ESALPTLMRSFPFLR*LGHRGLKGSSGSTR
Trigger: CCTTGTACTCCCAGAGCTGCCCTTGAGTCCCCTGTGCCCTAGCAACCGGAGGAATGGAAAGGACCTCATCAGGGTGGGGAGAGCACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS CAA 90 bp GTGGCCGCCTCGCCAAAGACCCGGTCAAAGACAAACGTCAGGTCTTaGCCCTTCTTCTTGGGGCCATCATGGGTGCCACCCCATTTCAGG +
Preference number: 6 (lower is better)
Translates to: VAASPKTRSKTNVRS*PFFLGPSWVPPHFR
Trigger: CCTGAAATGGGGTGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTTGTCTTTGACCGGGTCTTTGGCGAGGCGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS GCA 72 bp CACCCGTACCACTACTTGCAGCGTGCTGTCCTCCACTaGCATCACTGTGGTGACACCTTTCGTCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: HPYHYLQRAVLH*HHCGDTFRRFS
Trigger: GGAGAACCGACGAAAGGTGTCACCACAGTGATGGCAGTGGAGGACAGCACGCTGCAAGTAGTGGTACGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593135.6
CDS GCA 72 bp CATGGGAGACTGAGGAACTCGCAACGCGCTTCTTCTTaGAGGCAGAGGTCCCAGGGAGGGAAGATGTTGGCT +
Preference number: 6 (lower is better)
Translates to: HGRLRNSQRASS*RQRSQGGKMLA
Trigger: AGCCAACATCTTCCCTCCCTGGGACCTCTGCCTGCAAGAAGAAGCGCGTTGCGAGTTCCTCAGTCTCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CAA 72 bp TCGCCAAAGACCCGGTCAAAGACAAACGTCAGGTCTTaGCCCTTCTTCTTGGGGCCATCATGGGTGCCACCC +
Preference number: 6 (lower is better)
Translates to: SPKTRSKTNVRS*PFFLGPSWVPP
Trigger: GGGTGGCACCCATGATGGCCCCAAGAAGAAGGGCAAAGACCTGACGTTTGTCTTTGACCGGGTCTTTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CAA 72 bp CTTCTTCCTCAGAGCGGCTACCTCAGCCTGGAGCTGTaGGCAGATGGTAGCATACTGGCTGATGTGACAGTC +
Preference number: 6 (lower is better)
Translates to: LLPQSGYLSLEL*ADGSILADVTV
Trigger: GACTGTCACATCAGCCAGTATGCTACCATCTGCCAACAGCTCCAGGCTGAGGTAGCCGCTCTGAGGAAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585687.1
ENST00000587309.5
ENST00000590129.1
ENST00000593135.6
CDS CCA 72 bp ATAGAGTCCATAAGGGACAGATGCTTAGGTGACAAATaGGCAGTAGCTGAGGGTAGGAGGAGTCAGGGATTT +
Preference number: 6 (lower is better)
Translates to: IESIRDRCLGDK*AVAEGRRSQGF
Trigger: AAATCCCTGACTCCTCCTACCCTCAGCTACTGCCCATTTGTCACCTAAGCATCTGTCCCTTATGGACTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585687.1