RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF16B (Homo sapiens)

Ensembl gene IDs: ENSG00000089177

Ensembl transcript IDs: ENST00000354981.7, ENST00000355755.7, ENST00000408042.5, ENST00000450176.1, ENST00000635823.1, ENST00000636835.1

Found 783 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCTaGATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTC +
Preference number: 1 (lower is better)
Translates to: QQEEADPDPRMGELP*IGARFDEKALLWWF
Trigger: GAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 90 bp GTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTaGCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: VFSRRRQTRILAWGS*PASEPASTRRHCCG
Trigger: ACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR CCA 90 bp TGCATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATaGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: CMSVFSRRRQTRILA*GSCPASEPASTRRH
Trigger: GTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR CCA 90 bp CCACTTTGGGAGGTCCCAGGCTGGCTGGGCTCAGGGAACCCACGATaGCCCAACCACATCTATCTTGCCACAGGGGACGAACTTTGCTGC +
Preference number: 1 (lower is better)
Translates to: PLWEVPGWLGSGNPR*PNHIYLATGDELCC
Trigger: GCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCGTGGGTTCCCTGAGCCCAGCCAGCCTGGGACCTCCCAAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 90 bp CTGGCTGGGCTCAGGGAACCCACGATGGCCCAACCACATCTATCTTaGCACAGGGGACGAACTTTGCTGCGCAGTGAGAAGGAAGCACTG +
Preference number: 1 (lower is better)
Translates to: LAGLREPTMAQPHLS*HRGRTLLRSEKEAL
Trigger: CAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCGTGGGTTCCCTGAGCCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 90 bp ACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTaGCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAA +
Preference number: 1 (lower is better)
Translates to: TVGKGHVQPQWNGNG*LSGPHQQAEHPIPK
Trigger: TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR CCA 90 bp TGCCACAGGGGACGAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTaGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCC +
Preference number: 1 (lower is better)
Translates to: CHRGRTLLRSEKEAL*EKATFNRNGTVTAA
Trigger: GGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 90 bp CGATGGCCCAACCACATCTATCTTGCCACAGGGGACGAACTTTGCTaGGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACC +
Preference number: 1 (lower is better)
Translates to: RWPNHIYLATGDELC*AVRRKHCGKRPRST
Trigger: GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 90 bp CCACGATGGCCCAACCACATCTATCTTGCCACAGGGGACGAACTTTaGTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCA +
Preference number: 1 (lower is better)
Translates to: PRWPNHIYLATGDEL*CAVRRKHCGKRPRS
Trigger: TGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGATGGGGGAGCTGCCCTaGATCGGAGCCCGCTTCGAC +
Preference number: 2 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQMGELP*IGARFD
Trigger: GTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCAT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGTGGCCCGGGCCCGCTaGTGCATGTCTGTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LWEKATFNRNGTVTAACQVARAR*CMSVFS
Trigger: GCTGAAGACAGACATGCAGCAGCGGGCCCGGGCCAC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCCTCGCATGGGGGAGCTaGCCTGCATCGGAGCCCGCT +
Preference number: 2 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTLAWGS*PASEPA
Trigger: AGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAG...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTATGGAAACGTGAGGTaGCCCGGGCCCGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLYGNVR*PGPAAA
Trigger: TGCAGCAGCGGGCCCGGGCCACCTCACGTTTCCATA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATCGACGAGAAGGCACTaGTGTGGTGGTTCCTCCATC +
Preference number: 2 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKSTRRH*CGGSSI
Trigger: GATGGAGGAACCACCACAGCAGTGCCTTCTCGTCGA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTACTAGGTATGGAAACGTaGGGTGGCCCGGGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: SEKEALWEKATFNRNGTVLGMET*GGPGPL
Trigger: CAGCGGGCCCGGGCCACCTCACGTTTCCATACCTAG...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR CAA 90 bp CCCACGATGGCCCAACCACATCTATCTTGCCACAGGGGACGAACTTaGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTC +
Preference number: 2 (lower is better)
Translates to: PTMAQPHLSCHRGRT*LRSEKEALWEKATF
Trigger: GAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCTCGCATGGGGGAGCTaGCCTGCATCGGAGCCCGCT +
Preference number: 2 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWILAWGS*PASEPA
Trigger: AGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCTAGGTATGGAAACGTaGGGTGGCCCGGGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWILGMET*GGPGPL
Trigger: CAGCGGGCCCGGGCCACCTCACGTTTCCATACCTAG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGCCCGGGCCCGCTGCTaGATGTCTGTCTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIARARC*MSVFSR
Trigger: CCTGCTGAAGACAGACATGCAGCAGCGGGCCCGGGC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR CCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTATGGAAACGTGAGGTaGCCCGGGCCCGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIYGNVR*PGPAAA
Trigger: TGCAGCAGCGGGCCCGGGCCACCTCACGTTTCCATA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTGGAACGGTAACGGCTaGCTGTCAGGGCCACATCAG +
Preference number: 2 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIWNGNG*LSGPHQ
Trigger: CTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 72 bp GAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCTaGATCGGAGCCCGCTTCGACGAGAAGGCACTGCTG +
Preference number: 3 (lower is better)
Translates to: EADPDPRMGELP*IGARFDEKALL
Trigger: CAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 72 bp AAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTaGCTGTCAGGGCCACATCAGCAGGCAGAGCATCCC +
Preference number: 3 (lower is better)
Translates to: KGHVQPQWNGNG*LSGPHQQAEHP
Trigger: GGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR CCA 72 bp GGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATaGAACGGTAACGGCTGCCTGTCAGGGCCACATCAG +
Preference number: 3 (lower is better)
Translates to: GSTVGKGHVQPQ*NGNGCLSGPHQ
Trigger: CTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR GCA 72 bp CCCAACCACATCTATCTTGCCACAGGGGACGAACTTTaGTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: PNHIYLATGDEL*CAVRRKHCGKR
Trigger: CCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
3UTR-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGGTAAGCCACCCACTTaGGGAGGTCCCAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIGKPPT*GGPRLA
Trigger: AGCCAGCCTGGGACCTCCCAAAGTGGGTGGCTTACC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCTCCCGGCCGGACCTaGAGTTCCGCGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVAPGRT*SSAAAP
Trigger: TGGGGCTGCCGCGGAACTCCAGGTCCGGCCGGGAGC...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCTCGCATGGGGGAGCTaGCCTGCATCGGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWLAWGS*PASEPA
Trigger: AGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGCTCCCGGCCGGACCTaGAGTTCCGCGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLAPGRT*SSAAAP
Trigger: TGGGGCTGCCGCGGAACTCCAGGTCCGGCCGGGAGC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGCCCGGGCCCGCTGCTaGATGTCTGTCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWARARC*MSVFSR
Trigger: CCTGCTGAAGACAGACATGCAGCAGCGGGCCCGGGC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGTCTCCTCTCCAGCCTaGCCAGGGCCCGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLVSSPA*PGPAPA
Trigger: CGCTGGAGCGGGCCCTGGCCAGGCTGGAGAGGAGAC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGACCCGGATCCTCGCATaGGGGAGCTGCCCTGCATCG +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVTRILA*GSCPAS
Trigger: CGATGCAGGGCAGCTCCCCCATGCGAGGATCCGGGT...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGGTCGCCGGCGACGCTaGCTACTCAGATCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSGRRRR*LLRSRL
Trigger: GAGCCGCGATCTGAGTAGCCAGCGTCGCCGGCGACC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGTCTCCTCTCCAGCCTaGCCAGGGCCCGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCVSSPA*PGPAPA
Trigger: CGCTGGAGCGGGCCCTGGCCAGGCTGGAGAGGAGAC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTCTCCAGGGCTTCCTaGTCAGCCTCCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVFSRAS*SASRLA
Trigger: GGCTAGCCTGGAGGCTGAGCAGGAAGCCCTGGAGAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCATGGGGGAGCTGCCCTaGATCGGAGCCCGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSMGELP*IGARFD
Trigger: GTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCCAT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGTGGCCCGGGCCCGCTaGTGCATGTCTGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSVARAR*CMSVFS
Trigger: GCTGAAGACAGACATGCAGCAGCGGGCCCGGGCCAC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGTGGCCCGGGCCCGCTaGTGCATGTCTGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLVARAR*CMSVFS
Trigger: GCTGAAGACAGACATGCAGCAGCGGGCCCGGGCCAC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGGTCGCCGGCGACGCTaGCTACTCAGATCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCGRRRR*LLRSRL
Trigger: GAGCCGCGATCTGAGTAGCCAGCGTCGCCGGCGACC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTTCCCTGCGATTCATaGGCCGGACCCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWFPCDS*AGPSRP
Trigger: TGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTCTGTCTCCTTGCGCTaGGTCTCCACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWSVSLR*VSTSCC
Trigger: GCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCGGTCATGGACAAGCTaGAGGAGGACAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVRSWTS*RRTEGH
Trigger: GTGGCCTTCTGTCCTCCTTCAGCTTGTCCATGACCG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGGAAGCTGCGGCGTTTaGGGCTCTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLGSCGV*GSPPAC
Trigger: GCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGGCTCCGGTGGCATCTaGACGCTCACTTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLGSGGI*TLTSGK
Trigger: CTTGCCGGAAGTGAGCGTGCAGATGCCACCGGAGCC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTGCTTCTCTCGGAGCTaGTCTTCCAGATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWCFSRS*SSRWAT
Trigger: CGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTGCTTCTCTCGGAGCTaGTCTTCCAGATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVCFSRS*SSRWAT
Trigger: CGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGAGGGTGGAGTGCCTCTaGAGCGCAGAATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVRVECL*SAECLL
Trigger: GAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCT...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCCCGGTGGCTCCGGTaGCATCTGCACGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCPRWLR*HLHAHF
Trigger: GAAGTGAGCGTGCAGATGCCACCGGAGCCACCGGGG...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCAGGTCCCAGGCTGGCTaGGCTCAGGGAACCCACGAT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSRSQAG*AQGTHD
Trigger: ATCGTGGGTTCCCTGAGCCCAGCCAGCCTGGGACCT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTGCAGCTCGATTTCCTaGTGTTCCCTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWCSSIS*CSLSLS
Trigger: GGAGAGGCTGAGGGAACAGCAGGAAATCGAGCTGCA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGGGGACGAACTTTGCTaGGCAGTGAGAAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWGDELC*AVRRKH
Trigger: GTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCCCCCGGTGGCTCCGGTaGCATCTGCACGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISPRWLR*HLHAHF
Trigger: GAAGTGAGCGTGCAGATGCCACCGGAGCCACCGGGG...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGCCTCCAGGCTAGCCTaGAGCCCTGACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCASRLA*SPDCSL
Trigger: CAGAGAGCAGTCAGGGCTCCAGGCTAGCCTGGAGGC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAGGTCCCAGGCTGGCTaGGCTCAGGGAACCCACGAT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCRSQAG*AQGTHD
Trigger: ATCGTGGGTTCCCTGAGCCCAGCCAGCCTGGGACCT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGTAAGCCACCCACTTTaGGAGGTCCCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSVSHPL*EVPGWL
Trigger: CAGCCAGCCTGGGACCTCCCAAAGTGGGTGGCTTAC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCCCCTCACGGCCACCTTaGCCGATGCCATCGCTCATC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISPSRPP*PMPSLI
Trigger: GATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGG...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGGTCATGGACAAGCTaGAGGAGGACAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLRSWTS*RRTEGH
Trigger: GTGGCCTTCTGTCCTCCTTCAGCTTGTCCATGACCG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGCTAGGTATGGAAACGTaGGGTGGCCCGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQLGMET*GGPGPL
Trigger: CAGCGGGCCCGGGCCACCTCACGTTTCCATACCTAG...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGGCCACCTTGACCGATaGCATCGCTCATCCCGAACC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCGHLDR*HRSSRT
Trigger: GGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGGCTCTCCTCCTGCTTaGGAATCTGGAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSGSPPA*ESGAAR
Trigger: TCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCTGACTGCTCTCTGCTaGCACTGTTCAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWLTALC*HCSDWQ
Trigger: TTGCCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCTGACTGCTCTCTGCTaGCACTGTTCAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVLTALC*HCSDWQ
Trigger: TTGCCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGCTCGCATGGGGGAGCTaGCCTGCATCGGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLLAWGS*PASEPA
Trigger: AGCGGGCTCCGATGCAGGGCAGCTCCCCCATGCGAG...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTGGAACGGTAACGGCTaGCTGTCAGGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSWNGNG*LSGPHQ
Trigger: CTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGACAGGGGACGAACTTTaGTGCGCAGTGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVTGDEL*CAVRRK
Trigger: CTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGT...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGGTCCGTTCTCTTCCTaGGTCCCCAGTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKGPFSS*VPSASF
Trigger: GAAGGAGGCACTGGGGACTCAGGAAGAGAACGGACC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGGTCCGTTCTCTTCCTaGGTCCCCAGTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISGPFSS*VPSASF
Trigger: GAAGGAGGCACTGGGGACTCAGGAAGAGAACGGACC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCATGAGACCTGCTACTaGCGTCGTTCATCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSHETCY*RRSSQS
Trigger: CGACTGGGATGAACGACGTCAGTAGCAGGTCTCATG...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGCTAGGTATGGAAACGTaGGGTGGCCCGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLLGMET*GGPGPL
Trigger: CAGCGGGCCCGGGCCACCTCACGTTTCCATACCTAG...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCAGGTCATCTGGATTTaGGCCCAAAGAGCGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVQVIWI*AQRARN
Trigger: GTTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCACCCCGTCCCGTGGCTaGTGTAGTCAAAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLTPSRG*CSQRLL
Trigger: AAGGAGTCTTTGACTACAGCAGCCACGGGACGGGGT...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCAAGTCCTTTTCCCTaGGATTCATGGGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCPSPFP*DSWAGP
Trigger: GGGTCCGGCCCATGAATCGCAGGGAAAAGGACTTGG...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTGGGTCTCCACCTCCTaGTGCATCCGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCWVSTS*CIRSSS
Trigger: TGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCTTTTGCAGCTGGTTTaGATTGGCCTGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVLLQLV*IGLVLC
Trigger: GCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCTCGACGAGAAGGCACTaGTGTGGTGGTTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLSTRRH*CGGSSI
Trigger: GATGGAGGAACCACCACAGCAGTGCCTTCTCGTCGA...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGCCCGGGCCCGCTGCTaGATGTCTGTCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLARARC*MSVFSR
Trigger: CCTGCTGAAGACAGACATGCAGCAGCGGGCCCGGGC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGGGGACGAACTTTGCTaGGCAGTGAGAAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSGDELC*AVRRKH
Trigger: GTGCTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGGAGATGTTGCGGACTaGAGCATCACGCTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWGDVAD*SITLKK
Trigger: CTTTTTCAGCGTGATGCTCCAGTCCGCAACATCTCC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTCCTGCTTGCGAATCTaGAGCTGCACGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWSCLRI*SCTISV
Trigger: GACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCGTTGGAGTTCTTCTTaGACGCGGAGAAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWRWSSS*TRRKVS
Trigger: AGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCACGCCGCAGGAGCTaGATCATCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCPRRRS*IISCFS
Trigger: AGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGG...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTGGAGCTTTTGCAGCTaGTTTGCATTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVWSFCS*FALAWY
Trigger: GTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCACGTTCAACCGCAATaGAACGGTAACGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLHVQPQ*NGNGCL
Trigger: CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGACACGATGCAAATCCTaGAGGCGTCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWTRCKS*RRLWTS
Trigger: AGAAGTCCAAAGACGCCTTCAGGATTTGCATCGTGT...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTCGAAGAAACGCAGTTaGGCCTTTTCTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVSKKRS*AFSNSS
Trigger: CGAGGAGTTAGAAAAGGCTCAACTGCGTTTCTTCGA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGTGATTTTTCAGCACTaGCTGGCAAGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWVIFQH*LASWKK
Trigger: CTTCTTCCAGCTTGCCAGTCAGTGCTGAAAAATCAC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354981.7
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGAGGGGAACCAGGTGTaGTTTTTCAGCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLEGNQV*FFSTDW
Trigger: CCAGTCAGTGCTGAAAAATCACACCTGGTTCCCCTC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354981.7
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCAACTTTGCTGCGCAGTaGGAAGGAAGCACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLNFAAQ*EGSTVG
Trigger: TCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTT...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGTGGAGGGGAGATGTTaGGGACTGGAGCATCACGCT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKVEGRC*GLEHHA
Trigger: AGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCAC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGTTCATCCCAGTCGCTaGGGTGGTCCGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLVHPSR*GGPVDI
Trigger: AATATCAACCGGACCACCGCAGCGACTGGGATGAAC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCTCCGGTGGCATCTaGACGCTCACTTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQGSGGI*TLTSGK
Trigger: CTTGCCGGAAGTGAGCGTGCAGATGCCACCGGAGCC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATCCAGCGCCTCTCTCTaGTGCTTCTCTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKSSASL*CFSLDS
Trigger: GGAGTCCAGAGAGAAGCAGCAGAGAGAGGCGCTGGA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGAGACTGGCAAGTTTCTaGCTCTGCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVRLASF*LCSSIS
Trigger: GGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCT...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTTCTCCAGGGCTTCCTaGTCAGCCTCCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQFSRAS*SASRLA
Trigger: GGCTAGCCTGGAGGCTGAGCAGGAAGCCCTGGAGAA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCAACCACATCTATCTTaGCACAGGGGACGAACTTTG +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVQPHLS*HRGRTL
Trigger: CAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGTCCTTCAGGTCATCTaGATTTGCGCCCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLVLQVI*ICAQRA
Trigger: CGCTCTTTGGGCGCAAATCCAGATGACCTGAAGGAC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCCATTCACAGAGCACTaGGACCCACTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCPFTEH*DPLRGI
Trigger: GATACCCCTGAGTGGGTCCCAGTGCTCTGTGAATGG...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGCAGCTGGTTTGCATTaGCCTGGTACTGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLAAGLH*PGTVQA
Trigger: AGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGAACGACTGTAACGCCTaGATACAGTCCATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWNDCNA*IQSMSH
Trigger: ATGAGACATGGACTGTATTCAGGCGTTACAGTCGTT...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCCAAGTGGATCTTACTaGCGGTTTCACATGGCATTT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWPSGSY*RFHMAF
Trigger: AAATGCCATGTGAAACCGTCAGTAAGATCCACTTGG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCAATCCCTTCTTTCCTaGGGGCTAGAGTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWQSLLS*GLEFVL
Trigger: AAGAACAAACTCTAGCCCTCAGGAAAGAAGGGATTG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGAGTGTTGTCTAAGCTaGGAGGGCCTCTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSECCLS*EGLCQE
Trigger: TTCTTGACAGAGGCCCTCTCAGCTTAGACAACACTC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCTCACTTTTTCCTCCTaGCGTGCAATGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSLTFSS*RAMLAV
Trigger: CACTGCCAACATTGCACGTCAGGAGGAAAAAGTGAG...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGTGGAGGGGAGATGTTaGGGACTGGAGCATCACGCT +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQVEGRC*GLEHHA
Trigger: AGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCAC...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGGCCACCTTGACCGATaGCATCGCTCATCCCGAACC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLGHLDR*HRSSRT
Trigger: GGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGGGCCTTCTTTGGGATaGTCACGGACTCTCAAATTG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLGPSLG*SRTLKL
Trigger: CAATTTGAGAGTCCGTGAGCATCCCAAAGAAGGCCC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGTTCATCCCAGTCGCTaGGGTGGTCCGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCVHPSR*GGPVDI
Trigger: AATATCAACCGGACCACCGCAGCGACTGGGATGAAC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGGAGGGATTCCCGAATaGCTTCCAGGTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKGGIPE*LPGPSS
Trigger: AGAAGAGGGACCTGGAAGGCATTCGGGAATCCCTCC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGTGGCTTGGAGCTTTTaGAGCTGGTTTGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCVAWSF*SWFALA
Trigger: GGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCAC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGCTCTTCAATCTCCATaGCCAGGGTGGAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISALQSP*PGWSAS
Trigger: AGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTGGAACGGTAACGGCTaGCTGTCAGGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQWNGNG*LSGPHQ
Trigger: CTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCACAGGGGACGAACTTTaGTGCGCAGTGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCTGDEL*CAVRRK
Trigger: CTTCCTTCTCACTGCGCAGCAAAGTTCGTCCCCTGT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCATAAGGGCCTTCTTTaGGATGCTCACGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSHKGLL*DAHGLS
Trigger: TGAGAGTCCGTGAGCATCCCAAAGAAGGCCCTTATG...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCTGTCTCCTTGCGCTaGGTCTCCACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSVSLR*VSTSCC
Trigger: GCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAGCTTGTTCTCGATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGTTGGAGTTCTTCTTaGACGCGGAGAAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLRWSSS*TRRKVS
Trigger: AGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGAGCTGCTCTTCCAGATaGGCCACGAGCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSCSSR*ATSMTC
Trigger: GCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGTAAGCCACCCACTTTaGGAGGTCCCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLVSHPL*EVPGWL
Trigger: CAGCCAGCCTGGGACCTCCCAAAGTGGGTGGCTTAC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCACACGATGCAAATCCTaGAGGCGTCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSTRCKS*RRLWTS
Trigger: AGAAGTCCAAAGACGCCTTCAGGATTTGCATCGTGT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTATTTGCAGCATCCTaGGATAAATCAGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVVFAAS*DKSAKA
Trigger: TGCCTTAGCTGATTTATCTCAGGATGCTGCAAATAC...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWSLVNS*TLASFC
Trigger: GCAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTCGATGCCAATCAAATaGGGCAGTTCAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWSMPIK*GSSESK
Trigger: TTTGGATTCTGAACTGCCTCATTTGATTGGCATCGA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTTGCGAATCTGGAGCTaGACGATTTCTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSLRIWS*TISVSL
Trigger: CAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTTGAGGCTCTCCTCCTaGTTGCGAATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQLRLSS*LRIWSC
Trigger: GCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTGCAGCTCGATTTCCTaGTGTTCCCTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQCSSIS*CSLSLS
Trigger: GGAGAGGCTGAGGGAACAGCAGGAAATCGAGCTGCA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTGGCGTTCTTTATATTaGAGCCTGTACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSWRSLY*SLYSTG
Trigger: GCCAGTGGAGTACAGGCTGCAATATAAAGAACGCCA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTTTTCCTCCTGACGTaGAATGTTGGCAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWFFLLT*NVGSEF
Trigger: GAATTCACTGCCAACATTGCACGTCAGGAGGAAAAA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGAGGGTGGAGTGCCTCTaGAGCGCAGAATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQRVECL*SAECLL
Trigger: GAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCT...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGATGCCCAGGGTGGAGTaGCTCTGCAGCGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLMPRVE*LCSAEC
Trigger: ACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCAT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGCCCTGACTGCTCTCTaGTGCCACTGTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLALTAL*CHCSDW
Trigger: CCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAGGGC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCGACGAGAAGGCACTaGTGTGGTGGTTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSTRRH*CGGSSI
Trigger: GATGGAGGAACCACCACAGCAGTGCCTTCTCGTCGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGCAGAGGACGTAGCGTaGGATACTAATTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWAEDVA*DTNFNW
Trigger: CCAATTAAAATTAGTATCCCACGCTACGTCCTCTGC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGCAGCGTTTTCAGTCTaGCTATTTCAGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCAAFSV*LFQLAA
Trigger: AGCTGCGAGCTGAAATAGCCAGACTGAAAACGCTGC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCATACTTAAAGCTGTaGGGGAGTCTAAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLPYLKL*GSLRGQ
Trigger: TTGCCCTCTTAGACTCCCCCACAGCTTTAAGTATGG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCCATACTTAAAGCTGTaGGGGAGTCTAAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSPYLKL*GSLRGQ
Trigger: TTGCCCTCTTAGACTCCCCCACAGCTTTAAGTATGG...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTCCTGCTTGCGAATCTaGAGCTGCACGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCSCLRI*SCTISV
Trigger: GACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGCTTGTTCTCGATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCCTCCAGGCTAGCCTaGAGCCCTGACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTASRLA*SPDCSL
Trigger: CAGAGAGCAGTCAGGGCTCCAGGCTAGCCTGGAGGC...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTCAGTCCCACTTTGTTaGTGTGGAGGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISSVPLC*CGGEML
Trigger: CAACATCTCCCCTCCACATCAACAAAGTGGGACTGA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATCAGTCCCACTTTGTTaGTGTGGAGGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKSVPLC*CGGEML
Trigger: CAACATCTCCCCTCCACATCAACAAAGTGGGACTGA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCAAAGACTCCTTTCTTaGAGAATGGTGAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVQRLLS*RMVKTH
Trigger: GTGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTACCCTCACGGCCACCTTaGCCGATGCCATCGCTCATC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVPSRPP*PMPSLI
Trigger: GATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGG...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCAAGAAAAGTCATAGGTaGAGGTCTTGGTCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLKKSHR*RSWSVL
Trigger: GAGAACGGACCAAGACCTTCACCTATGACTTTTCTT...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGCATGAGACCTGCTACTaGCGTCGTTCATCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQHETCY*RRSSQS
Trigger: CGACTGGGATGAACGACGTCAGTAGCAGGTCTCATG...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCAAGTGGATCTTACTaGCGGTTTCACATGGCATTT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLPSGSY*RFHMAF
Trigger: AAATGCCATGTGAAACCGTCAGTAAGATCCACTTGG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGCAGCTAAGGCAGAAATaGCGTTCCCCAGAGTCACGA +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQQLRQK*RSPESR
Trigger: TCGTGACTCTGGGGAACGTCATTTCTGCCTTAGCTG...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCTTGCTTCATTCTGCTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVLASFC*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCAGCAGAATGAAGCAAG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCTTCCTCTTCTCCCTaGGCTTGGCGGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSSSSP*AWRLPL
Trigger: CAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAGGAAGCTGCGGCGTTTaGGGCTCTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVGSCGV*GSPPAC
Trigger: GCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCC...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCCAGGTCATCTGGATTTaGGCCCAAAGAGCGAGAAAC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISQVIWI*AQRARN
Trigger: GTTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTG...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGACCCCGTCCCGTGGCTaGTGTAGTCAAAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLTPSRG*CSQRLL
Trigger: AAGGAGTCTTTGACTACAGCAGCCACGGGACGGGGT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGCTCTTCAATCTCCATaGCCAGGGTGGAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLALQSP*PGWSAS
Trigger: AGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGGAGATGTTGCGGACTaGAGCATCACGCTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISGDVAD*SITLKK
Trigger: CTTTTTCAGCGTGATGCTCCAGTCCGCAACATCTCC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGCAGCGTTTTCAGTCTaGCTATTTCAGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISAAFSV*LFQLAA
Trigger: AGCTGCGAGCTGAAATAGCCAGACTGAAAACGCTGC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGCCATTCACAGAGCACTaGGACCCACTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLPFTEH*DPLRGI
Trigger: GATACCCCTGAGTGGGTCCCAGTGCTCTGTGAATGG...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTTGATTTAGATGTGTaGCCTCCACGATCTGAACAC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLLDLDV*PPRSEH
Trigger: GTGTTCAGATCGTGGAGGCCACACATCTAAATCAAG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTTGGCGGCTTCCTTTaGATGGTTAAAGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLLGGFL*MVKAKH
Trigger: ATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCTTCTTCCAACAGAGTTaGCAAGTGATTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLFFQQS*QVILQE
Trigger: CTCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAA...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTATTCTAACCTCTCCTaGTCCTTCTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISYSNLS*SFSRAS
Trigger: GGAAGCCCTGGAGAAGGACCAGGAGAGGTTAGAATA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354981.7
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTTTTCAGCACTGACTaGCAAGCTGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCFFSTD*QAGRSH
Trigger: GTGGCTTCTTCCAGCTTGCCAGTCAGTGCTGAAAAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354981.7
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATCAGGGAACCCACGATaGCCCAACCACATCTATCTT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKSGNPR*PNHIYL
Trigger: AAGATAGATGTGGTTGGGCCATCGTGGGTTCCCTGA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAACGACTGTAACGCCTaGATACAGTCCATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCNDCNA*IQSMSH
Trigger: ATGAGACATGGACTGTATTCAGGCGTTACAGTCGTT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGAAAACCATTTCTTGTaGAACGTAATCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWENHFL*NVIWAF
Trigger: AAAAGCCCAGATTACGTTTCACAAGAAATGGTTTTC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGCAGCTAAGGCAGAAATaGCGTTCCCCAGAGTCACGA +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQQLRQK*RSPESR
Trigger: TCGTGACTCTGGGGAACGTCATTTCTGCCTTAGCTG...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCATTTTCTCGAAATCTTaGGGCACTTCCGTGACATCT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSIFSKS*GTSVTS
Trigger: AGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAAT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAACAGAGTTGGCAAGTaGTTCTGCAGGAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISNRVGK*FCRRYC
Trigger: ACAGTACCTCCTGCAGAATCACTTGCCAACTCTGTT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTCCTGAGTCCCCAGTaGCTCCTTCTGGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISFLSPQ*LLLVSL
Trigger: TAAAGATACCAGAAGGAGGCACTGGGGACTCAGGAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTGGGTCTCCACCTCCTaGTGCATCCGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTWVSTS*CIRSSS
Trigger: TGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATTGCGAATCTGGAGCTaGACGATTTCTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKLRIWS*TISVSL
Trigger: CAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGGCTCTCCTCCTGCTTaGGAATCTGGAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTGSPPA*ESGAAR
Trigger: TCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCC...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTCTTGTCTCTTCTTCTaGAGCTCGATTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCSCLFF*SSISCC
Trigger: ACAGCAGGAAATCGAGCTGCAGAAGAAGAGACAAGA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGTGGCTTGGAGCTTTTaGAGCTGGTTTGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLVAWSF*SWFALA
Trigger: GGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCAC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGATACTAATTTTAATTaGGTCCTTCAGGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: GELPCIGARFDEKALLWWDTNFN*VLQVIW
Trigger: CCAGATGACCTGAAGGACCCAATTAAAATTAGTATC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGCAAGATCAACCAAGTaGATCTTACTGACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLARSTK*ILLTVS
Trigger: TGAAACCGTCAGTAAGATCCACTTGGTTGATCTTGC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGCGGCTTCCTTTGGATaGTTAAAGCGAAACATATTG +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLAASFG*LKRNIL
Trigger: CAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTTCTTTGAGTCGTTaGAGTTCTTCTTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISSSLSR*SSSWTR
Trigger: CCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCCCACGCCGCAGGAGCTaGATCATCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTPRRRS*IISCFS
Trigger: AGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGG...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCAGCCTGTACTCCACTaGCTTTATTTTCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: LPCIGARFDEKALLWWFLQPVLH*LYFLEI
Trigger: GATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTG...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATGGTTTGCATTGGCCTaGTACTGTGCAAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKWFALA*YCASCS
Trigger: AGAACAGCTTGCACAGTACCAGGCCAATGCAAACCA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGCAGCTGGTTTGCATTaGCCTGGTACTGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQAAGLH*PGTVQA
Trigger: AGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTGGAGCTTTTGCAGCTaGTTTGCATTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQWSFCS*FALAWY
Trigger: GTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCAATTCAAAGGTGGCTTaGAGCTTTTGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSNSKVA*SFCSWF
Trigger: AAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCAGGGAACCCACGATaGCCCAACCACATCTATCTT +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSGNPR*PNHIYL
Trigger: AAGATAGATGTGGTTGGGCCATCGTGGGTTCCCTGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCCAAAGACTCCTTTCTTaGAGAATGGTGAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSQRLLS*RMVKTH
Trigger: GTGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTG...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAAGAAAAGTCATAGGTaGAGGTCTTGGTCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISKKSHR*RSWSVL
Trigger: GAGAACGGACCAAGACCTTCACCTATGACTTTTCTT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCCTGTGCCGAGGGTTTTaGAAACCATTTCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCLCRGF*KPFLVK
Trigger: TTTCACAAGAAATGGTTTTCAAAACCCTCGGCACAG...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTTCATTTATCCGACTaGAGAGTCCTTCACAGATCC +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCFHLSD*RVLHRS
Trigger: GGATCTGTGAAGGACTCTTCAGTCGGATAAATGAAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAACAGTTCAGCCTTGTCTaGTTTCTGCTTTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKQFSLV*FLLFLH
Trigger: ATGGAGGAAAAGCAGAAATCAGACAAGGCTGAACTG...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGCTCACTTTTTCCTCCTaGCGTGCAATGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQLTFSS*RAMLAV
Trigger: CACTGCCAACATTGCACGTCAGGAGGAAAAAGTGAG...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGATCCTTCATCGTGTCTaGAGATGTACTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQILHRV*RCTAAF
Trigger: GAAGGCTGCAGTACATCTGCAGACACGATGAAGGAT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCGCCTTGTCTGATTTCTaGTTTTCCTCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSALSDF*FSSISS
Trigger: AGAAGAAATGGAGGAAAAGCAGAAATCAGACAAGGC...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTATCCAGCGCCTCTCTCTaGTGCTTCTCTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSSASL*CFSLDS
Trigger: GGAGTCCAGAGAGAAGCAGCAGAGAGAGGCGCTGGA...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAATGCCCAGGGTGGAGTaGCTCTGCAGCGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVMPRVE*LCSAEC
Trigger: ACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCAT...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GGAALHRSPLRREGTAVVLVYVE*CHCEVS
Trigger: AGAAACTTCACAATGGCACCATTCAACGTAAACTAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGCATAAGGGCCTTCTTTaGGATGCTCACGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLHKGLL*DAHGLS
Trigger: TGAGAGTCCGTGAGCATCCCAAAGAAGGCCCTTATG...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGCAAGATCAACCAAGTaGATCTTACTGACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCARSTK*ILLTVS
Trigger: TGAAACCGTCAGTAAGATCCACTTGGTTGATCTTGC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAACAATATCTTGCTCCGTaGAAGCATCGTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKQYLAP*KHRLYQ
Trigger: TTGGTAGAGACGATGCTTCCACGGAGCAAGATATTG...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAACTTGGCGGCTTCCTTTaGATGGTTAAAGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKLGGFL*MVKAKH
Trigger: ATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAG...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAAGCTGCTCTTCCAGATaGGCCACGAGCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSCSSR*ATSMTC
Trigger: GCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCT...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGAGGTACTGTAGCTaGCGTTCTTTATATTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISRRYCS*RSLYCS
Trigger: GCTGCAATATAAAGAACGCCAGCTACAGTACCTCCT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTCTTCCAACAGAGTTaGCAAGTGATTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISFFQQS*QVILQE
Trigger: CTCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGAGAAGGAAGCACTGTaGGAAAAGGCCACGTTCAAC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLEKEAL*EKATFN
Trigger: GTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAAGGTATTTCTCTAAGTaGCTTCGTCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKRYFSK*LRLSAI
Trigger: GATTGCTGAGAGACGAAGTCACTTAGAGAAATACCT...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCATGGTGAAGATGGCATaGGACCTGCTACTGACGTCG +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTMVKMA*DLLLTS
Trigger: CGACGTCAGTAGCAGGTCTCATGCCATCTTCACCAT...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGAGAATCACAGCACCTTaGTTTAGATGTGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLRITAP*FRCVAS
Trigger: GGAGGCCACACATCTAAATCAAGGTGCTGTGATTCT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTATCTTCCTCTTCTCCCTaGGCTTGGCGGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSSSSP*AWRLPL
Trigger: CAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGA...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGAACAGAGTTGGCAAGTaGTTCTGCAGGAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQNRVGK*FCRRYC
Trigger: ACAGTACCTCCTGCAGAATCACTTGCCAACTCTGTT...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAAAGAGGAAACCAGATaGAAGTCATTTAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCKEETR*KSFKGG
Trigger: ACCACCCTTAAATGACTTTCATCTGGTTTCCTCTTT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGATCCTTCATCGTGTCTaGAGATGTACTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQILHRV*RCTAAF
Trigger: GAAGGCTGCAGTACATCTGCAGACACGATGAAGGAT...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCAACTTGCTTCTTCTTTaGAAGAGTATTTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSNLLLL*KSICSI
Trigger: GATGCTGCAAATACTCTTGCAAAGAAGAAGCAAGTT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGTTATACAACATGACTaGAGACAGGTTCTCACGGGA +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQVIQHD*RQVLTG
Trigger: TCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCACTAGCTTGACAAGCTaGCTTCTCTTGAATTCGAAG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISTSLTS*LLLNSK
Trigger: CTTCGAATTCAAGAGAAGGCAGCTTGTCAAGCTAGT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTTTTCCTCCTGACGTaGAATGTTGGCAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISFFLLT*NVGSEF
Trigger: GAATTCACTGCCAACATTGCACGTCAGGAGGAAAAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCCCCACTTTGTTGATGTaGAGGGGAGATGTTGCGGAC +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTPTLLM*RGDVAD
Trigger: GTCCGCAACATCTCCCCTCCACATCAACAAAGTGGG...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAAAGCTTCATCCCATCTaGTGGTTTCATTTATCCGAC +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKKLHPI*WFHLSD
Trigger: GTCGGATAAATGAAACCACCAGATGGGATGAAGCTT...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGCAATATCTTGCTCCGTaGAAGCATCGTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQQYLAP*KHRLYQ
Trigger: TTGGTAGAGACGATGCTTCCACGGAGCAAGATATTG...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGCTTGATTTAGATGTGTaGCCTCCACGATCTGAACAC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQLDLDV*PPRSEH
Trigger: GTGTTCAGATCGTGGAGGCCACACATCTAAATCAAG...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAACAGCCTGTACTCCACTaGCTTTATTTTCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKQPVLH*LYFLEI
Trigger: GATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTG...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGTGGTTTGCATTGGCCTaGTACTGTGCAAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQWFALA*YCASCS
Trigger: AGAACAGCTTGCACAGTACCAGGCCAATGCAAACCA...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTACACGTTCAACCGCAATaGAACGGTAACGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVHVQPQ*NGNGCL
Trigger: CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTTTCATTTATCCGACTaGAGAGTCCTTCACAGATCC +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQFHLSD*RVLHRS
Trigger: GGATCTGTGAAGGACTCTTCAGTCGGATAAATGAAA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAATGGTGAAGATGGCATaGGACCTGCTACTGACGTCG +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVMVKMA*DLLLTS
Trigger: CGACGTCAGTAGCAGGTCTCATGCCATCTTCACCAT...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGAATCAAATTTAGCCTaGGTGAACTTGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISESNLA*VNLMVK
Trigger: CTTCACCATCAAGTTCACTCAGGCTAAATTTGATTC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGAATCAAATTTAGCCTaGGTGAACTTGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKESNLA*VNLMVK
Trigger: CTTCACCATCAAGTTCACTCAGGCTAAATTTGATTC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGCAATCCCTTCTTTCCTaGGGGCTAGAGTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQQSLLS*GLEFVL
Trigger: AAGAACAAACTCTAGCCCTCAGGAAAGAAGGGATTG...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTCCAGTTTGCCCATATaGAAAGACACAAGCATTATA +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCSSLPI*KDTSII
Trigger: TATAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGGGCCTTCTTTGGGATaGTCACGGACTCTCAAATTG +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTGPSLG*SRTLKL
Trigger: CAATTTGAGAGTCCGTGAGCATCCCAAAGAAGGCCC...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGCTCCCGGCCGGACCTaGAGTTCCGCGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEAPGRT*SSAAAP
Trigger: TGGGGCTGCCGCGGAACTCCAGGTCCGGCCGGGAGC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCACTGACGGTTTCACATaGCATTTCAGAATCAAATTT +
Preference number: 4 (lower is better)
Translates to: CPASEPASTRRHCCGGSSTDGFT*HFRIKF
Trigger: AAATTTGATTCTGAAATGCCATGTGAAACCGTCAGT...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGAGAAGGAAGCACTGTaGGAAAAGGCCACGTTCAAC +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTEKEAL*EKATFN
Trigger: GTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTC...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGAGGTATTTCTCTAAGTaGCTTCGTCTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLRYFSK*LRLSAI
Trigger: GATTGCTGAGAGACGAAGTCACTTAGAGAAATACCT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGCTGTGCCGAGGGTTTTaGAAACCATTTCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQLCRGF*KPFLVK
Trigger: TTTCACAAGAAATGGTTTTCAAAACCCTCGGCACAG...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCGATGCCAATCAAATaGGGCAGTTCAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSMPIK*GSSESK
Trigger: TTTGGATTCTGAACTGCCTCATTTGATTGGCATCGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCACGAGTATATTTTGGTaGAAGAGGAAACCAGATGAA +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISTSIFW*KRKPDE
Trigger: TTCATCTGGTTTCCTCTTTCACCAAAATATACTCGT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAACTTGCTTCTTCTTTaGAAGAGTATTTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: ATFNRNGTVTAACQGHISNLLLL*KSICSI
Trigger: GATGCTGCAAATACTCTTGCAAAGAAGAAGCAAGTT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCLVYVE*CHCEVS
Trigger: AGAAACTTCACAATGGCACCATTCAACGTAAACTAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGCAGAGGACGTAGCGTaGGATACTAATTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLAEDVA*DTNFNW
Trigger: CCAATTAAAATTAGTATCCCACGCTACGTCCTCTGC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGTGAAAACTCACAAATaGTATGTTTCGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKVKTHK*YVSRES
Trigger: TGACTCTCTCGAAACATACCATTTGTGAGTTTTCAC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGCGGCTTCCTTTGGATaGTTAAAGCGAAACATATTG +
Preference number: 4 (lower is better)
Translates to: LWEKATFNRNGTVTAACQAASFG*LKRNIL
Trigger: CAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGAATTCAAAGGTGGCTTaGAGCTTTTGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLNSKVA*SFCSWF
Trigger: AAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGTCTCCTCTCCAGCCTaGCCAGGGCCCGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSVSSPA*PGPAPA
Trigger: CGCTGGAGCGGGCCCTGGCCAGGCTGGAGAGGAGAC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTATCGAAGAAACGCAGTTaGGCCTTTTCTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSKKRS*AFSNSS
Trigger: CGAGGAGTTAGAAAAGGCTCAACTGCGTTTCTTCGA...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGAAAGAGGAAACCAGATaGAAGTCATTTAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLKEETR*KSFKGG
Trigger: ACCACCCTTAAATGACTTTCATCTGGTTTCCTCTTT...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGCCTTGTCTGATTTCTaGTTTTCCTCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLALSDF*FSSISS
Trigger: AGAAGAAATGGAGGAAAAGCAGAAATCAGACAAGGC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTCTTGTCTCTTCTTCTaGAGCTCGATTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTSCLFF*SSISCC
Trigger: ACAGCAGGAAATCGAGCTGCAGAAGAAGAGACAAGA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGTGAAAACTCACAAATaGTATGTTTCGAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQVKTHK*YVSRES
Trigger: TGACTCTCTCGAAACATACCATTTGTGAGTTTTCAC...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGGTCGCCGGCGACGCTaGCTACTCAGATCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSGRRRR*LLRSRL
Trigger: GAGCCGCGATCTGAGTAGCCAGCGTCGCCGGCGACC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCAGGAGGTACTGTAGCTaGCGTTCTTTATATTGCAGC +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTRRYCS*RSLYCS
Trigger: GCTGCAATATAAAGAACGCCAGCTACAGTACCTCCT...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCGCCGCACCCTCTGCTaGCCTCAGGCTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRRTLC*PQAPCS
Trigger: GCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTACAGTTCAGCCTTGTCTaGTTTCTGCTTTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVQFSLV*FLLFLH
Trigger: ATGGAGGAAAAGCAGAAATCAGACAAGGCTGAACTG...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTACAAGCTGCCTTCTCTTaGATTCGAAGAAACGCAGTT +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVQAAFS*IRRNAV
Trigger: AACTGCGTTTCTTCGAATTCAAGAGAAGGCAGCTTG...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCCAGTTTGCCCATATaGAAAGACACAAGCATTATA +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSSLPI*KDTSII
Trigger: TATAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAGTTATACAACATGACTaGAGACAGGTTCTCACGGGA +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVVIQHD*RQVLTG
Trigger: TCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGACTGACGGTTTCACATaGCATTTCAGAATCAAATTT +
Preference number: 4 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQTDGFT*HFRIKF
Trigger: AAATTTGATTCTGAAATGCCATGTGAAACCGTCAGT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCCCGGTGGCTCCGGTaGCATCTGCACGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPRWLR*HLHAHF
Trigger: GAAGTGAGCGTGCAGATGCCACCGGAGCCACCGGGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTATCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSLVNS*TLASFC
Trigger: GCAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGA...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGGCTCCGGTGGCATCTaGACGCTCACTTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFGSGGI*TLTSGK
Trigger: CTTGCCGGAAGTGAGCGTGCAGATGCCACCGGAGCC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCAAAGGTCATCATCGATaGCAATCAAATGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTKGHHR*QSNEAV
Trigger: AACTGCCTCATTTGATTGGCATCGATGATGACCTTT...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGACGCCAGTACGCTCTaGGGGGCACTGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFDASTL*GALQDA
Trigger: AGCATCCTGCAGTGCCCCGCAGAGCGTACTGGCGTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCTTCGCTCTCGCTGCTaGCAACCCGAGCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELRSRC*QPELPE
Trigger: CTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTTTCCCTGCGATTCATaGGCCGGACCCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIFPCDS*AGPSRP
Trigger: TGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAAAGCTTCATCCCATCTaGTGGTTTCATTTATCCGAC +
Preference number: 4 (lower is better)
Translates to: SEKEALWEKATFNRNGTVKLHPI*WFHLSD
Trigger: GTCGGATAAATGAAACCACCAGATGGGATGAAGCTT...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTATTTGTCCATTCCTTaGTCAATTCTTGAACTCTTG +
Preference number: 4 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLYLSIP*SILELL
Trigger: CAAGAGTTCAAGAATTGACCAAGGAATGGACAAATA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGCCTCCAGGCTAGCCTaGAGCCCTGACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFASRLA*SPDCSL
Trigger: CAGAGAGCAGTCAGGGCTCCAGGCTAGCCTGGAGGC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCCCTCACGGCCACCTTaGCCGATGCCATCGCTCATC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLPSRPP*PMPSLI
Trigger: GATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGGAAGCTGCGGCGTTTaGGGCTCTCCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLGSCGV*GSPPAC
Trigger: GCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCACGAGTATATTTTGGTaGAAGAGGAAACCAGATGAA +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTTSIFW*KRKPDE
Trigger: TTCATCTGGTTTCCTCTTTCACCAAAATATACTCGT...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATGCTGGAGCAAGGGATaGTTAGCGCAGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSCWSKG*LAQAAA
Trigger: TGCCGCTGCCTGCGCTAATCATCCCTTGCTCCAGCA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTGCTGGAGCAAGGGATaGTTAGCGCAGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFCWSKG*LAQAAA
Trigger: TGCCGCTGCCTGCGCTAATCATCCCTTGCTCCAGCA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGTTTACGTTGAATGGTaGCATTGTGAAGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTVYVEW*HCEVSH
Trigger: ATGAGAAACTTCACAATGGCACCATTCAACGTAAAC...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGGCCACCTTGACCGATaGCATCGCTCATCCCGAACC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFGHLDR*HRSSRT
Trigger: GGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCCAAGTCCTTTTCCCTaGGATTCATGGGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIPSPFP*DSWAGP
Trigger: GGGTCCGGCCCATGAATCGCAGGGAAAAGGACTTGG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGCCCTGACTGCTCTCTaGTGCCACTGTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIALTAL*CHCSDW
Trigger: CCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAGGGC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTCTCCAGGGCTTCCTaGTCAGCCTCCAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEFSRAS*SASRLA
Trigger: GGCTAGCCTGGAGGCTGAGCAGGAAGCCCTGGAGAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAGAGCACCTTGCCTTaGCTGGCCTGCTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQSTLP*LACLPP
Trigger: CGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACGCTCTGCGGGGCACTaGAGGATGCTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSRSAGH*RMLSPH
Trigger: ATGAGGAGAGAGCATCCTGCAGTGCCCCGCAGAGCG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAGCTTCGCTCTCGCTaGTGCCAACCCGAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQLRSR*CQPELP
Trigger: CGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTGGCCTCAGGCTCCCTaGAGCTTCGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLWPQAP*SFALAA
Trigger: AGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTTTCCCTGCGATTCATaGGCCGGACCCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFFPCDS*AGPSRP
Trigger: TGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATCTGTCTCCTTGCGCTaGGTCTCCACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSVSLR*VSTSCC
Trigger: GCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAACGAATGTTGTTACCTaGGAGGGGAGCCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSTNVVT*EGSPLG
Trigger: CCCGAGGGGGCTCCCCTCCCAGGTAACAACATTCGT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGGTCCGTTCTCTTCCTaGGTCCCCAGTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLGPFSS*VPSASF
Trigger: GAAGGAGGCACTGGGGACTCAGGAAGAGAACGGACC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACGGTCATGGACAAGCTaGAGGAGGACAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSRSWTS*RRTEGH
Trigger: GTGGCCTTCTGTCCTCCTTCAGCTTGTCCATGACCG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACAAGCCTGGCTTGGCTaGTCACCTTTGTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSQAWLG*SPLCQP
Trigger: AGGCTGGCACAAAGGTGATCAGCCAAGCCAGGCTTG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAGCAAACACGCTGGTTaGGGGTCAGGTGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSKHAG*GSGAVQ
Trigger: CTGCACAGCACCTGACCCTCAACCAGCGTGTTTGCT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCAAGTCCTTTTCCCTaGGATTCATGGGCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPSPFP*DSWAGP
Trigger: GGGTCCGGCCCATGAATCGCAGGGAAAAGGACTTGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTGGGTCTCCACCTCCTaGTGCATCCGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFWVSTS*CIRSSS
Trigger: TGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGGCTCTCCTCCTGCTTaGGAATCTGGAGCTGCACGA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEGSPPA*ESGAAR
Trigger: TCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTTGAGGCTCTCCTCCTaGTTGCGAATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWILRLSS*LRIWSC
Trigger: GCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTGCTTCTCTCGGAGCTaGTCTTCCAGATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFCFSRS*SSRWAT
Trigger: CGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGGAGGGATTCCCGAATaGCTTCCAGGTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIGGIPE*LPGPSS
Trigger: AGAAGAGGGACCTGGAAGGCATTCGGGAATCCCTCC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAGGGTGGAGTGCCTCTaGAGCGCAGAATGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFRVECL*SAECLL
Trigger: GAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAATGCCCAGGGTGGAGTaGCTCTGCAGCGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSMPRVE*LCSAEC
Trigger: ACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCAT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGCCCTGACTGCTCTCTaGTGCCACTGTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSALTAL*CHCSDW
Trigger: CCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAGGGC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCACGCCGCAGGAGCTaGATCATCTCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPRRRS*IISCFS
Trigger: AGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACATGAGACCTGCTACTaGCGTCGTTCATCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSHETCY*RRSSQS
Trigger: CGACTGGGATGAACGACGTCAGTAGCAGGTCTCATG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTCTTCCTCTTCTCCCTaGGCTTGGCGGCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFSSSSP*AWRLPL
Trigger: CAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAACTTTGCTGCGCAGTaGGAAGGAAGCACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWINFAAQ*EGSTVG
Trigger: TCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAGTTGTTTTAGGGCCTaGGACGCTCCACAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFSCFRA*DAPQHG
Trigger: CCCATGCTGTGGAGCGTCTCAGGCCCTAAAACAACT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTGAGGCTCTCCTCCTaGTTGCGAATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELRLSS*LRIWSC
Trigger: GCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTGCAGCTCGATTTCCTaGTGTTCCCTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTECSSIS*CSLSLS
Trigger: GGAGAGGCTGAGGGAACAGCAGGAAATCGAGCTGCA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGGAGGGATTCCCGAATaGCTTCCAGGTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEGGIPE*LPGPSS
Trigger: AGAAGAGGGACCTGGAAGGCATTCGGGAATCCCTCC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCCAGCGCCTCTCTCTaGTGCTTCTCTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSSASL*CFSLDS
Trigger: GGAGTCCAGAGAGAAGCAGCAGAGAGAGGCGCTGGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCGGGGCACTGCAGGATaGTCTCTCCTCATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFRGTAG*SLLMGN
Trigger: ATTTCCCATGAGGAGAGAGCATCCTGCAGTGCCCCG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTGGTTGAGGGTCAGGTaGTGTGCAGGCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLWLRVR*CAGSNS
Trigger: GCTGTTGCTGCCTGCACAGCACCTGACCCTCAACCA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCCATTCACAGAGCACTaGGACCCACTCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEPFTEH*DPLRGI
Trigger: GATACCCCTGAGTGGGTCCCAGTGCTCTGTGAATGG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGCTGCTCTTCCAGATaGGCCACGAGCATGACCTGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSCSSR*ATSMTC
Trigger: GCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGACTGGCACTGGTCATaGCCAGAGTCACCCATGACT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSDWHWS*PESPMT
Trigger: AGTCATGGGTGACTCTGGCCATGACCAGTGCCAGTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGACTGGCACTGGTCATaGCCAGAGTCACCCATGACT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEDWHWS*PESPMT
Trigger: AGTCATGGGTGACTCTGGCCATGACCAGTGCCAGTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACTAGCGACTGGCACTaGTCATGGCCAGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTSDWH*SWPESP
Trigger: GGGTGACTCTGGCCATGACCAGTGCCAGTCGCTAGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAGAAGGACTAGCGACTaGCACTGGTCATGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSRRTSD*HWSWPE
Trigger: CTCTGGCCATGACCAGTGCCAGTCGCTAGTCCTTCT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAGAAGGACTAGCGACTaGCACTGGTCATGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTERRTSD*HWSWPE
Trigger: CTCTGGCCATGACCAGTGCCAGTCGCTAGTCCTTCT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAGACGCTCCACAGCATaGGATGATCCCAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFRRSTA*DDPSGR
Trigger: ACGACCACTGGGATCATCCCATGCTGTGGAGCGTCT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCCACAAGCCTGGCTTaGCTGATCACCTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPTSLA*LITFVP
Trigger: TGGCACAAAGGTGATCAGCCAAGCCAGGCTTGTGGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCAGCTAAGGCAGAAATaGCGTTCCCCAGAGTCACGA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFQLRQK*RSPESR
Trigger: TCGTGACTCTGGGGAACGTCATTTCTGCCTTAGCTG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCGGGGTTATACAACATaGCTGCAGACAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIRGYTT*LQTGSH
Trigger: GTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGAGTGTTGTCTAAGCTaGGAGGGCCTCTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIECCLS*EGLCQE
Trigger: TTCTTGACAGAGGCCCTCTCAGCTTAGACAACACTC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGAGGGGAACCAGGTGTaGTTTTTCAGCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEEGNQV*FFSTDW
Trigger: CCAGTCAGTGCTGAAAAATCACACCTGGTTCCCCTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTACATTTGGGGCTTCCTaGAGGTGCTCAGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFTFGAS*RCSGGL
Trigger: TAGTCCACCTGAGCACCTTCAGGAAGCCCCAAATGT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGAATACCTCGGGTACTaGGGACTGATCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLEYLGY*GLIPLL
Trigger: CAGCAGAGGGATCAGTCCTCAGTACCCGAGGTATTC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTCAAGGCGAAAAACTaGGCTTGGCGAGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFKAKN*AWRGTW
Trigger: CCAGGTTCCTCGCCAAGCTCAGTTTTTCGCCTTGAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGCTCTTCAATCTCCATaGCCAGGGTGGAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLALQSP*PGWSAS
Trigger: AGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACTGACTGCTCTCTGCTaGCACTGTTCAGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLTALC*HCSDWQ
Trigger: TTGCCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGAGCAGAAGACCCTCTaGAGAGCTCAGGAATCGAAC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSEQKTL*RAQESN
Trigger: GTTCGATTCCTGAGCTCTGCAGAGGGTCTTCTGCTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAGCTTGTTCTCGATGTaGAAGCTGCGGCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSLFSM*KLRRLR
Trigger: CCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTGTCAGTGGCATCTCTaGGCAGAAGCGGGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFCQWHL*AEAGQD
Trigger: ATCTTGACCCGCTTCTGCCCAGAGATGCCACTGACA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAGGAGCAAACACGCTaGTTGAGGGTCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQEQTR*LRVRCC
Trigger: ACAGCACCTGACCCTCAACCAGCGTGTTTGCTCCTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTATGGTGAAGATGGCATaGGACCTGCTACTGACGTCG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLMVKMA*DLLLTS
Trigger: CGACGTCAGTAGCAGGTCTCATGCCATCTTCACCAT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAGAATCACAGCACCTTaGTTTAGATGTGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIRITAP*FRCVAS
Trigger: GGAGGCCACACATCTAAATCAAGGTGCTGTGATTCT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGAGTGTTGTCTAAGCTaGGAGGGCCTCTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEECCLS*EGLCQE
Trigger: TTCTTGACAGAGGCCCTCTCAGCTTAGACAACACTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGGCCAGAGTCACCCATaGCTTTCACTGTTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEGQSHP*LSLLCR
Trigger: TCTACACAACAGTGAAAGTCATGGGTGACTCTGGCC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACATTTGGGGCTTCCTaGAGGTGCTCAGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTFGAS*RCSGGL
Trigger: TAGTCCACCTGAGCACCTTCAGGAAGCCCCAAATGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGATACAATGGGGTGGTaGACAACTGGACATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSDTMGW*TTGHLG
Trigger: CCCCAAATGTCCAGTTGTTCACCACCCCATTGTATC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGAAATGGCAGGCTTCTaGCGAATGTTGTTACCTGGG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFEMAGF*RMLLPG
Trigger: CCCAGGTAACAACATTCGTCAGAAGCCTGCCATTTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCGAGCTTCCGGAGAATaGGATTCTGTTGACTGCATG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTERASGE*DSVDCM
Trigger: CATGCAGTCAACAGAATCTCATTCTCCGGAAGCTCG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCCACCAAAGCCAATCTaGATCTCCTGTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFPPKPI*ISCRPE
Trigger: CTCTGGTCTACAGGAGATTCAGATTGGCTTTGGTGG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTTCCTGAGTCCCCAGTaGCTCCTTCTGGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIFLSPQ*LLLVSL
Trigger: TAAAGATACCAGAAGGAGGCACTGGGGACTCAGGAA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGGGCCTTCTTTGGGATaGTCACGGACTCTCAAATTG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFGPSLG*SRTLKL
Trigger: CAATTTGAGAGTCCGTGAGCATCCCAAAGAAGGCCC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTTCATCCCAGTCGCTaGGGTGGTCCGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVHPSR*GGPVDI
Trigger: AATATCAACCGGACCACCGCAGCGACTGGGATGAAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTGGCGTTCTTTATATTaGAGCCTGTACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIWRSLY*SLYSTG
Trigger: GCCAGTGGAGTACAGGCTGCAATATAAAGAACGCCA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCTTTTGCAGCTGGTTTaGATTGGCCTGGTACTGTGC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELLQLV*IGLVLC
Trigger: GCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTGGCTTGGAGCTTTTaGAGCTGGTTTGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVAWSF*SWFALA
Trigger: GGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAGACTGGCAAGTTTCTaGCTCTGCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIRLASF*LCSSIS
Trigger: GGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCAACCACATCTATCTTaGCACAGGGGACGAACTTTG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIQPHLS*HRGRTL
Trigger: CAAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTTCCAGACCTCAGGTaGGACATTCTGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEFPDLR*DILTAL
Trigger: CAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGCAGCGTTTTCAGTCTaGCTATTTCAGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEAAFSV*LFQLAA
Trigger: AGCTGCGAGCTGAAATAGCCAGACTGAAAACGCTGC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTCCTGCTTGCGAATCTaGAGCTGCACGATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFSCLRI*SCTISV
Trigger: GACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAGTTCTTTGAGTCGTTaGAGTTCTTCTTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWISSLSR*SSSWTR
Trigger: CCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGCAGCTGGTTTGCATTaGCCTGGTACTGTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLAAGLH*PGTVQA
Trigger: AGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTATTCTAACCTCTCCTaGTCCTTCTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFYSNLS*SFSRAS
Trigger: GGAAGCCCTGGAGAAGGACCAGGAGAGGTTAGAATA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCTGAAGGTGCTCAGGTaGACTATTTCTGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELKVLR*TISGTH
Trigger: GTGGGTTCCAGAAATAGTCCACCTGAGCACCTTCAG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGAACAACTGGACATTTaGGGCTTCCTGAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFEQLDI*GFLKVL
Trigger: GAGCACCTTCAGGAAGCCCCAAATGTCCAGTTGTTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGAACAACTGGACATTTaGGGCTTCCTGAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSEQLDI*GFLKVL
Trigger: GAGCACCTTCAGGAAGCCCCAAATGTCCAGTTGTTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCGGGGTTATACAACATaGCTGCAGACAGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRGYTT*LQTGSH
Trigger: GTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTCGAAGAAACGCAGTTaGGCCTTTTCTAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTESKKRS*AFSNSS
Trigger: CGAGGAGTTAGAAAAGGCTCAACTGCGTTTCTTCGA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCAAGCTGCCTTCTCTTaGATTCGAAGAAACGCAGTT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIQAAFS*IRRNAV
Trigger: AACTGCGTTTCTTCGAATTCAAGAGAAGGCAGCTTG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCTCACTTTTTCCTCCTaGCGTGCAATGTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLLTFSS*RAMLAV
Trigger: CACTGCCAACATTGCACGTCAGGAGGAAAAAGTGAG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCAATCAAGAGAAAGCTaGACCAGATCTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEQSRES*TRSCWS
Trigger: GCTCCAGCAAGATCTGGTTCAGCTTTCTCTTGATTG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGGCCAGAGTCACCCATaGCTTTCACTGTTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLGQSHP*LSLLCR
Trigger: TCTACACAACAGTGAAAGTCATGGGTGACTCTGGCC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGATACAATGGGGTGGTaGACAACTGGACATTTGGGG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLDTMGW*TTGHLG
Trigger: CCCCAAATGTCCAGTTGTTCACCACCCCATTGTATC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGCCAGTAAATGCCTTTaGCTTCCTTCATGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEASKCL*LPSCCP
Trigger: TGGGCAACATGAAGGAAGTCAAAGGCATTTACTGGC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATCCTTCATCGTGTCTaGAGATGTACTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEILHRV*RCTAAF
Trigger: GAAGGCTGCAGTACATCTGCAGACACGATGAAGGAT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTCCTGAGTCCCCAGTaGCTCCTTCTGGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEFLSPQ*LLLVSL
Trigger: TAAAGATACCAGAAGGAGGCACTGGGGACTCAGGAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAGTTCTTCACGCTGTTaGCTCTCAAATTCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWISSSRC*LSNSSP
Trigger: CGGACTTGAATTTGAGAGGCAACAGCGTGAAGAACT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATGGCGTTCTTTATATTaGAGCCTGTACTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSWRSLY*SLYSTG
Trigger: GCCAGTGGAGTACAGGCTGCAATATAAAGAACGCCA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAGACTGGCAAGTTTCTaGCTCTGCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSRLASF*LCSSIS
Trigger: GGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGTGCGACATTCTGACTaGCTTGAAGATACAATGGGG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEVRHSD*LEDTMG
Trigger: CCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCAC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGTGCGACATTCTGACTaGCTTGAAGATACAATGGGG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFVRHSD*LEDTMG
Trigger: CCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCAC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTTCCAGACCTCAGGTaGGACATTCTGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFPDLR*DILTAL
Trigger: CAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTCTTGGGACGTATGTTaGAGCAAAGTCCAACTGGAC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTESWDVC*SKVQLD
Trigger: GTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCATAAGGGCCTTCTTTaGGATGCTCACGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLHKGLL*DAHGLS
Trigger: TGAGAGTCCGTGAGCATCCCAAAGAAGGCCCTTATG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCATACTTAAAGCTGTaGGGGAGTCTAAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPYLKL*GSLRGQ
Trigger: TTGCCCTCTTAGACTCCCCCACAGCTTTAAGTATGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCGTTGGAGTTCTTCTTaGACGCGGAGAAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRWSSS*TRRKVS
Trigger: AGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTGGTTTGCATTGGCCTaGTACTGTGCAAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEWFALA*YCASCS
Trigger: AGAACAGCTTGCACAGTACCAGGCCAATGCAAACCA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTGGAGCTTTTGCAGCTaGTTTGCATTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLWSFCS*FALAWY
Trigger: GTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTTTTCAGCACTGACTaGCAAGCTGGAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFFSTD*QAGRSH
Trigger: GTGGCTTCTTCCAGCTTGCCAGTCAGTGCTGAAAAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTCACCAGTGCAATGTaGGTGTTCAGAAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFTSAM*VFRRTS
Trigger: GCTAGTCCTTCTGAACACCCACATTGCACTGGTGAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCTGAAGGTGCTCAGGTaGACTATTTCTGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLLKVLR*TISGTH
Trigger: GTGGGTTCCAGAAATAGTCCACCTGAGCACCTTCAG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGCCTTGAAGATACAATaGGGTGGTGAACAACTGGAC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSALKIQ*GGEQLD
Trigger: GTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGATGCTCTCTCCTCATaGGAAATGCCTTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSDALSS*EMPSDR
Trigger: TCTGTCTGAAGGCATTTCCCATGAGGAGAGAGCATC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATGCAGTTTCAGCATTTaGTCCGGGAATTGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSCSFSI*SGNCTR
Trigger: CCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACACGATGCAAATCCTaGAGGCGTCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTRCKS*RRLWTS
Trigger: AGAAGTCCAAAGACGCCTTCAGGATTTGCATCGTGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAAGAAAAGTCATAGGTaGAGGTCTTGGTCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFKKSHR*RSWSVL
Trigger: GAGAACGGACCAAGACCTTCACCTATGACTTTTCTT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCAAGTGGATCTTACTaGCGGTTTCACATGGCATTT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPSGSY*RFHMAF
Trigger: AAATGCCATGTGAAACCGTCAGTAAGATCCACTTGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGAATCACAGCACCTTaGTTTAGATGTGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRITAP*FRCVAS
Trigger: GGAGGCCACACATCTAAATCAAGGTGCTGTGATTCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCAGTTCAGCCTTGTCTaGTTTCTGCTTTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEQFSLV*FLLFLH
Trigger: ATGGAGGAAAAGCAGAAATCAGACAAGGCTGAACTG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACAAGCTGCCTTCTCTTaGATTCGAAGAAACGCAGTT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSQAAFS*IRRNAV
Trigger: AACTGCGTTTCTTCGAATTCAAGAGAAGGCAGCTTG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCATTTTCTCGAAATCTTaGGGCACTTCCGTGACATCT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIIFSKS*GTSVTS
Trigger: AGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAAT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAACAGAGTTGGCAAGTaGTTCTGCAGGAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLNRVGK*FCRRYC
Trigger: ACAGTACCTCCTGCAGAATCACTTGCCAACTCTGTT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTGATTTTTCAGCACTaGCTGGCAAGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVIFQH*LASWKK
Trigger: CTTCTTCCAGCTTGCCAGTCAGTGCTGAAAAATCAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAATCAAGAGAAAGCTaGACCAGATCTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQSRES*TRSCWS
Trigger: GCTCCAGCAAGATCTGGTTCAGCTTTCTCTTGATTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAGTCTGGAATTTGGATaGCACCTGAACTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTESLEFG*HLNSIW
Trigger: CCAAATGGAGTTCAGGTGTCATCCAAATTCCAGACT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCCAGGGAAGGGACATTaGCTTCCATATTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEPGKGH*LPYFHE
Trigger: TTCATGGAAATATGGAAGTCAATGTCCCTTCCCTGG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGTTATACAACATGACTaGAGACAGGTTCTCACGGGA +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEVIQHD*RQVLTG
Trigger: TCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAAC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTGCGAATCTGGAGCTaGACGATTTCTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLLRIWS*TISVSL
Trigger: CAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATCTTGTCTCTTCTTCTaGAGCTCGATTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSCLFF*SSISCC
Trigger: ACAGCAGGAAATCGAGCTGCAGAAGAAGAGACAAGA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCACTAGCTTGACAAGCTaGCTTCTCTTGAATTCGAAG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWITSLTS*LLLNSK
Trigger: CTTCGAATTCAAGAGAAGGCAGCTTGTCAAGCTAGT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTCTTCCTTCACCAGTaGAATGTGGGTGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVFLHQ*NVGVQK
Trigger: CTTCTGAACACCCACATTGCACTGGTGAAGGAAGAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGATCACATCAAATTGTaGACCCGGAGGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEDHIKL*TRRRYV
Trigger: AACATACCTCCTCCGGGTGCACAATTTGATGTGATC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTATGTGTGGGGCTAAGTaGTTCAGAAATGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLMCGAK*FRNGRL
Trigger: AAGCCTGCCATTTCTGAAGCACTTAGCCCCACACAT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACAATATCTTGCTCCGTaGAAGCATCGTCTCTACCAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSQYLAP*KHRLYQ
Trigger: TTGGTAGAGACGATGCTTCCACGGAGCAAGATATTG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACTTGATTTAGATGTGTaGCCTCCACGATCTGAACAC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLDLDV*PPRSEH
Trigger: GTGTTCAGATCGTGGAGGCCACACATCTAAATCAAG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACTTGGCGGCTTCCTTTaGATGGTTAAAGCGAAACAT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLGGFL*MVKAKH
Trigger: ATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGTTCTTTGAGTCGTTaGAGTTCTTCTTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSSLSR*SSSWTR
Trigger: CCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTCTTCCAACAGAGTTaGCAAGTGATTCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFFQQS*QVILQE
Trigger: CTCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTCACCAGTGCAATGTaGGTGTTCAGAAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFTSAM*VFRRTS
Trigger: GCTAGTCCTTCTGAACACCCACATTGCACTGGTGAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGCCTTGAAGATACAATaGGGTGGTGAACAACTGGAC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLALKIQ*GGEQLD
Trigger: GTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTGTTTTCACTGTCCTaGAATACCTCGGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELFSLS*NTSGTE
Trigger: CTCAGTACCCGAGGTATTCCAGGACAGTGAAAACAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACTGTGCCGAGGGTTTTaGAAACCATTTCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLCRGF*KPFLVK
Trigger: TTTCACAAGAAATGGTTTTCAAAACCCTCGGCACAG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTTCATTTATCCGACTaGAGAGTCCTTCACAGATCC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFHLSD*RVLHRS
Trigger: GGATCTGTGAAGGACTCTTCAGTCGGATAAATGAAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGTATTTGCAGCATCCTaGGATAAATCAGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSVFAAS*DKSAKA
Trigger: TGCCTTAGCTGATTTATCTCAGGATGCTGCAAATAC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAATTGACATCAGCAGGTaGAATGGTGGCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSIDISR*NGGNHD
Trigger: ATCATGATTGCCACCATTTCACCTGCTGATGTCAAT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCTTGCTTCATTCTGCTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWILASFC*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCAGCAGAATGAAGCAAG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAATCCCTTCTTTCCTaGGGGCTAGAGTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQSLLS*GLEFVL
Trigger: AAGAACAAACTCTAGCCCTCAGGAAAGAAGGGATTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAATTTTCTCGAAATCTTaGGGCACTTCCGTGACATCT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSIFSKS*GTSVTS
Trigger: AGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAAT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGTCTGGAATTTGGATaGCACCTGAACTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSLEFG*HLNSIW
Trigger: CCAAATGGAGTTCAGGTGTCATCCAAATTCCAGACT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCCAGGGAAGGGACATTaGCTTCCATATTTCCATGAA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLPGKGH*LPYFHE
Trigger: TTCATGGAAATATGGAAGTCAATGTCCCTTCCCTGG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGAACAACAACACACCTaGATTCACTTAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEEQQHT*IHLKHG
Trigger: GCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGTTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGAACAACAACACACCTaGATTCACTTAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSEQQHT*IHLKHG
Trigger: GCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGTTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGAGTCATCAGCTCACTaGAATTTTCTGACTGACTCT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFESSAH*NFLTDS
Trigger: AGAGTCAGTCAGAAAATTTCAGTGAGCTGATGACTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAAGTCCAACTGGACTTaGCTCTCAAGCCATGTTTAT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSKSNWT*LSSHVY
Trigger: ATAAACATGGCTTGAGAGTCAAGTCCAGTTGGACTT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGTTCTTCACGCTGTTaGCTCTCAAATTCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSSSRC*LSNSSP
Trigger: CGGACTTGAATTTGAGAGGCAACAGCGTGAAGAACT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTTTTCCTCCTGACGTaGAATGTTGGCAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEFFLLT*NVGSEF
Trigger: GAATTCACTGCCAACATTGCACGTCAGGAGGAAAAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGATCACATCAAATTGTaGACCCGGAGGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLDHIKL*TRRRYV
Trigger: AACATACCTCCTCCGGGTGCACAATTTGATGTGATC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCCTGAAGCAGGTGACTaGTGGTATCTTTATAAAGGT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEPEAGD*WYLYKG
Trigger: ACCTTTATAAAGATACCAGCAGTCACCTGCTTCAGG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAATTTGGTCCGGGAATTaGACAAGGCTCTGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSIWSGN*TRLCLN
Trigger: ATTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAAT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAAGCTTCATCCCATCTaGTGGTTTCATTTATCCGAC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFKLHPI*WFHLSD
Trigger: GTCGGATAAATGAAACCACCAGATGGGATGAAGCTT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGCAAGATCAACCAAGTaGATCTTACTGACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFARSTK*ILLTVS
Trigger: TGAAACCGTCAGTAAGATCCACTTGGTTGATCTTGC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCAGCCTGTACTCCACTaGCTTTATTTTCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFQPVLH*LYFLEI
Trigger: GATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGGAGGTACTGTAGCTaGCGTTCTTTATATTGCAGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRRYCS*RSLYCS
Trigger: GCTGCAATATAAAGAACGCCAGCTACAGTACCTCCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGAAAACCATTTCTTGTaGAACGTAATCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIENHFL*NVIWAF
Trigger: AAAAGCCCAGATTACGTTTCACAAGAAATGGTTTTC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGAATCAAATTTAGCCTaGGTGAACTTGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFESNLA*VNLMVK
Trigger: CTTCACCATCAAGTTCACTCAGGCTAAATTTGATTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCTTGCTTCATTCTGCTaGAGTTTTTCCTCCATACTT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFLASFC*SFSSIL
Trigger: AAGTATGGAGGAAAAACTTCAGCAGAATGAAGCAAG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCCTTGGTCAATTCTTaGACTCTTGCTTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSLVNS*TLASFC
Trigger: GCAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCGATGCCAATCAAATaGGGCAGTTCAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSMPIK*GSSESK
Trigger: TTTGGATTCTGAACTGCCTCATTTGATTGGCATCGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAATTTGGATGACACCTaGACTCCATTTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTENLDDT*TPFGKT
Trigger: AGTTTTGCCAAATGGAGTTCAGGTGTCATCCAAATT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAACCCACTGAAGGTTTaGGTTTCTGTAAGAAGACTA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFNPLKV*VSVRRL
Trigger: TAGTCTTCTTACAGAAACTCAAACCTTCAGTGGGTT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAAAGGTCATCATCGATaGCAATCAAATGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEKGHHR*QSNEAV
Trigger: AACTGCCTCATTTGATTGGCATCGATGATGACCTTT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGCCTTGTCTGATTTCTaGTTTTCCTCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSALSDF*FSSISS
Trigger: AGAAGAAATGGAGGAAAAGCAGAAATCAGACAAGGC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACTAGCTTGACAAGCTaGCTTCTCTTGAATTCGAAG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTSLTS*LLLNSK
Trigger: CTTCGAATTCAAGAGAAGGCAGCTTGTCAAGCTAGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAATTGCACAAGGCTCTaGTTAAATGCAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSNCTRL*LNAELF
Trigger: AAAGAGCTCTGCATTTAAGCAGAGCCTTGTGCAATT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGCGGCTTCCTTTGGATaGTTAAAGCGAAACATATTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLAASFG*LKRNIL
Trigger: CAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAATTCAAAGGTGGCTTaGAGCTTTTGCAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLNSKVA*SFCSWF
Trigger: AAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGAAGCAGGTGACTGCTaGTATCTTTATAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLEAGDC*YLYKGL
Trigger: CAGACCTTTATAAAGATACCAGCAGTCACCTGCTTC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAATTTGGATGACACCTaGACTCCATTTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLNLDDT*TPFGKT
Trigger: AGTTTTGCCAAATGGAGTTCAGGTGTCATCCAAATT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTAAAGCATGGCATTTaGTCACATCAAATTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELKHGI*SHQIVH
Trigger: GTGCACAATTTGATGTGATCAAATGCCATGCTTTAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR TCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACCATGTTTATCTTTATaGGTCATCAGCTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSPCLSL*VISSLK
Trigger: TTTCAGTGAGCTGATGACTCATAAAGATAAACATGG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGAATGAGATTCTGTTaGCTGCATGTCAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRMRFC*LHVSLQ
Trigger: TTGAAGACTGACATGCAGTCAACAGAATCTCATTCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGTTTACGTTGAATGGTaGCATTGTGAAGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEVYVEW*HCEVSH
Trigger: ATGAGAAACTTCACAATGGCACCATTCAACGTAAAC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAACTTGCTTCTTCTTTaGAAGAGTATTTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTENLLLL*KSICSI
Trigger: GATGCTGCAAATACTCTTGCAAAGAAGAAGCAAGTT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTATTTGTCCATTCCTTaGTCAATTCTTGAACTCTTG +
Preference number: 4 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIYLSIP*SILELL
Trigger: CAAGAGTTCAAGAATTGACCAAGGAATGGACAAATA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CCA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTTATAGACACTTCTTaGGACGTATGTTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFIDTS*DVCCSK
Trigger: TTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGAAAACCATTTCTTGTaGAACGTAATCTGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLENHFL*NVIWAF
Trigger: AAAAGCCCAGATTACGTTTCACAAGAAATGGTTTTC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR TCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCAAAGAGCCTCATCTTaGGAATTGAAAGTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLQRASS*ELKVSF
Trigger: GAAACTTACTTTCAATTCTCAAGATGAGGCTCTTTG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCCAGTTTGCCCATATaGAAAGACACAAGCATTATA +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSSLPI*KDTSII
Trigger: TATAATGCTTGTGTCTTTGCATATGGGCAAACTGGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR GCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTAGAGAACAAGTCACATaGCTAAGAAGGTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFREQVT*LRRSFK
Trigger: TTTAAAAGACCTTCTTAGGCATGTGACTTGTTCTCT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR GCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTAGAGCATGAAAAATaGTCATTGAGCCGAGATTAT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVEHEK*SLSRDY
Trigger: ATAATCTCGGCTCAATGAGCATTTTTCATGCTCTAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELVYVE*CHCEVS
Trigger: AGAAACTTCACAATGGCACCATTCAACGTAAACTAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CCA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTACTGACGGTTTCACATaGCATTTCAGAATCAAATTT +
Preference number: 4 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFTDGFT*HFRIKF
Trigger: AAATTTGATTCTGAAATGCCATGTGAAACCGTCAGT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTATTTGTCCATTCCTTaGTCAATTCTTGAACTCTTG +
Preference number: 4 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEYLSIP*SILELL
Trigger: CAAGAGTTCAAGAATTGACCAAGGAATGGACAAATA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CCA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLLVYVE*CHCEVS
Trigger: AGAAACTTCACAATGGCACCATTCAACGTAAACTAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CCA 90 bp GCGCGGGGTCCCACTAGCCCAGAACTCCGCGGTCGCCGGCGACGCTaGCTACTCAGATCGCGGCTCCCGCCCACTTCCCTCTCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: ARGPTSPELRGRRRR*LLRSRLPPTSLSPP
Trigger: CGGGGGCGAGAGGGAAGTGGGCGGGAGCCGCGATCTGAGTAGCCAGCGTCGCCGGCGACCGCGGAGTTCTGGGCTAGTGGGACCCCGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp AGAGGCCCGGTAAGGCGCCGCACCCTCTGCTGGCCTCAGGCTCCCTaGAGCTTCGCTCTCGCTGCTGCCAACCCGAGCTTCCGGAGAATG +
Preference number: 5 (lower is better)
Translates to: RGPVRRRTLCWPQAP*SFALAAANPSFRRM
Trigger: CATTCTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCGCCTTACCGGGCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 90 bp AGTCCTTTTCCCTGCGATTCATGGGCCGGACCCTCACGGCCACCTTaGCCGATGCCATCGCTCATCCCGAACCAGCCCGCGCGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SPFPCDSWAGPSRPP*PMPSLIPNQPARGP
Trigger: GGGACCCCGCGCGGGCTGGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAAAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp TGTAGCTGCAAAGACAGAGGCCCGGTAAGGCGCCGCACCCTCTGCTaGCCTCAGGCTCCCTGCAGCTTCGCTCTCGCTGCTGCCAACCCG +
Preference number: 5 (lower is better)
Translates to: CSCKDRGPVRRRTLC*PQAPCSFALAAANP
Trigger: CGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCGCCTTACCGGGCCTCTGTCTTTGCAGCTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 90 bp ACCTGTAGCTGCAAAGACAGAGGCCCGGTAAGGCGCCGCACCCTCTaGTGGCCTCAGGCTCCCTGCAGCTTCGCTCTCGCTGCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: TCSCKDRGPVRRRTL*WPQAPCSFALAAAN
Trigger: GTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCGCCTTACCGGGCCTCTGTCTTTGCAGCTACAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGGTAAGCCACCCACTTaGGGAGGTCCCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LPCIGARFDEKALLWWFLGKPPT*GGPRLA
Trigger: AGCCAGCCTGGGACCTCCCAAAGTGGGTGGCTTACC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp TTCTGCCTCTGCTCTTCAATCTCCATGCCCAGGGTGGAGTGCCTCTaGAGCGCAGAATGTCTCCTCTCCAGCCTGGCCAGGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: FCLCSSISMPRVECL*SAECLLSSLARARS
Trigger: GGAGCGGGCCCTGGCCAGGCTGGAGAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTGGAAGCTGCGGCGTTaGAGGCTCTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CPASEPASTRRHCCGGSSWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp TCCCCACGCCGCAGGAGCTGGATCATCTCCTGCTTCTCTCGGAGCTaGTCTTCCAGATGGGCCACGAGCATGACCTGCTCCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SPRRRSWIISCFSRS*SSRWATSMTCSFSC
Trigger: GCAGGAGAAGGAGCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp TCCACCCACTGTACCTCCCCACGCCGCAGGAGCTGGATCATCTCCTaGTTCTCTCGGAGCTGCTCTTCCAGATGGGCCACGAGCATGACC +
Preference number: 5 (lower is better)
Translates to: STHCTSPRRRSWIIS*FSRSCSSRWATSMT
Trigger: GGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGGGGAGGTACAGTGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCACGATTTCTGTCTCCTaGCGCTGGGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LPCIGARFDEKALLWWFLTISVS*RWVSTS
Trigger: GGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGT...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp GCAAGTTTCTGCCTCTGCTCTTCAATCTCCATGCCCAGGGTGGAGTaGCTCTGCAGCGCAGAATGTCTCCTCTCCAGCCTGGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ASFCLCSSISMPRVE*LCSAECLLSSLARA
Trigger: GGCCCTGGCCAGGCTGGAGAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp CTCTTCTCCTCTTCCACCCACTGTACCTCCCCACGCCGCAGGAGCTaGATCATCTCCTGCTTCTCTCGGAGCTGCTCTTCCAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: LFSSSTHCTSPRRRS*IISCFSRSCSSRWA
Trigger: GGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGGGGAGGTACAGTGGGTGGAAGAGGAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTGTGGAGGGGAGATGTaGCGGACTGGAGCATCACGC +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISCGGEM*RTGASR
Trigger: GCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCACCCTCACGGCCACCTaGACCGATGCCATCGCTCAT +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISTLTAT*TDAIAH
Trigger: ATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGTGGTCCGGTTGATATaGCCCGCATCCATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: GELPCIGARFDEKALLWWVVRLI*PASISS
Trigger: AGAACTTATGGATGCGGGCAATATCAACCGGACCAC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGGGCAATCTGATTCCCTaGAGCAAGCAGCGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: GELPCIGARFDEKALLWWGNLIP*SKQRFQ
Trigger: CTGAAAACGCTGCTTGCTCAAGGGAATCAGATTGCC...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGCGCTCCAGTTCAGCCTaGTCTGATTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVRSSSA*SDFCFS
Trigger: GGAAAAGCAGAAATCAGACAAGGCTGAACTGGAGCG...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCTGGCGTTCTTTATATaGCAGCCTGTACTCCACTGG +
Preference number: 5 (lower is better)
Translates to: GELPCIGARFDEKALLWWLAFFI*QPVLHW
Trigger: CCAGTGGAGTACAGGCTGCAATATAAAGAACGCCAG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGGTGGCTTGGAGCTTTaGCAGCTGGTTTGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LPCIGARFDEKALLWWFLGGLEL*QLVCIG
Trigger: GCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp AAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTTGCGAATCTGGAGCTaGACGATTTCTGTCTCCTTGCGCTGGGTCTCCACCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KLRRLRLSSCLRIWS*TISVSLRWVSTSCC
Trigger: GCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 90 bp CACCCTCTGCTGGCCTCAGGCTCCCTGCAGCTTCGCTCTCGCTGCTaGCAACCCGAGCTTCCGGAGAATGAGATTCTGTTGACTGCATGT +
Preference number: 5 (lower is better)
Translates to: HPLLASGSLQLRSRC*QPELPENEILLTAC
Trigger: ACATGCAGTCAACAGAATCTCATTCTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGCTGCGGTGGTCCGGTaGATATTGCCCGCATCCATA +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISAAVVR*ILPASI
Trigger: TATGGATGCGGGCAATATCAACCGGACCACCGCAGC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAGCTGCGGTGGTCCGGTaGATATTGCCCGCATCCATA +
Preference number: 5 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKAAVVR*ILPASI
Trigger: TATGGATGCGGGCAATATCAACCGGACCACCGCAGC...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCACGATTTCTGTCTCCTaGCGCTGGGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISTISVS*RWVSTS
Trigger: GGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGT...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTGCAGCTGGTTTGCATaGGCCTGGTACTGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCCSWFA*AWYCAS
Trigger: GCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGTAAGCCACCCACTTaGGGAGGTCCCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQGKPPT*GGPRLA
Trigger: AGCCAGCCTGGGACCTCCCAAAGTGGGTGGCTTACC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS CCA 90 bp ATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTTGCGAATCTaGAGCTGCACGATTTCTGTCTCCTTGCGCTGGGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: MWKLRRLRLSSCLRI*SCTISVSLRWVSTS
Trigger: GGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CCA 90 bp GACTGGCAAGTTTCTGCCTCTGCTCTTCAATCTCCATGCCCAGGGTaGAGTGCCTCTGCAGCGCAGAATGTCTCCTCTCCAGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: DWQVSASALQSPCPG*SASAAQNVSSPAWP
Trigger: TGGCCAGGCTGGAGAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGTGTGCATCCTTTCCTaGCCCGCAGAGGACGTAGCG +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQVCILS*PAEDVA
Trigger: CGCTACGTCCTCTGCGGGCAAGGAAAGGATGCACAC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGTGTGCATCCTTTCCTaGCCCGCAGAGGACGTAGCG +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLVCILS*PAEDVA
Trigger: CGCTACGTCCTCTGCGGGCAAGGAAAGGATGCACAC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCGTGGTCCGGTTGATATaGCCCGCATCCATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LPCIGARFDEKALLWWFLVVRLI*PASISS
Trigger: AGAACTTATGGATGCGGGCAATATCAACCGGACCAC...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGAGCTCACGGATAAGTTaGACGTTGGCATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVSSRIS*TLASSL
Trigger: TAATGAGGATGCCAACGTCAAACTTATCCGTGAGCT...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGAGGCTCTCCTCCTGCTaGCGAATCTGGAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQRLSSC*RIWSCT
Trigger: CGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCT...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGTGGAAGCTGCGGCGTTaGAGGCTCTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCA...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp GACTGCTCTCTGCTGCCACTGTTCAGACTGGCAAGTTTCTGCCTCTaGTCTTCAATCTCCATGCCCAGGGTGGAGTGCCTCTGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: DCSLLPLFRLASFCL*SSISMPRVECLCSA
Trigger: TGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCTGAACAGTGGCAGCAGAGAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp AGCCCTGACTGCTCTCTGCTGCCACTGTTCAGACTGGCAAGTTTCTaGCTCTGCTCTTCAATCTCCATGCCCAGGGTGGAGTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SPDCSLLPLFRLASF*LCSSISMPRVECLC
Trigger: GCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCTGAACAGTGGCAGCAGAGAGCAGTCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp AGGAGCTGGATCATCTCCTGCTTCTCTCGGAGCTGCTCTTCCAGATaGGCCACGAGCATGACCTGCTCCTTCTCCTGCTCCTCTAGTCTC +
Preference number: 5 (lower is better)
Translates to: RSWIISCFSRSCSSR*ATSMTCSFSCSSSL
Trigger: GAGACTAGAGGAGCAGGAGAAGGAGCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp TTGCTGGAGCAAGGGATGATTAGCGCAGGCAGCGGCATCAGGCTCTaGCATCAGGACACACAGGAGGTCACGACACAGCTGTTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLEQGMISAGSGIRL*HQDTQEVTTQLLRE
Trigger: CTCTCTCAACAGCTGTGTCGTGACCTCCTGTGTGTCCTGATGCCAGAGCCTGATGCCGCTGCCTGCGCTAATCATCCCTTGCTCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTCTGTGCCGAGGGTTTaGAAAACCATTTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVSVPRV*KTISCE
Trigger: TTCACAAGAAATGGTTTTCAAAACCCTCGGCACAGA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCGAGTTCTTTGAGTCGTaGGAGTTCTTCTTGGACGCG +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCEFFES*EFFLDA
Trigger: CGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTC...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTCATCTTTTTCCTTTaGGAGCTGGTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVFIFFL*ELVQFL
Trigger: CAAGAACTGGACCAGCTCCAAAAGGAAAAAGATGAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCATCTTTTTCCTTTaGGAGCTGGTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GELPCIGARFDEKALLWWFIFFL*ELVQFL
Trigger: CAAGAACTGGACCAGCTCCAAAAGGAAAAAGATGAA...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGCCCATGATGATCTTTTaGAACACCATCGACCTCATA +
Preference number: 5 (lower is better)
Translates to: GELPCIGARFDEKALLWWPMMIF*NTIDLI
Trigger: TATGAGGTCGATGGTGTTCAAAAAGATCATCATGGG...CCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354981.7
CDS TCA 90 bp CCTGCAGCTTCGCTCTCGCTGCTGCCAACCCGAGCTTCCGGAGAATaGGATTCTGTTGACTGCATGTCAGTCTTCAAGGGCATGTGTGGG +
Preference number: 5 (lower is better)
Translates to: PAASLSLLPTRASGE*DSVDCMSVFKGMCG
Trigger: CCCACACATGCCCTTGAAGACTGACATGCAGTCAACAGAATCTCATTCTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 90 bp AGCTTGTTCTCGATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTaGTTGCGAATCTGGAGCTGCACGATTTCTGTCTCCTTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: SLFSMWKLRRLRLSS*LRIWSCTISVSLRW
Trigger: CCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 90 bp TGGATTTCATATTCTAACCTCTCCTGGTCCTTCTCCAGGGCTTCCTaGTCAGCCTCCAGGCTAGCCTGGAGCCCTGACTGCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: WISYSNLSWSFSRAS*SASRLAWSPDCSLL
Trigger: CAGCAGAGAGCAGTCAGGGCTCCAGGCTAGCCTGGAGGCTGAGCAGGAAGCCCTGGAGAAGGACCAGGAGAGGTTAGAATATGAAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000408042.5
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTCCAAATAGTTTCTTaGGAGGAAATTCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVFQIVS*EEIQGQ
Trigger: CTGCCCTTGAATTTCCTCCAAAGAAACTATTTGGAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTGTGGAGGGGAGATGTaGCGGACTGGAGCATCACGC +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTCGGEM*RTGASR
Trigger: GCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGTCAGTCCCACTTTGTaGATGTGGAGGGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISVSPTL*MWRGDV
Trigger: AACATCTCCCCTCCACATCAACAAAGTGGGACTGAC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAGAGTCACGAGGGACTaGTTAATATTTCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCRVTRD*LIFPPS
Trigger: GGAAGGGGGAAATATTAACAAGTCCCTCGTGACTCT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTCCTTGGTCAATTCTaGAACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVFLGQF*NSCFIL
Trigger: CAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCGTTGGAGTTCTTCTaGGACGCGGAGAAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSLEFF*DAEKGL
Trigger: GAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTCAGCCTTCTCGTTGTaGTTGAGTTCTTTGAGTCGT +
Preference number: 5 (lower is better)
Translates to: CPASEPASTRRHCCGGSSSAFSL*LSSLSR
Trigger: ACGACTCAAAGAACTCAACAACAACGAGAAGGCTGA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCCTGGCGTTCTTTATATaGCAGCCTGTACTCCACTGG +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISLAFFI*QPVLHW
Trigger: CCAGTGGAGTACAGGCTGCAATATAAAGAACGCCAG...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTTTCTTCCAACAGAGTaGGCAAGTGATTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: CPASEPASTRRHCCGGSSFLPTE*ASDSAG
Trigger: TCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAAA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTGCAGCTGGTTTGCATaGGCCTGGTACTGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLCSWFA*AWYCAS
Trigger: GCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGGGGAGCTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGTTGTCTACATCCAATTaGTCAAGCATGGAAGACTAC +
Preference number: 5 (lower is better)
Translates to: GGAALHRSPLRREGTAVVLSTSN*SSMEDY
Trigger: GTAGTCTTCCATGCTTGACAAATTGGATGTAGACAA...CACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp TGGAGCTGCACGATTTCTGTCTCCTTGCGCTGGGTCTCCACCTCCTaGTGCATCCGCTCCAGTTCAGCCTTGTCTGATTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: WSCTISVSLRWVSTS*CIRSSSALSDFCFS
Trigger: GGAAAAGCAGAAATCAGACAAGGCTGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 90 bp CACTGTTCAGACTGGCAAGTTTCTGCCTCTGCTCTTCAATCTCCATaGCCAGGGTGGAGTGCCTCTGCAGCGCAGAATGTCTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: HCSDWQVSASALQSP*PGWSASAAQNVSSP
Trigger: TGGAGAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCTGAACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCAGGTCATCTGGATTaGCGCCCAAAGAGCGAGAAA +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSGHLD*RPKSEK
Trigger: TTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAAAGAGTCACGAGGGACTaGTTAATATTTCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKRVTRD*LIFPPS
Trigger: GGAAGGGGGAAATATTAACAAGTCCCTCGTGACTCT...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAAGTTCTTCACGCTGTaGCCTCTCAAATTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCKFFTL*PLKFKS
Trigger: GGACTTGAATTTGAGAGGCAACAGCGTGAAGAACTT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAAGGCTCTCCTCCTGCTaGCGAATCTGGAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SEKEALWEKATFNRNGTVRLSSC*RIWSCT
Trigger: CGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCT...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCGCCTTCTCGTTGTTGTaGAGTTCTTTGAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISAFSLL*SSLSRW
Trigger: CCAACGACTCAAAGAACTCAACAACAACGAGAAGGC...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTTCTTCCAACAGAGTaGGCAAGTGATTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCFLPTE*ASDSAG
Trigger: TCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp GCTGCTCACTATAAAACTCAGACGCCAGTACGCTCTGCGGGGCACTaGAGGATGCTCTCTCCTCATGGGAAATGCCTTCAGACAGAACCA +
Preference number: 5 (lower is better)
Translates to: AAHYKTQTPVRSAGH*RMLSPHGKCLQTEP
Trigger: TGGTTCTGTCTGAAGGCATTTCCCATGAGGAGAGAGCATCCTGCAGTGCCCCGCAGAGCGTACTGGCGTCTGAGTTTTATAGTGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCCTTCCAAATAGTTTCTTaGGAGGAAATTCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: CPASEPASTRRHCCGGSSFQIVS*EEIQGQ
Trigger: CTGCCCTTGAATTTCCTCCAAAGAAACTATTTGGAA...GGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCAGTAAATCCTTTAGCTaGTTCTCGATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCSKSFS*FSMWKL
Trigger: CAGCTTCCACATCGAGAACAAGCTAAAGGATTTACT...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGAGTTCTTTGAGTCGTaGGAGTTCTTCTTGGACGCG +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLEFFES*EFFLDA
Trigger: CGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCCAAGTTCACTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSKFTS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGTGAACTTGGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTATTTTCTCGAAATCTaGAGGCACTTCCGTGACATC +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCYFLEI*RHFRDI
Trigger: GATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTGCTGTGGTGGTTCCTCTTGTCTACATCCAATTaGTCAAGCATGGAAGACTAC +
Preference number: 5 (lower is better)
Translates to: LPCIGARFDEKALLWWFLLSTSN*SSMEDY
Trigger: GTAGTCTTCCATGCTTGACAAATTGGATGTAGACAA...GAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp GAAGATGGCATGAGACCTGCTACTGACGTCGTTCATCCCAGTCGCTaGGGTGGTCCGGTTGATATTGCCCGCATCCATAAGTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: EDGMRPATDVVHPSR*GGPVDIARIHKFFY
Trigger: GTAGAAGAACTTATGGATGCGGGCAATATCAACCGGACCACCGCAGCGACTGGGATGAACGACGTCAGTAGCAGGTCTCATGCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp ACTATAAAACTCAGACGCCAGTACGCTCTGCGGGGCACTGCAGGATaGTCTCTCCTCATGGGAAATGCCTTCAGACAGAACCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: TIKLRRQYALRGTAG*SLLMGNAFRQNQAE
Trigger: CTCTGCTTGGTTCTGTCTGAAGGCATTTCCCATGAGGAGAGAGCATCCTGCAGTGCCCCGCAGAGCGTACTGGCGTCTGAGTTTTATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATCTGTGCCGAGGGTTTaGAAAACCATTTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKSVPRV*KTISCE
Trigger: TTCACAAGAAATGGTTTTCAAAACCCTCGGCACAGA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTCCTTGGTCAATTCTaGAACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCFLGQF*NSCFIL
Trigger: CAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGATGAAGAACAATATCTaGCTCCGTGGAAGCATCGTC +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQMKNNI*LRGSIV
Trigger: GACGATGCTTCCACGGAGCAAGATATTGTTCTTCAT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGAAGTTCTTCACGCTGTaGCCTCTCAAATTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQKFFTL*PLKFKS
Trigger: GGACTTGAATTTGAGAGGCAACAGCGTGAAGAACTT...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTCGTTGGAGTTCTTCTaGGACGCGGAGAAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTSLEFF*DAEKGL
Trigger: GAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTCTGTCTTCAGCAGGAGGAGGCAGACCCGGATCCTCGCATGGGGGAGCTGCTTGTTGTTGAGTTCTTaGAGTCGTTGGAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MSVFSRRRQTRILAWGSCLLLSS*SRWSSS
Trigger: AGAAGAACTCCAACGACTCAAAGAACTCAACAACAA...GCAGCTCCCCCATGCGAGGATCCGGGTCTGCCTCCTCCTGCTGAAGACAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCAGCCTTCTCGTTGTaGTTGAGTTCTTTGAGTCGT +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSAFSL*LSSLSR
Trigger: ACGACTCAAAGAACTCAACAACAACGAGAAGGCTGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTCTCAGCCTTCTCGTaGTTGTTGAGTTCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISFSAFS*LLSSLS
Trigger: ACTCAAAGAACTCAACAACAACGAGAAGGCTGAGAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCCAAGTTCACTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSKFTS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGTGAACTTGGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAGGTGGCTTGGAGCTTTaGCAGCTGGTTTGCATTGGC +
Preference number: 5 (lower is better)
Translates to: SEKEALWEKATFNRNGTVGGLEL*QLVCIG
Trigger: GCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACC...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGGAATTCAAAGGTGGCTaGGAGCTTTTGCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLEFKGG*ELLQLV
Trigger: AACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTC...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS TCA 90 bp CTTCACGCTGTTGCCTCTCAAATTCAAGTCCGGGGTTATACAACATaGCTGCAGACAGGTTCTCACGGGACTTCGAGAGGTCGGTCATGG +
Preference number: 5 (lower is better)
Translates to: LHAVASQIQVRGYTT*LQTGSHGTSRGRSW
Trigger: CCATGACCGACCTCTCGAAGTCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCGGACTTGAATTTGAGAGGCAACAGCGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 90 bp TCAGAAGGACTAGCGACTGGCACTGGTCATGGCCAGAGTCACCCATaGCTTTCACTGTTGTGTAGAGCAGTAACTGAACTTCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SEGLATGTGHGQSHP*LSLLCRAVTELLPG
Trigger: CCCTGGCAGAAGTTCAGTTACTGCTCTACACAACAGTGAAAGTCATGGGTGACTCTGGCCATGACCAGTGCCAGTCGCTAGTCCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS GCA 90 bp ATGCCTTCAGACAGAACCAAGCAGAGCACCTTGCCTTGCCTGGCCTaGTTGCCTCCGCTATTTATAGACACTTCTTGGGACGTATGTTGC +
Preference number: 5 (lower is better)
Translates to: MPSDRTKQSTLPCLA*LPPLFIDTSWDVCC
Trigger: GCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 90 bp TCATGGGAAATGCCTTCAGACAGAACCAAGCAGAGCACCTTGCCTTaGCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: SWEMPSDRTKQSTLP*LACLPPLFIDTSWD
Trigger: GTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGGCATTTCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp GGTAACGGCTGCCTGTCAGGGCCACATCAGCAGGCAGAGCATCCCATCCCCAAATTGTTGTTGAGTTCTTaGAGTCGTTGGAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GNGCLSGPHQQAEHPIPKLLLSS*SRWSSS
Trigger: AGAAGAACTCCAACGACTCAAAGAACTCAACAACAA...TTTGGGGATGGGATGCTCTGCCTGCTGATGTGGCCCTGACAGGCAGCCGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTATTTTCTCGAAATCTaGAGGCACTTCCGTGACATC +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQYFLEI*RHFRDI
Trigger: GATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCCCAACCACATCTATCTaGCCACAGGGGACGAACTTT +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTPTTSI*PQGTNF
Trigger: AAAGTTCGTCCCCTGTGGCAAGATAGATGTGGTTGG...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS TCA 90 bp CAAGTAAATCCTTTAGCTTGTTCTCGATGTGGAAGCTGCGGCGTTTaGGGCTCTCCTCCTGCTTGCGAATCTGGAGCTGCACGATTTCTG +
Preference number: 5 (lower is better)
Translates to: QVNPLACSRCGSCGV*GSPPACESGAARFL
Trigger: CAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 90 bp ACGCTGTTGCCTCTCAAATTCAAGTCCGGGGTTATACAACATGACTaGAGACAGGTTCTCACGGGACTTCGAGAGGTCGGTCATGGACAA +
Preference number: 5 (lower is better)
Translates to: TLLPLKFKSGVIQHD*RQVLTGLREVGHGQ
Trigger: TTGTCCATGACCGACCTCTCGAAGTCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCGGACTTGAATTTGAGAGGCAACAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp CTGACTGCCTTGAAGATACAATGGGGTGGTGAACAACTGGACATTTaGGGCTTCCTGAAGGTGCTCAGGTGGACTATTTCTGGAACCCAC +
Preference number: 5 (lower is better)
Translates to: LTALKIQWGGEQLDI*GFLKVLRWTISGTH
Trigger: GTGGGTTCCAGAAATAGTCCACCTGAGCACCTTCAGGAAGCCCCAAATGTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGCAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CCA 90 bp TTTCCAGACCTCAGGTGCGACATTCTGACTGCCTTGAAGATACAATaGGGTGGTGAACAACTGGACATTTGGGGCTTCCTGAAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: FPDLRCDILTALKIQ*GGEQLDIWGFLKVL
Trigger: GAGCACCTTCAGGAAGCCCCAAATGTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCTAGGACAGTAATCTaGACCTCAAACTCGAAGTGT +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLSRTVI*TSNSKC
Trigger: ACACTTCGAGTTTGAGGTCAAGATTACTGTCCTAGA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCACGGACTCTCAAATaGAAGGTTTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSRTLK*KVLDDF
Trigger: GAAGTCATCTAAAACCTTCAATTTGAGAGTCCGTGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGTAAGGCACGAAAACTaGCTTCTTCTTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQVRHEN*LLLCKS
Trigger: ACTCTTGCAAAGAAGAAGCAAGTTTTCGTGCCTTAC...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISLMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCTTAAAGCGAAACATATaGGTTCTTCCCAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: ATFNRNGTVTAACQGHISLKRNI*VLPKRI
Trigger: GATTCTCTTGGGAAGAACCAATATGTTTCGCTTTAA...GCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS TCA 90 bp ACTAGCTTGACAAGCTGCCTTCTCTTGAATTCGAAGAAACGCAGTTaGGCCTTTTCTAACTCCTCGCCATCTTCATCCCCTCCGGCACGA +
Preference number: 5 (lower is better)
Translates to: TSLTSCLLLNSKKRS*AFSNSSPSSSPPAR
Trigger: TCGTGCCGGAGGGGATGAAGATGGCGAGGAGTTAGAAAAGGCTCAACTGCGTTTCTTCGAATTCAAGAGAAGGCAGCTTGTCAAGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp TTTCGAGAGAGTCAGTCCCACTTTGTTGATGTGGAGGGGAGATGTTaGGGACTGGAGCATCACGCTGAAAAAGTCCCTGAGGTATTTCTC +
Preference number: 5 (lower is better)
Translates to: FRESQSHFVDVEGRC*GLEHHAEKVPEVFL
Trigger: GAGAAATACCTCAGGGACTTTTTCAGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGGACTGACTCTCTCGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 90 bp CTTTCCTTGCCCGCAGAGGACGTAGCGTGGGATACTAATTTTAATTaGGTCCTTCAGGTCATCTGGATTTGCGCCCAAAGAGCGAGAAAC +
Preference number: 5 (lower is better)
Translates to: LSLPAEDVAWDTNFN*VLQVIWICAQRARN
Trigger: GTTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTGAAGGACCCAATTAAAATTAGTATCCCACGCTACGTCCTCTGCGGGCAAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 90 bp TTGCCTTGCCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTTaGGACGTATGTTGCAGCAAAGTCCAACTGGACTTGACTCTCAAG +
Preference number: 5 (lower is better)
Translates to: LPCLACLPPLFIDTS*DVCCSKVQLDLTLK
Trigger: CTTGAGAGTCAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp CACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGGGCCACATCAGCAGTCAAAGACTCCTTTCTaGAAGAATGGTGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: HVQPQWNGNGCLSGPHQQSKTPF*KNGENS
Trigger: TGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTGA...CTGCTGATGTGGCCCTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTCAGTCACGGACTCTCAAATaGAAGGTTTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: LWEKATFNRNGTVTAACQSRTLK*KVLDDF
Trigger: GAAGTCATCTAAAACCTTCAATTTGAGAGTCCGTGA...CTGACAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCATGAAGAACAATATCTaGCTCCGTGGAAGCATCGTC +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTMKNNI*LRGSIV
Trigger: GACGATGCTTCCACGGAGCAAGATATTGTTCTTCAT...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAGAATTCAAAGGTGGCTaGGAGCTTTTGCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SEKEALWEKATFNRNGTVEFKGG*ELLQLV
Trigger: AACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTC...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp TCTTCTTGGACGCGGAGAAAGGTCTCTTCTTCTTGTCTCTTCTTCTaGAGCTCGATTTCCTGCTGTTCCCTCAGCCTCTCCTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SSWTRRKVSSSCLFF*SSISCCSLSLSSSN
Trigger: ATTTGAAGAGGAGAGGCTGAGGGAACAGCAGGAAATCGAGCTGCAGAAGAAGAGACAAGAAGAAGAGACCTTTCTCCGCGTCCAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CCA 90 bp AGGCCACTCTTCCTCTTCTCCCTGAGCTTGGCGGCTTCCTTTGGATaGTTAAAGCGAAACATATTGGTTCTTCCCAAGAGAATCACAGCA +
Preference number: 5 (lower is better)
Translates to: RPLFLFSLSLAASFG*LKRNILVLPKRITA
Trigger: TGCTGTGATTCTCTTGGGAAGAACCAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGAGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp CAGAAGGCCACTCTTCCTCTTCTCCCTGAGCTTGGCGGCTTCCTTTaGATGGTTAAAGCGAAACATATTGGTTCTTCCCAAGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: QKATLPLLPELGGFL*MVKAKHIGSSQENH
Trigger: GTGATTCTCTTGGGAAGAACCAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGAGTGGCCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp AATTTTTCCTTCTCCGCAAGTAAATCCTTTAGCTTGTTCTCGATGTaGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTTGCGAATCTGG +
Preference number: 5 (lower is better)
Translates to: NFSFSASKSFSLFSM*KLRRLRLSSCLRIW
Trigger: CCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTGCGGAGAAGGAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCCGGATAAGTTTGACGTaGGCATCCTCATTAATGGTA +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTRISLT*ASSLMV
Trigger: TACCATTAATGAGGATGCCAACGTCAAACTTATCCG...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTTAAAGCGAAACATATaGGTTCTTCCCAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLLKRNI*VLPKRI
Trigger: GATTCTCTTGGGAAGAACCAATATGTTTCGCTTTAA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTTCTCAGCCTTCTCGTaGTTGTTGAGTTCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTFSAFS*LLSSLS
Trigger: ACTCAAAGAACTCAACAACAACGAGAAGGCTGAGAA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp AGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAACGGCTGCCTGTTTTCCAGTTCAAGCTaGGCATACTGTTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: STVGKGHVQPQWNGNGCLFSSSS*AYCSSF
Trigger: AAAAGATGAACAGTATGCCAAGCTTGAACTGGAAAA...CAGGCAGCCGTTACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGCAGAGCACCTTGCCTaGCCTGGCCTGCTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFAEHLA*PGLLAS
Trigger: GGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 90 bp GGCTCTACCCCGTCCCGTGGCTGCTGTAGTCAAAGACTCCTTTCTTaGAGAATGGTGAAAACTCACAAATGGTATGTTTCGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GSTPSRGCCSQRLLS*RMVKTHKWYVSRES
Trigger: TGACTCTCTCGAAACATACCATTTGTGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTGACTACAGCAGCCACGGGACGGGGTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS CCA 90 bp AAACTCGAAGTGTGCATCCTTTCCTTGCCCGCAGAGGACGTAGCGTaGGATACTAATTTTAATTGGGTCCTTCAGGTCATCTGGATTTGC +
Preference number: 5 (lower is better)
Translates to: KLEVCILSLPAEDVA*DTNFNWVLQVIWIC
Trigger: GCAAATCCAGATGACCTGAAGGACCCAATTAAAATTAGTATCCCACGCTACGTCCTCTGCGGGCAAGGAAAGGATGCACACTTCGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 90 bp GCCTTCTCGTTGTTGTTGAGTTCTTTGAGTCGTTGGAGTTCTTCTTaGACGCGGAGAAAGGTCTCTTCTTCTTGTCTCTTCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AFSLLLSSLSRWSSS*TRRKVSSSCLFFCS
Trigger: GCTGCAGAAGAAGAGACAAGAAGAAGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTCAACAACAACGAGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS-3UTR CAA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTAGTAAGGCACGAAAACTaGCTTCTTCTTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: SEKEALWEKATFNRNGTVVRHEN*LLLCKS
Trigger: ACTCTTGCAAAGAAGAAGCAAGTTTTCGTGCCTTAC...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 90 bp GTTGGCAGTGAATTCAAAGGTGGCTTGGAGCTTTTGCAGCTGGTTTaGATTGGCCTGGTACTGTGCAAGCTGTTCTTCTTTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VGSEFKGGLELLQLV*IGLVLCKLFFFFFH
Trigger: ATGGAAGAAAAAGAAGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp GCCTGCTTGCCTCCGCTATTTATAGACACTTCTTGGGACGTATGTTaGAGCAAAGTCCAACTGGACTTGACTCTCAAGCCATGTTTATCT +
Preference number: 5 (lower is better)
Translates to: ACLPPLFIDTSWDVC*SKVQLDLTLKPCLS
Trigger: AGATAAACATGGCTTGAGAGTCAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 90 bp GCAATGTTGGCAGTGAATTCAAAGGTGGCTTGGAGCTTTTGCAGCTaGTTTGCATTGGCCTGGTACTGTGCAAGCTGTTCTTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: AMLAVNSKVAWSFCS*FALAWYCASCSSFS
Trigger: AGAAAAAGAAGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGCCAACATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTLMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGAGGCTCTCCTCCTGCTaGCGAATCTGGAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTERLSSC*RIWSCT
Trigger: CGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTGGAAGCTGCGGCGTTaGAGGCTCTCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEWKLRR*RLSSCL
Trigger: CAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp GAACTTTGCTGCGCAGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCTTTTCCAGTTCAAGCTaGGCATACTGTTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: ELCCAVRRKHCGKRPRSTFSSSS*AYCSSF
Trigger: AAAAGATGAACAGTATGCCAAGCTTGAACTGGAAAA...GGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACTGCGCAGCAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCCCCACAAGCCTGGCTaGGCTGATCACCTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFPHKPG*ADHLCA
Trigger: GGCACAAAGGTGATCAGCCAAGCCAGGCTTGTGGGG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 90 bp AGAGAACAAGTCACATGCCTAAGAAGGTCTTTTAAAGGGCACTCTTaGAGTTTCAGCATTTGGTCCGGGAATTGCACAAGGCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: REQVTCLRRSFKGHS*SFSIWSGNCTRLCL
Trigger: TAAGCAGAGCCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAAGAGTGCCCTTTAAAAGACCTTCTTAGGCATGTGACTTGTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 90 bp TGCCTAAGAAGGTCTTTTAAAGGGCACTCTTGCAGTTTCAGCATTTaGTCCGGGAATTGCACAAGGCTCTGCTTAAATGCAGAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: CLRRSFKGHSCSFSI*SGNCTRLCLNAELF
Trigger: AAAGAGCTCTGCATTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAAGAGTGCCCTTTAAAAGACCTTCTTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp AGTGAGAAGGAAGCACTGTGGGAAAAGGCCACGTTCAACCGCAATGGAACGGTATCAAAGACTCCTTTCTaGAAGAATGGTGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: SEKEALWEKATFNRNGTVSKTPF*KNGENS
Trigger: TGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTGA...TACCGTTCCATTGCGGTTGAACGTGGCCTTTTCCCACAGTGCTTCCTTCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACCCTCACGGCCACCTaGACCGATGCCATCGCTCAT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTLTAT*TDAIAH
Trigger: ATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGCTGCGGTGGTCCGGTaGATATTGCCCGCATCCATA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEAAVVR*ILPASI
Trigger: TATGGATGCGGGCAATATCAACCGGACCACCGCAGC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAACGATTTCTGTCTCCTaGCGCTGGGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSTISVS*RWVSTS
Trigger: GGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTACCAAGCAGAGCACCTaGCCTTGCCTGGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLTKQST*PCLACL
Trigger: CAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGAGCAAACACGCTGGTaGAGGGTCAGGTGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEEQTRW*RVRCCA
Trigger: TGCACAGCACCTGACCCTCAACCAGCGTGTTTGCTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 90 bp TTCGAAAAGAAGCTTCATCCCATCTGGTGGTTTCATTTATCCGACTaGAGAGTCCTTCACAGATCCGAGGTATTAAGCCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: FEKKLHPIWWFHLSD*RVLHRSEVLSQNLQ
Trigger: CTGGAGATTCTGGCTTAATACCTCGGATCTGTGAAGGACTCTTCAGTCGGATAAATGAAACCACCAGATGGGATGAAGCTTCTTTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 90 bp AAGAGCCTCATCTTGAGAATTGAAAGTAAGTTTCCAGACCTCAGGTaGGACATTCTGACTGCCTTGAAGATACAATGGGGTGGTGAACAA +
Preference number: 5 (lower is better)
Translates to: KSLILRIESKFPDLR*DILTALKIQWGGEQ
Trigger: TTGTTCACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAACTTACTTTCAATTCTCAAGATGAGGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGGTGGCTTGGAGCTTTaGCAGCTGGTTTGCATTGGC +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEGGLEL*QLVCIG
Trigger: GCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS GCA 90 bp ACTTCCTTCATGTTGCCCAAAGGTTCTGGTAGAGAACAAGTCACATaGCTAAGAAGGTCTTTTAAAGGGCACTCTTGCAGTTTCAGCATT +
Preference number: 5 (lower is better)
Translates to: TSFMLPKGSGREQVT*LRRSFKGHSCSFSI
Trigger: AATGCTGAAACTGCAAGAGTGCCCTTTAAAAGACCTTCTTAGGCATGTGACTTGTTCTCTACCAGAACCTTTGGGCAACATGAAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCTCAGGTCATCTGGATTaGCGCCCAAAGAGCGAGAAA +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWISGHLD*RPKSEK
Trigger: TTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTGA...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGTCAGTCCCACTTTGTaGATGTGGAGGGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIVSPTL*MWRGDV
Trigger: AACATCTCCCCTCCACATCAACAAAGTGGGACTGAC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGGCAATCTGATTCCCTaGAGCAAGCAGCGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIGNLIP*SKQRFQ
Trigger: CTGAAAACGCTGCTTGCTCAAGGGAATCAGATTGCC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCCGCTCCAGTTCAGCCTaGTCTGATTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIRSSSA*SDFCFS
Trigger: GGAAAAGCAGAAATCAGACAAGGCTGAACTGGAGCG...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTCGTTGGAGTTCTTCTaGGACGCGGAGAAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFSLEFF*DAEKGL
Trigger: GAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTGCAGCTGGTTTGCATaGGCCTGGTACTGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLCSWFA*AWYCAS
Trigger: GCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGGCGAAAAACTGAGCTaGGCGAGGAACCTGGTAAAC +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSGEKLS*ARNLVN
Trigger: GTTTACCAGGTTCCTCGCCAAGCTCAGTTTTTCGCC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 90 bp TTATATTGCAGCCTGTACTCCACTGGCTTTATTTTCTCGAAATCTTaGGGCACTTCCGTGACATCTGTGACACTCTCATCATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LYCSLYSTGFIFSKS*GTSVTSVTLSSCFS
Trigger: GGAAAAACATGATGAGAGTGTCACAGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTGCAATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 90 bp ACTTCCGGCAAGATCAACCAAGTGGATCTTACTGACGGTTTCACATaGCATTTCAGAATCAAATTTAGCCTGAGTGAACTTGATGGTGAA +
Preference number: 5 (lower is better)
Translates to: TSGKINQVDLTDGFT*HFRIKFSLSELDGE
Trigger: TTCACCATCAAGTTCACTCAGGCTAAATTTGATTCTGAAATGCCATGTGAAACCGTCAGTAAGATCCACTTGGTTGATCTTGCCGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGTGGTCCGGTTGATATaGCCCGCATCCATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFVVRLI*PASISS
Trigger: AGAACTTATGGATGCGGGCAATATCAACCGGACCAC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGGCAATCTGATTCCCTaGAGCAAGCAGCGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSGNLIP*SKQRFQ
Trigger: CTGAAAACGCTGCTTGCTCAAGGGAATCAGATTGCC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGAGTTCTTTGAGTCGTaGGAGTTCTTCTTGGACGCG +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSEFFES*EFFLDA
Trigger: CGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCGCCTTCTCGTTGTTGTaGAGTTCTTTGAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWIAFSLL*SSLSRW
Trigger: CCAACGACTCAAAGAACTCAACAACAACGAGAAGGC...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCTGGCGTTCTTTATATaGCAGCCTGTACTCCACTGG +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELAFFI*QPVLHW
Trigger: CCAGTGGAGTACAGGCTGCAATATAAAGAACGCCAG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTCGCTCCAGTTCAGCCTaGTCTGATTTCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRSSSA*SDFCFS
Trigger: GGAAAAGCAGAAATCAGACAAGGCTGAACTGGAGCG...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGCCTTCTCGTTGTTGTaGAGTTCTTTGAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFAFSLL*SSLSRW
Trigger: CCAACGACTCAAAGAACTCAACAACAACGAGAAGGC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATCCAAGTTCACTAGCTaGACAAGCTGCCTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSKFTS*TSCLLL
Trigger: CAAGAGAAGGCAGCTTGTCAAGCTAGTGAACTTGGA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGAATTCAAAGGTGGCTaGGAGCTTTTGCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFEFKGG*ELLQLV
Trigger: AACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAAGCTGAACCAGATCTaGCTGGAGCAAGGGATGATT +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSKLNQI*LEQGMI
Trigger: AATCATCCCTTGCTCCAGCAAGATCTGGTTCAGCTT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTGACATTCTGACTGCCTaGAAGATACAATGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFDILTA*KIQWGG
Trigger: ACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTC...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTCTTGGGACGTATGTaGCAGCAAAGTCCAACTGGA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFLGRM*QQSPTG
Trigger: TCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCATTTGGTCCGGGAATaGCACAAGGCTCTGCTTAAA +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFHLVRE*HKALLK
Trigger: TTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAATG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTGCAGTTTCAGCATTaGGTCCGGGAATTGCACAAG +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLQFQH*VRELHK
Trigger: CTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGAGTCACGAGGGACTaGTTAATATTTCCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLRVTRD*LIFPPS
Trigger: GGAAGGGGGAAATATTAACAAGTCCCTCGTGACTCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTATGAAGAACAATATCTaGCTCCGTGGAAGCATCGTC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFMKNNI*LRGSIV
Trigger: GACGATGCTTCCACGGAGCAAGATATTGTTCTTCAT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAAGTTCTTCACGCTGTaGCCTCTCAAATTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSKFFTL*PLKFKS
Trigger: GGACTTGAATTTGAGAGGCAACAGCGTGAAGAACTT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp ATGTTGTCTACATCCAATTTGTCAAGCATGGAAGACTACAGTCATGATTGGATCAGTAAATCCTTTAGCTaGTTCTCGATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MLSTSNLSSMEDYSHDWISKSFS*FSMWKL
Trigger: CAGCTTCCACATCGAGAACAAGCTAAAGGATTTACT...GATCCAATCATGACTGTAGTCTTCCATGCTTGACAAATTGGATGTAGACAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAAGCTGAACCAGATCTaGCTGGAGCAAGGGATGATT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLKLNQI*LEQGMI
Trigger: AATCATCCCTTGCTCCAGCAAGATCTGGTTCAGCTT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTTGATCACATCAAATaGTGCACCCGGAGGAGGTAT +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEFDHIK*CTRRRY
Trigger: ATACCTCCTCCGGGTGCACAATTTGATGTGATCAAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACATTCTGACTGCCTaGAAGATACAATGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLDILTA*KIQWGG
Trigger: ACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGTCACGACACAGCTGTaGAGAGAGGTATTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEVTTQL*REVFVV
Trigger: TACAACAAATACCTCTCTCAACAGCTGTGTCGTGAC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 90 bp TTTTTCTTTTCTGGAACAACAACACACCTGAATTCACTTAAAGCATaGCATTTGATCACATCAAATTGTGCACCCGGAGGAGGTATGTTT +
Preference number: 5 (lower is better)
Translates to: FFFSGTTTHLNSLKA*HLITSNCAPGGGMF
Trigger: AAACATACCTCCTCCGGGTGCACAATTTGATGTGATCAAATGCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGTTCCAGAAAAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTCTGTGCCGAGGGTTTaGAAAACCATTTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFSVPRV*KTISCE
Trigger: TTCACAAGAAATGGTTTTCAAAACCCTCGGCACAGA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACGGATAAGTTTGACGTaGGCATCCTCATTAATGGTA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSRISLT*ASSLMV
Trigger: TACCATTAATGAGGATGCCAACGTCAAACTTATCCG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTAGCTCACGGATAAGTTaGACGTTGGCATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSSRIS*TLASSL
Trigger: TAATGAGGATGCCAACGTCAAACTTATCCGTGAGCT...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAGTAAATCCTTTAGCTaGTTCTCGATGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSSKSFS*FSMWKL
Trigger: CAGCTTCCACATCGAGAACAAGCTAAAGGATTTACT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCAGCCTTCTCGTTGTaGTTGAGTTCTTTGAGTCGT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSAFSL*LSSLSR
Trigger: ACGACTCAAAGAACTCAACAACAACGAGAAGGCTGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATTCTCAGCCTTCTCGTaGTTGTTGAGTTCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSFSAFS*LLSSLS
Trigger: ACTCAAAGAACTCAACAACAACGAGAAGGCTGAGAA...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTTCATCTTTTTCCTTTaGGAGCTGGTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFFIFFL*ELVQFL
Trigger: CAAGAACTGGACCAGCTCCAAAAGGAAAAAGATGAA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTTATTTTCTCGAAATCTaGAGGCACTTCCGTGACATC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFYFLEI*RHFRDI
Trigger: GATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATA...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTTCTTCCAACAGAGTaGGCAAGTGATTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFLPTE*ASDSAG
Trigger: TCCTGCAGAATCACTTGCCAACTCTGTTGGAAGAAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCCCATGATGATCTTTTaGAACACCATCGACCTCATA +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFPMMIF*NTIDLI
Trigger: TATGAGGTCGATGGTGTTCAAAAAGATCATCATGGG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAACACCTGAACTCCATTaGGCAAAACTAAATCAGGGA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSTPELH*AKLNQG
Trigger: TCCCTGATTTAGTTTTGCCAAATGGAGTTCAGGTGT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTACACCTGAACTCCATTaGGCAAAACTAAATCAGGGA +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFTPELH*AKLNQG
Trigger: TCCCTGATTTAGTTTTGCCAAATGGAGTTCAGGTGT...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTTGATCACATCAAATaGTGCACCCGGAGGAGGTAT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFDHIK*CTRRRY
Trigger: ATACCTCCTCCGGGTGCACAATTTGATGTGATCAAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAGAACCCACTGAAGGTTaGAGTTTCTGTAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSEPTEG*SFCKKT
Trigger: AGTCTTCTTACAGAAACTCAAACCTTCAGTGGGTTC...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGGAACCCACTGAAGGTTaGAGTTTCTGTAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEEPTEG*SFCKKT
Trigger: AGTCTTCTTACAGAAACTCAAACCTTCAGTGGGTTC...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAAAGTCCAACTGGACTaGACTCTCAAGCCATGTTTA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSKVQLD*TLKPCL
Trigger: TAAACATGGCTTGAGAGTCAAGTCCAGTTGGACTTT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCCAAAGCATATAAAGTaGACTGAAGCAGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFPKHIK*TEAGAN
Trigger: GTTTGCTCCTGCTTCAGTCAACTTTATATGCTTTGG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGTAAGGCACGAAAACTaGCTTCTTCTTTGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLVRHEN*LLLCKS
Trigger: ACTCTTGCAAAGAAGAAGCAAGTTTTCGTGCCTTAC...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATTTATAGACACTTCTaGGGACGTATGTTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEIYRHF*GRMLQQ
Trigger: TTGCTGCAACATACGTCCCAAGAAGTGTCTATAAAT...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGCATGAAAAATGCTCATaGAGCCGAGATTATCTGACA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTEHEKCS*SRDYLT
Trigger: TGTCAGATAATCTCGGCTCAATGAGCATTTTTCATG...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTCACGGACTCTCAAATaGAAGGTTTTAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLSRTLK*KVLDDF
Trigger: GAAGTCATCTAAAACCTTCAATTTGAGAGTCCGTGA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTAATGGTAGGCTTGTaGATGATGTTTTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELMVGL*MMFLAL
Trigger: TAGAGCCAAAAACATCATCAACAAGCCTACCATTAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTCCTTGGTCAATTCTaGAACTCTTGCTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFLGQF*NSCFIL
Trigger: CAGAATGAAGCAAGAGTTCAAGAATTGACCAAGGAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TTCAATTTTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGTTAAAGCGAAACATATaGGTTCTTCCCAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: FNFRGLHFSSSNSISYTELKRNI*VLPKRI
Trigger: GATTCTCTTGGGAAGAACCAATATGTTTCGCTTTAA...CTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAAAATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTGTTGTTGAGTTCTTaGAGTCGTTGGAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLLLLSS*SRWSSS
Trigger: AGAAGAACTCCAACGACTCAAAGAACTCAACAACAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS-3UTR CAA 90 bp CCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTGACTGTTTTCTTAAAGCATGGCATTaGATCACATCAAATTGTGCA +
Preference number: 5 (lower is better)
Translates to: PVPIQLATRRYSYCLDCFLKAWH*ITSNCA
Trigger: TGCACAATTTGATGTGATCAAATGCCATGCTTTAAG...AAAACAGTCAAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCACTTAAAGCATGGCATTaGATCACATCAAATTGTGCA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSLKAWH*ITSNCA
Trigger: TGCACAATTTGATGTGATCAAATGCCATGCTTTAAG...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS-3UTR CAA 90 bp TTAGAGGTCTGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCAAAATATCCCAGTCCATaGTTTCCTTCTGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: LEVCIFPVPIQLATRRYSKYPSP*FPSVLI
Trigger: TATCAGAACAGAAGGAAACAATGGACTGGGATATTT...TGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCAGACCTCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS-3UTR CAA 90 bp TGCATTTTTCCAGTTCCAATTCAATTAGCTACACGGAGATATTCATATTGCCTTTTTTCCAGTTCAAGCTaGGCATACTGTTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: CIFPVPIQLATRRYSYCLFSSSS*AYCSSF
Trigger: AAAAGATGAACAGTATGCCAAGCTTGAACTGGAAAA...AAGGCAATATGAATATCTCCGTGTAGCTAATTGAATTGGAACTGGAAAAATGCA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS CCA 72 bp CCCACTAGCCCAGAACTCCGCGGTCGCCGGCGACGCTaGCTACTCAGATCGCGGCTCCCGCCCACTTCCCTC +
Preference number: 6 (lower is better)
Translates to: PTSPELRGRRRR*LLRSRLPPTSL
Trigger: GAGGGAAGTGGGCGGGAGCCGCGATCTGAGTAGCCAGCGTCGCCGGCGACCGCGGAGTTCTGGGCTAGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 72 bp CCCTGCGATTCATGGGCCGGACCCTCACGGCCACCTTaGCCGATGCCATCGCTCATCCCGAACCAGCCCGCG +
Preference number: 6 (lower is better)
Translates to: PCDSWAGPSRPP*PMPSLIPNQPA
Trigger: CGCGGGCTGGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGTCCGGCCCATGAATCGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp GTAAGGCGCCGCACCCTCTGCTGGCCTCAGGCTCCCTaGAGCTTCGCTCTCGCTGCTGCCAACCCGAGCTTC +
Preference number: 6 (lower is better)
Translates to: VRRRTLCWPQAP*SFALAAANPSF
Trigger: GAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCGCCTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp AAAGACAGAGGCCCGGTAAGGCGCCGCACCCTCTGCTaGCCTCAGGCTCCCTGCAGCTTCGCTCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: KDRGPVRRRTLC*PQAPCSFALAA
Trigger: AGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAGCAGAGGGTGCGGCGCCTTACCGGGCCTCTGTCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 72 bp TCCCTGCGATTCATGGGCCGGACCCTCACGGCCACCTaGACCGATGCCATCGCTCATCCCGAACCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: SLRFMGRTLTAT*TDAIAHPEPAR
Trigger: GCGGGCTGGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp AAGTCCTTTTCCCTGCGATTCATGGGCCGGACCCTCACGGCCACCTaGACCGATGCCATCGCTCATCCCGAACCAGCCCGCGCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: KSFSLRFMGRTLTAT*TDAIAHPEPARAGS
Trigger: GGACCCCGCGCGGGCTGGTTCGGGATGAGCGATGGCATCGGTCAAGGTGGCCGTGAGGGTCCGGCCCATGAATCGCAGGGAAAAGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp TGCCCTGCATCGGAGCCCGCTTCGACGAGAAGGCACTaGTGTGGTGGTTCCTCCATCACCCCTGGCTCTACC +
Preference number: 6 (lower is better)
Translates to: CPASEPASTRRH*CGGSSITPGST
Trigger: GGTAGAGCCAGGGGTGATGGAGGAACCACCACAGCAGTGCCTTCTCGTCGAAGCGGGCTCCGATGCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000636835.1
CDS GCA 72 bp TGTACCTCCCCACGCCGCAGGAGCTGGATCATCTCCTaGTTCTCTCGGAGCTGCTCTTCCAGATGGGCCACG +
Preference number: 6 (lower is better)
Translates to: CTSPRRRSWIIS*FSRSCSSRWAT
Trigger: CGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCTGCGGCGTGGGGAGGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp CGCAGGAGCTGGATCATCTCCTGCTTCTCTCGGAGCTaGTCTTCCAGATGGGCCACGAGCATGACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RRSWIISCFSRS*SSRWATSMTCS
Trigger: GGAGCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGATCCAGCTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp TCCAGCCTGGCCAGGGCCCGCTCCAGCGCCTCTCTCTaGTGCTTCTCTCTGGACTCCAAAATCTCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: SSLARARSSASL*CFSLDSKISFS
Trigger: GGAAAAGGAGATTTTGGAGTCCAGAGAGAAGCAGCAGAGAGAGGCGCTGGAGCGGGCCCTGGCCAGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp TGCTCTTCAATCTCCATGCCCAGGGTGGAGTGCCTCTaGAGCGCAGAATGTCTCCTCTCCAGCCTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: CSSISMPRVECL*SAECLLSSLAR
Trigger: CCTGGCCAGGCTGGAGAGGAGACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp CTGGCCTCAGGCTCCCTGCAGCTTCGCTCTCGCTGCTaGCAACCCGAGCTTCCGGAGAATGAGATTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LASGSLQLRSRC*QPELPENEILL
Trigger: CAACAGAATCTCATTCTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGAAGCTGCAGGGAGCCTGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 72 bp TCGGGGCACACAGATTCCCCACAAGCCTGGCTTGGCTaGTCACCTTTGTGCCAGCCTGAAGCAGGTGACTGC +
Preference number: 6 (lower is better)
Translates to: SGHTDSPQAWLG*SPLCQPEAGDC
Trigger: GCAGTCACCTGCTTCAGGCTGGCACAAAGGTGATCAGCCAAGCCAGGCTTGTGGGGAATCTGTGTGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp CTGCGGCGTTTGAGGCTCTCCTCCTGCTTGCGAATCTaGAGCTGCACGATTTCTGTCTCCTTGCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LRRLRLSSCLRI*SCTISVSLRWV
Trigger: GACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp CGTTTGAGGCTCTCCTCCTGCTTGCGAATCTGGAGCTaGACGATTTCTGTCTCCTTGCGCTGGGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: RLRLSSCLRIWS*TISVSLRWVST
Trigger: GGTGGAGACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp CTCAGACGCCAGTACGCTCTGCGGGGCACTGCAGGATaGTCTCTCCTCATGGGAAATGCCTTCAGACAGAAC +
Preference number: 6 (lower is better)
Translates to: LRRQYALRGTAG*SLLMGNAFRQN
Trigger: GTTCTGTCTGAAGGCATTTCCCATGAGGAGAGAGCATCCTGCAGTGCCCCGCAGAGCGTACTGGCGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp ATCATCTCCTGCTTCTCTCGGAGCTGCTCTTCCAGATaGGCCACGAGCATGACCTGCTCCTTCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: IISCFSRSCSSR*ATSMTCSFSCS
Trigger: GGAGCAGGAGAAGGAGCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGAAGCAGGAGATGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp TTGTTCTCGATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTaGCGAATCTGGAGCTGCACGATTTCTGTCTCCTTGCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LFSMWKLRRLRLSSC*RIWSCTISVSLRWV
Trigger: GACCCAGCGCAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS TCA 72 bp TCTCACGGGACTTCGAGAGGTCGGTCATGGACAAGCTaGAGGAGGACAGAAGGCCACTCTTCCTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SHGTSRGRSWTS*RRTEGHSSSSP
Trigger: GGGAGAAGAGGAAGAGTGGCCTTCTGTCCTCCTTCAGCTTGTCCATGACCGACCTCTCGAAGTCCCGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp TCGATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTaGTTGCGAATCTGGAGCTGCACGATTTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SMWKLRRLRLSS*LRIWSCTISVS
Trigger: GGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp GACTGGCAAGTTTCTGCCTCTGCTCTTCAATCTCCATaGCCAGGGTGGAGTGCCTCTGCAGCGCAGAATGTC +
Preference number: 6 (lower is better)
Translates to: DWQVSASALQSP*PGWSASAAQNV
Trigger: GACATTCTGCGCTGCAGAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp CTGCTGCCACTGTTCAGACTGGCAAGTTTCTGCCTCTaGTCTTCAATCTCCATGCCCAGGGTGGAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: LLPLFRLASFCL*SSISMPRVECL
Trigger: GAGGCACTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCTGAACAGTGGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp CTGAAGCAGGAGCAAACACGCTGGTTGAGGGTCAGGTaGTGTGCAGGCAGCAACAGCAAGCCAGTAAATGCC +
Preference number: 6 (lower is better)
Translates to: LKQEQTRWLRVR*CAGSNSKPVNA
Trigger: GGCATTTACTGGCTTGCTGTTGCTGCCTGCACAGCACCTGACCCTCAACCAGCGTGTTTGCTCCTGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 72 bp CCTTTAGCTTGTTCTCGATGTGGAAGCTGCGGCGTTTaGGGCTCTCCTCCTGCTTGCGAATCTGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLACSRCGSCGV*GSPPACESGAA
Trigger: TGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS TCA 72 bp TCTCTCGGAGCTGCTCTTCCAGATGGGCCACGAGCATaGCCTGCTCCTTCTCCTGCTCCTCTAGTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: SLGAALPDGPRA*PAPSPAPLVSF
Trigger: AAAAGAGACTAGAGGAGCAGGAGAAGGAGCAGGTCATGCTCGTGGCCCATCTGGAAGAGCAGCTCCGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 72 bp TCGCTCTCGCTGCTGCCAACCCGAGCTTCCGGAGAATaGGATTCTGTTGACTGCATGTCAGTCTTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: SLSLLPTRASGE*DSVDCMSVFKG
Trigger: GCCCTTGAAGACTGACATGCAGTCAACAGAATCTCATTCTCCGGAAGCTCGGGTTGGCAGCAGCGAGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 72 bp ATGAGACCTGCTACTGACGTCGTTCATCCCAGTCGCTaGGGTGGTCCGGTTGATATTGCCCGCATCCATAAG +
Preference number: 6 (lower is better)
Translates to: MRPATDVVHPSR*GGPVDIARIHK
Trigger: CTTATGGATGCGGGCAATATCAACCGGACCACCGCAGCGACTGGGATGAACGACGTCAGTAGCAGGTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp ATTTCTGTCTCCTTGCGCTGGGTCTCCACCTCCTGCTaGATCCGCTCCAGTTCAGCCTTGTCTGATTTCTGC +
Preference number: 6 (lower is better)
Translates to: ISVSLRWVSTSC*IRSSSALSDFC
Trigger: GCAGAAATCAGACAAGGCTGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp ACGATTTCTGTCTCCTTGCGCTGGGTCTCCACCTCCTaGTGCATCCGCTCCAGTTCAGCCTTGTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: TISVSLRWVSTS*CIRSSSALSDF
Trigger: GAAATCAGACAAGGCTGAACTGGAGCGGATGCAGCAGGAGGTGGAGACCCAGCGCAAGGAGACAGAAATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp TGCTCTCTGCTGCCACTGTTCAGACTGGCAAGTTTCTaGCTCTGCTCTTCAATCTCCATGCCCAGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CSLLPLFRLASF*LCSSISMPRVE
Trigger: CTCCACCCTGGGCATGGAGATTGAAGAGCAGAGGCAGAAACTTGCCAGTCTGAACAGTGGCAGCAGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 72 bp ATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTaGCGAATCTGGAGCTGCACGATTTCTGTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MWKLRRLRLSSC*RIWSCTISVSL
Trigger: CAAGGAGACAGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 72 bp TCCTTTAGCTTGTTCTCGATGTGGAAGCTGCGGCGTTaGAGGCTCTCCTCCTGCTTGCGAATCTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SFSLFSMWKLRR*RLSSCLRIWSC
Trigger: GCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp GACAGAACCAAGCAGAGCACCTTGCCTTGCCTGGCCTaGTTGCCTCCGCTATTTATAGACACTTCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: DRTKQSTLPCLA*LPPLFIDTSWD
Trigger: GTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 72 bp TATAAAACTCAGACGCCAGTACGCTCTGCGGGGCACTaGAGGATGCTCTCTCCTCATGGGAAATGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: YKTQTPVRSAGH*RMLSPHGKCLQ
Trigger: CTGAAGGCATTTCCCATGAGGAGAGAGCATCCTGCAGTGCCCCGCAGAGCGTACTGGCGTCTGAGTTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp ACCAGTGCAATGTGGGTGTTCAGAAGGACTAGCGACTaGCACTGGTCATGGCCAGAGTCACCCATGACTTTC +
Preference number: 6 (lower is better)
Translates to: TSAMWVFRRTSD*HWSWPESPMTF
Trigger: GAAAGTCATGGGTGACTCTGGCCATGACCAGTGCCAGTCGCTAGTCCTTCTGAACACCCACATTGCACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 72 bp CTGACGTCGTTCATCCCAGTCGCTGCGGTGGTCCGGTaGATATTGCCCGCATCCATAAGTTCTTCTACGTCA +
Preference number: 6 (lower is better)
Translates to: LTSFIPVAAVVR*ILPASISSSTS
Trigger: TGACGTAGAAGAACTTATGGATGCGGGCAATATCAACCGGACCACCGCAGCGACTGGGATGAACGACGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp CCTTCAGACAGAACCAAGCAGAGCACCTTGCCTTGCCTGGCCTGCTaGCCTCCGCTATTTATAGACACTTCTTGGGACGTATGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: PSDRTKQSTLPCLAC*PPLFIDTSWDVCCS
Trigger: GCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 72 bp ACGCGGAGAAAGGTCTCTTCTTCTTGTCTCTTCTTCTaGAGCTCGATTTCCTGCTGTTCCCTCAGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: TRRKVSSSCLFF*SSISCCSLSLS
Trigger: GGAGAGGCTGAGGGAACAGCAGGAAATCGAGCTGCAGAAGAAGAGACAAGAAGAAGAGACCTTTCTCCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS GCA 72 bp ATGCCTTCAGACAGAACCAAGCAGAGCACCTTGCCTTaGCTGGCCTGCTTGCCTCCGCTATTTATAGACACT +
Preference number: 6 (lower is better)
Translates to: MPSDRTKQSTLP*LACLPPLFIDT
Trigger: AGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp GTATGTTTCGAGAGAGTCAGTCCCACTTTGTTGATGTaGAGGGGAGATGTTGCGGACTGGAGCATCACGCTG +
Preference number: 6 (lower is better)
Translates to: VCFERVSPTLLM*RGDVADWSITL
Trigger: CAGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGGACTGACTCTCTCGAAACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CAA 90 bp CTCATGGGAAATGCCTTCAGACAGAACCAAGCAGAGCACCTTGCCTaGCCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: LMGNAFRQNQAEHLA*PGLLASAIYRHFLG
Trigger: TCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGGCATTTCCCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp CTCTCCTCATGGGAAATGCCTTCAGACAGAACCAAGCAGAGCACCTaGCCTTGCCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCT +
Preference number: 6 (lower is better)
Translates to: LSSWEMPSDRTKQST*PCLACLPPLFIDTS
Trigger: AGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAGGTGCTCTGCTTGGTTCTGTCTGAAGGCATTTCCCATGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp GCAAGTAAATCCTTTAGCTTGTTCTCGATGTGGAAGCTGCGGCGTTaGAGGCTCTCCTCCTGCTTGCGAATCTGGAGCTGCACGATTTCT +
Preference number: 6 (lower is better)
Translates to: ASKSFSLFSMWKLRR*RLSSCLRIWSCTIS
Trigger: AGAAATCGTGCAGCTCCAGATTCGCAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS TCA 72 bp AGCATTGATCCTGGCATCCATGAGGGGAACCAGGTGTaGTTTTTCAGCACTGACTGGCAAGCTGGAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SIDPGIHEGNQV*FFSTDWQAGRS
Trigger: GCTTCTTCCAGCTTGCCAGTCAGTGCTGAAAAATCACACCTGGTTCCCCTCATGGATGCCAGGATCAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000408042.5
CDS GCA 72 bp CCTCTCAAATTCAAGTCCGGGGTTATACAACATGACTaGAGACAGGTTCTCACGGGACTTCGAGAGGTCGGT +
Preference number: 6 (lower is better)
Translates to: PLKFKSGVIQHD*RQVLTGLREVG
Trigger: ACCGACCTCTCGAAGTCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCGGACTTGAATTTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp CCCACTTTGTTGATGTGGAGGGGAGATGTTGCGGACTaGAGCATCACGCTGAAAAAGTCCCTGAGGTATTTC +
Preference number: 6 (lower is better)
Translates to: PTLLMWRGDVAD*SITLKKSLRYF
Trigger: GAAATACCTCAGGGACTTTTTCAGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 72 bp TTCTCCGCAAGTAAATCCTTTAGCTTGTTCTCGATGTaGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FSASKSFSLFSM*KLRRLRLSSCL
Trigger: CAAGCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTGCGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 90 bp GGTGAAAACTCACAAATGGTATGTTTCGAGAGAGTCAGTCCCACTTaGTTGATGTGGAGGGGAGATGTTGCGGACTGGAGCATCACGCTG +
Preference number: 6 (lower is better)
Translates to: GENSQMVCFERVSPT*LMWRGDVADWSITL
Trigger: CAGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGGACTGACTCTCTCGAAACATACCATTTGTGAGTTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CAA 90 bp CTGACGTGCAATGTTGGCAGTGAATTCAAAGGTGGCTTGGAGCTTTaGCAGCTGGTTTGCATTGGCCTGGTACTGTGCAAGCTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LTCNVGSEFKGGLEL*QLVCIGLVLCKLFF
Trigger: GAAGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGCCAACATTGCACGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp CTTGCCTTGCCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTaGGGACGTATGTTGCAGCAAAGTCCAACTGGACTTGACTCTCAA +
Preference number: 6 (lower is better)
Translates to: LALPGLLASAIYRHF*GRMLQQSPTGLDSQ
Trigger: TTGAGAGTCAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGGCAAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 72 bp GTTGCCTCTCAAATTCAAGTCCGGGGTTATACAACATaGCTGCAGACAGGTTCTCACGGGACTTCGAGAGGT +
Preference number: 6 (lower is better)
Translates to: VASQIQVRGYTT*LQTGSHGTSRG
Trigger: ACCTCTCGAAGTCCCGTGAGAACCTGTCTGCAGTCATGTTGTATAACCCCGGACTTGAATTTGAGAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 72 bp CTAGCGACTGGCACTGGTCATGGCCAGAGTCACCCATaGCTTTCACTGTTGTGTAGAGCAGTAACTGAACTT +
Preference number: 6 (lower is better)
Translates to: LATGTGHGQSHP*LSLLCRAVTEL
Trigger: AAGTTCAGTTACTGCTCTACACAACAGTGAAAGTCATGGGTGACTCTGGCCATGACCAGTGCCAGTCGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS GCA 72 bp ATGTTGGCAGTGAATTCAAAGGTGGCTTGGAGCTTTTaGAGCTGGTTTGCATTGGCCTGGTACTGTGCAAGC +
Preference number: 6 (lower is better)
Translates to: MLAVNSKVAWSF*SWFALAWYCAS
Trigger: GCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp CCCGCAGAGGACGTAGCGTGGGATACTAATTTTAATTaGGTCCTTCAGGTCATCTGGATTTGCGCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: PAEDVAWDTNFN*VLQVIWICAQR
Trigger: TCTTTGGGCGCAAATCCAGATGACCTGAAGGACCCAATTAAAATTAGTATCCCACGCTACGTCCTCTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 72 bp GTGTGCATCCTTTCCTTGCCCGCAGAGGACGTAGCGTaGGATACTAATTTTAATTGGGTCCTTCAGGTCATC +
Preference number: 6 (lower is better)
Translates to: VCILSLPAEDVA*DTNFNWVLQVI
Trigger: GATGACCTGAAGGACCCAATTAAAATTAGTATCCCACGCTACGTCCTCTGCGGGCAAGGAAAGGATGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 72 bp GCAGTGAATTCAAAGGTGGCTTGGAGCTTTTGCAGCTaGTTTGCATTGGCCTGGTACTGTGCAAGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: AVNSKVAWSFCS*FALAWYCASCS
Trigger: AGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp CTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTTaGGACGTATGTTGCAGCAAAGTCCAACTGGACTTG +
Preference number: 6 (lower is better)
Translates to: LACLPPLFIDTS*DVCCSKVQLDL
Trigger: CAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 72 bp CCTGGCCTGCTTGCCTCCGCTATTTATAGACACTTCTaGGGACGTATGTTGCAGCAAAGTCCAACTGGACTT +
Preference number: 6 (lower is better)
Translates to: PGLLASAIYRHF*GRMLQQSPTGL
Trigger: AAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp CTCTCCTCTTCAAATTTTTCCTTCTCCGCAAGTAAATCCTTTAGCTaGTTCTCGATGTGGAAGCTGCGGCGTTTGAGGCTCTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LSSSNFSFSASKSFS*FSMWKLRRLRLSSC
Trigger: GCAGGAGGAGAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTGCGGAGAAGGAAAAATTTGAAGAGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 90 bp TGCTCATTGAGCCGAGATTATCTGACAGGACCAAAGCATATAAAGTaGACTGAAGCAGGAGCAAACACGCTGGTTGAGGGTCAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CSLSRDYLTGPKHIK*TEAGANTLVEGQVL
Trigger: CAGCACCTGACCCTCAACCAGCGTGTTTGCTCCTGCTTCAGTCAACTTTATATGCTTTGGTCCTGTCAGATAATCTCGGCTCAATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp ATCAGGCTCTGGCATCAGGACACACAGGAGGTCACGACACAGCTGTaGAGAGAGGTATTTGTTGTAACTGAATACAGTGAGCAGAAGACC +
Preference number: 6 (lower is better)
Translates to: IRLWHQDTQEVTTQL*REVFVVTEYSEQKT
Trigger: GGTCTTCTGCTCACTGTATTCAGTTACAACAAATACCTCTCTCAACAGCTGTGTCGTGACCTCCTGTGTGTCCTGATGCCAGAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 72 bp AAATGGTATGTTTCGAGAGAGTCAGTCCCACTTTGTTaGTGTGGAGGGGAGATGTTGCGGACTGGAGCATCA +
Preference number: 6 (lower is better)
Translates to: KWYVSRESVPLC*CGGEMLRTGAS
Trigger: TGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGGACTGACTCTCTCGAAACATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS GCA 72 bp GGGCACTCTTGCAGTTTCAGCATTTGGTCCGGGAATTaGACAAGGCTCTGCTTAAATGCAGAGCTCTTTCTA +
Preference number: 6 (lower is better)
Translates to: GHSCSFSIWSGN*TRLCLNAELFL
Trigger: TAGAAAGAGCTCTGCATTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAAGAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 72 bp CTCAGCCTTCTCGTTGTTGTTGAGTTCTTTGAGTCGTaGGAGTTCTTCTTGGACGCGGAGAAAGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LSLLVVVEFFES*EFFLDAEKGLF
Trigger: GAAGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTCAACAACAACGAGAAGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 72 bp AATGTTGGCAGTGAATTCAAAGGTGGCTTGGAGCTTTaGCAGCTGGTTTGCATTGGCCTGGTACTGTGCAAG +
Preference number: 6 (lower is better)
Translates to: NVGSEFKGGLEL*QLVCIGLVLCK
Trigger: CTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGAATTCACTGCCAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp GAAAACTCACAAATGGTATGTTTCGAGAGAGTCAGTCCCACTTTGTaGATGTGGAGGGGAGATGTTGCGGACTGGAGCATCACGCTGAAA +
Preference number: 6 (lower is better)
Translates to: ENSQMVCFERVSPTL*MWRGDVADWSITLK
Trigger: TTTCAGCGTGATGCTCCAGTCCGCAACATCTCCCCTCCACATCAACAAAGTGGGACTGACTCTCTCGAAACATACCATTTGTGAGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CAA 90 bp GCTGGAAGAAGCCACCTTCCCTTCCAGGGTCCCATGATGATCTTTTaGAACACCATCGACCTCATAAATCTTCTGTTTCAGCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: AGRSHLPFQGPMMIF*NTIDLINLLFQLLD
Trigger: ATCCAGCAGCTGAAACAGAAGATTTATGAGGTCGATGGTGTTCAAAAAGATCATCATGGGACCCTGGAAGGGAAGGTGGCTTCTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000408042.5
CDS CAA 90 bp GGCCTGCTTGCCTCCGCTATTTATAGACACTTCTTGGGACGTATGTaGCAGCAAAGTCCAACTGGACTTGACTCTCAAGCCATGTTTATC +
Preference number: 6 (lower is better)
Translates to: GLLASAIYRHFLGRM*QQSPTGLDSQAMFI
Trigger: GATAAACATGGCTTGAGAGTCAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAGAAGTGTCTATAAATAGCGGAGGCAAGCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp AGCCTTCTCGTTGTTGTTGAGTTCTTTGAGTCGTTGGAGTTCTTCTaGGACGCGGAGAAAGGTCTCTTCTTCTTGTCTCTTCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLLVVVEFFESLEFF*DAEKGLFFLSLLLQ
Trigger: CTGCAGAAGAAGAGACAAGAAGAAGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTCAACAACAACGAGAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 90 bp ATTGAAAGTAAGTTTCCAGACCTCAGGTGCGACATTCTGACTGCCTaGAAGATACAATGGGGTGGTGAACAACTGGACATTTGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: IESKFPDLRCDILTA*KIQWGGEQLDIWGF
Trigger: GAAGCCCCAAATGTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAACTTACTTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS GCA 72 bp GTCACATGCCTAAGAAGGTCTTTTAAAGGGCACTCTTaGAGTTTCAGCATTTGGTCCGGGAATTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: VTCLRRSFKGHS*SFSIWSGNCTR
Trigger: CCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAAGAGTGCCCTTTAAAAGACCTTCTTAGGCATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp TGGGATACTAATTTTAATTGGGTCCTTCAGGTCATCTaGATTTGCGCCCAAAGAGCGAGAAACCATCCGCTC +
Preference number: 6 (lower is better)
Translates to: WDTNFNWVLQVI*ICAQRARNHPL
Trigger: GAGCGGATGGTTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTGAAGGACCCAATTAAAATTAGTATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 72 bp CCAAGTCAAGGCCATGAAGAACAATATCTTGCTCCGTaGAAGCATCGTCTCTACCAACGTATGTCTGACCTT +
Preference number: 6 (lower is better)
Translates to: PSQGHEEQYLAP*KHRLYQRMSDL
Trigger: AAGGTCAGACATACGTTGGTAGAGACGATGCTTCCACGGAGCAAGATATTGTTCTTCATGGCCTTGACTTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp TTCCTCTTCTCCCTGAGCTTGGCGGCTTCCTTTGGATaGTTAAAGCGAAACATATTGGTTCTTCCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: FLFSLSLAASFG*LKRNILVLPKR
Trigger: TCTCTTGGGAAGAACCAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp ACTCTTCCTCTTCTCCCTGAGCTTGGCGGCTTCCTTTaGATGGTTAAAGCGAAACATATTGGTTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: TLPLLPELGGFL*MVKAKHIGSSQ
Trigger: TTGGGAAGAACCAATATGTTTCGCTTTAACCATCCAAAGGAAGCCGCCAAGCTCAGGGAGAAGAGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp TCAGCCTTCTCGTTGTTGTTGAGTTCTTTGAGTCGTTaGAGTTCTTCTTGGACGCGGAGAAAGGTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SAFSLLLSSLSR*SSSWTRRKVSS
Trigger: AGAAGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTCAACAACAACGAGAAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CCA 72 bp CAAAGGTGGCTTGGAGCTTTTGCAGCTGGTTTGCATTaGCCTGGTACTGTGCAAGCTGTTCTTCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QRWLGAFAAGLH*PGTVQAVLLFL
Trigger: AAGAAAAAGAAGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp TTGAAGATACAATGGGGTGGTGAACAACTGGACATTTaGGGCTTCCTGAAGGTGCTCAGGTGGACTATTTCT +
Preference number: 6 (lower is better)
Translates to: LKIQWGGEQLDI*GFLKVLRWTIS
Trigger: AGAAATAGTCCACCTGAGCACCTTCAGGAAGCCCCAAATGTCCAGTTGTTCACCACCCCATTGTATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 72 bp AATCTTGACCTCAAACTCGAAGTGTGCATCCTTTCCTaGCCCGCAGAGGACGTAGCGTGGGATACTAATTTT +
Preference number: 6 (lower is better)
Translates to: NLDLKLEVCILS*PAEDVAWDTNF
Trigger: AAAATTAGTATCCCACGCTACGTCCTCTGCGGGCAAGGAAAGGATGCACACTTCGAGTTTGAGGTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CAA 72 bp AGTCTGGCTATTTCAGCTCGCAGCTCACGGATAAGTTaGACGTTGGCATCCTCATTAATGGTAGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SLAISARSSRIS*TLASSLMVGLL
Trigger: CAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTTATCCGTGAGCTGCGAGCTGAAATAGCCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 72 bp CAGCCTGTACTCCACTGGCTTTATTTTCTCGAAATCTaGAGGCACTTCCGTGACATCTGTGACACTCTCATC +
Preference number: 6 (lower is better)
Translates to: QPVLHWLYFLEI*RHFRDICDTLI
Trigger: GATGAGAGTGTCACAGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 72 bp TCAAAGGTGGCTTGGAGCTTTTGCAGCTGGTTTGCATaGGCCTGGTACTGTGCAAGCTGTTCTTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SKVAWSFCSWFA*AWYCASCSSFS
Trigger: AGAAAAAGAAGAACAGCTTGCACAGTACCAGGCCAATGCAAACCAGCTGCAAAAGCTCCAAGCCACCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 72 bp AAGTTTCCAGACCTCAGGTGCGACATTCTGACTGCCTaGAAGATACAATGGGGTGGTGAACAACTGGACATT +
Preference number: 6 (lower is better)
Translates to: KFPDLRCDILTA*KIQWGGEQLDI
Trigger: AATGTCCAGTTGTTCACCACCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 72 bp AGCCGAGATTATCTGACAGGACCAAAGCATATAAAGTaGACTGAAGCAGGAGCAAACACGCTGGTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: SRDYLTGPKHIK*TEAGANTLVEG
Trigger: ACCCTCAACCAGCGTGTTTGCTCCTGCTTCAGTCAACTTTATATGCTTTGGTCCTGTCAGATAATCTCGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 90 bp CTGAAACTTCTCAGCCTTCTCGTTGTTGTTGAGTTCTTTGAGTCGTaGGAGTTCTTCTTGGACGCGGAGAAAGGTCTCTTCTTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LKLLSLLVVVEFFES*EFFLDAEKGLFFLS
Trigger: AGACAAGAAGAAGAGACCTTTCTCCGCGTCCAAGAAGAACTCCAACGACTCAAAGAACTCAACAACAACGAGAAGGCTGAGAAGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 90 bp ACTGCAGCCTTCACTAATCACACGATGCAAATCCTGAAGGCGTCTTaGGACTTCTTCTTCAATGTAAGCATTGATCCTGGCATCCATGAG +
Preference number: 6 (lower is better)
Translates to: TAAFTNHTMQILKAS*DFFFNVSIDPGIHE
Trigger: CTCATGGATGCCAGGATCAATGCTTACATTGAAGAAGAAGTCCAAAGACGCCTTCAGGATTTGCATCGTGTGATTAGTGAAGGCTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000408042.5
CDS CAA 90 bp ACTGCAGCCTTCACTAATCACACGATGCAAATCCTGAAGGCGTCTTaGGACTTCTTCTTCAATGTAAGCATTGATCCTCTCCTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: TAAFTNHTMQILKAS*DFFFNVSIDPLLVL
Trigger: AAGGACCAGGAGAGGATCAATGCTTACATTGAAGAAGAAGTCCAAAGACGCCTTCAGGATTTGCATCGTGTGATTAGTGAAGGCTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636835.1
CDS TCA 72 bp CCGTCCCGTGGCTGCTGTAGTCAAAGACTCCTTTCTTaGAGAATGGTGAAAACTCACAAATGGTATGTTTCG +
Preference number: 6 (lower is better)
Translates to: PSRGCCSQRLLS*RMVKTHKWYVS
Trigger: CGAAACATACCATTTGTGAGTTTTCACCATTCTTCAAGAAAGGAGTCTTTGACTACAGCAGCCACGGGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS TCA 72 bp AAGCTTCATCCCATCTGGTGGTTTCATTTATCCGACTaGAGAGTCCTTCACAGATCCGAGGTATTAAGCCAG +
Preference number: 6 (lower is better)
Translates to: KLHPIWWFHLSD*RVLHRSEVLSQ
Trigger: CTGGCTTAATACCTCGGATCTGTGAAGGACTCTTCAGTCGGATAAATGAAACCACCAGATGGGATGAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 72 bp AGCCTGTACTCCACTGGCTTTATTTTCTCGAAATCTTaGGGCACTTCCGTGACATCTGTGACACTCTCATCA +
Preference number: 6 (lower is better)
Translates to: SLYSTGFIFSKS*GTSVTSVTLSS
Trigger: TGATGAGAGTGTCACAGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp CATTTGGTCCGGGAATTGCACAAGGCTCTGCTTAAATaGAGAGCTCTTTCTAGCATCTTCATATTCAAGGCG +
Preference number: 6 (lower is better)
Translates to: HLVRELHKALLK*RALSSIFIFKA
Trigger: CGCCTTGAATATGAAGATGCTAGAAAGAGCTCTGCATTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp CATTCTGCTGAAGTTTTTCCTCCATACTTAAAGCTGTaGGGGAGTCTAAGAGGGCAATCTGATTCCCTTGAG +
Preference number: 6 (lower is better)
Translates to: HSAEVFPPYLKL*GSLRGQSDSLE
Trigger: CTCAAGGGAATCAGATTGCCCTCTTAGACTCCCCCACAGCTTTAAGTATGGAGGAAAAACTTCAGCAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CCA 72 bp AGGTCTTTTAAAGGGCACTCTTGCAGTTTCAGCATTTaGTCCGGGAATTGCACAAGGCTCTGCTTAAATGCA +
Preference number: 6 (lower is better)
Translates to: RSFKGHSCSFSI*SGNCTRLCLNA
Trigger: TGCATTTAAGCAGAGCCTTGTGCAATTCCCGGACCAAATGCTGAAACTGCAAGAGTGCCCTTTAAAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CAA 72 bp GCTATTTCAGCTCGCAGCTCACGGATAAGTTTGACGTaGGCATCCTCATTAATGGTAGGCTTGTTGATGATG +
Preference number: 6 (lower is better)
Translates to: AISARSSRISLT*ASSLMVGLLMM
Trigger: CATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTTATCCGTGAGCTGCGAGCTGAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 72 bp TCAAATTTTTCCTTCTCCGCAAGTAAATCCTTTAGCTaGTTCTCGATGTGGAAGCTGCGGCGTTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SNFSFSASKSFS*FSMWKLRRLRL
Trigger: GAGCCTCAAACGCCGCAGCTTCCACATCGAGAACAAGCTAAAGGATTTACTTGCGGAGAAGGAAAAATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000450176.1
ENST00000636835.1
CDS CAA 72 bp AGCCACCTTCCCTTCCAGGGTCCCATGATGATCTTTTaGAACACCATCGACCTCATAAATCTTCTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: SHLPFQGPMMIF*NTIDLINLLFQ
Trigger: CTGAAACAGAAGATTTATGAGGTCGATGGTGTTCAAAAAGATCATCATGGGACCCTGGAAGGGAAGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354981.7
ENST00000408042.5
CDS CAA 90 bp AGCGTTTTCAGTCTGGCTATTTCAGCTCGCAGCTCACGGATAAGTTaGACGTTGGCATCCTCATTAATGGTAGGCTTGTTGATGATGTTT +
Preference number: 6 (lower is better)
Translates to: SVFSLAISARSSRIS*TLASSLMVGLLMMF
Trigger: AAACATCATCAACAAGCCTACCATTAATGAGGATGCCAACGTCAAACTTATCCGTGAGCTGCGAGCTGAAATAGCCAGACTGAAAACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp TTCTGCAGGAGGTACTGTAGCTGGCGTTCTTTATATTaGAGCCTGTACTCCACTGGCTTTATTTTCTCGAAA +
Preference number: 6 (lower is better)
Translates to: FCRRYCSWRSLY*SLYSTGFIFSK
Trigger: TTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTGCAATATAAAGAACGCCAGCTACAGTACCTCCTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS GCA 72 bp ATGTTGCCCAAAGGTTCTGGTAGAGAACAAGTCACATaGCTAAGAAGGTCTTTTAAAGGGCACTCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: MLPKGSGREQVT*LRRSFKGHSCS
Trigger: ACTGCAAGAGTGCCCTTTAAAAGACCTTCTTAGGCATGTGACTTGTTCTCTACCAGAACCTTTGGGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS TCA 72 bp ACTTGCTTCTTCTTTGCAAGAGTATTTGCAGCATCCTaGGATAAATCAGCTAAGGCAGAAATGACGTTCCCC +
Preference number: 6 (lower is better)
Translates to: TCFFFARVFAAS*DKSAKAEMTFP
Trigger: GGGGAACGTCATTTCTGCCTTAGCTGATTTATCTCAGGATGCTGCAAATACTCTTGCAAAGAAGAAGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS TCA 72 bp CTTGGGACGTATGTTGCAGCAAAGTCCAACTGGACTTaGCTCTCAAGCCATGTTTATCTTTATGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: LGTYVAAKSNWT*LSSHVYLYESS
Trigger: TGATGACTCATAAAGATAAACATGGCTTGAGAGTCAAGTCCAGTTGGACTTTGCTGCAACATACGTCCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS GCA 72 bp ACTAATTTTAATTGGGTCCTTCAGGTCATCTGGATTTaGGCCCAAAGAGCGAGAAACCATCCGCTCATATTT +
Preference number: 6 (lower is better)
Translates to: TNFNWVLQVIWI*AQRARNHPLIF
Trigger: AAATATGAGCGGATGGTTTCTCGCTCTTTGGGCGCAAATCCAGATGACCTGAAGGACCCAATTAAAATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS GCA 72 bp ATCTTGAGAATTGAAAGTAAGTTTCCAGACCTCAGGTaGGACATTCTGACTGCCTTGAAGATACAATGGGGT +
Preference number: 6 (lower is better)
Translates to: ILRIESKFPDLR*DILTALKIQWG
Trigger: ACCCCATTGTATCTTCAAGGCAGTCAGAATGTCGCACCTGAGGTCTGGAAACTTACTTTCAATTCTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CCA 72 bp TCTGGAACAACAACACACCTGAATTCACTTAAAGCATaGCATTTGATCACATCAAATTGTGCACCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: SGTTTHLNSLKA*HLITSNCAPGG
Trigger: TCCTCCGGGTGCACAATTTGATGTGATCAAATGCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 72 bp ACAACAACACACCTGAATTCACTTAAAGCATGGCATTaGATCACATCAAATTGTGCACCCGGAGGAGGTATG +
Preference number: 6 (lower is better)
Translates to: TTTHLNSLKAWH*ITSNCAPGGGM
Trigger: CATACCTCCTCCGGGTGCACAATTTGATGTGATCAAATGCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 72 bp TGCTCAGGTGGACTATTTCTGGAACCCACTGAAGGTTaGAGTTTCTGTAAGAAGACTAGTTCTACTGTTGAC +
Preference number: 6 (lower is better)
Translates to: CSGGLFLEPTEG*SFCKKTSSTVD
Trigger: GTCAACAGTAGAACTAGTCTTCTTACAGAAACTCAAACCTTCAGTGGGTTCCAGAAATAGTCCACCTGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 90 bp TTTATATTGCAGCCTGTACTCCACTGGCTTTATTTTCTCGAAATCTaGAGGCACTTCCGTGACATCTGTGACACTCTCATCATGTTTTTC +
Preference number: 6 (lower is better)
Translates to: FILQPVLHWLYFLEI*RHFRDICDTLIMFF
Trigger: GAAAAACATGATGAGAGTGTCACAGATGTCACGGAAGTGCCTCAAGATTTCGAGAAAATAAAGCCAGTGGAGTACAGGCTGCAATATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp TTTTCTGGAACAACAACACACCTGAATTCACTTAAAGCATGGCATTaGATCACATCAAATTGTGCACCCGGAGGAGGTATGTTTCGAGAT +
Preference number: 6 (lower is better)
Translates to: FSGTTTHLNSLKAWH*ITSNCAPGGGMFRD
Trigger: ATCTCGAAACATACCTCCTCCGGGTGCACAATTTGATGTGATCAAATGCCATGCTTTAAGTGAATTCAGGTGTGTTGTTGTTCCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS CAA 90 bp GTCTCTCAGCAATCACACGTTCATCCTTATTTCCAAATAGTTTCTTaGGAGGAAATTCAAGGGCAGCAAGCTCTGCATACTTTAACTTCA +
Preference number: 6 (lower is better)
Translates to: VSQQSHVHPYFQIVS*EEIQGQQALHTLTS
Trigger: TGAAGTTAAAGTATGCAGAGCTTGCTGCCCTTGAATTTCCTCCAAAGAAACTATTTGGAAATAAGGATGAACGTGTGATTGCTGAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS TCA 72 bp ATGTCAACCAAGGTAGTCTGGAATTTGGATGACACCTaGACTCCATTTGGCAAAACTAAATCAGGGATTTCT +
Preference number: 6 (lower is better)
Translates to: MSTKVVWNLDDT*TPFGKTKSGIS
Trigger: AGAAATCCCTGATTTAGTTTTGCCAAATGGAGTTCAGGTGTCATCCAAATTCCAGACTACCTTGGTTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408042.5
ENST00000635823.1
CDS TCA 72 bp CTGAAGCAGGTGACTGCTGGTATCTTTATAAAGGTCTaGGAACTTGTGGTAAAAATATCCCAGTCCATTGTT +
Preference number: 6 (lower is better)
Translates to: LKQVTAGIFIKV*ELVVKISQSIV
Trigger: AACAATGGACTGGGATATTTTTACCACAAGTTCTCAGACCTTTATAAAGATACCAGCAGTCACCTGCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635823.1
CDS CCA 72 bp GGTCACGACACAGCTCATATTTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCTCATTATCCTTCATCG +
Preference number: 6 (lower is better)
Translates to: GHDTAHILVYVE*CHCEVSHYPSS
Trigger: CGATGAAGGATAATGAGAAACTTCACAATGGCACCATTCAACGTAAACTAAAATATGAGCTGTGTCGTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408042.5
CDS CAA 72 bp CAATCACACGTTCATCCTTATTTCCAAATAGTTTCTTaGGAGGAAATTCAAGGGCAGCAAGCTCTGCATACT +
Preference number: 6 (lower is better)
Translates to: QSHVHPYFQIVS*EEIQGQQALHT
Trigger: AGTATGCAGAGCTTGCTGCCCTTGAATTTCCTCCAAAGAAACTATTTGGAAATAAGGATGAACGTGTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS CCA 72 bp GAGAAACCATCCGCTCATATTTTAGTTTACGTTGAATaGTGCCATTGTGAAGTTTCTCATTATCCTTCATCG +
Preference number: 6 (lower is better)
Translates to: EKPSAHILVYVE*CHCEVSHYPSS
Trigger: CGATGAAGGATAATGAGAAACTTCACAATGGCACCATTCAACGTAAACTAAAATATGAGCGGATGGTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000355755.7
ENST00000636835.1
CDS TCA 72 bp CAACGTATGTCTGACCTTCCTTTAAATGATATAAGATaGTTCCAGTACTCAAAAGGTCATCATCGATGCCAA +
Preference number: 6 (lower is better)
Translates to: QRMSDLPLNDIR*FQYSKGHHRCQ
Trigger: TTGGCATCGATGATGACCTTTTGAGTACTGGAATCATCTTATATCATTTAAAGGAAGGTCAGACATACGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1
CDS CAA 90 bp ACATCTGTGACACTCTCATCATGTTTTTCCAACAATCTAGATTCTTaGTCATGTTCACATTTTAAACACTCTAGGATCTCCTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: TSVTLSSCFSNNLDS*SCSHFKHSRISCSS
Trigger: AGAAGAACAGGAGATCCTAGAGTGTTTAAAATGTGAACATGACAAAGAATCTAGATTGTTGGAAAAACATGATGAGAGTGTCACAGATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354981.7
ENST00000408042.5
ENST00000636835.1