RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF14 (Homo sapiens)

Ensembl gene IDs: ENSG00000118193

Ensembl transcript IDs: ENST00000367350.5, ENST00000614960.4

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATACCTTTAACAAAACAAGCATTATCAAGAGAAGGTCCAGCCTCTaGTCTCCTAATCTCATCCAACAGTTTAGTATAATTCTGGCAACA +
Preference number: 1 (lower is better)
Translates to: YTFNKTSIIKRRSSL*SPNLIQQFSIILAT
Trigger: TGTTGCCAGAATTATACTAAACTGTTGGATGAGATTAGGAGATCAGAGGCTGGACCTTCTCTTGATAATGCTTGTTTTGTTAAAGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCCGGTCTCAAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFPVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTTGAGACCGG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACCGGTCTCAAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSPVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTTGAGACCGG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAACATCCCAGCTGTCTaGGGAGAGAGAAGGCATAGG +
Preference number: 2 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLNIPAV*GERRHR
Trigger: CCTATGCCTTCTCTCTCCTCAGACAGCTGGGATGTT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAGAAGGTCCAGCCTCTaGTCTCCTAATCTCATCCAA +
Preference number: 2 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSRRSSL*SPNLIQ
Trigger: TTGGATGAGATTAGGAGATCAGAGGCTGGACCTTCT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATAGGCACAAAGGTAACTaGTTGTTCAGGTTTCCACTC +
Preference number: 2 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNRHKGN*LFRFPL
Trigger: GAGTGGAAACCTGAACAATCAGTTACCTTTGTGCCT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAGGCACAAAGGTAACTaGTTGTTCAGGTTTCCACTC +
Preference number: 2 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFRHKGN*LFRFPL
Trigger: GAGTGGAAACCTGAACAATCAGTTACCTTTGTGCCT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAGGAAGCTACACCCTTaGACATACTATTCAAAATGG +
Preference number: 2 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFRKLHP*TYYSKW
Trigger: CCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR GCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCAGGGTAAACTACTGTaGCAGCAAGCCATATTATTA +
Preference number: 2 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNQGKLL*QQAILL
Trigger: TAATAATATGGCTTGCTGGCACAGTAGTTTACCCTG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGTGAGCCACTGTGTCTaGCCTTTGATAAATAGATAT +
Preference number: 2 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSVSHCV*PLINRY
Trigger: ATATCTATTTATCAAAGGCCAGACACAGTGGCTCAC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGTGAGCCACTGTGTCTaGCCTTTGATAAATAGATAT +
Preference number: 2 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFVSHCV*PLINRY
Trigger: ATATCTATTTATCAAAGGCCAGACACAGTGGCTCAC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTaGAGGTCAAAAACGTCAAACTATTTCCGTAATGTAAGATCCCAC +
Preference number: 2 (lower is better)
Translates to: HPSIVTKYLFKLYIL*RSKTSNYFRNVRSH
Trigger: GTGGGATCTTACATTACGGAAATAGTTTGACGTTTTTGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAACATACTATTCAAAATaGCAACCAGTTAACCCTTTG +
Preference number: 2 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSTYYSK*QPVNPL
Trigger: CAAAGGGTTAACTGGTTGCCATTTTGAATAGTATGT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCAGGAAGCTACACCCTaGAACATACTATTCAAAATG +
Preference number: 3 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNQEATP*NILFKM
Trigger: CATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR TCA 72 bp ACTTATAATTTGGAAAGAAACAGGAAGCTACACCCTTaGACATACTATTCAAAATGGCAACCAGTTAACCCT +
Preference number: 3 (lower is better)
Translates to: TYNLERNRKLHP*TYYSKWQPVNP
Trigger: AGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTCTTTCCAAATTATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR TCA 72 bp AACAAAACAAGCATTATCAAGAGAAGGTCCAGCCTCTaGTCTCCTAATCTCATCCAACAGTTTAGTATAATT +
Preference number: 3 (lower is better)
Translates to: NKTSIIKRRSSL*SPNLIQQFSII
Trigger: AATTATACTAAACTGTTGGATGAGATTAGGAGATCAGAGGCTGGACCTTCTCTTGATAATGCTTGTTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
3UTR TCA 72 bp CAAACTGCACAGGCAAAGTGCTACTTGCCAGATTATTaGCTAATAAAAACACATATAGAGCTTCAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: QTAQAKCYLPDY*LIKTHIELQKE
Trigger: TTCTTTCTGAAGCTCTATATGTGTTTTTATTAGTCAATAATCTGGCAAGTAGCACTTTGCCTGTGCAGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCGGGCCGAGAGGCCCTaGAGTCCGGCTTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNRAERP*SPASRS
Trigger: GGACCGGGAAGCCGGACTTCAGGGCCTCTCGGCCCG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCAGGGTCCGGCACCTTaGGGACCCCCTCGACACAGT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTQGPAP*GPPRHS
Trigger: ACTGTGTCGAGGGGGTCCCCAAGGTGCCGGACCCTG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCCGGTCTCAAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTPVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTTGAGACCGG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGCACGCCCTCCCCAGTaGCGAAACTTCGCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTARPPQ*RNFAPP
Trigger: CGGAGGGGCGAAGTTTCGGCACTGGGGAGGGCGTGC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGCCGACCTGGAATGCTaGGGAACTGAATGGGGGACT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTADLEC*GTEWGT
Trigger: AGTCCCCCATTCAGTTCCTCAGCATTCCAGGTCGGC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGCAGAGACGCTGCCTTaGGCCCTTCGTTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTAETLP*ALRSGT
Trigger: GGTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACCGCCCGCAGAGCAGTaGTCGCCTGTAGGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTPPAEQ*SPVGKA
Trigger: CGCTTTCCCTACAGGCGACCACTGCTCTGCGGGCGG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTCCCAGCAGAGACGCTaGCTTGCGCCCTTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSQQRR*LAPFVR
Trigger: CCGAACGAAGGGCGCAAGGCAGCGTCTCTGCTGGGA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACCGGTCTCAAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTPVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTTGAGACCGG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAACATCCCAGCTGTCTaGGGAGAGAGAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTNIPAV*GERRHR
Trigger: CCTATGCCTTCTCTCTCCTCAGACAGCTGGGATGTT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCACAAACAGCATCCATaGATTCCTCCTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLHKQHP*IPPGHW
Trigger: CCAGTGTCCAGGAGGAATTCATGGATGCTGTTTGTG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGAATCCTACTGGGTGTaGATTCCTCTGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLESYWV*IPLSSL
Trigger: CAGTGAGCTCAGAGGAATGCACACCCAGTAGGATTC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCCACAAATTCTGTCTTaGTCTGGGTCATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLPQILS*SGSSPG
Trigger: CCCTGGTGATGACCCAGACCAAGACAGAATTTGTGG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATGTCGGCTACTGTGGGTaGGGGCATTCAGTGATGAAC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNVGYCG*GHSVMN
Trigger: GTTCATCACTGAATGCCCTCACCCACAGTAGCCGAC...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGTCGGCTACTGTGGGTaGGGGCATTCAGTGATGAAC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTVGYCG*GHSVMN
Trigger: GTTCATCACTGAATGCCCTCACCCACAGTAGCCGAC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCTGGGCTCTTAAGCTaGGGCAGGCTGCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSAGLLS*GRLHFV
Trigger: AACAAAGTGCAGCCTGCCTCAGCTTAAGAGCCCAGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGCTGGGCTCTTAAGCTaGGGCAGGCTGCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFAGLLS*GRLHFV
Trigger: AACAAAGTGCAGCCTGCCTCAGCTTAAGAGCCCAGC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCCTGCAGAGGTGTTCTaGACTACAGTTTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLPAEVF*TTVSSS
Trigger: CGAAGAAGAAACTGTAGTTCAGAACACCTCTGCAGG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCCTGCAGAGGTGTTCTaGACTACAGTTTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTPAEVF*TTVSSS
Trigger: CGAAGAAGAAACTGTAGTTCAGAACACCTCTGCAGG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTCTTCTCTCTCTTGGTaGAAGGTCTTACGCGTACTG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSSLSW*KVLRVL
Trigger: CAGTACGCGTAAGACCTTTCACCAAGAGAGAGAAGA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACGATCTCCATTAGTGTaGGCCGTAGAGCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSRSPLV*AVEQRS
Trigger: TGAGCGCTGCTCTACGGCTCACACTAATGGAGATCG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCGATCTCCATTAGTGTaGGCCGTAGAGCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFRSPLV*AVEQRS
Trigger: TGAGCGCTGCTCTACGGCTCACACTAATGGAGATCG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAGTATTCACACCCACTaGATCCTACTGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLSIHTH*ILLGVH
Trigger: ATGCACACCCAGTAGGATTCAGTGGGTGTGAATACT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGAAGGTCCAGCCTCTaGTCTCCTAATCTCATCCAA +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTRRSSL*SPNLIQ
Trigger: TTGGATGAGATTAGGAGATCAGAGGCTGGACCTTCT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGGTAAGGGGCATGTCTaGTGTTTTTCTACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTGKGHV*CFSTGR
Trigger: TCTGCCAGTAGAAAAACAGCAGACATGCCCCTTACC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGCTTCCAGAATTCTTaGATGGCGGATGCTATGGTC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSFQNS*MADAMV
Trigger: GACCATAGCATCCGCCATGCAAGAATTCTGGAAGCT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGTTCTTCAAAGAAGTaGACCTCCCGGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSSSKK*TSREIL
Trigger: GAGGATTTCCCGGGAGGTGCACTTCTTTGAAGAACT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCCTTCGCCGCCGACCTaGAATGCTGAGGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFPSPPT*NAEELN
Trigger: ATTCAGTTCCTCAGCATTCCAGGTCGGCGGCGAAGG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTTAAGTCGGCTACTGTaGGTGAGGGCATTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLSRLL*VRAFSD
Trigger: ATCACTGAATGCCCTCACCCACAGTAGCCGACTTAA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTTCCCTCACTCTCAGTaGTTGCTTTCTCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTFPHSQ*LLSLPI
Trigger: AATGGGCAGAGAAAGCAACCACTGAGAGTGAGGGAA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTTCCCTCACTCTCAGTaGTTGCTTTCTCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLFPHSQ*LLSLPI
Trigger: AATGGGCAGAGAAAGCAACCACTGAGAGTGAGGGAA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTTTGCTTCCCCAACTaGGATAATACTCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLCFPN*DNTHCP
Trigger: GGGACAGTGAGTATTATCCCAGTTGGGGAAGCAAAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTGCTTCCCCAACTaGGATAATACTCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLCFPN*DNTHCP
Trigger: GGGACAGTGAGTATTATCCCAGTTGGGGAAGCAAAG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTTGTAGTTCTCCTCTaGAGTGCCAATCTACCTACA +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLVVLL*SANLPT
Trigger: TGTAGGTAGATTGGCACTTCAGAGGAGAACTACAAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTGTTCCCAACACTTTaGTATCCAACTTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLFPTL*YPTCSE
Trigger: CTCAGAGCAAGTTGGATATCAAAGTGTTGGGAACAG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTGTTCCCAACACTTTaGTATCCAACTTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLFPTL*YPTCSE
Trigger: CTCAGAGCAAGTTGGATATCAAAGTGTTGGGAACAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTTTCTTTCCCACTCATaGAGACTACCTGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLFLSHS*RLPGML
Trigger: AAGCATCCCAGGTAGTCTTCATGAGTGGGAAAGAAA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAACATCCCAGCTGTCTaGGGAGAGAGAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFNIPAV*GERRHR
Trigger: CCTATGCCTTCTCTCTCCTCAGACAGCTGGGATGTT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAGGTCTTACGCGTACTaGCACTGTCACTTGACTATT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLRSYAY*HCHLTI
Trigger: AATAGTCAAGTGACAGTGGCAGTACGCGTAAGACCT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTTCTTGCATGGCGGATaGTATGGTCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTFLHGG*YGLLKP
Trigger: AGGCTTTAGAAGACCATAGCATCCGCCATGCAAGAA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTCATCCTCAAGTCTTaGTATGTTGGTACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLILKS*YVGTRQ
Trigger: CTGCCTTGTACCAACATAGCAAGACTTGAGGATGAG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGACTCAGGGAAGCAATaGGTGGTCTATTACTTGAGT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTDSGKQ*VVYYLS
Trigger: ACTCAAGTAATAGACCACCCATTGCTTCCCTGAGTC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGCATGGCGGATGCTATaGTCTTCTAAAGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTAWRML*SSKACF
Trigger: AAAACAGGCTTTAGAAGACCATAGCATCCGCCATGC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCCCACTGAATCCTACTaGGTGTGCATTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNPTESY*VCIPLS
Trigger: GCTCAGAGGAATGCACACCCAGTAGGATTCAGTGGG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACCCACTGAATCCTACTaGGTGTGCATTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSPTESY*VCIPLS
Trigger: GCTCAGAGGAATGCACACCCAGTAGGATTCAGTGGG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCAAAAAGACAGGTATTaGAGCCTTCGAAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTQKDRY*SLRRLF
Trigger: AAAGAGCCTTCGAAGGCTTCAATACCTGTCTTTTTG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGCACCCCAGATAACTaGATATCATGGCTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSTPDN*ISWLEF
Trigger: AAACTCAAGCCATGATATTCAGTTATCTGGGGTGCT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGAAGAAAGCTCTTGCTaGGCCATTTCTTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTEESSC*AISFAI
Trigger: GATTGCAAAAGAAATGGCTCAGCAAGAGCTTTCTTC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACACAAACAGCATCCATaGATTCCTCCTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSHKQHP*IPPGHW
Trigger: CCAGTGTCCAGGAGGAATTCATGGATGCTGTTTGTG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGTTCTCCTCTGAAGTaGCAATCTACCTACAGGATT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSSPLK*QSTYRI
Trigger: AATCCTGTAGGTAGATTGGCACTTCAGAGGAGAACT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAACACTCCTTTGGTTTaGTTGTTCCGAAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLNTPLV*LFRKCR
Trigger: TCTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAAGGATGTTATTTCTTaGCGACAGAGCCTGTATCGT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTKDVIS*RQSLYR
Trigger: ACGATACAGGCTCTGTCGGCAAGAAATAACATCCTT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTCTTTCCACACTCTTTaGATTTCTGCCATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLSFHTL*ISAMSL
Trigger: GAGAGACATGGCAGAAATGCAAAGAGTGTGGAAAGA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGCAATCTGGATTCCTTaGATCATTTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTAIWIP*IISSFA
Trigger: GGCAAAGGAAGAAATGATGCAAGGAATCCAGATTGC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCATTAGCACTACTAGCTaGTCAAAAGCACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTISTTS*SKAHAV
Trigger: GACTGCATGTGCTTTTGAGCAGCTAGTAGTGCTAAT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTTCAGAACTGCTAACTaGCCCACATACTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLFRTAN*PTYFTA
Trigger: AGCTGTAAAGTATGTGGGGCAGTTAGCAGTTCTGAA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCACCTTTATTCTTACTaGCGTCAATCCCGCTTGATT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLHLYSY*RQSRLI
Trigger: AATCAAGCGGGATTGACGGCAGTAAGAATAAAGGTG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATGAATCCTACTGGGTGTaGATTCCTCTGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNESYWV*IPLSSL
Trigger: CAGTGAGCTCAGAGGAATGCACACCCAGTAGGATTC...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAGTATCTCTTCCAGATaGCCTTTTTCCTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLSISSR*PFSFLD
Trigger: GTCCAGAAAGGAAAAAGGCCATCTGGAAGAGATACT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGGGTGGTCTATTACTTaGGTACTTAAGTGCAACATT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLGWSIT*VLKCNI
Trigger: AATGTTGCACTTAAGTACTCAAGTAATAGACCACCC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTTCCCAATACTTCTATaGTACAAGTTTCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLFPILL*YKFPVP
Trigger: GGGAACAGGAAACTTGTATCATAGAAGTATTGGGAA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTCTTCTCTCTCTTGGTaGAAGGTCTTACGCGTACTG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNSSLSW*KVLRVL
Trigger: CAGTACGCGTAAGACCTTTCACCAAGAGAGAGAAGA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACGACTTGTTATTCTGTaGTCGTGTTCTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTRLVIL*SCSSPS
Trigger: GGAAGGGGAAGAACACGATCACAGAATAACAAGTCG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAAAGCACATGCAGTCTaGATAGTAAGTGACTGGATT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTKAHAV*IVSDWI
Trigger: AATCCAGTCACTTACTATTCAGACTGCATGTGCTTT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCCGTCAATCCCGCTTaGTTTAGATTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSAVNPA*FRLLVF
Trigger: GAACACCAACAATCTAAATCAAGCGGGATTGACGGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATGCCGTCAATCCCGCTTaGTTTAGATTGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNAVNPA*FRLLVF
Trigger: GAACACCAACAATCTAAATCAAGCGGGATTGACGGC...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATAGTATTCACACCCACTaGATCCTACTGGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNSIHTH*ILLGVH
Trigger: ATGCACACCCAGTAGGATTCAGTGGGTGTGAATACT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGAAGGTCCAGCCTCTaGTCTCCTAATCTCATCCAA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTRRSSL*SPNLIQ
Trigger: TTGGATGAGATTAGGAGATCAGAGGCTGGACCTTCT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGGTAAGGGGCATGTCTaGTGTTTTTCTACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSGKGHV*CFSTGR
Trigger: TCTGCCAGTAGAAAAACAGCAGACATGCCCCTTACC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCATCATTTCTTCCTTTaGCTTCAACTGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLHHFFL*LQLSLF
Trigger: AAAGAGGCTCAGTTGAAGGCAAAGGAAGAAATGATG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAGCTTCCAGAATTCTTaGATGGCGGATGCTATGGTC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSFQNS*MADAMV
Trigger: GACCATAGCATCCGCCATGCAAGAATTCTGGAAGCT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTAGAAAATGTAGCTTaGTCCCTTTCAGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLENVA*SLSELL
Trigger: TAGCAGTTCTGAAAGGGAGCAAGCTACATTTTCTAG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTAGAAAATGTAGCTTaGTCCCTTTCAGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLENVA*SLSELL
Trigger: TAGCAGTTCTGAAAGGGAGCAAGCTACATTTTCTAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCAGGGTAAACTACTGTaGCAGCAAGCCATATTATTA +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLQGKLL*QQAILL
Trigger: TAATAATATGGCTTGCTGGCACAGTAGTTTACCCTG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAGTTCTTCAAAGAAGTaGACCTCCCGGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSSSKK*TSREIL
Trigger: GAGGATTTCCCGGGAGGTGCACTTCTTTGAAGAACT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTTAAGTCGGCTACTGTaGGTGAGGGCATTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLSRLL*VRAFSD
Trigger: ATCACTGAATGCCCTCACCCACAGTAGCCGACTTAA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCGTTGTCAAGTGTCCTaGTCTAACAACTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFRCQVS*SNNFSL
Trigger: CAGACTGAAGTTGTTAGATCAGGACACTTGACAACG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACGTTGTCAAGTGTCCTaGTCTAACAACTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTRCQVS*SNNFSL
Trigger: CAGACTGAAGTTGTTAGATCAGGACACTTGACAACG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTTTCTTTCCCACTCATaGAGACTACCTGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNFLSHS*RLPGML
Trigger: AAGCATCCCAGGTAGTCTTCATGAGTGGGAAAGAAA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAATCATTGCAGTTTTTaGATTTCCACCCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTNHCSF*ISTQTF
Trigger: GAAAGTCTGGGTGGAAATTCAAAAACTGCAATGATT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATTCCGACTGTTTCTCTaGGCAGCTTTTAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTFRLFL*AAFSFA
Trigger: TGCAAAGCTAAAAGCTGCTCAGAGAAACAGTCGGAA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTTTTTTGATAGTACAATaGTCATCAGCAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLFLIVQ*SSAIST
Trigger: GGTGCTGATTGCTGATGATCATTGTACTATCAAAAA...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTAAAGAGTTCATGCTaGAGTTCTTTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLKSSC*SSFAFS
Trigger: GGAAAAAGCAAAAGAACTTCAGCATGAACTCTTTAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTAAAGAGTTCATGCTaGAGTTCTTTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTLKSSC*SSFAFS
Trigger: GGAAAAAGCAAAAGAACTTCAGCATGAACTCTTTAG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAGGCACAAAGGTAACTaGTTGTTCAGGTTTCCACTC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSRHKGN*LFRFPL
Trigger: GAGTGGAAACCTGAACAATCAGTTACCTTTGTGCCT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGGTCTTACGCGTACTaGCACTGTCACTTGACTATT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTRSYAY*HCHLTI
Trigger: AATAGTCAAGTGACAGTGGCAGTACGCGTAAGACCT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACTCACTCTCAGTGGTTaGTTTCTCTGCCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSLTLSG*FLCPFS
Trigger: TGAAAATGGGCAGAGAAAGCAACCACTGAGAGTGAG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACTCACTCTCAGTGGTTaGTTTCTCTGCCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTLTLSG*FLCPFS
Trigger: TGAAAATGGGCAGAGAAAGCAACCACTGAGAGTGAG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCTCTTCTCTCAGTTCTaGTTCCAGTGCTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLLFSQF*FQCFYF
Trigger: AAAATAAAAGCACTGGAAGCAGAACTGAGAGAAGAG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATTCTTGCATGGCGGATaGTATGGTCTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSFLHGG*YGLLKP
Trigger: AGGCTTTAGAAGACCATAGCATCCGCCATGCAAGAA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACTCATCCTCAAGTCTTaGTATGTTGGTACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSLILKS*YVGTRQ
Trigger: CTGCCTTGTACCAACATAGCAAGACTTGAGGATGAG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGCATGGCGGATGCTATaGTCTTCTAAAGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTAWRML*SSKACF
Trigger: AAAACAGGCTTTAGAAGACCATAGCATCCGCCATGC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATCCAGAATTCTTGCATaGCGGATGCTATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSRILA*RMLWSS
Trigger: AGAAGACCATAGCATCCGCCATGCAAGAATTCTGGA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATCCAGAATTCTTGCATaGCGGATGCTATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSRILA*RMLWSS
Trigger: AGAAGACCATAGCATCCGCCATGCAAGAATTCTGGA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCATGAGCCTTGGAAATaGCAAATAGCCCATTATAAA +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLHEPWK*QIAHYK
Trigger: TTTATAATGGGCTATTTGCCATTTCCAAGGCTCATG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATCCATGAATTCCTCCTaGACACTGGCAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSMNSS*TLAALL
Trigger: CAATAAAGCTGCCAGTGTCCAGGAGGAATTCATGGA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATCCATGAATTCCTCCTaGACACTGGCAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSMNSS*TLAALL
Trigger: CAATAAAGCTGCCAGTGTCCAGGAGGAATTCATGGA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCACTGTAAAAATCACTaGCCAAGTTGCGAATACTTT +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTHCKNH*PSCEYF
Trigger: AAAGTATTCGCAACTTGGCCAGTGATTTTTACAGTG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCACTGTAAAAATCACTaGCCAAGTTGCGAATACTTT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLHCKNH*PSCEYF
Trigger: AAAGTATTCGCAACTTGGCCAGTGATTTTTACAGTG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCAGCCATCATTTCAATaGCCTGTGGATCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNQPSFQ*PVDLHL
Trigger: TAGATGAAGATCCACAGGTCATTGAAATGATGGCTG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACAGCCATCATTTCAATaGCCTGTGGATCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTQPSFQ*PVDLHL
Trigger: TAGATGAAGATCCACAGGTCATTGAAATGATGGCTG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATATATCCAACTTGCTCTaGGTAGGTTTCGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNISNLL*VGFVVK
Trigger: CTTGACAACGAAACCTACTCAGAGCAAGTTGGATAT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAATATCCAACTTGCTCTaGGTAGGTTTCGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSISNLL*VGFVVK
Trigger: CTTGACAACGAAACCTACTCAGAGCAAGTTGGATAT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGCACCCCAGATAACTaGATATCATGGCTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSTPDN*ISWLEF
Trigger: AAACTCAAGCCATGATATTCAGTTATCTGGGGTGCT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTCCTTTGCCTTCAACTaGGCCTCTTTTATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNSFAFN*ASFISA
Trigger: AGCAGAAATAAAAGAGGCTCAGTTGAAGGCAAAGGA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATCCTTTGCCTTCAACTaGGCCTCTTTTATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSFAFN*ASFISA
Trigger: AGCAGAAATAAAAGAGGCTCAGTTGAAGGCAAAGGA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGAAGAAAGCTCTTGCTaGGCCATTTCTTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFEESSC*AISFAI
Trigger: GATTGCAAAAGAAATGGCTCAGCAAGAGCTTTCTTC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAGTCTGAATAGTAAGTaGCTGGATTGCTCGATCAGA +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSLNSK*LDCSIR
Trigger: TCTGATCGAGCAATCCAGTCACTTACTATTCAGACT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGTCTGAATAGTAAGTaGCTGGATTGCTCGATCAGA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSLNSK*LDCSIR
Trigger: TCTGATCGAGCAATCCAGTCACTTACTATTCAGACT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGTTCTCCTCTGAAGTaGCAATCTACCTACAGGATT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSSPLK*QSTYRI
Trigger: AATCCTGTAGGTAGATTGGCACTTCAGAGGAGAACT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAACACTCCTTTGGTTTaGTTGTTCCGAAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSNTPLV*LFRKCR
Trigger: TCTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAAGGATGTTATTTCTTaGCGACAGAGCCTGTATCGT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFKDVIS*RQSLYR
Trigger: ACGATACAGGCTCTGTCGGCAAGAAATAACATCCTT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTCTTTCCACACTCTTTaGATTTCTGCCATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNSFHTL*ISAMSL
Trigger: GAGAGACATGGCAGAAATGCAAAGAGTGTGGAAAGA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAATTAGCACTACTAGCTaGTCAAAAGCACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTISTTS*SKAHAV
Trigger: GACTGCATGTGCTTTTGAGCAGCTAGTAGTGCTAAT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATTCAGAACTGCTAACTaGCCCACATACTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSFRTAN*PTYFTA
Trigger: AGCTGTAAAGTATGTGGGGCAGTTAGCAGTTCTGAA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACACCTTTATTCTTACTaGCGTCAATCCCGCTTGATT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTHLYSY*RQSRLI
Trigger: AATCAAGCGGGATTGACGGCAGTAAGAATAAAGGTG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAGTATCTCTTCCAGATaGCCTTTTTCCTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTSISSR*PFSFLD
Trigger: GTCCAGAAAGGAAAAAGGCCATCTGGAAGAGATACT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAAATTCAAAGTCTTTTaGACCCTCACTTATAGGAGT +
Preference number: 4 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLKFKVF*TLTYRS
Trigger: ACTCCTATAAGTGAGGGTCCAAAAGACTTTGAATTT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGATTTATATCACTATaGCATCCTTTCAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTRFISL*HPFSAE
Trigger: TTCTGCACTGAAAGGATGCCATAGTGATATAAATCT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCACATACTATTCAAAATaGCAACCAGTTAACCCTTTG +
Preference number: 4 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTTYYSK*QPVNPL
Trigger: CAAAGGGTTAACTGGTTGCCATTTTGAATAGTATGT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGGGTGGTCTATTACTTaGGTACTTAAGTGCAACATT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSGWSIT*VLKCNI
Trigger: AATGTTGCACTTAAGTACTCAAGTAATAGACCACCC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATTCCCAATACTTCTATaGTACAAGTTTCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTFPILL*YKFPVP
Trigger: GGGAACAGGAAACTTGTATCATAGAAGTATTGGGAA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCACTGCCACTGTCACTTaGCTATTCTCTACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFTATVT*LFSTFK
Trigger: CTTAAAAGTAGAGAATAGTCAAGTGACAGTGGCAGT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATACTGCCACTGTCACTTaGCTATTCTCTACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNTATVT*LFSTFK
Trigger: CTTAAAAGTAGAGAATAGTCAAGTGACAGTGGCAGT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCACTGACAATGTTCATTaGCAGTGCTTCAACATATGG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFTDNVH*QCFNIW
Trigger: CCATATGTTGAAGCACTGTCAATGAACATTGTCAGT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAACTGACAATGTTCATTaGCAGTGCTTCAACATATGG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTTDNVH*QCFNIW
Trigger: CCATATGTTGAAGCACTGTCAATGAACATTGTCAGT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTATCAGCGTAAGAACTaGCAATGTTCATTGACAGTG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNYQRKN*QCSLTV
Trigger: CACTGTCAATGAACATTGTCAGTTCTTACGCTGATA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATATCAGCGTAAGAACTaGCAATGTTCATTGACAGTG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTYQRKN*QCSLTV
Trigger: CACTGTCAATGAACATTGTCAGTTCTTACGCTGATA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATTCCTGAATCATCATTaGGAGTTTCATAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTFLNHH*EFHRAP
Trigger: TGGAGCTCTATGAAACTCTCAATGATGATTCAGGAA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTTCCTGAATCATCATTaGGAGTTTCATAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNFLNHH*EFHRAP
Trigger: TGGAGCTCTATGAAACTCTCAATGATGATTCAGGAA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAATAGCATTGGCTTCCTaGATCATCATTGAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTIALAS*IIIESF
Trigger: GAAACTCTCAATGATGATTCAGGAAGCCAATGCTAT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAAAGCACATGCAGTCTaGATAGTAAGTGACTGGATT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSKAHAV*IVSDWI
Trigger: AATCCAGTCACTTACTATTCAGACTGCATGTGCTTT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATAGGAAGCTACACCCTTaGACATACTATTCAAAATGG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNRKLHP*TYYSKW
Trigger: CCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAGGAAGCTACACCCTTaGACATACTATTCAAAATGG +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSRKLHP*TYYSKW
Trigger: CCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACATCATTTCTTCCTTTaGCTTCAACTGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSHHFFL*LQLSLF
Trigger: AAAGAGGCTCAGTTGAAGGCAAAGGAAGAAATGATG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATAATCACTGGCCAAGTTaGGAATACTTTCAACACAAG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNNHWPS*EYFQHK
Trigger: CTTGTGTTGAAAGTATTCGCAACTTGGCCAGTGATT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAATCACTGGCCAAGTTaGGAATACTTTCAACACAAG +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTNHWPS*EYFQHK
Trigger: CTTGTGTTGAAAGTATTCGCAACTTGGCCAGTGATT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACAGGGTAAACTACTGTaGCAGCAAGCCATATTATTA +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTQGKLL*QQAILL
Trigger: TAATAATATGGCTTGCTGGCACAGTAGTTTACCCTG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCTCATGAAGACTACCTaGGATGCTTTTTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLMKTT*DAFSIF
Trigger: GAAGATTGAAAAAGCATCCCAGGTAGTCTTCATGAG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACTCATGAAGACTACCTaGGATGCTTTTTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTLMKTT*DAFSIF
Trigger: GAAGATTGAAAAAGCATCCCAGGTAGTCTTCATGAG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCAGTGCTTCAACATATaGTCCATAAACAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFQCFNI*SINRMF
Trigger: GAACATCCTGTTTATGGACCATATGTTGAAGCACTG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACAGTGCTTCAACATATaGTCCATAAACAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTQCFNI*SINRMF
Trigger: GAACATCCTGTTTATGGACCATATGTTGAAGCACTG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACAAGTCTTGCTATGTTaGTACAAGGCAGTAAATCAC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSQVLLC*YKAVNH
Trigger: GTGATTTACTGCCTTGTACCAACATAGCAAGACTTG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCAAGTCTTGCTATGTTaGTACAAGGCAGTAAATCAC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNQVLLC*YKAVNH
Trigger: GTGATTTACTGCCTTGTACCAACATAGCAAGACTTG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCATTCAGTGTCATTTTaGCAGAATCTATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFHSVSF*QNLFQL
Trigger: CAGCTGAAATAGATTCTGTCAAAATGACACTGAATG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACTGAATATCATGGCTTaGGTTTGGTTTATACTTTCC +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTLNIMA*VWFILS
Trigger: GGAAAGTATAAACCAAACTCAAGCCATGATATTCAG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCTGAATATCATGGCTTaGGTTTGGTTTATACTTTCC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLNIMA*VWFILS
Trigger: GGAAAGTATAAACCAAACTCAAGCCATGATATTCAG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR TCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTTTTTGATAGTACAATaGTCATCAGCAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNFLIVQ*SSAIST
Trigger: GGTGCTGATTGCTGATGATCATTGTACTATCAAAAA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATGCTTGTTCCGAAAGTaGAGATATAACTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSCLFRK*RYNFSQ
Trigger: TTGGGAAAAGTTATATCTGCACTTTCGGAACAAGCA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTGCTTGTTCCGAAAGTaGAGATATAACTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFCLFRK*RYNFSQ
Trigger: TTGGGAAAAGTTATATCTGCACTTTCGGAACAAGCA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACTCTTCTCTCAGTTCTaGTTCCAGTGCTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSLFSQF*FQCFYF
Trigger: AAAATAAAAGCACTGGAAGCAGAACTGAGAGAAGAG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCATGCTGAAGTTCTTTTaGTTTTTCCAGTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFMLKFF*FFQSRI
Trigger: GATTCTGGACTGGAAAAAGCAAAAGAACTTCAGCAT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAATGCTGAAGTTCTTTTaGTTTTTCCAGTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSMLKFF*FFQSRI
Trigger: GATTCTGGACTGGAAAAAGCAAAAGAACTTCAGCAT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATACTATTAAACGGGCTTaGTTAGCATATCTAAGTGTG +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNTIKRA*LAYLSV
Trigger: CACACTTAGATATGCTAACCAAGCCCGTTTAATAGT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACATGAGCCTTGGAAATaGCAAATAGCCCATTATAAA +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSHEPWK*QIAHYK
Trigger: TTTATAATGGGCTATTTGCCATTTCCAAGGCTCATG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACTCATAGACACGCTTTaGTACACCTTTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: STHEKITLYKRLMNQLQTLIDTL*YTFILT
Trigger: AGTAAGAATAAAGGTGTACCAAAGCGTGTCTATGAG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCTCATAGACACGCTTTaGTACACCTTTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLIDTL*YTFILT
Trigger: AGTAAGAATAAAGGTGTACCAAAGCGTGTCTATGAG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAATTTACATATGTCTTTaGTTCCCCAACTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSIYICL*FPNWDN
Trigger: ATTATCCCAGTTGGGGAAGCAAAGACATATGTAAAT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCATTTACATATGTCTTTaGTTCCCCAACTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFIYICL*FPNWDN
Trigger: ATTATCCCAGTTGGGGAAGCAAAGACATATGTAAAT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTTATTCTTTAGGAACTaGTCAATATCACCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLFFRN*SISPKH
Trigger: ATGCTTGGGTGATATTGAGCAGTTCCTAAAGAATAA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR GCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATTATTCTTTAGGAACTaGTCAATATCACCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSLFFRN*SISPKH
Trigger: ATGCTTGGGTGATATTGAGCAGTTCCTAAAGAATAA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTCTTGGAATTATTCCTaGTTCTTCACTAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSWNYS*FFTKSH
Trigger: ATGGGATTTAGTGAAGAACCAGGAATAATTCCAAGA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTCTTGGAATTATTCCTaGTTCTTCACTAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNSWNYS*FFTKSH
Trigger: ATGGGATTTAGTGAAGAACCAGGAATAATTCCAAGA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAATAAAAACACTCCTTTaGTTTGCTTGTTCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSIKTLL*FACSES
Trigger: ACTTTCGGAACAAGCAAACCAAAGGAGTGTTTTTAT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAAATTCAAAGTCTTTTaGACCCTCACTTATAGGAGT +
Preference number: 4 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSKFKVF*TLTYRS
Trigger: ACTCCTATAAGTGAGGGTCCAAAAGACTTTGAATTT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CCA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCACATACTATTCAAAATaGCAACCAGTTAACCCTTTG +
Preference number: 4 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFTYYSK*QPVNPL
Trigger: CAAAGGGTTAACTGGTTGCCATTTTGAATAGTATGT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp CCGACTCGGGGAGACTCGGGGAGAAGCCCACGGGCCGAGAGGCCCTaGAGTCCGGCTTCCCGGTCCCAGCAGAGACGCTGCCTTGCGCCC +
Preference number: 5 (lower is better)
Translates to: PTRGDSGRSPRAERP*SPASRSQQRRCLAP
Trigger: GGGCGCAAGGCAGCGTCTCTGCTGGGACCGGGAAGCCGGACTTCAGGGCCTCTCGGCCCGTGGGCTTCTCCCCGAGTCTCCCCGAGTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS GCA 90 bp GAGGCCCTGAAGTCCGGCTTCCCGGTCCCAGCAGAGACGCTGCCTTaGGCCCTTCGTTCGGGGACCCCTTCGCCGCCGACCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: EALKSGFPVPAETLP*ALRSGTPSPPTWNA
Trigger: AGCATTCCAGGTCGGCGGCGAAGGGGTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGCTGGGACCGGGAAGCCGGACTTCAGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAGCAGAGACGCTGCCTaGCGCCCTTCGTTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSRDAA*RPSFGD
Trigger: GTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGCT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCAGGGTCCGGCACCTaGGGGACCCCCTCGACACAG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSAGSGT*GTPSTQ
Trigger: CTGTGTCGAGGGGGTCCCCAAGGTGCCGGACCCTGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS TCA 90 bp TTTGATATCCAACTTGCTCTGAGTAGGTTTCGTTGTCAAGTGTCCTaGTCTAACAACTTCAGTCTGACTCAGGGAAGCAATGGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FDIQLALSRFRCQVS*SNNFSLTQGSNGWS
Trigger: AGACCACCCATTGCTTCCCTGAGTCAGACTGAAGTTGTTAGATCAGGACACTTGACAACGAAACCTACTCAGAGCAAGTTGGATATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp TCACTAACAAGCAAAGATGATTCTTTGTTCCTTGTAGTTCTCCTCTaGAGTGCCAATCTACCTACAGGATTAGGGGTAAGGGGCATGTCT +
Preference number: 5 (lower is better)
Translates to: SLTSKDDSLFLVVLL*SANLPTGLGVRGMS
Trigger: AGACATGCCCCTTACCCCTAATCCTGTAGGTAGATTGGCACTTCAGAGGAGAACTACAAGGAACAAAGAATCATCTTTGCTTGTTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp AACAACTTCAGTCTGACTCAGGGAAGCAATGGGTGGTCTATTACTTaGGTACTTAAGTGCAACATTTTCATTTGCTCTACTGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: NNFSLTQGSNGWSIT*VLKCNIFICSTGGR
Trigger: TCTGCCCCCAGTAGAGCAAATGAAAATGTTGCACTTAAGTACTCAAGTAATAGACCACCCATTGCTTCCCTGAGTCAGACTGAAGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 90 bp CATTCTGACATATCCGACTTCAAATGCAGCTTAAGTCGGCTACTGTaGGTGAGGGCATTCAGTGATGAACTATTTTGGGAAGAAGGAATA +
Preference number: 5 (lower is better)
Translates to: HSDISDFKCSLSRLL*VRAFSDELFWEEGI
Trigger: TATTCCTTCTTCCCAAAATAGTTCATCACTGAATGCCCTCACCCACAGTAGCCGACTTAAGCTGCATTTGAAGTCGGATATGTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGCTGACCTCTTGGGTTaGTTTTCTGGCTACTTGAGA +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLADLLG*FSGYLR
Trigger: TCTCAAGTAGCCAGAAAACAAACCCAAGAGGTCAGC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGTGATAGCTGACCTCTaGGGTTTGTTTTCTGGCTAC +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTVIADL*GLFSGY
Trigger: GTAGCCAGAAAACAAACCCAAGAGGTCAGCTATCAC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp TTAGACATTCTATTCTTCAGTATTGATGGAGCTGGGCTCTTAAGCTaGGGCAGGCTGCACTTTGTTGTCAGTTTGTGTTCTGTTGTACAT +
Preference number: 5 (lower is better)
Translates to: LDILFFSIDGAGLLS*GRLHFVVSLCSVVH
Trigger: ATGTACAACAGAACACAAACTGACAACAAAGTGCAGCCTGCCTCAGCTTAAGAGCCCAGCTCCATCAATACTGAAGAATAGAATGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp TGGTCTTTGTTTAACTTGAAGGTTAGACATTCTATTCTTCAGTATTaGTGGAGCTGGGCTCTTAAGCTGAGGCAGGCTGCACTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: WSLFNLKVRHSILQY*WSWALKLRQAALCC
Trigger: ACAACAAAGTGCAGCCTGCCTCAGCTTAAGAGCCCAGCTCCATCAATACTGAAGAATAGAATGTCTAACCTTCAAGTTAAACAAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp CGACAGAGCCTGTATCGTTCAGGGTCAATATTCCGACTGTTTCTCTaGGCAGCTTTTAGCTTTGCAATTTCTGCCTTCAATTCTCTAATT +
Preference number: 5 (lower is better)
Translates to: RQSLYRSGSIFRLFL*AAFSFAISAFNSLI
Trigger: AATTAGAGAATTGAAGGCAGAAATTGCAAAGCTAAAAGCTGCTCAGAGAAACAGTCGGAATATTGACCCTGAACGATACAGGCTCTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCAATGTTTCTTCTATGTaGCTGGCAGCGGGACTAATC +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTNVSSM*LAAGLI
Trigger: GATTAGTCCCGCTGCCAGCAACATAGAAGAAACATT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGCATCATTTCTTCCTTaGCCTTCAACTGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTASFLP*PSTEPL
Trigger: AAGAGGCTCAGTTGAAGGCAAAGGAAGAAATGATGC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTCCAGACTCCAGAATGTaGAGATTCCTAGTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLPDSRM*RFLVSG
Trigger: ACCTGAAACTAGGAATCTCAACATTCTGGAGTCTGG...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTACTCATCCTCAAGTCTaGCTATGTTGGTACAAGGCA +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLTHPQV*LCWYKA
Trigger: TGCCTTGTACCAACATAGCAAGACTTGAGGATGAGT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS GCA 90 bp CCGTTTTCTAGAAAATGTAGCTTGCTCCCTTTCAGAACTGCTAACTaGCCCACATACTTTACAGCTTGTTGTACAATTTGGATTGCATTC +
Preference number: 5 (lower is better)
Translates to: PFSRKCSLLPFRTAN*PTYFTACCTIWIAF
Trigger: GAATGCAATCCAAATTGTACAACAAGCTGTAAAGTATGTGGGGCAGTTAGCAGTTCTGAAAGGGAGCAAGCTACATTTTCTAGAAAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGAGGCAGGCTGCACTTaGTTGTCAGTTTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSEAGCT*LSVCVL
Trigger: CAGAACACAAACTGACAACAAAGTGCAGCCTGCCTC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGAGGCAGGCTGCACTTaGTTGTCAGTTTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTEAGCT*LSVCVL
Trigger: CAGAACACAAACTGACAACAAAGTGCAGCCTGCCTC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATCCACAAATTCTGTCTaGGTCTGGGTCATCACCAGG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSTNSV*VWVITR
Trigger: CCTGGTGATGACCCAGACCAAGACAGAATTTGTGGA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTCCACAAATTCTGTCTaGGTCTGGGTCATCACCAGG +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSTNSV*VWVITR
Trigger: CCTGGTGATGACCCAGACCAAGACAGAATTTGTGGA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCACTCCTTTGGTTTGCTaGTTCCGAAAGTGCAGATAT +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTTPLVC*FRKCRY
Trigger: ATATCTGCACTTTCGGAACAAGCAAACCAAAGGAGT...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGCTCATAGACACGCTTaGGTACACCTTTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLAHRHA*VHLYSY
Trigger: GTAAGAATAAAGGTGTACCAAAGCGTGTCTATGAGC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp CAGTGTTTCATTAGCACTACTAGCTGCTCAAAAGCACATGCAGTCTaGATAGTAAGTGACTGGATTGCTCGATCAGAAGAAAACAAGTTA +
Preference number: 5 (lower is better)
Translates to: QCFISTTSCSKAHAV*IVSDWIARSEENKL
Trigger: TAACTTGTTTTCTTCTGATCGAGCAATCCAGTCACTTACTATTCAGACTGCATGTGCTTTTGAGCAGCTAGTAGTGCTAATGAAACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGCAGGCTGCACTTTGTaGTCAGTTTGTGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTAGCTL*SVCVLL
Trigger: CAACAGAACACAAACTGACAACAAAGTGCAGCCTGC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCTGACCTCTTGGGTTaGTTTTCTGGCTACTTGAGA +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSADLLG*FSGYLR
Trigger: TCTCAAGTAGCCAGAAAACAAACCCAAGAGGTCAGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGTGATAGCTGACCTCTaGGGTTTGTTTTCTGGCTAC +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFVIADL*GLFSGY
Trigger: GTAGCCAGAAAACAAACCCAAGAGGTCAGCTATCAC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGAGCAGCTTTTAGCTTaGCAATTTCTGCCTTCAATT +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLEQLLA*QFLPSI
Trigger: AATTGAAGGCAGAAATTGCAAAGCTAAAAGCTGCTC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAAGCTTCCAGAATTCTaGCATGGCGGATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFKLPEF*HGGCYG
Trigger: ACCATAGCATCCGCCATGCAAGAATTCTGGAAGCTT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAAGCTTCCAGAATTCTaGCATGGCGGATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTKLPEF*HGGCYG
Trigger: ACCATAGCATCCGCCATGCAAGAATTCTGGAAGCTT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTCAAGTCTTGCTATGTaGGTACAAGGCAGTAAATCA +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTSSLAM*VQGSKS
Trigger: TGATTTACTGCCTTGTACCAACATAGCAAGACTTGA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 90 bp TTAAGTCGGCTACTGTGGGTGAGGGCATTCAGTGATGAACTATTTTaGGAAGAAGGAATATCAAGAATATCACCGCTGTTATTTCTATTA +
Preference number: 5 (lower is better)
Translates to: LSRLLWVRAFSDELF*EEGISRISPLLFLL
Trigger: TAATAGAAATAACAGCGGTGATATTCTTGATATTCCTTCTTCCCAAAATAGTTCATCACTGAATGCCCTCACCCACAGTAGCCGACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGTGCAACATTTTCATTaGCTCTACTGGGGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTVQHFH*LYWGQK
Trigger: TTTCTGCCCCCAGTAGAGCAAATGAAAATGTTGCAC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGTGCAACATTTTCATTaGCTCTACTGGGGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFVQHFH*LYWGQK
Trigger: TTTCTGCCCCCAGTAGAGCAAATGAAAATGTTGCAC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATGCAAAAAGACAGGTATaGAAGCCTTCGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNAKRQV*KPSKAL
Trigger: AAGAGCCTTCGAAGGCTTCAATACCTGTCTTTTTGC...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGCAAAAAGACAGGTATaGAAGCCTTCGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFAKRQV*KPSKAL
Trigger: AAGAGCCTTCGAAGGCTTCAATACCTGTCTTTTTGC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAAACACTCCTTTGGTTaGCTTGTTCCGAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSKHSFG*LVPKVQ
Trigger: CTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTTT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATAAACACTCCTTTGGTTaGCTTGTTCCGAAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNKHSFG*LVPKVQ
Trigger: CTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTTT...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTAATAAAAACACTCCTTaGGTTTGCTTGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLNKNTP*VCLFRK
Trigger: CTTTCGGAACAAGCAAACCAAAGGAGTGTTTTTATT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCAATCATTGCAGTTTTaGAATTTCCACCCAGACTTT +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTQSLQF*NFHPDF
Trigger: AAAGTCTGGGTGGAAATTCAAAAACTGCAATGATTG...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCTATCATGGCTTGAGTTaGGTTTATACTTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTYHGLS*VYTFQL
Trigger: CAGTTGGAAAGTATAAACCAAACTCAAGCCATGATA...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGCATCATTTCTTCCTTaGCCTTCAACTGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTASFLP*PSTEPL
Trigger: AAGAGGCTCAGTTGAAGGCAAAGGAAGAAATGATGC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCTGAGCCATTTCTTTaGCAATCTGGATTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSAEPFL*QSGFLA
Trigger: TGCAAGGAATCCAGATTGCAAAAGAAATGGCTCAGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCGCTGAGCCATTTCTTTaGCAATCTGGATTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFAEPFL*QSGFLA
Trigger: TGCAAGGAATCCAGATTGCAAAAGAAATGGCTCAGC...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCCAGACTCCAGAATGTaGAGATTCCTAGTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFPDSRM*RFLVSG
Trigger: ACCTGAAACTAGGAATCTCAACATTCTGGAGTCTGG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAACTCATCCTCAAGTCTaGCTATGTTGGTACAAGGCA +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSTHPQV*LCWYKA
Trigger: TGCCTTGTACCAACATAGCAAGACTTGAGGATGAGT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp GAAACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCGTTGTACAATTTGGATaGCATTCTTTTGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: ETGSYTLEHTIQNGNQLTVVQFG*HSFEPL
Trigger: AAGAGGCTCAAAAGAATGCAATCCAAATTGTACAAC...GGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTGTTGTACAATTTGGATaGCATTCTTTTGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLVVQFG*HSFEPL
Trigger: AAGAGGCTCAAAAGAATGCAATCCAAATTGTACAAC...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp ACAGGAAGCTACACCCTTGAACATACTATTCAAAATGGCAACCAGTTAACCCTTACACTGGCAGCTTTATaGTTACCGTTTTCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: TGSYTLEHTIQNGNQLTLTLAAL*LPFSRK
Trigger: TTTTCTAGAAAACGGTAACAATAAAGCTGCCAGTGT...AAGGGTTAACTGGTTGCCATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS GCA 90 bp GGTGTTCTGAACTACAGTTTCTTCTTCGGGAAGAATTGTATTTTCTaGGGATCTTTCCTGTTTATTTGCAAGAAAGGAACTTTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: GVLNYSFFFGKNCIF*GSFLFICKKGTFWS
Trigger: AGACCAAAAAGTTCCTTTCTTGCAAATAAACAGGAAAGATCCGCAGAAAATACAATTCTTCCCGAAGAAGAAACTGTAGTTCAGAACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAACTCCTTTGGTTTGCTaGTTCCGAAAGTGCAGATAT +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSTPLVC*FRKCRY
Trigger: ATATCTGCACTTTCGGAACAAGCAAACCAAAGGAGT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACATGCAATCTGGATTCCTaGCATCATTTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTCNLDS*HHFFLC
Trigger: GCAAAGGAAGAAATGATGCAAGGAATCCAGATTGCA...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTGCAATCTGGATTCCTaGCATCATTTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFCNLDS*HHFFLC
Trigger: GCAAAGGAAGAAATGATGCAAGGAATCCAGATTGCA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATTTGAGAAGAAAGCTCTaGCTGAGCCATTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNLRRKL*LSHFFC
Trigger: GCAAAAGAAATGGCTCAGCAAGAGCTTTCTTCTCAA...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCTTGAGAAGAAAGCTCTaGCTGAGCCATTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFLRRKL*LSHFFC
Trigger: GCAAAAGAAATGGCTCAGCAAGAGCTTTCTTCTCAA...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGCTCATAGACACGCTTaGGTACACCTTTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSAHRHA*VHLYSY
Trigger: GTAAGAATAAAGGTGTACCAAAGCGTGTCTATGAGC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 90 bp TGTCTGGCTAGCGTAGTGAGGATGACATTCATCAAAAGACCAGAATaGAACATCATAAATAAAATTATAAACTTGTTTCGTGTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CLASVVRMTFIKRPE*NIINKIINLFRVRV
Trigger: CACCCTGACACGAAACAAGTTTATAATTTTATTTATGATGTTTCATTCTGGTCTTTTGATGAATGTCATCCTCACTACGCTAGCCAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATGAGCAGCTTTTAGCTTaGCAATTTCTGCCTTCAATT +
Preference number: 5 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNEQLLA*QFLPSI
Trigger: AATTGAAGGCAGAAATTGCAAAGCTAAAAGCTGCTC...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCATCAAGTCTTGCTATGTaGGTACAAGGCAGTAAATCA +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSSLAM*VQGSKS
Trigger: TGATTTACTGCCTTGTACCAACATAGCAAGACTTGA...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAAATCACTGGCCAAGTaGCGAATACTTTCAACACAA +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTKSLAK*RILSTQ
Trigger: TTGTGTTGAAAGTATTCGCAACTTGGCCAGTGATTT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACAGGAAGCTACACCCTaGAACATACTATTCAAAATG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSQEATP*NILFKM
Trigger: CATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCCAGGAAGCTACACCCTaGAACATACTATTCAAAATG +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFQEATP*NILFKM
Trigger: CATTTTGAATAGTATGTTCAAGGGTGTAGCTTCCTG...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAAATAAAAACACTCCTTaGGTTTGCTTGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTNKNTP*VCLFRK
Trigger: CTTTCGGAACAAGCAAACCAAAGGAGTGTTTTTATT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACACAATCATTGCAGTTTTaGAATTTCCACCCAGACTTT +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTQSLQF*NFHPDF
Trigger: AAAGTCTGGGTGGAAATTCAAAAACTGCAATGATTG...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAGAACCAATCAATTCTTaGCAAATTCCAGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTEPINS*QIPGRK
Trigger: CTTTCTTCCTGGAATTTGCAAAGAATTGATTGGTTC...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAGAACCAATCAATTCTTaGCAAATTCCAGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSEPINS*QIPGRK
Trigger: CTTTCTTCCTGGAATTTGCAAAGAATTGATTGGTTC...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp AGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCTCTTCAGCTTGTTGTACAATTaGGATTGCATTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RFTNTVLTAMTVFTYNLFSLLYN*DCILLS
Trigger: GCTCAAAAGAATGCAATCCAAATTGTACAACAAGCT...GAAGAGATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCAAGCTTGTTGTACAATTaGGATTGCATTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSSLLYN*DCILLS
Trigger: GCTCAAAAGAATGCAATCCAAATTGTACAACAAGCT...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACACAAGGTTCACTAATACTGTTCTGACTGCAATGACTGTATTTACTTACAATCACATACTTTACAGCTaGTTGTACAATTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: HTRFTNTVLTAMTVFTYNHILYS*LYNLDC
Trigger: GCAATCCAAATTGTACAACAAGCTGTAAAGTATGTG...ATTGTAAGTAAATACAGTCATTGCAGTCAGAACAGTATTAGTGAACCTTGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp CACCCAAGCATAGTTACAAAGTATCTCTTCAAATTATACATACTCTTGAGGTCACACATACTTTACAGCTaGTTGTACAATTTGGATTGC +
Preference number: 5 (lower is better)
Translates to: HPSIVTKYLFKLYILLRSHILYS*LYNLDC
Trigger: GCAATCCAAATTGTACAACAAGCTGTAAAGTATGTG...TGACCTCAAGAGTATGTATAATTTGAAGAGATACTTTGTAACTATGCTTGGGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS-3UTR CAA 90 bp TCCACTCATGAGAAAATAACCCTTTATAAACGACTAATGAACCAACTACAGACAACACTGGCAGCTTTATaGTTACCGTTTTCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: STHEKITLYKRLMNQLQTTLAAL*LPFSRK
Trigger: TTTTCTAGAAAACGGTAACAATAAAGCTGCCAGTGT...TGTCTGTAGTTGGTTCATTAGTCGTTTATAAAGGGTTATTTTCTCATGAGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS GCA 72 bp AAGTCCGGCTTCCCGGTCCCAGCAGAGACGCTGCCTTaGGCCCTTCGTTCGGGGACCCCTTCGCCGCCGACC +
Preference number: 6 (lower is better)
Translates to: KSGFPVPAETLP*ALRSGTPSPPT
Trigger: GGTCGGCGGCGAAGGGGTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGCTGGGACCGGGAAGCCGGACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS CAA 72 bp GAAGTCCGGCTTCCCGGTCCCAGCAGAGACGCTGCCTaGCGCCCTTCGTTCGGGGACCCCTTCGCCGCCGAC +
Preference number: 6 (lower is better)
Translates to: EVRLPGPSRDAA*RPSFGDPFAAD
Trigger: GTCGGCGGCGAAGGGGTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGCTGGGACCGGGAAGCCGGACTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS CAA 90 bp AGAGGCCCTGAAGTCCGGCTTCCCGGTCCCAGCAGAGACGCTGCCTaGCGCCCTTCGTTCGGGGACCCCTTCGCCGCCGACCTGGAATGC +
Preference number: 6 (lower is better)
Translates to: RGPEVRLPGPSRDAA*RPSFGDPFAADLEC
Trigger: GCATTCCAGGTCGGCGGCGAAGGGGTCCCCGAACGAAGGGCGCAAGGCAGCGTCTCTGCTGGGACCGGGAAGCCGGACTTCAGGGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS GCA 72 bp TCGCCTGTAGGGAAAGCGTCCGCACGCCCTCCCCAGTaGCGAAACTTCGCCCCTCCGCAGGGTCCGGCACCT +
Preference number: 6 (lower is better)
Translates to: SPVGKASARPPQ*RNFAPPQGPAP
Trigger: AGGTGCCGGACCCTGCGGAGGGGCGAAGTTTCGGCACTGGGGAGGGCGTGCGGACGCTTTCCCTACAGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367350.5
CDS CCA 72 bp GCCTACACATCAGTATTCACACCCACTGAATCCTACTaGGTGTGCATTCCTCTGAGCTCACTGCTGGGGATG +
Preference number: 6 (lower is better)
Translates to: AYTSVFTPTESY*VCIPLSSLLGM
Trigger: CATCCCCAGCAGTGAGCTCAGAGGAATGCACACCCAGTAGGATTCAGTGGGTGTGAATACTGATGTGTAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 72 bp CTGCTGGGGATGAGCCATGGAGCTCATAGACACGCTTaGGTACACCTTTATTCTTACTGCCGTCAATCCCGC +
Preference number: 6 (lower is better)
Translates to: LLGMSHGAHRHA*VHLYSYCRQSR
Trigger: GCGGGATTGACGGCAGTAAGAATAAAGGTGTACCAAAGCGTGTCTATGAGCTCCATGGCTCATCCCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp ATACTCACACCTTCCTTTAGTCGATCTCCATTAGTGTaGGCCGTAGAGCAGCGCTCACTGCCTGCCAGATCT +
Preference number: 6 (lower is better)
Translates to: ILTPSFSRSPLV*AVEQRSLPARS
Trigger: AGATCTGGCAGGCAGTGAGCGCTGCTCTACGGCTCACACTAATGGAGATCGACTAAAGGAAGGTGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS GCA 72 bp ACATCAGTATTCACACCCACTGAATCCTACTGGGTGTaGATTCCTCTGAGCTCACTGCTGGGGATGAGCCAT +
Preference number: 6 (lower is better)
Translates to: TSVFTPTESYWV*IPLSSLLGMSH
Trigger: ATGGCTCATCCCCAGCAGTGAGCTCAGAGGAATGCACACCCAGTAGGATTCAGTGGGTGTGAATACTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp TTCGTTGTCAAGTGTCCTGATCTAACAACTTCAGTCTaGCTCAGGGAAGCAATGGGTGGTCTATTACTTGAG +
Preference number: 6 (lower is better)
Translates to: FVVKCPDLTTSV*LREAMGGLLLE
Trigger: CTCAAGTAATAGACCACCCATTGCTTCCCTGAGTCAGACTGAAGTTGTTAGATCAGGACACTTGACAACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp CAACTTGCTCTGAGTAGGTTTCGTTGTCAAGTGTCCTaGTCTAACAACTTCAGTCTGACTCAGGGAAGCAAT +
Preference number: 6 (lower is better)
Translates to: QLALSRFRCQVS*SNNFSLTQGSN
Trigger: ATTGCTTCCCTGAGTCAGACTGAAGTTGTTAGATCAGGACACTTGACAACGAAACCTACTCAGAGCAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 72 bp ATATCCGACTTCAAATGCAGCTTAAGTCGGCTACTGTaGGTGAGGGCATTCAGTGATGAACTATTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: ISDFKCSLSRLL*VRAFSDELFWE
Trigger: TTCCCAAAATAGTTCATCACTGAATGCCCTCACCCACAGTAGCCGACTTAAGCTGCATTTGAAGTCGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 72 bp GCATCCATGAATTCCTCCTGGACACTGGCAGCTTTATaGTTACCGTTTTCTAGAAAATGTAGCTTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: ASMNSSWTLAAL*LPFSRKCSLLP
Trigger: AGGGAGCAAGCTACATTTTCTAGAAAACGGTAACAATAAAGCTGCCAGTGTCCAGGAGGAATTCATGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp AGCAAAGATGATTCTTTGTTCCTTGTAGTTCTCCTCTaGAGTGCCAATCTACCTACAGGATTAGGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: SKDDSLFLVVLL*SANLPTGLGVR
Trigger: CCTTACCCCTAATCCTGTAGGTAGATTGGCACTTCAGAGGAGAACTACAAGGAACAAAGAATCATCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp TTTAACTTGAAGGTTAGACATTCTATTCTTCAGTATTaGTGGAGCTGGGCTCTTAAGCTGAGGCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: FNLKVRHSILQY*WSWALKLRQAA
Trigger: TGCAGCCTGCCTCAGCTTAAGAGCCCAGCTCCATCAATACTGAAGAATAGAATGTCTAACCTTCAAGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp TGTCAGGGTGTTCCACAGTTATTTCTTTCCCACTCATaGAGACTACCTGGGATGCTTTTTCAATCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: CQGVPQLFLSHS*RLPGMLFQSSL
Trigger: GAGAGAAGATTGAAAAAGCATCCCAGGTAGTCTTCATGAGTGGGAAAGAAATAACTGTGGAACACCCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 72 bp CTTCTTGTCTCAACTCATCCTCAAGTCTTGCTATGTTaGTACAAGGCAGTAAATCACTCAGCCAGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LLVSTHPQVLLC*YKAVNHSASVS
Trigger: TGAAACACTGGCTGAGTGATTTACTGCCTTGTACCAACATAGCAAGACTTGAGGATGAGTTGAGACAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 72 bp ACTTCTTGTCTCAACTCATCCTCAAGTCTTGCTATGTaGGTACAAGGCAGTAAATCACTCAGCCAGTGTTTC +
Preference number: 6 (lower is better)
Translates to: TSCLNSSSSLAM*VQGSKSLSQCF
Trigger: GAAACACTGGCTGAGTGATTTACTGCCTTGTACCAACATAGCAAGACTTGAGGATGAGTTGAGACAAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp TTTCCTGTTCCCAACACTTTGATATCCAACTTGCTCTaGGTAGGTTTCGTTGTCAAGTGTCCTGATCTAACA +
Preference number: 6 (lower is better)
Translates to: FPVPNTLISNLL*VGFVVKCPDLT
Trigger: TGTTAGATCAGGACACTTGACAACGAAACCTACTCAGAGCAAGTTGGATATCAAAGTGTTGGGAACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp CTGTATCGTTCAGGGTCAATATTCCGACTGTTTCTCTaGGCAGCTTTTAGCTTTGCAATTTCTGCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: LYRSGSIFRLFL*AAFSFAISAFN
Trigger: ATTGAAGGCAGAAATTGCAAAGCTAAAAGCTGCTCAGAGAAACAGTCGGAATATTGACCCTGAACGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp ATTAGCACTACTAGCTGCTCAAAAGCACATGCAGTCTaGATAGTAAGTGACTGGATTGCTCGATCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: ISTTSCSKAHAV*IVSDWIARSEE
Trigger: TTCTTCTGATCGAGCAATCCAGTCACTTACTATTCAGACTGCATGTGCTTTTGAGCAGCTAGTAGTGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 90 bp TTCCTGCAGAGGTGTTCTGAACTACAGTTTCTTCTTCGGGAAGAATaGTATTTTCTGCGGATCTTTCCTGTTTATTTGCAAGAAAGGAAC +
Preference number: 6 (lower is better)
Translates to: FLQRCSELQFLLREE*YFLRIFPVYLQERN
Trigger: GTTCCTTTCTTGCAAATAAACAGGAAAGATCCGCAGAAAATACAATTCTTCCCGAAGAAGAAACTGTAGTTCAGAACACCTCTGCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 72 bp TCACTGGCCAAGTTGCGAATACTTTCAACACAAGTCTaGAGAAGATTTATATCACTATGGCATCCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: SLAKLRILSTQV*RRFISLWHPFS
Trigger: ACTGAAAGGATGCCATAGTGATATAAATCTTCTCCAGACTTGTGTTGAAAGTATTCGCAACTTGGCCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 90 bp CAGCCATGTAAGAACAGATTCACGATAAGGAATAAAAACACTCCTTaGGTTTGCTTGTTCCGAAAGTGCAGATATAACTTTTCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: QPCKNRFTIRNKNTP*VCLFRKCRYNFSQS
Trigger: ACTTTGGGAAAAGTTATATCTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTTTTTATTCCTTATCGTGAATCTGTTCTTACATGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS TCA 72 bp TATGTTTTCAATTTGCTGCTGATAGCATTGGCTTCCTaGATCATCATTGAGAGTTTCATAGAGCTCCAAGTT +
Preference number: 6 (lower is better)
Translates to: YVFNLLLIALAS*IIIESFIELQV
Trigger: AACTTGGAGCTCTATGAAACTCTCAATGATGATTCAGGAAGCCAATGCTATCAGCAGCAAATTGAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CCA 72 bp AATTCTGGAGCACGATTAACCATCCTCTTGAAATCTTaGTATTCAAAGTTTTCTTCTTGTACTTGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: NSGARLTILLKS*YSKFSSCTCLL
Trigger: CAGAAGGCAAGTACAAGAAGAAAACTTTGAATACCAAGATTTCAAGAGGATGGTTAATCGTGCTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4
CDS CAA 72 bp AAGAACAGATTCACGATAAGGAATAAAAACACTCCTTaGGTTTGCTTGTTCCGAAAGTGCAGATATAACTTT +
Preference number: 6 (lower is better)
Translates to: KNRFTIRNKNTP*VCLFRKCRYNF
Trigger: AAAGTTATATCTGCACTTTCGGAACAAGCAAACCAAAGGAGTGTTTTTATTCCTTATCGTGAATCTGTTCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367350.5
ENST00000614960.4