RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF13B (Homo sapiens)

Ensembl gene IDs: ENSG00000197892

Ensembl transcript IDs: ENST00000521515.1, ENST00000522355.5, ENST00000522846.1, ENST00000523130.1, ENST00000523968.1, ENST00000524189.6

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTaGCTGCCAAGTGCTGGCCCGGGGTCAGCGGGGCTCACTGCCTTG +
Preference number: 1 (lower is better)
Translates to: GGQPALAHHSGDRTS*LPSAGPGSAGLTAL
Trigger: CAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp CGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCCAAGTaGTGGCCCGGGGTCAGCGGGGCTCACTGCCTTGGTGACCACGTC +
Preference number: 1 (lower is better)
Translates to: RPGPPLWRPHLLPAK*WPGVSGAHCLGDHV
Trigger: GACGTGGTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp GGCCACCCCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTaGGCCTGGGGGCGTGGCTGCTGTGAGGGTCTGGAGACTAACCAG +
Preference number: 1 (lower is better)
Translates to: GHPGSFRLSRPHHAR*AWGRGCCEGLETNQ
Trigger: CTGGTTAGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGGGGTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp CGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGCTaGTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGC +
Preference number: 1 (lower is better)
Translates to: RLSRPHHARWAWGRG*CEGLETNQHTPCTS
Trigger: GCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp GGGTGGATGGCTCAGCCACCACGAAGTGCCAGGTCCCACCCACGCTaGCCGTCCGCCACCATTCCCAGAGCGTCCCCACTACACGGCCCA +
Preference number: 1 (lower is better)
Translates to: GWMAQPPRSARSHPR*PSATIPRASPLHGP
Trigger: TGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGGCGGACGGGCAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp GCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCCACCACGAAGTaGCAGGTCCCACCCACGCTGCCCGTCCGCCACCATTCCCAGAGC +
Preference number: 1 (lower is better)
Translates to: ATGGRCWVDGSATTK*QVPPTLPVRHHSQS
Trigger: GCTCTGGGAATGGTGGCGGACGGGCAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp GGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTaGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAG +
Preference number: 1 (lower is better)
Translates to: GPSASPAAAFVSLAN*GEKDNLSSQPGLGQ
Trigger: CTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCCAAGTGCTaGCCCGGGGTCAGCGGGGCTCACTGCCTTGGTGACCACGTCACT +
Preference number: 1 (lower is better)
Translates to: PGPPLWRPHLLPAKC*PGVSGAHCLGDHVT
Trigger: AGTGACGTGGTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CCTGGCACCAAAGGCTCTGGGAGCATAAGTGCCCCAGCCAGGAGGTaGAGGCCACCCCGGAAGCTTCCGGCTGTCCCGCCCACACCATGC +
Preference number: 1 (lower is better)
Translates to: PGTKGSGSISAPARR*RPPRKLPAVPPTPC
Trigger: GCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGGGGTGGCCTCCACCTCCTGGCTGGGGCACTTATGCTCCCAGAGCCTTTGGTGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp AAAGAAGATAGAAGACGGAGGCCAGCCCGCCCTGGCCCACCACTCTaGAGACCGCACCTCCTGCCTGCCAAGTGCTGGCCCGGGGTCAGC +
Preference number: 1 (lower is better)
Translates to: KEDRRRRPARPGPPL*RPHLLPAKCWPGVS
Trigger: GCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTCTTCTATCTTCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CCCCAGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTaGATGGCTCAGCCACCACGAAGTGCCAGGTCCCACCCACGCTGC +
Preference number: 1 (lower is better)
Translates to: PQDFPKMVLQEAAAG*MAQPPRSARSHPRC
Trigger: GCAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CGTCCCCCAGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTaGGTGGATGGCTCAGCCACCACGAAGTGCCAGGTCCCACCCACG +
Preference number: 1 (lower is better)
Translates to: RPPGLSQDGATGGRC*VDGSATTKCQVPPT
Trigger: CGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCTGGGGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp ACCCCCATCCCACAAACCTGGCACCAAAGGCTCTGGGAGCATAAGTaGCCCAGCCAGGAGGTGGAGGCCACCCCGGAAGCTTCCGGCTGT +
Preference number: 1 (lower is better)
Translates to: TPIPQTWHQRLWEHK*PSQEVEATPEASGC
Trigger: ACAGCCGGAAGCTTCCGGGGTGGCCTCCACCTCCTGGCTGGGGCACTTATGCTCCCAGAGCCTTTGGTGCCAGGTTTGTGGGATGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp GTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAGCAGCAGTaGTGGCCTCTCACCCAGGCCATAGTGACACCAGCGGACCCAAAA +
Preference number: 1 (lower is better)
Translates to: VPTTRPRRFPSGQQQ*WPLTQAIVTPADPK
Trigger: TTTTGGGTCCGCTGGTGTCACTATGGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp ACACGTCCCCCAGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTaGTGGGTGGATGGCTCAGCCACCACGAAGTGCCAGGTCCCACCC +
Preference number: 1 (lower is better)
Translates to: TRPPGLSQDGATGGR*WVDGSATTKCQVPP
Trigger: GGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCTGGGGGACGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATaGCTCAGCCACCACGAAGTGCCAGGTCCCACCCACGCTGCCCGT +
Preference number: 1 (lower is better)
Translates to: RTFPRWCYRRPLLGG*LSHHEVPGPTHAAR
Trigger: ACGGGCAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAGCAGCAGTGCTaGCCTCTCACCCAGGCCATAGTGACACCAGCGGACCCAAAAACA +
Preference number: 1 (lower is better)
Translates to: PTTRPRRFPSGQQQC*PLTQAIVTPADPKT
Trigger: TGTTTTTGGGTCCGCTGGTGTCACTATGGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp CTCGCAGCCAGGGCTGGGACAGGCCCACCATGGAGACTACTCTGTTaGCGCCTTCAAGTCCCTAGAGAACCAGAGCCTTCCGCAGCGCTT +
Preference number: 1 (lower is better)
Translates to: LAARAGTGPPWRLLC*RLQVPREPEPSAAL
Trigger: AAGCGCTGCGGAAGGCTCTGGTTCTCTAGGGACTTGAAGGCGCCAACAGAGTAGTCTCCATGGTGGGCCTGTCCCAGCCCTGGCTGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 90 bp CCCTGCGGGCACCCAGAACCTTCCATCCACCTGAGGAGGCACAGTTaGGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: PCGHPEPSIHLRRHS*GPHFTRVQKKQSFQ
Trigger: CTGGAAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTTCTGGGTGCCCGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp GCGCTGGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAGTTCTaGTTCTCAGGAGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGC +
Preference number: 1 (lower is better)
Translates to: ALGEWKENLSMLRQF*FSGDSLLRSCSNSC
Trigger: GCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 90 bp GAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCATaGAGACTACTCTGTTGGCGCCTTCAAGTCCCTAGAGAACCAGAG +
Preference number: 1 (lower is better)
Translates to: ERQPVLAARAGTGPP*RLLCWRLQVPREPE
Trigger: CTCTGGTTCTCTAGGGACTTGAAGGCGCCAACAGAGTAGTCTCCATGGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 90 bp CTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTaGCTCCCGTCTTGTGTGCGTGCGCACAGCCACCAACACACACTC +
Preference number: 1 (lower is better)
Translates to: LWGFNGSVSWAGSTG*LPSCVRAHSHQHTL
Trigger: GAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp GGTCAGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTaGGTGCGCACAGCCACCAACACACACTCTCAGGACTTCCCGTTT +
Preference number: 1 (lower is better)
Translates to: GQYLGQEAQGDSRLV*VRTATNTHSQDFPF
Trigger: AAACGGGAAGTCCTGAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 90 bp TCCAAGTTAAGAGTAAGGCCACTGTGGATCCGCAATAGAGGGATGTaGGGAGGGGGCTTTATCCTCTGCCGTCCCCAGGACCCTCCACCT +
Preference number: 1 (lower is better)
Translates to: SKLRVRPLWIRNRGM*GGGFILCRPQDPPP
Trigger: AGGTGGAGGGTCCTGGGGACGGCAGAGGATAAAGCCCCCTCCTCACATCCCTCTATTGCGGATCCACAGTGGCCTTACTCTTAACTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp ATGCTCCGGCAGTTCTGCTTCTCAGGAGACAGCCTTCTCCGGAGCTaGTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCA +
Preference number: 1 (lower is better)
Translates to: MLRQFCFSGDSLLRS*SNSCSYISLWRSSA
Trigger: TGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 90 bp TTAAGCGTTGCTGAGCGCTGGGCGAGTGGAAAGAAAACCTGTCCATaGTCCGGCAGTTCTGCTTCTCAGGAGACAGCCTTCTCCGGAGCT +
Preference number: 1 (lower is better)
Translates to: LSVAERWASGKKTCP*SGSSASQETAFSGA
Trigger: AGCTCCGGAGAAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 90 bp GTTAAAGGGCAAGGCAGAGGTGACAGCTCTTCATCCAGGGACAGGTaGCACAGGGTTCCCTCAAAATCGGCTAAGGACAGGGAGAGCCCT +
Preference number: 1 (lower is better)
Translates to: VKGQGRGDSSSSRDR*HRVPSKSAKDRESP
Trigger: AGGGCTCTCCCTGTCCTTAGCCGATTTTGAGGGAACCCTGTGGCACCTGTCCCTGGATGAAGAGCTGTCACCTCTGCCTTGCCCTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTaGGCACAGCCACCAACACACACTCTCAGGACTTCCCGTTTCACA +
Preference number: 1 (lower is better)
Translates to: SILGRKHRVTPVLCA*AQPPTHTLRTSRFT
Trigger: TGTGAAACGGGAAGTCCTGAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 90 bp TTCAACGTTGCTTCTCTCTCCTCAGCCCACTGTCTTAAGCGTTGCTaGGCGCTGGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAG +
Preference number: 1 (lower is better)
Translates to: FNVASLSSAHCLKRC*ALGEWKENLSMLRQ
Trigger: CTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACAGTGGGCTGAGGAGAGAGAAGCAACGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp TTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGTaGACAGGGCCTGGGCCCAAATCCACCTGCTCAAGTCAGGAACTC +
Preference number: 1 (lower is better)
Translates to: FPSHKLTLVRTEKQE*TGPGPKSTCSSQEL
Trigger: GAGTTCCTGACTTGAGCAGGTGGATTTGGGCCCAGGCCCTGTTCACTCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp CTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAAAGATaGTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAG +
Preference number: 1 (lower is better)
Translates to: LQPTRKAPRTLWRER*FGGSMGQYLGQEAQ
Trigger: CTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp TTGCTTCTCTCTCCTCAGCCCACTGTCTTAAGCGTTGCTGAGCGCTaGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAGTTCTGCT +
Preference number: 1 (lower is better)
Translates to: LLLSPQPTVLSVAER*ASGKKTCPCSGSSA
Trigger: AGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACAGTGGGCTGAGGAGAGAGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 90 bp CAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGTGAACAGGGCCTaGGCCCAAATCCACCTGCTCAAGTCAGGAACTCTGGCTCGTTCT +
Preference number: 1 (lower is better)
Translates to: QADISPHREARVNRA*AQIHLLKSGTLARS
Trigger: AGAACGAGCCAGAGTTCCTGACTTGAGCAGGTGGATTTGGGCCCAGGCCCTGTTCACTCTTGCTTCTCGGTGCGGACTAATGTCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp AGGCACCACGGACTTTGTGGAGAGAAAGATGCTTTGGGGGTTCAATaGGTCAGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTG +
Preference number: 1 (lower is better)
Translates to: RHHGLCGEKDALGVQ*VSILGRKHRVTPVL
Trigger: CAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 90 bp ACTTCACTGGACACCTCGCTGGAGGAGTCTCCGTCTACATCCAGCTaGTCAGAACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCA +
Preference number: 1 (lower is better)
Translates to: TSLDTSLEESPSTSS*SELFSFFMEGSWSS
Trigger: TGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 90 bp TTCTGCTTCTCAGGAGACAGCCTTCTCCGGAGCTGCTCCAATTCGTaGTCATACATAAGCCTCTGGCGCTCCAGTGCAGATCGTTTTTCT +
Preference number: 1 (lower is better)
Translates to: FCFSGDSLLRSCSNS*SYISLWRSSADRFS
Trigger: AGAAAAACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCTCCTGAGAAGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp GTGAAACAGGTTTTAAAAAGAAAGCCGCTGTGCTGGGAAGCGGGTTaGGTTAAAGGGCAAGGCAGAGGTGACAGCTCTTCATCCAGGGAC +
Preference number: 1 (lower is better)
Translates to: VKQVLKRKPLCWEAG*VKGQGRGDSSSSRD
Trigger: GTCCCTGGATGAAGAGCTGTCACCTCTGCCTTGCCCTTTAACTCAACCCGCTTCCCAGCACAGCGGCTTTCTTTTTAAAACCTGTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 90 bp AGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTaGCGCTCCAGTGCAGATCGTTTTTCTTCTTCATGCTGTTGTTCT +
Preference number: 1 (lower is better)
Translates to: SLLRSCSNSCSYISL*RSSADRFSSSCCCS
Trigger: AGAACAACAGCATGAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp AGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTTATCAGCTGCAGGACTCACAGTAGC +
Preference number: 1 (lower is better)
Translates to: SVVYNVLGSICIPQS*EGFIIVISCRTHSS
Trigger: GCTACTGTGAGTCCTGCAGCTGATAACTATGATGAAACCCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CCA 90 bp AGTCTCCGTCTACATCCAGCTGCTCAGAACTATTCTCGTTCTTCATaGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: SLRLHPAAQNYSRSS*RDPGPHPLVLLSFS
Trigger: AGAAAAAGAAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp TGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTaGAGCTTAAATAACACCAGGAAATATCAGGCGATCTTATCCAAT +
Preference number: 1 (lower is better)
Translates to: WRTKDLDLGQAQTGI*SLNNTRKYQAILSN
Trigger: ATTGGATAAGATCGCCTGATATTTCCTGGTGTTATTTAAGCTTCAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp AAATGTTCTGGTGTTCTTCTGAGGAGTCAGCATAACCTGGCCTTCTaGCGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCC +
Preference number: 1 (lower is better)
Translates to: KCSGVLLRSQHNLAF*RDVYNTVFRKNSHA
Trigger: GGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGGCCAGGTTATGCTGACTCCTCAGAAGAACACCAGAACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR GCA 90 bp TACATAAGCCTCTGGCGCTCCAGTGCAGATCGTTTTTCTTCTTCATaGTGTTGTTCTAAGCTGTTTAATATGGACTGCATCGGATCATTG +
Preference number: 1 (lower is better)
Translates to: YISLWRSSADRFSSS*CCSKLFNMDCIGSL
Trigger: CAATGATCCGATGCAGTCCATATTAAACAGCTTAGAACAACAGCATGAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGGCTTATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 90 bp AACAAATTTATTCTTGTTTTTGCCAGCACTCTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGTTGTGAGGGACTTGTTAATGTTGCT +
Preference number: 1 (lower is better)
Translates to: NKFILVFASTLICKS*DNQTEGCEGLVNVA
Trigger: AGCAACATTAACAAGTCCCTCACAACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAATTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CCA 90 bp ATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACAGTTaGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTT +
Preference number: 1 (lower is better)
Translates to: MSIIQCSGRIPMPHS*ISWEFADPINVCSF
Trigger: AAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGACCAGGGTGGGAGGCTaGGGGGTCCCCCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVTRVGG*GVPQRH
Trigger: GTGCCTCTGGGGGACCCCCCAGCCTCCCACCCTGGT...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGGGGCTTGCCCTCCAGTaGGGAGGAAAGGCACTGGTT +
Preference number: 2 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLGLALQ*GGKALV
Trigger: AACCAGTGCCTTTCCTCCCCACTGGAGGGCAAGCCC...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGCCTGGGGGCGTGGCTaGTGTGAGGGTCTGGAGACT +
Preference number: 2 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGAWGRG*CEGLET
Trigger: AGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCATCAGGGCAGCAGCAGTaGTGGCCTCTCACCCAGGCC +
Preference number: 2 (lower is better)
Translates to: ACAVTALPGLGCHLRADPSGQQQ*WPLTQA
Trigger: GGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCCTGA...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTACCGCACCTCCTGCCTaGCAAGTGCTGGCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGTAPPA*QVLARG
Trigger: ACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGT...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGCTGCTGTGAGGGTCTaGAGACTAACCAGCACACTC +
Preference number: 2 (lower is better)
Translates to: AGPSASPAAAFVSLANWGAAVRV*RLTSTL
Trigger: GAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACTGAGGAGGCACAGTTaGGGCCCCCACTTTACCCGG +
Preference number: 2 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGLRRHS*GPHFTR
Trigger: CCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGGAGGCCAGCAGCTCTaGAATGGCCAGAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGGGQQL*NGQRGC
Trigger: GCAGCCTCTCTGGCCATTGCAGAGCTGCTGGCCTCC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGGTGTCCCTCGCCAACTaGGGAGAGAAAGACAACCTG +
Preference number: 2 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLVSLAN*GEKDNL
Trigger: CAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACAC...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 90 bp CCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTaGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTG +
Preference number: 2 (lower is better)
Translates to: PSLTAPRVQLLPFPA*GAICGPTHTKVPLL
Trigger: CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCACCCAGCCCCACACTCTaGGAGTCTGGGAGTTGCCGA +
Preference number: 2 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAPSPTL*ESGSCR
Trigger: TCGGCAACTCCCAGACTCTCAGAGTGTGGGGCTGGG...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCAGAGAGGCTGCAACGTaGAAGGCAGGCCCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTREAAT*KAGPGP
Trigger: GGGCCCAGGGCCTGCCTTGCACGTTGCAGCCTCTCT...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCCCTCAGGGCTGTCACTaGCAGGGCTCAAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PARPQPSCPSPTGERKTTPQGCH*QGSKGA
Trigger: GGCCCCTTTTGAGCCCTGCCAGTGACAGCCCTGAGG...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 90 bp TCCTGCCTGCCAAGTGCTGGCCCGGGGTCAGCGGGGCTCACTGCCTaGGTGACCACGTCACTGCACATCCCTCTTTCCCAGCCACAAGCT +
Preference number: 2 (lower is better)
Translates to: SCLPSAGPGSAGLTA*VTTSLHIPLSQPQA
Trigger: AGCTTGTGGCTGGGAAAGAGGGATGTGCAGTGACGTGGTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGCCCCAGCCAGGAGGTaGAGGCCACCCCGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSAPARR*RPPRKL
Trigger: AAGCTTCCGGGGTGGCCTCCACCTCCTGGCTGGGGC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGGGACAGGCCCACCATaGAGACTACTCTGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGGTGPP*RLLCWR
Trigger: GCGCCAACAGAGTAGTCTCCATGGTGGGCCTGTCCC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGATGGCTGTGTGAATCTTaGCCCAGGACTCCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGWLCES*PRTPVP
Trigger: AGGGACAGGAGTCCTGGGTCAAGATTCACACAGCCA...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGAGGGCAAGGCAGAGGTaGCAGCTCTTCATCCAGGGA +
Preference number: 2 (lower is better)
Translates to: FPALGAICGPTHTKVPLLRARQR*QLFIQG
Trigger: TCCCTGGATGAAGAGCTGTCACCTCTGCCTTGCCCT...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTTGGCACCAAAGGCTCTaGGAGCATAAGTGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLWHQRL*EHKCPS
Trigger: GCTGGGGCACTTATGCTCCCAGAGCCTTTGGTGCCA...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTTGCTGGGAAGCGGGTTaGGTTAAAGGGCAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLCWEAG*VKGQGR
Trigger: TCTGCCTTGCCCTTTAACTCAACCCGCTTCCCAGCA...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCAAGATCACCAGGCGCTaGACCACCCAGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTKITRR*TTQGLS
Trigger: ACTGAGACCCTGGGTGGTGCAGCGCCTGGTGATCTT...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGCTACAGGAGGCCGCTaGTGGGTGGATGGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SILGRKHRVTPVLCACAQATGGR*WVDGSA
Trigger: GGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACCCTCGGCCCCCGTCTaGGGCACCAGGACCATCTGC +
Preference number: 2 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERPSAPV*GTRTIC
Trigger: GCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAAGGGCCCGAGGGAAGTaGCGGGGTGGGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERRARGK*RGGARD
Trigger: ATCCCTGGCCCCACCCCGCCACTTCCCTCGGGCCCT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCACAGGCAGACGACGATTaGGGCTCGCAAATGATTTCG +
Preference number: 2 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAQADDD*GSQMIS
Trigger: CGAAATCATTTGCGAGCCGCAATCGTCGTCTGCCTG...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGCTCTGGGAGCATAAGTaGCCCAGCCAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQLWEHK*PSQEVE
Trigger: CTCCACCTCCTGGCTGGGGCACTTATGCTCCCAGAG...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCATGGAGACTACTCTGTTaGCGCCTTCAAGTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: ACAVTALPGLGCHLRADPWRLLC*RLQVPR
Trigger: TCTAGGGACTTGAAGGCGCCAACAGAGTAGTCTCCA...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCACCAGCCCTGTGTCGTaGAAAAAGCATTCATCGCCC +
Preference number: 2 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTTSPVS*KKHSSP
Trigger: GGGCGATGAATGCTTTTTGCACGACACAGGGCTGGT...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGGCACCAGGACCATCTaGCAGAGCCCAGGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: HIPLSQPQADISPHREARGTRTI*QSPGPS
Trigger: GGAGGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCAGAGTAAGGCCACTGTaGATCCGCAATAGAGGGATG +
Preference number: 2 (lower is better)
Translates to: PARPQPSCPSPTGERKTTRVRPL*IRNRGM
Trigger: CATCCCTCTATTGCGGATCCACAGTGGCCTTACTCT...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGCTGCCTGCCAAGTGCTaGCCCGGGGTCAGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGLPAKC*PGVSGA
Trigger: AGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAG...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGAGGCCAGCCCGCCCTaGCCCACCACTCTGGAGACC +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGEASPP*PTTLET
Trigger: GGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGCTAAGGTGCCACTCCTaGGGCCTTCCAGGAGCGCAT +
Preference number: 2 (lower is better)
Translates to: SILGRKHRVTPVLCACAQLRCHS*GLPGAH
Trigger: ATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAG...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 90 bp CCCCTGCGGGCACCCAGAACCTTCCATCCACCTGAGGAGGCACAGTaGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: PLRAPRTFHPPEEAQ*RPPLYPGTEETKLP
Trigger: TGGAAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTTCTGGGTGCCCGCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGAACCTTCCATCCACCTaGGGAGGCACAGTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: SILGRKHRVTPVLCACAQNLPST*GGTVEA
Trigger: GGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTT...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGCCGAGAAGTTAAAATaGCCCAAAGACCTTCCTAGA +
Preference number: 2 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGAEKLK*PKDLPR
Trigger: TCTAGGAAGGTCTTTGGGTCATTTTAACTTCTCGGC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAGCCTTGGGTGCCATCTaGGGGCCGACCCACACTAAG +
Preference number: 2 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERALGAI*GPTHTK
Trigger: CTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGC...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAGGGGAGGAAAGGCACTaGTTACAATTATGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: ACAVTALPGLGCHLRADPGEERH*LQLWFR
Trigger: CCTAAACCATAATTGTAACCAGTGCCTTTCCTCCCC...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGTCAAGTCAGGAACTCTaGCTCGTTCTACTCCACTGT +
Preference number: 2 (lower is better)
Translates to: FPALGAICGPTHTKVPLLSSQEL*LVLLHC
Trigger: ACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGA...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 90 bp CAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTaGTGTGCGTGCGCACAGCCACCAACACACACTCTCAGGACTTCC +
Preference number: 2 (lower is better)
Translates to: QWVSILGRKHRVTPV*CACAQPPTHTLRTS
Trigger: GGAAGTCCTGAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTGCCCGGGGCAGAAGTaGGCCTTCTCACCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGCPGQK*AFSPWS
Trigger: GCTCCAGGGTGAGAAGGCTCACTTCTGCCCCGGGCA...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGACAGGAGGCCGCTGCTaGGTGGATGGCTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGTGGRC*VDGSAT
Trigger: GGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGT...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGAAGCATTCATCGCCCTaGCCCTGGGGAAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGKHSSP*PWGRGH
Trigger: GTGGCCCCTTCCCCAGGGGCAGGGCGATGAATGCTT...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 90 bp AGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAAAGATGCTTaGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTG +
Preference number: 2 (lower is better)
Translates to: SPPGRHHGLCGEKDA*GVQWVSILGRKHRV
Trigger: CACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGCTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGT +
Preference number: 2 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPLICKS*DNQTEG
Trigger: ACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAG...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAGGGCCCAAATCCACCTaGTCAAGTCAGGAACTCTGG +
Preference number: 2 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERGPKST*SSQELW
Trigger: CCAGAGTTCCTGACTTGAGCAGGTGGATTTGGGCCC...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GCCTCTGCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCTCATTGCCTCTGCTTTaGTCAGCTGCTCCCGGAGTT +
Preference number: 2 (lower is better)
Translates to: ASALVSCSRSFSTSSRRSSLPLL*SAAPGV
Trigger: AACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGA...GGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CAA 90 bp CTTTGTGGAGAGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTaGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCA +
Preference number: 2 (lower is better)
Translates to: LCGEKDALGVQWVSI*GRKHRVTPVLCACA
Trigger: TGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp CCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGGTTCTGGTGTTCTTCTaGGGAGTCAGCATAACCTGG +
Preference number: 2 (lower is better)
Translates to: PSPELLQFVLIHKPLALQVLVFF*GVSITW
Trigger: CCAGGTTATGCTGACTCCTCAGAAGAACACCAGAAC...CTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR GCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATAATGGCCAGAGAGGCTaGAACGTGCAAGGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDNGQRG*NVQGRP
Trigger: GGGCCTGCCTTGCACGTTGCAGCCTCTCTGGCCATT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCACTTCAGCCTGTCCCCTaGAGCGCCTGTCTTCGTTGC +
Preference number: 2 (lower is better)
Translates to: ILPAGPLALEISLPLLWSLQPVP*SACLRC
Trigger: GCAACGAAGACAGGCGCTGCAGGGGACAGGCTGAAG...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp CCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 2 (lower is better)
Translates to: PSPELLQFVLIHKPLALQSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...CTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACTCCTGTCCCTAGATTaGTGGCCTTCCACACATAGA +
Preference number: 2 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERLLSLD*WPSTHR
Trigger: TCTATGTGTGGAAGGCCACCAATCTAGGGACAGGAG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGCTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 2 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCTTCAGCCTGTCCCCTaGAGCGCCTGTCTTCGTTGC +
Preference number: 2 (lower is better)
Translates to: NILSPWCSCIGLETDDPFLQPVP*SACLRC
Trigger: GCAACGAAGACAGGCGCTGCAGGGGACAGGCTGAAG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGCTGTCCCTAGATTGGTaGCCTTCCACACATAGACGC +
Preference number: 2 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGLSLDW*PSTHRR
Trigger: GCGTCTATGTGTGGAAGGCCACCAATCTAGGGACAG...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp GGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAGTTCTGCTTCTCAGGAGATATCATCCCCAACTTTaGTTCCCGAAGACTGAAGAG +
Preference number: 2 (lower is better)
Translates to: GRVERKPVHAPAVLLLRRYHPQL*FPKTEE
Trigger: CTCTTCAGTCTTCGGGAATCAAAGTTGGGGATGATA...TCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 2 (lower is better)
Translates to: PAGPLALEISLPLLWSAAGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTGGTTTACAATGTGCTTaGCTCGATCTGCATACCGCA +
Preference number: 2 (lower is better)
Translates to: PAGPLALEISLPLLWSAAGLQCA*LDLHTA
Trigger: TGCGGTATGCAGATCGAGCCAAGCACATTGTAAACC...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCCTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 2 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTCAGGTTGGTCAGCTGTaGCCATCATGGTATAAGATT +
Preference number: 2 (lower is better)
Translates to: PAGPLALEISLPLLWSAAQVGQL*PSWYKI
Trigger: AATCTTATACCATGATGGGCACAGCTGACCAACCTG...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR CCA 90 bp ACAGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTGAGAGGTCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 2 (lower is better)
Translates to: TAWFTMCLARSAYRRVERSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...CCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR TCA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 2 (lower is better)
Translates to: RSCSNSCSYISLWRSSADILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR TCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATCCCCACCCCCATCTCTaGCAGCGCCGCGTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNPHPHL*QRRVCS
Trigger: ACTGCACACGCGGCGCTGTCAGAGATGGGGGTGGGG...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTTCTCTCCAAGGCACTTaGAAACAATATCTTGACCTG +
Preference number: 2 (lower is better)
Translates to: PAGPLALEISLPLLWSAASLQGT*KQYLDL
Trigger: CAGGTCAAGATATTGTTTTCAAGTGCCTTGGAGAGA...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR GCA 90 bp GGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAGTTCTGCTTCTCAGGAGAGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 2 (lower is better)
Translates to: GRVERKPVHAPAVLLLRRVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...TCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CCA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATCTAAGCTGTTTAATATaGACTGCATCGGATCATTGC +
Preference number: 2 (lower is better)
Translates to: RSCSNSCSYISLWRSSADLSCLI*TASDHC
Trigger: GCAATGATCCGATGCAGTCCATATTAAACAGCTTAG...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR TCA 90 bp TTCGTAATTAAAGTTAACTTCACTGGACACCTCGCTGGAGGAGTCTCCGTCTACCTGACTTTCAACGTCTaGCGGCTTCCTTTGGGATCA +
Preference number: 2 (lower is better)
Translates to: FVIKVNFTGHLAGGVSVYLTFNV*RLPLGS
Trigger: TGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAG...GTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTGAAGTTAACTTTAATTACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR TCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCTGACTTTCAACGTCTaGCGGCTTCCTTTGGGATCA +
Preference number: 2 (lower is better)
Translates to: NILSPWCSCIGLETDDPFLTFNV*RLPLGS
Trigger: TGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCAGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 2 (lower is better)
Translates to: HNILSPWCSCIGLETDDPAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTTCTGCTTTGGTCAGCTaGTCCCGGAGTTTCTCAACT +
Preference number: 2 (lower is better)
Translates to: NILSPWCSCIGLETDDPFSALVS*SRSFST
Trigger: AGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGA...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: NILSPWCSCIGLETDDPFRFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CAA 90 bp CTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTaGCTCTCATCCAAGTTAAGAGTAAGGCCACTGTGGATCCGCAAT +
Preference number: 2 (lower is better)
Translates to: LPLSPTTEAHHSPRF*LSSKLRVRPLWIRN
Trigger: ATTGCGGATCCACAGTGGCCTTACTCTTAACTTGGATGAGAGCAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 2 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 2 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CCTTCTGACGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 2 (lower is better)
Translates to: PSDVMSIIQCSGRIPMPHAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...GTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATTCAGCCACCACGAAGTaGCAGGTCCCACCCACGCTG +
Preference number: 2 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNSATTK*QVPPTL
Trigger: CAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGA...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTATTTTGAAAACTGCATaGGATCGGCTACTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTILKTA*DRLLSS
Trigger: CGAGGAGAGTAGCCGATCCCATGCAGTTTTCAAAAT...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAATTTTGAAAACTGCATaGGATCGGCTACTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQILKTA*DRLLSS
Trigger: CGAGGAGAGTAGCCGATCCCATGCAGTTTTCAAAAT...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGCAGCTGTGCCCATCATaGTATAAGATTTTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SFPGLASQILPAGPLALEQLCPS*YKIFQS
Trigger: GCTCTGGAAAATCTTATACCATGATGGGCACAGCTG...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR TCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTT +
Preference number: 2 (lower is better)
Translates to: NILSPWCSCIGLETDDPFCIPQS*EGFIIV
Trigger: AACTATGATGAAACCCTCTCAACTCTGCGGTATGCA...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATTGGTTGCAGCAACTGTaGGAGATTTGTTACCCTCAG +
Preference number: 2 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHWLQQL*EICYPQ
Trigger: CTGAGGGTAACAAATCTCGCACAGTTGCTGCAACCA...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCATCATAGTTATCAGCTaGAGGACTCACAGTAGCCAC +
Preference number: 2 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAIIVIS*RTHSSH
Trigger: GTGGCTACTGTGAGTCCTGCAGCTGATAACTATGAT...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CCTTCTGACGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACTTTCTGTCGTTCCTGTaGAATCTCCTCCGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: PSDVMSIIQCSGRIPMPHFLSFL*NLLRFP
Trigger: AGGAAAACGGAGGAGATTGCACAGGAACGACAGAAA...GTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTCATTCACCACAGCGTaGTTTACAATGTGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDSFTTA*FTMCLA
Trigger: AGCCAAGCACATTGTAAACCACGCTGTGGTGAATGA...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CAA 90 bp CATTTTCCTCTTTCTGAGTTCGTTCAAAGAGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGTCAGCTGTGCCCATCATGGTATAAG +
Preference number: 2 (lower is better)
Translates to: HFPLSEFVQRVHCKV*GLIQVGQLCPSWYK
Trigger: CTTATACCATGATGGGCACAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTGGACTCTTTGAACGAACTCAGAAAGAGGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR TCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATCCAAGGGTGGCTGTGTaGATCTTGACCCAGGACTCC +
Preference number: 2 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNPRVAV*ILTQDS
Trigger: GGAGTCCTGGGTCAAGATTCACACAGCCACCCTTGG...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR GCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 2 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp AATGATTGTTTCCCCATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 2 (lower is better)
Translates to: NDCFPIISCPHGVAVLDWGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...CCAGTCCAATACAGCTACACCATGGGGACAGGATATTATGGGGAAACAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp TTAATTTCTCCTCCCAGGTCACAGTCATTTCCTGGATTAGCTTCTCAGATTCTTAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 2 (lower is better)
Translates to: LISPPRSQSFPGLASQILRFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...AAGAATCTGAGAAGCTAATCCAGGAAATGACTGTGACCTGGGAGGAGAAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp AATGATTGTTTCCCCATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGCTGTTTAATATGGACTaGATCGGATCATTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: NDCFPIISCPHGVAVLDWLFNMD*IGSLLP
Trigger: GGGCAGCAATGATCCGATGCAGTCCATATTAAACAG...CCAGTCCAATACAGCTACACCATGGGGACAGGATATTATGGGGAAACAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CCA 90 bp AATGATTGTTTCCCCATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAAGCTCATTCAGAGCTaGGTCAGCATTCAGATTCAC +
Preference number: 2 (lower is better)
Translates to: NDCFPIISCPHGVAVLDWKLIQS*VSIQIH
Trigger: GTGAATCTGAATGCTGACCCAGCTCTGAATGAGCTT...CCAGTCCAATACAGCTACACCATGGGGACAGGATATTATGGGGAAACAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CAA 90 bp CTAGAAACCAAAAGTGCACCAAATAAAGTAGCAATGCCTCTTCCTTaGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: LETKSAPNKVAMPLP*SPTTEAHHSPRFLL
Trigger: GAGCAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCATTGCTACTTTATTTGGTGCACTTTTGGTTTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR TCA 90 bp CCTTCTGACGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 2 (lower is better)
Translates to: PSDVMSIIQCSGRIPMPHILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...GTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTACAGGAAGAATTCCCATaGCGCACAGTTGGATATCTT +
Preference number: 2 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLQEEFP*RTVGYL
Trigger: AAGATATCCAACTGTGCGGCATGGGAATTCTTCCTG...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR GCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCATTTATTCTTGTTTTTaGCAGCACTCTGATCTGCAA +
Preference number: 2 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAIYSCF*QHSDLQ
Trigger: TTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAAT...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATGCACCACGGACTTTGTaGAGAGAAAGATGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNAPRTL*RERCFG
Trigger: CCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGC...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTaGCTGCCAAGTGCTGGCCCGGGGTCAGCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: PALAHHSGDRTS*LPSAGPGSAGL
Trigger: GAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp GGCCGCTGCTGGGTGGATGGCTCAGCCACCACGAAGTaGCAGGTCCCACCCACGCTGCCCGTCCGCCACCAT +
Preference number: 3 (lower is better)
Translates to: GRCWVDGSATTK*QVPPTLPVRHH
Trigger: ATGGTGGCGGACGGGCAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCACCACTCTGGAGACCGCACCTCCTGCCTGCCAAGTaGTGGCCCGGGGTCAGCGGGGCTCACTGCCTTGGT +
Preference number: 3 (lower is better)
Translates to: PPLWRPHLLPAK*WPGVSGAHCLG
Trigger: ACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CCACTCTGGAGACCGCACCTCCTGCCTGCCAAGTGCTaGCCCGGGGTCAGCGGGGCTCACTGCCTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: PLWRPHLLPAKC*PGVSGAHCLGD
Trigger: GTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCCAGAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGCTaGTGTGAGGGTCTGGAGACTAACCAGCACACTCCC +
Preference number: 3 (lower is better)
Translates to: RPHHARWAWGRG*CEGLETNQHTP
Trigger: GGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGCCCACCGTGCATGGTGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTaGCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAG +
Preference number: 3 (lower is better)
Translates to: PWVPSAGRPTLR*HSWGLPGAHRE
Trigger: CTCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp GTCAGGCCTGGGTACCCAGGAACCCAGTCACACACCTaGCCCCTGTCCCCTCTGCTGCTGGACGCAGTGCCC +
Preference number: 3 (lower is better)
Translates to: VRPGYPGTQSHT*PLSPLLLDAVP
Trigger: GGGCACTGCGTCCAGCAGCAGAGGGGACAGGGGGCAGGTGTGTGACTGGGTTCCTGGGTACCCAGGCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CACGGTGGGCCTGGGGGCGTGGCTGCTGTGAGGGTCTaGAGACTAACCAGCACACTCCCTGCACCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: HGGPGGVAAVRV*RLTSTLPAPAQ
Trigger: CTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGCCCACCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp GCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTaGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: ASPAAAFVSLAN*GEKDNLSSQPG
Trigger: CCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTaGGTGCCATCTGCGGGCCGACCCACACTAAGGTGC +
Preference number: 3 (lower is better)
Translates to: QRRVCSYCPSRP*VPSAGRPTLRC
Trigger: GCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 72 bp CCAGCCCCTGCGGGCACCCAGAACCTTCCATCCACCTaGGGAGGCACAGTTGAGGCCCCCACTTTACCCGGG +
Preference number: 3 (lower is better)
Translates to: PAPAGTQNLPST*GGTVEAPTLPG
Trigger: CCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTTCTGGGTGCCCGCAGGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp ACACGGCCCAGGCGTTTCCCCTCAGGGCAGCAGCAGTaGTGGCCTCTCACCCAGGCCATAGTGACACCAGCG +
Preference number: 3 (lower is better)
Translates to: TRPRRFPSGQQQ*WPLTQAIVTPA
Trigger: CGCTGGTGTCACTATGGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCCTGAGGGGAAACGCCTGGGCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp GTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTaGGGGCCGACCCACACTAAGGTGCCACTCCTGGGG +
Preference number: 3 (lower is better)
Translates to: VQLLPFPALGAI*GPTHTKVPLLG
Trigger: CCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCTGCCAAGTGCTGGCCCGGGGTCAGCGGGGCTCACTaGCTTGGTGACCACGTCACTGCACATCCCTCTTTC +
Preference number: 3 (lower is better)
Translates to: PAKCWPGVSGAH*LGDHVTAHPSF
Trigger: GAAAGAGGGATGTGCAGTGACGTGGTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATaGCTCAGCCACCACGAAGTGCCAGGTCCCACCCAC +
Preference number: 3 (lower is better)
Translates to: PRWCYRRPLLGG*LSHHEVPGPTH
Trigger: GTGGGTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGTCCCCCAGAGGCACTTaGCGGGAAACTGGGACCAGG +
Preference number: 3 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPSPRGT*RETGTR
Trigger: CCTGGTCCCAGTTTCCCGCAAAGTGCCTCTGGGGGA...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCACAAACCTGGCACCAAAGGCTCTGGGAGCATAAGTaGCCCAGCCAGGAGGTGGAGGCCACCCCGGAAGCT +
Preference number: 3 (lower is better)
Translates to: PQTWHQRLWEHK*PSQEVEATPEA
Trigger: AGCTTCCGGGGTGGCCTCCACCTCCTGGCTGGGGCACTTATGCTCCCAGAGCCTTTGGTGCCAGGTTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CTGGAGCCTCAGTCCTTCATAAGGGCCCGAGGGAAGTaGCGGGGTGGGGCCAGGGATGTTCTGGGCACACAA +
Preference number: 3 (lower is better)
Translates to: LEPQSFIRARGK*RGGARDVLGTQ
Trigger: TTGTGTGCCCAGAACATCCCTGGCCCCACCCCGCCACTTCCCTCGGGCCCTTATGAAGGACTGAGGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGCCTGAGGAGGCACAGTaGAGGCCCCCACTTTACCCG +
Preference number: 3 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQPEEAQ*RPPLYP
Trigger: CGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGG...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAACAGGCAGACGACGATaGCGGCTCGCAAATGATTTC +
Preference number: 3 (lower is better)
Translates to: ACAVTALPGLGCHLRADPTGRRR*RLANDF
Trigger: GAAATCATTTGCGAGCCGCAATCGTCGTCTGCCTGT...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CCAGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTaGTGGGTGGATGGCTCAGCCACCACGAAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: PGLSQDGATGGR*WVDGSATTKCQ
Trigger: CTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp TTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTaGATGGCTCAGCCACCACGAAGTGCCAGGTCCCAC +
Preference number: 3 (lower is better)
Translates to: FPKMVLQEAAAG*MAQPPRSARSH
Trigger: GTGGGACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp GGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTaGGTGGATGGCTCAGCCACCACGAAGTGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: GLSQDGATGGRC*VDGSATTKCQV
Trigger: GACCTGGCACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp GGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTaGGCACAGCCACCAACACACACTCTCAGGACTTCC +
Preference number: 3 (lower is better)
Translates to: GRKHRVTPVLCA*AQPPTHTLRTS
Trigger: GGAAGTCCTGAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR GCA 72 bp CTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTaGGTGCGCACAGCCACCAACACACACTCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: LGQEAQGDSRLV*VRTATNTHSQD
Trigger: GTCCTGAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp AGGGCTGGGACAGGCCCACCATGGAGACTACTCTGTTaGCGCCTTCAAGTCCCTAGAGAACCAGAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: RAGTGPPWRLLC*RLQVPREPEPS
Trigger: GGAAGGCTCTGGTTCTCTAGGGACTTGAAGGCGCCAACAGAGTAGTCTCCATGGTGGGCCTGTCCCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGGCAATGCCTCTTCCTTaGTCACCGACTACAGAAGCA +
Preference number: 3 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPAMPLP*SPTTEA
Trigger: TGCTTCTGTAGTCGGTGACAAAGGAAGAGGCATTGC...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GCCTCTGCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCCCCCCGAGGCTGTCTTaGAGCAGCCAAGTGAGAACT +
Preference number: 3 (lower is better)
Translates to: ASALVSCSRSFSTSSRRSPPRLS*SSQVRT
Trigger: AGTTCTCACTTGGCTGCTCAAAGACAGCCTCGGGGG...GGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGAGGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR GCA 72 bp GCTGAGCGCTGGGCGAGTGGAAAGAAAACCTGTCCATaGTCCGGCAGTTCTGCTTCTCAGGAGACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: AERWASGKKTCP*SGSSASQETAF
Trigger: GAAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 72 bp TCTCCTCAGCCCACTGTCTTAAGCGTTGCTGAGCGCTaGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGC +
Preference number: 3 (lower is better)
Translates to: SPQPTVLSVAER*ASGKKTCPCSG
Trigger: GCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACAGTGGGCTGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 72 bp TTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTaGCTCCCGTCTTGTGTGCGTGCGCACAGCCACCAA +
Preference number: 3 (lower is better)
Translates to: FNGSVSWAGSTG*LPSCVRAHSHQ
Trigger: TTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GGAACGGCAACCTCACCTTCCTGTTGGCATCCAGGCTGGAGGCTGGAATCTGTACTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGA +
Preference number: 3 (lower is better)
Translates to: GTATSPSCWHPGWRLESVLSSFM*VAATVR
Trigger: TCGCACAGTTGCTGCAACCAACATGAACGAGGAGAG...TACAGATTCCAGCCTCCAGCCTGGATGCCAACAGGAAGGTGAGGTTGCCGTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR TCA 72 bp GCTTCTCTCTCCTCAGCCCACTGTCTTAAGCGTTGCTaGGCGCTGGGCGAGTGGAAAGAAAACCTGTCCATG +
Preference number: 3 (lower is better)
Translates to: ASLSSAHCLKRC*ALGEWKENLSM
Trigger: CATGGACAGGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACAGTGGGCTGAGGAGAGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 72 bp TCAGGAGACAGCCTTCTCCGGAGCTGCTCCAATTCGTaGTCATACATAAGCCTCTGGCGCTCCAGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: SGDSLLRSCSNS*SYISLWRSSAD
Trigger: ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCTCCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 72 bp CAGTTCTGCTTCTCAGGAGACAGCCTTCTCCGGAGCTaGTCCAATTCGTGCTCATACATAAGCCTCTGGCGC +
Preference number: 3 (lower is better)
Translates to: QFCFSGDSLLRS*SNSCSYISLWR
Trigger: GCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCTCCTGAGAAGCAGAACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 72 bp ATTAGTCCGCACCGAGAAGCAAGAGTGAACAGGGCCTaGGCCCAAATCCACCTGCTCAAGTCAGGAACTCTG +
Preference number: 3 (lower is better)
Translates to: ISPHREARVNRA*AQIHLLKSGTL
Trigger: CAGAGTTCCTGACTTGAGCAGGTGGATTTGGGCCCAGGCCCTGTTCACTCTTGCTTCTCGGTGCGGACTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp TGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTaGAGAGAAAGATGCTTTGGGGGTTCAATGGGTCAG +
Preference number: 3 (lower is better)
Translates to: CLQPTRKAPRTL*RERCFGGSMGQ
Trigger: CTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATTCCACCAGGCTGAGTTaGCCCACTTTCTCTCCAGAT +
Preference number: 3 (lower is better)
Translates to: RSCSNSCSYISLWRSSADSTRLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAACTCAGCCTGGTGGA...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 72 bp GACACCTCGCTGGAGGAGTCTCCGTCTACATCCAGCTaGTCAGAACTATTCTCGTTCTTCATGGAGGGATCC +
Preference number: 3 (lower is better)
Translates to: DTSLEESPSTSS*SELFSFFMEGS
Trigger: GGATCCCTCCATGAAGAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGGAGACTCCTCCAGCGAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 72 bp CCTGGGCCCAAATCCACCTGCTCAAGTCAGGAACTCTaGCTCGTTCTACTCCACTGTAAGTCAAACCGATGG +
Preference number: 3 (lower is better)
Translates to: PGPKSTCSSQEL*LVLLHCKSNRW
Trigger: CCATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGGTGGATTTGGGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: RSCSNSCSYISLWRSSADRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CAA 90 bp ACAGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTGAGAGGTTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 3 (lower is better)
Translates to: TAWFTMCLARSAYRRVERFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...CCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CAA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATGCTCTGGAGATTTCATaGCCTCTGCTTTGGTCAGCT +
Preference number: 3 (lower is better)
Translates to: RSCSNSCSYISLWRSSADALEIS*PLLWSA
Trigger: AGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGC...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CAA 90 bp AGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGTCCCATGCCGCACAGTaGGATATCTTGGGAATTTGC +
Preference number: 3 (lower is better)
Translates to: RQPSPELLQFVLIHKPLASHAAQ*DILGIC
Trigger: GCAAATTCCCAAGATATCCAACTGTGCGGCATGGGA...CGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR GCA 72 bp ACCAGGAAGGCACCACGGACTTTGTGGAGAGAAAGATaGTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: TRKAPRTLWRER*FGGSMGQYLGQ
Trigger: CTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGCCTTCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGTTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 3 (lower is better)
Translates to: SFPGLASQILPAGPLALEFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CCA 72 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTaGCGCTCCAGTGCAGATCGTTTTTCTTCTTCATGC +
Preference number: 3 (lower is better)
Translates to: RSCSNSCSYISL*RSSADRFSSSC
Trigger: GCATGAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CCA 72 bp GGACTTTGTGGAGAGAAAGATGCTTTGGGGGTTCAATaGGTCAGTATCTTGGGCAGGAAGCACAGGGTGACT +
Preference number: 3 (lower is better)
Translates to: GLCGEKDALGVQ*VSILGRKHRVT
Trigger: AGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 72 bp GTCCGTCGACATAAGGTCCCAACACACTATGCTCTCTaGCTTTCAACGTCTGACGGCTTCCTTTGGGATCAA +
Preference number: 3 (lower is better)
Translates to: VRRHKVPTHYAL*LSTSDGFLWDQ
Trigger: TTGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACCTTATGTCGACGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR TCA 72 bp GTTTTAAAAAGAAAGCCGCTGTGCTGGGAAGCGGGTTaGGTTAAAGGGCAAGGCAGAGGTGACAGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: VLKRKPLCWEAG*VKGQGRGDSSS
Trigger: TGAAGAGCTGTCACCTCTGCCTTGCCCTTTAACTCAACCCGCTTCCCAGCACAGCGGCTTTCTTTTTAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CCA 72 bp CTACATCCAGCTGCTCAGAACTATTCTCGTTCTTCATaGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: LHPAAQNYSRSS*RDPGPHPLVLL
Trigger: AAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCTGAGCAGCTGGATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CAA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CAA 90 bp AGAACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCCTGCATACCGCAGAGTaGAGAGGGTTTCATCATAGT +
Preference number: 3 (lower is better)
Translates to: RTILVLHGGILVLILSFCLHTAE*RGFHHS
Trigger: ACTATGATGAAACCCTCTCAACTCTGCGGTATGCAG...GCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CAA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGACATTCTCCCAGGTTTTaGCTCTCATCCAAGTTAAGA +
Preference number: 3 (lower is better)
Translates to: HIPLSQPQADISPHREARHSPRF*LSSKLR
Trigger: TCTTAACTTGGATGAGAGCAAAAACCTGGGAGAATG...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR TCA 72 bp AAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTaGAGCTTAAATAACACCAGGAAATATCAGGCGATC +
Preference number: 3 (lower is better)
Translates to: KDLDLGQAQTGI*SLNNTRKYQAI
Trigger: GATCGCCTGATATTTCCTGGTGTTATTTAAGCTTCAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
3UTR TCA 72 bp AGAGAACCAGAGCCTTCCGCAGCGCTTTCTAGATGTTaGCTAAATGTGAGAACTAGAAACCAGCTCCAAGGG +
Preference number: 3 (lower is better)
Translates to: REPEPSAALSRC*LNVRTRNQLQG
Trigger: CCCTTGGAGCTGGTTTCTAGTTCTCACATTTAGTCAACATCTAGAAAGCGCTGCGGAAGGCTCTGGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTGCAACTGTGCGAGATTaGTTACCCTCAGACATCAAC +
Preference number: 3 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTATVRD*LPSDIN
Trigger: GTTGATGTCTGAGGGTAACAAATCTCGCACAGTTGC...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CAA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCCCTGCATACTTTTCTTaGACAGATTCATCCATAGAC +
Preference number: 3 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVPAYFS*TDSSID
Trigger: GTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGG...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR CAA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 3 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR TCA 72 bp ATTCTTGTTTTTGCCAGCACTCTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGTTGTGAGGGACTTGTT +
Preference number: 3 (lower is better)
Translates to: ILVFASTLICKS*DNQTEGCEGLV
Trigger: AACAAGTCCCTCACAACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAGAGTGCTGGCAAAAACAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR TCA 72 bp TACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTTATCAGCTGCAGGACT +
Preference number: 3 (lower is better)
Translates to: YNVLGSICIPQS*EGFIIVISCRT
Trigger: AGTCCTGCAGCTGATAACTATGATGAAACCCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR TCA 72 bp CACTCTGAGAGTCTGGGAGTTGCCGAGAAGTTAAAATaGCCCAAAGACCTTCCTAGAAACCAAAAGTGCACC +
Preference number: 3 (lower is better)
Translates to: HSESLGVAEKLK*PKDLPRNQKCT
Trigger: GGTGCACTTTTGGTTTCTAGGAAGGTCTTTGGGTCATTTTAACTTCTCGGCAACTCCCAGACTCTCAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR-3UTR CAA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAGGATTAAGAATAACCTaGTTTGCATCCACATCCACC +
Preference number: 3 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQGLRIT*FASTST
Trigger: GGTGGATGTGGATGCAAACAAGGTTATTCTTAATCC...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR-3UTR CAA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGT +
Preference number: 3 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHVHCKV*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGACTTTGCAGTGGAC...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR GCA 72 bp CATTTTCCTCTTTCTGAGTTCGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATCCAGGTTGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: HFPLSEFVQRVH*KVLGLIQVGQL
Trigger: CAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTGGACTCTTTGAACGAACTCAGAAAGAGGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR CCA 72 bp TTTCTTCTTCATGCTGTTGTTCTAAGCTGTTTAATATaGACTGCATCGGATCATTGCTGCCCAGGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: FLLHAVVLSCLI*TASDHCCPGPS
Trigger: TGAAGGCCCTGGGCAGCAATGATCCGATGCAGTCCATATTAAACAGCTTAGAACAACAGCATGAAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR-3UTR CAA 90 bp TTAATTTCTCCTCCCAGGTCACAGTCATTTCCTGGATTAGCTTCTCAGATTCTTTGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 3 (lower is better)
Translates to: LISPPRSQSFPGLASQILCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...AAGAATCTGAGAAGCTAATCCAGGAAATGACTGTGACCTGGGAGGAGAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR-3UTR CAA 90 bp GCCATCAAAAGCATTCTGCAGGATATTCTCTCCAAGGCACTTGAAAACAATATCCCCCGGGCATCTCCTTaGGAAAGATTCGTATTTACA +
Preference number: 3 (lower is better)
Translates to: AIKSILQDILSKALENNIPRASP*ERFVFT
Trigger: TGTAAATACGAATCTTTCCAAAGGAGATGCCCGGGG...GATATTGTTTTCAAGTGCCTTGGAGAGAATATCCTGCAGAATGCTTTTGATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523968.1
3UTR CCA 72 bp TCAGGAAGAATTCCCATGCCGCACAGTTGGATATCTTaGGAATTTGCTGACCCTATCAATGTATGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SGRIPMPHSWIS*EFADPINVCSF
Trigger: AAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCGGCATGGGAATTCTTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
3UTR CCA 72 bp ATACAGTGTTCAGGAAGAATTCCCATGCCGCACAGTTaGATATCTTGGGAATTTGCTGACCCTATCAATGTA +
Preference number: 3 (lower is better)
Translates to: IQCSGRIPMPHS*ISWEFADPINV
Trigger: TACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCGGCATGGGAATTCTTCCTGAACACTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCCAGCCGGAGTCCTGTaGTGCGCCGCCGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPPAGVL*CAAAQG
Trigger: GCCCTGTGCGGCGGCGCAGCACAGGACTCCGGCTGG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCGAGGCCAGCCCGCCCTaGCCCACCACTCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPEASPP*PTTLET
Trigger: GGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTC...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGGGGCCCATCTCCGGCTaGGCCTCCTCCATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLGPISG*ASSILV
Trigger: GACCAGGATGGAGGAGGCTCAGCCGGAGATGGGCCC...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCTCCGGGCTGGCTGACTaGACCATGATGCGGGGCACG +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPSGLAD*TMMRGT
Trigger: CGTGCCCCGCATCATGGTGCAGTCAGCCAGCCCGGA...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGACCATCCTGGTCACCCTaGTGTCCGGGCTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGPSWSP*CPGWLT
Trigger: AGTCAGCCAGCCCGGACATCAGGGTGACCAGGATGG...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGACCGCTGCTGGGTGGATaGCTCAGCCACCACGAAGTG +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGPLLGG*LSHHEV
Trigger: CACTTCGTGGTGGCTGAGCCATCCACCCAGCAGCGG...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGAAGCATTCATCGCCCTaGCCCTGGGGAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVKHSSP*PWGRGH
Trigger: GTGGCCCCTTCCCCAGGGGCAGGGCGATGAATGCTT...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCCGACAGGGTCGCGGTaGAGACGCTGTGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVPTGSR*RRCGRS
Trigger: ACTTCTCCCACAGCGTCTCCACCGCGACCCTGTCGG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCTCACGAGCTGCTaGGGGCCAGGGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLGLTSC*GPGGSS
Trigger: CGAGGAGCCCCCTGGCCCCCAGCAGCTCGTGAGCCC...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCTAAGGTGCCACTCCTaGGGCCTTCCAGGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPLRCHS*GLPGAH
Trigger: ATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGTGCCCCTGCTGAGCTaGGGGCAGCCATGCACCGCG +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGVPLLS*GQPCTA
Trigger: CGCGGTGCATGGCTGCCCTCAGCTCAGCAGGGGCAC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCAGGGCAAGGCAGAGGTaGCAGCTCTTCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPRARQR*QLFIQG
Trigger: TCCCTGGATGAAGAGCTGTCACCTCTGCCTTGCCCT...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACCCCACCCCCATCTCTaGCAGCGCCGCGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGPHPHL*QRRVCS
Trigger: ACTGCACACGCGGCGCTGTCAGAGATGGGGGTGGGG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCTCTGGGAGCATAAGTaGCCCAGCCAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLLWEHK*PSQEVE
Trigger: CTCCACCTCCTGGCTGGGGCACTTATGCTCCCAGAG...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCGACCCACACTAAGGTaGCACTCCTGGGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVRPTLR*HSWGLP
Trigger: TGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGAGGCAGCGGCTCAGCTaGCCCAGGATTTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLRQRLS*PRISGS
Trigger: AGAACCGGAAATCCTGGGCCAGCTGAGCCGCTGCCT...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCATGCGGGGCACGGGCTaGTGTGCGAGGGGAGACGGC +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTMRGTG*CARGDG
Trigger: GCCGTCTCCCCTCGCACACCAGCCCGTGCCCCGCAT...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGCCCCAGCCAGGAGGTaGAGGCCACCCCGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGAPARR*RPPRKL
Trigger: AAGCTTCCGGGGTGGCCTCCACCTCCTGGCTGGGGC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGATGGCACCAAAGGCTCTaGGAGCATAAGTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGWHQRL*EHKCPS
Trigger: GCTGGGGCACTTATGCTCCCAGAGCCTTTGGTGCCA...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGATGTCCCCTCTGCTGCTaGACGCAGTGCCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGCPLCC*TQCPGQ
Trigger: CTGCCCCGGGCACTGCGTCCAGCAGCAGAGGGGACA...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGACCGAGAAGCAAGAGTaGACAGGGCCTGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVTEKQE*TGPGPK
Trigger: TTTGGGCCCAGGCCCTGTTCACTCTTGCTTCTCGGT...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCACGTGCAGCCGACCTaGCACCTCTCCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLHVQPT*HLSFLV
Trigger: AACCAGAAAGGAGAGGTGGCAGGTCGGCTGCACGTG...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGGCACCAGGACCATCTaGCAGAGCCCAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGGTRTI*QSPGPS
Trigger: GGAGGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCATCAGCGAGGCCAGGTTaGTGGCGGAGCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRASARPG*WRSPRG
Trigger: CCCTCTCGGGCTCCGCCACCAACCTGGCCTCGCTGA...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCCATGCACGGTGGGCCTaGGGGCGTGGCTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTHARWA*GRGCCE
Trigger: CTCACAGCAGCCACGCCCCCAGGCCCACCGTGCATG...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGCCACACCATGCACGGTaGGCCTGGGGGCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPPHHAR*AWGRGC
Trigger: GCAGCCACGCCCCCAGGCCCACCGTGCATGGTGTGG...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTTGTCAGCAGGGTGGCTaGGCTGGACCGTCACGCGCA +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGCQQGG*AGPSRA
Trigger: TGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACA...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAGGGGGCTTTATCCTCTaGCGTCCCCAGGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACAVTALPGLGCHLRADPGGFIL*RPQDPP
Trigger: TGGAGGGTCCTGGGGACGGCAGAGGATAAAGCCCCC...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCCTTCCCGGCCTTGGGTaGCATCTGCGGGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTLPGLG*HLRADP
Trigger: TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAG...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCACTGGACACCTCGCTaGAGGAGTCTCCGTCTACAT +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVHWTPR*RSLRLH
Trigger: ATGTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGCTTCACTCAGGGGGCTaGGGGGCCCGTCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPLHSGG*GARPVP
Trigger: AGGCACAGGACGGGCCCCCCAGCCCCCTGAGTGAAG...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAACTGCTTCCCGCCGATaGAACCGTCATTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGTASRR*NRHSYL
Trigger: CAGGTAAGAATGACGGTTCCATCGGCGGGAAGCAGT...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGCGGGCAGGCGTTCTTaGGAGGTGAGTCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGAGRRS*EVSLLV
Trigger: GACCAGCAGACTCACCTCCCAAGAACGCCTGCCCGC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGAAACCCTGGCGGCCGTaGACATTGACACAGATTCTC +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVKPWRP*TLTQIL
Trigger: GAGAATCTGTGTCAATGTTCACGGCCGCCAGGGTTT...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGGATGTCCGGGCTGGCTaGCTGCACCATGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPDVRAG*LHHDAG
Trigger: CCCCGCATCATGGTGCAGTCAGCCAGCCCGGACATC...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACTTCAGCCTGTCCCCTaGAGCGCCTGTCTTCGTTGC +
Preference number: 4 (lower is better)
Translates to: ACAVTALPGLGCHLRADPLQPVP*SACLRC
Trigger: GCAACGAAGACAGGCGCTGCAGGGGACAGGCTGAAG...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGTTACACCTGAAGTACTaGTTCCCGCCGATGGAACCG +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLLHLKY*FPPMEP
Trigger: CGGTTCCATCGGCGGGAAGCAGTACTTCAGGTGTAA...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCGGAGGCCAGCAGCTCTaGAATGGCCAGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTGGQQL*NGQRGC
Trigger: GCAGCCTCTCTGGCCATTGCAGAGCTGCTGGCCTCC...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGCCCCCTGTCCCCTCTaGTGCTGGACGCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQAPCPL*CWTQCP
Trigger: CGGGCACTGCGTCCAGCAGCAGAGGGGACAGGGGGC...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCTTCATGGAGGGATCCTaGTCCTCATCCTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPFMEGS*SSSSRS
Trigger: AGAACGAGAGGATGAGGACCAGGATCCCTCCATGAA...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTACCACGCCCGTTTTGTaGGCGCCCACGGTGACGAAC +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLTTPVL*APTVTN
Trigger: GTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGT...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAAGCCTCGCTTCCTGTTaGCATCCAGGCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ACAVTALPGLGCHLRADPSLASC*HPGWRL
Trigger: CAGCCTCCAGCCTGGATGCCAACAGGAAGCGAGGCT...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGCCTCAGGGCTGTCACTaGCAGGGCTCAAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLPQGCH*QGSKGA
Trigger: GGCCCCTTTTGAGCCCTGCCAGTGACAGCCCTGAGG...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp CCAAGTGCTGGCCCGGGGTCAGCGGGGCTCACTGCCTaGGTGACCACGTCACTGCACATCCCTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSAGPGSAGLTA*VTTSLHIPLSQ
Trigger: CTGGGAAAGAGGGATGTGCAGTGACGTGGTCACCAAGGCAGTGAGCCCCGCTGACCCCGGGCCAGCACTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAGCAGGAAGCACAGGGTaGCTCCCGTCTTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAAGSTG*LPSCVR
Trigger: ACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGC...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCTCTGGAGATTTCATTaGCTCTGCTTTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPLWRFH*LCFGQL
Trigger: CAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCCGTCTACATCCAGCTaGTCAGAACTATTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPPSTSS*SELFSF
Trigger: GAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGGGGCCCCCATCGTCTaGACCAGCACGTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQGAPIV*TSTSGP
Trigger: GGGCCCTGACGTGCTGGTGCAGACGATGGGGGCCCC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCCGCGTGTGCAGTTACTaGCCTTCCCGGCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTRVCSY*PSRPWV
Trigger: CACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCG...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGGAGTCAGCATAACCTaGCCTTCTGACGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVGVSIT*PSDVMS
Trigger: AGACATCACGTCAGAAGGCCAGGTTATGCTGACTCC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGACCATCCACCAGCTTCTaGGTCATCAAGATTATCCTG +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGPSTSF*VIKIIL
Trigger: CAGGATAATCTTGATGACCCAGAAGCTGGTGGATGG...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGTGCATGTCAGCAGGGTaGCTGAGCTGGACCGTCACG +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLCMSAG*LSWTVT
Trigger: CGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCA...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGCCCTCGGCCCCCGTCTaGGGCACCAGGACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQPSAPV*GTRTIC
Trigger: GCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGG...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGAGAGTAAGGCCACTGTaGATCCGCAATAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLRVRPL*IRNRGM
Trigger: CATCCCTCTATTGCGGATCCACAGTGGCCTTACTCT...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGCACCACGGACTTTGTaGAGAGAAAGATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVAPRTL*RERCFG
Trigger: CCCAAAGCATCTTTCTCTCCACAAAGTCCGTGGTGC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGATGTCTTAAGCGTTGCTaGGCGCTGGGCGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGCLKRC*ALGEWK
Trigger: TTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACA...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGACTGTATGATGGAATaGGATCTTGTCGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVDCMME*DLVGFQ
Trigger: CTGGAAGCCGACAAGATCTCATTCCATCATACAGTC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGTGGGATACATCCTGCTaGCTTTCCCACCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLWDTSC*LSHRPL
Trigger: CAAGGGCCGGTGGGAAAGTCAGCAGGATGTATCCCA...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGTGTGGGCGCCCACGGTaGCGAACTCGCCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQCGRPR*RTRPLG
Trigger: TCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACA...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAAGCCAGGGTTACACCTaGAGTACTGCTTCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRASQGYT*STASRR
Trigger: TCGGCGGGAAGCAGTACTTCAGGTGTAACCCTGGCT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGACACATCATAGAAAAGTaGCTCGAGGAAGACATTGGC +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGHIIEK*LEEDIG
Trigger: GCCAATGTCTTCCTCGAGTCACTTTTCTATGATGTG...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTCCCCAACATCACCACTaGGTCGCATCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGPQHHH*VASPPR
Trigger: ACGTGGAGGTGATGCGACTCAGTGGTGATGTTGGGG...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAAACCTTCCATCCACCTaGGGAGGCACAGTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRANLPST*GGTVEA
Trigger: GGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCTCTTCTCACCTGGATTaGAGGCTCACTAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPSSHLD*RLTKKR
Trigger: TCTCTTCTTAGTGAGCCTGCAATCCAGGTGAGAAGA...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGCACCTCATCGCCTCCTaGGATCCTCTCCCCAACATC +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLHLIAS*DPLPNI
Trigger: GATGTTGGGGAGAGGATCGCAGGAGGCGATGAGGTG...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGCTCCTTCGGAAAGATaGTCGATAAAGTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVAPSER*SIKSSV
Trigger: CACCGAAGACTTTATCGAGCATCTTTCCGAAGGAGC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGAGAGAGGCTGCAACGTaGAAGGCAGGCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQREAAT*KAGPGP
Trigger: GGGCCCAGGGCCTGCCTTGCACGTTGCAGCCTCTCT...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCATGGGGTCCATTCTGCTaGGGCCCCTGGAATACCACT +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAWGPFC*GPWNTT
Trigger: AGTGGTATTCCAGGGGCCCCAGCAGAATGGACCCCA...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGCAGGGTGGCTGAGCTaGACCGTCACGCGCACGATC +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSAGWLS*TVTRTI
Trigger: GATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGGGGACAGGCCCACCATaGAGACTACTCTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPGTGPP*RLLCWR
Trigger: GCGCCAACAGAGTAGTCTCCATGGTGGGCCTGTCCC...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCTCTCTCCAAGGCACTTaGAAACAATATCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPSLQGT*KQYLDL
Trigger: CAGGTCAAGATATTGTTTTCAAGTGCCTTGGAGAGA...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGLICKS*DNQTEG
Trigger: ACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGATGGACTGGAGACAGATaGCCCATTTACAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGWTGDR*PIYKCS
Trigger: AGAACATTTGTAAATGGGTCATCTGTCTCCAGTCCA...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCGTTCGGCTTCCGTCTaGCGCGGCCACCGGCGACTC +
Preference number: 4 (lower is better)
Translates to: RQPSPELLQFVLIHKPLARSASV*RGHRRL
Trigger: GAGTCGCCGGTGGCCGCGGCAGACGGAAGCCGAACG...CGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCAGGTTGGTCAGCTGTaGCCATCATGGTATAAGATT +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVQVGQL*PSWYKI
Trigger: AATCTTATACCATGATGGGCACAGCTGACCAACCTG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAACTGCATCGGATCATTaGTGCCCAGGGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRATASDH*CPGPSW
Trigger: CCATGAAGGCCCTGGGCAGCAATGATCCGATGCAGT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCACCCACCGGCCCTTGTTaGTGCCTAGACTGTATGATG +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAPTGPC*CLDCMM
Trigger: CATCATACAGTCTAGGCAGCAACAAGGGCCGGTGGG...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGGGGAGACGGCCGCTTaGCCCTCTTCTCATCGCGGA +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQGETAA*PSSHRG
Trigger: TCCGCGATGAGAAGAGGGGCAAGCGGCCGTCTCCCC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCGCATCTCCAGAAGCTaGGCTTCACGGTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLRISRS*ASRSAS
Trigger: TGATGCTGACCGTGAAGCGCAGCTTCTGGAGATGCG...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGTTCACCTCCCCATCATaGTGCTTCACAATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLFTSPS*CFTICN
Trigger: ATTGCAGATTGTGAAGCAGCATGATGGGGAGGTGAA...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTGTCCCAGGAGGCTTCTaGTTTCACCTCCCCATCATG +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLVPGGF*FHLPIM
Trigger: CATGATGGGGAGGTGAAAGCAGAAGCCTCCTGGGAC...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGATTGCGTAACACCAGTTaGATGTCAGCAGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGLRNTS*MSAGWL
Trigger: CAGCCACCCTGCTGACATGCAACTGGTGTTACGCAA...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAACTTTCCCAAGATGGTaGTACAGGAGGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRATFPRW*YRRPLL
Trigger: CAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCACCCAGTCACACACCTaGCCCCTGTCCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSTQSHT*PLSPLL
Trigger: CAGCAGAGGGGACAGGGGGCAGGTGTGTGACTGGGT...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGTATTCTCGTTCTTCATaGAGGGATCCTGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVYSRSS*RDPGPH
Trigger: ATGAGGACCAGGATCCCTCCATGAAGAACGAGAATA...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAAGCGTTGCTGAGCGCTaGGCGAGTGGAAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRASVAER*ASGKKT
Trigger: GGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCTACGTGTCTTTGCTTaGATGATTCCCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVLRVFA*MIPKSH
Trigger: GTGGGATTTGGGAATCATCCAAGCAAAGACACGTAG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCTTCTGCTGGGGCCCCTaGAATACCACTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTFCWGP*NTTASR
Trigger: TCTGCTGGCAGTGGTATTCCAGGGGCCCCAGCAGAA...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAACCAGGGTGGGAGGCTaGGGGGTCCCCCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERTRVGG*GVPQRH
Trigger: GTGCCTCTGGGGGACCCCCCAGCCTCCCACCCTGGT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGCTGCTGTGAGGGTCTaGAGACTAACCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLAAVRV*RLTSTL
Trigger: GAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGGCAGCAGCAGTGCTaGCCTCTCACCCAGGCCATA +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQGQQQC*PLTQAI
Trigger: TATGGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCC...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGACAGGAGGCCGCTGCTaGGTGGATGGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQTGGRC*VDGSAT
Trigger: GGTGGCTGAGCCATCCACCCAGCAGCGGCCTCCTGT...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGCCTGGCCCACCACTCTaGAGACCGCACCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQPGPPL*RPHLLP
Trigger: AGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGG...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGCATAACCTGGCCTTCTaGCGTGATGTCTATAATACA +
Preference number: 4 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVHNLAF*RDVYNT
Trigger: TGTATTATAGACATCACGTCAGAAGGCCAGGTTATG...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGTTCTGGTGTTCTTCTaGGGAGTCAGCATAACCTGG +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGVLVFF*GVSITW
Trigger: CCAGGTTATGCTGACTCCTCAGAAGAACACCAGAAC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTTCGTTGCTCGTTCACTaGCAGCTAAATCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGSLLVH*QLNPPG
Trigger: GCCTGGTGGATTTAGCTGGCAGTGAACGAGCAACGA...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTAAGACAACCATGCAGTaGGGCTCCTTGCTGACGGAA +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLKTTMQ*GSLLTE
Trigger: TTCCGTCAGCAAGGAGCCGCACTGCATGGTTGTCTT...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCTCCTGCCTGCCAAGTaGTGGCCCGGGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLLLPAK*WPGVSG
Trigger: CCCGCTGACCCCGGGCCAGCACTTGGCAGGCAGGAG...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAGGAGACCGCACCTCCTaGCTGCCAAGTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERGDRTS*LPSAGP
Trigger: CGGGCCAGCACTTGGCAGGCAGGAGGTGCGGTCTCC...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCAACACCATTAGTGTCTaGAGCCCACCAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTNTISV*SPPGRH
Trigger: GTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGTT...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGCTCCATCCCAGGTACTaGGGTCCATTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQLHPRY*GPFCWG
Trigger: GCCCCAGCAGAATGGACCCCAGTACCTGGGATGGAG...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp TTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGCGGCACGAAGGATTTaGCAGGATTCAAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: FPALGAICGPTHTKVPLLAARRI*QDSSRM
Trigger: CATCCTACTTGAATCCTGTCAAATCCTTCGTGCCGC...CAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTGTGTCTTTGCTTGGATaGTTCCCAAATCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLVSLLG*FPNPTG
Trigger: CCCTGTGGGATTTGGGAATCATCCAAGCAAAGACAC...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGATTATCCTGAGAGCTaGAATCATCAGCATTTAAGT +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGDYPES*NHQHLS
Trigger: ACTTAAATGCTGATGATTTCAGCTCTCAGGATAATC...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACAGCCAGCACGCTCCTaGGGTACTTTTCAATATAAG +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGQPARS*GTFQYK
Trigger: CTTATATTGAAAAGTACCTCAGGAGCGTGCTGGCTG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGATCACTTCTTTATATGTaGACTCTTCGCATTTACACG +
Preference number: 4 (lower is better)
Translates to: AGPSASPAAAFVSLANWGSLLYM*TLRIYT
Trigger: CGTGTAAATGCGAAGAGTTCACATATAAAGAAGTGA...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGRFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATGTCCCGCCCACACCATaGACGGTGGGCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDVPPTP*TVGLGA
Trigger: CGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGAC...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAACCGCACCTCCTGCCTaGCAAGTGCTGGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARTAPPA*QVLARG
Trigger: ACCCCGGGCCAGCACTTGGCAGGCAGGAGGTGCGGT...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCATTTACAAATGTTCTaGTGTTCTTCTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPHLQMF*CSSEES
Trigger: TGACTCCTCAGAAGAACACCAGAACATTTGTAAATG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTAGACTTGAGGAGCTTTaGCATTTGCGGCACGAAGGA +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLRLEEL*HLRHEG
Trigger: TCCTTCGTGCCGCAAATGCCAAAGCTCCTCAAGTCT...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCATCAAGTCAGGAACTCTaGCTCGTTCTACTCCACTGT +
Preference number: 4 (lower is better)
Translates to: ACAVTALPGLGCHLRADPSSQEL*LVLLHC
Trigger: ACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGA...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGACACACTATGCTCTCTaGCTTTCAACGTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPTHYAL*LSTSDG
Trigger: GCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGT...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAGCCGAGAAGTTAAAATaGCCCAAAGACCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: ACAVTALPGLGCHLRADPAEKLK*PKDLPR
Trigger: TCTAGGAAGGTCTTTGGGTCATTTTAACTTCTCGGC...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGTGGCTGTGTGAATCTTaGCCCAGGACTCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQWLCES*PRTPVP
Trigger: AGGGACAGGAGTCCTGGGTCAAGATTCACACAGCCA...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATGCGACTCTTCGGGGTTaGCCCGGCGGGAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDATLRG*PGGRGP
Trigger: CGGCCCCCTCCCGCCGGGTCAACCCCGAAGAGTCGC...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAGGTCCCCAGCCAGCATaGGCGAGAAGGAGCGCAACT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERGPQPA*ARRSAT
Trigger: AGTTGCGCTCCTTCTCGCGCATGCTGGCTGGGGACC...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACGCATCACCTCCACGTaGAGCCGACCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERRITST*SRPATS
Trigger: AGAGGTGGCAGGTCGGCTGCACGTGGAGGTGATGCG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGATCAGGGCAGCAGCAGTaGTGGCCTCTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARSGQQQ*WPLTQA
Trigger: GGCCTGGGTGAGAGGCCAGCACTGCTGCTGCCCTGA...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACAGCTGTGCCCATCATaGTATAAGATTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGQLCPS*YKIFQS
Trigger: GCTCTGGAAAATCTTATACCATGATGGGCACAGCTG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAAAGCTCATTCAGAGCTaGGTCAGCATTCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGKLIQS*VSIQIH
Trigger: GTGAATCTGAATGCTGACCCAGCTCTGAATGAGCTT...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAAATATCCTGTCCCCATaGTGTAGCTGTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGNILSP*CSCIGL
Trigger: CAGTCCAATACAGCTACACCATGGGGACAGGATATT...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCCGAGTCAGCAGAAGCTaGGTTTTCAACATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTRVSRS*VFNIGC
Trigger: GCAGCCAATGTTGAAAACCCAGCTTCTGCTGACTCG...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGAGGCCGCTGCTGGGTaGATGGCTCAGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREAREAAAG*MAQPPR
Trigger: TCGTGGTGGCTGAGCCATCCACCCAGCAGCGGCCTC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATAGGGCCCGAGGGAAGTaGCGGGGTGGGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDRARGK*RGGARD
Trigger: ATCCCTGGCCCCACCCCGCCACTTCCCTCGGGCCCT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCAGCCAAGTGAGAACTaGGTCACGATATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLQPSEN*VTIWNK
Trigger: TTTGTTCCATATCGTGACTCAGTTCTCACTTGGCTG...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCCCAGCCCCACACTCTaGGAGTCTGGGAGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLPSPTL*ESGSCR
Trigger: TCGGCAACTCCCAGACTCTCAGAGTGTGGGGCTGGG...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCTGGTTGCAGCAACTGTaGGAGATTTGTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTWLQQL*EICYPQ
Trigger: CTGAGGGTAACAAATCTCGCACAGTTGCTGCAACCA...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACCACCATGGCGGTCTTaGTGTTACCCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERPPWRS*CYPRGC
Trigger: ACAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCATCATAGTTATCAGCTaGAGGACTCACAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTIIVIS*RTHSSH
Trigger: GTGGCTACTGTGAGTCCTGCAGCTGATAACTATGAT...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTCAGGAAGAATTCCCATaGCGCACAGTTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGQEEFP*RTVGYL
Trigger: AAGATATCCAACTGTGCGGCATGGGAATTCTTCCTG...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCAGGAGCTTTGGCATTTaGGGCACGAAGGATTTGACA +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTRSFGI*GTKDLT
Trigger: TGTCAAATCCTTCGTGCCGCAAATGCCAAAGCTCCT...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAACCTCCCCATCATGCTaGTTCACAATCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRATSPSC*FTICNS
Trigger: TGAATTGCAGATTGTGAAGCAGCATGATGGGGAGGT...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATAGGTCCCACCCACGCTaGCCGTCCGCCACCATTCCC +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDRSHPR*PSATIP
Trigger: GGGAATGGTGGCGGACGGGCAGCGTGGGTGGGACCT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGCTACAGGAGGCCGCTaGTGGGTGGATGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGATGGR*WVDGSA
Trigger: GGCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGGGCCCAAATCCACCTaGTCAAGTCAGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQGPKST*SSQELW
Trigger: CCAGAGTTCCTGACTTGAGCAGGTGGATTTGGGCCC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGCCTTGGGTGCCATCTaGGGGCCGACCCACACTAAG +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARALGAI*GPTHTK
Trigger: CTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGGC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGACACAGTTGGATATCTTaGGAATTTGCTGACCCTATC +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGHSWIS*EFADPI
Trigger: GATAGGGTCAGCAAATTCCCAAGATATCCAACTGTG...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTTCCCTGGGCATCCTCTaGAATATTGGAGACAATTTC +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGSLGIL*NIGDNF
Trigger: GAAATTGTCTCCAATATTCCAGAGGATGCCCAGGGA...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGTTCTGGGCACACAATaGGGAGGCAGGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARVLGTQ*GGRAPR
Trigger: TCTGGGGGCCCTGCCTCCCCATTGTGTGCCCAGAAC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCGAGAGAAAGATGCTTTaGGGGTTCAATGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PARPQPSCPSPTGERKTTERKML*GFNGSV
Trigger: TACTGACCCATTGAACCCCCAAAGCATCTTTCTCTC...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTaGTGTGCGTGCGCACAGCCACCAACACACACTCTC +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPV*CACAQPPTHTL
Trigger: GAGAGTGTGTGTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTCIPQS*EGFIIV
Trigger: AACTATGATGAAACCCTCTCAACTCTGCGGTATGCA...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 4 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGCATTGGCCACCCCAATaGGACTGTGATTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQHWPPQ*DCDFPA
Trigger: AGCAGGAAAATCACAGTCTCATTGGGGTGGCCAATG...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTAGTGCGGCTCCTTGCTaGCGGAAGAGGAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLSAAPC*RKRRRC
Trigger: ACACCTCCTCCTCTTCCGTCAGCAAGGAGCCGCACT...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGTCACATTTGGAGAACTaGTACTCCTCCTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPSHLEN*YSSCST
Trigger: AGTTGAGCAGGAGGAGTATCAGTTCTCCAAATGTGA...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGTAGCTGTATTGGACTaGAGACAGATGACCCATTTA +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGVAVLD*RQMTHL
Trigger: TAAATGGGTCATCTGTCTCCAGTCCAATACAGCTAC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCTCTTCCTCTTCCTCATaGAAGGTCTCATGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTSSSSS*KVSCVL
Trigger: CAGAACACATGAGACCTTCCATGAGGAAGAGGAAGA...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCGGGGAGGAAAGGCACTaGTTACAATTATGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTGEERH*LQLWFR
Trigger: CCTAAACCATAATTGTAACCAGTGCCTTTCCTCCCC...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCCTCCTGTCCCTAGATTaGTGGCCTTCCACACATAGA +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSLLSLD*WPSTHR
Trigger: TCTATGTGTGGAAGGCCACCAATCTAGGGACAGGAG...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCTGCCTGCCAAGTGCTaGCCCGGGGTCAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLLPAKC*PGVSGA
Trigger: AGCCCCGCTGACCCCGGGCCAGCACTTGGCAGGCAG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGCCCTCTGGTCAGGCCTaGGTACCCAGGAACCCAGTC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGPSGQA*VPRNPV
Trigger: GACTGGGTTCCTGGGTACCCAGGCCTGACCAGAGGG...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGCTTTGGGGGTTCAATaGGTCAGTATCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQALGVQ*VSILGR
Trigger: CCTGCCCAAGATACTGACCCATTGAACCCCCAAAGC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp GCACCCAGAACCTTCCATCCACCTGAGGAGGCACAGTaGAGGCCCCCACTTTACCCGGGTACAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: APRTFHPPEEAQ*RPPLYPGTEET
Trigger: TGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGGTGGATGGAAGGTTCTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCTTGATTCCCGAAGACTaGAGAGATATTCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTLIPED*RDIPRL
Trigger: GAGTCTTGGAATATCTCTTCAGTCTTCGGGAATCAA...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTATGGATCAGCACGTTTaGAGTATGATCGTATTACTG +
Preference number: 4 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGMDQHV*SMIVLL
Trigger: CAGTAATACGATCATACTTCAAACGTGCTGATCCAT...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAGAAAACTCATTGCAATaGTCAAAGACAACCATGCAG +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAENSLQ*SKTTMQ
Trigger: CTGCATGGTTGTCTTTGATCATTGCAATGAGTTTTC...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATCTGAGGAGGCACAGTTaGGGCCCCCACTTTACCCGG +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDLRRHS*GPHFTR
Trigger: CCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAG...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATGCTGGGAAGCGGGTTaGGTTAAAGGGCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERCWEAG*VKGQGR
Trigger: TCTGCCTTGCCCTTTAACTCAACCCGCTTCCCAGCA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGTGGAGTCCCCCATCCTaGAGCCGCCGAGGAACTCGT +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRWSPPS*SRRGTR
Trigger: ACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCA...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGACCACACATTTGGTATaGAAGTCAGTCTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQTTHLV*KSVSRR
Trigger: CCGGCGAGAGACTGACTTGCATACCAAATGTGTGGT...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGAGCCTTCTCCGGAGCTaGTCCAATTCGTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: PSPELLQFVLIHKPLALQSLLRS*SNSCSY
Trigger: GTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCT...CTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGACCGGCCCTTGTTGCTaGCTAGACTGTATGATGGAA +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQTGPCC*LDCMME
Trigger: TTCCATCATACAGTCTAGGCAGCAACAAGGGCCGGT...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGTACTTCAATTGCCAATaGTCCTTCGGAAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPYFNCQ*SFGKML
Trigger: GAGCATCTTTCCGAAGGAGCATTGGCAATTGAAGTA...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGAATGGCCAGAGAGGCTaGAACGTGCAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGNGQRG*NVQGRP
Trigger: GGGCCTGCCTTGCACGTTGCAGCCTCTCTGGCCATT...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGTCAGCGGGGCTCACTaGCTTGGTGACCACGTCACT +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGVSGAH*LGDHVT
Trigger: AGTGACGTGGTCACCAAGGCAGTGAGCCCCGCTGAC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGTTTACAATGTGCTTaGCTCGATCTGCATACCGCA +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQGLQCA*LDLHTA
Trigger: TGCGGTATGCAGATCGAGCCAAGCACATTGTAAACC...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCACTGCTCATCATAGAATaGATCAGCACGTTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: PPFPERPHYTAQAFPLRALLIIE*ISTFEV
Trigger: TACTTCAAACGTGCTGATCCATTCTATGATGAGCAG...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCTTGCAGAACACAAAGTaGGACAGATGCTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSLQNTK*DRCCGN
Trigger: GTTGCCACAGCATCTGTCCCACTTTGTGTTCTGCAA...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGTGGAGACTACTCTGTTaGCGCCTTCAAGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQWRLLC*RLQVPR
Trigger: TCTAGGGACTTGAAGGCGCCAACAGAGTAGTCTCCA...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGTGCCCTTCCCGGCCTTaGGTGCCATCTGCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLCPSRP*VPSAGR
Trigger: TCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCA...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp GGCTCCAGCAGTCACATTCCCAGCTCCGTTCTCTTGTaGAACCTTGGTAGGCCCAGAAACATCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSSSHIPSSVLL*NLGRPRNIFPL
Trigger: GAGGGGGAAGATGTTTCTGGGCCTACCAAGGTTCAACAAGAGAACGGAGCTGGGAATGTGACTGCTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GGAACGGCAACCTCACCTTCCTGTTGGCATCCAGGCTGGAGGCTGGAATCTGTACTGACTTTCAACGTCTaGCGGCTTCCTTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: GTATSPSCWHPGWRLESVLTFNV*RLPLGS
Trigger: TGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAG...TACAGATTCCAGCCTCCAGCCTGGATGCCAACAGGAAGGTGAGGTTGCCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGTGTCTTAAGCGTTGCTaGGCGCTGGGCGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLCLKRC*ALGEWK
Trigger: TTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACA...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGACCGTCATTCTTACCTaGGGGCAGGTCGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGTVILT*GQVELH
Trigger: GTGGAGCTCGACCTGCCCTCAGGTAAGAATGACGGT...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCGCAATAGAGGGATGTaGGGAGGGGGCTTTATCCTC +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLRNRGM*GGGFIL
Trigger: GAGGATAAAGCCCCCTCCTCACATCCCTCTATTGCG...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCATGGAGTCCCCCATCCTaGAGCCGCCGAGGAACTCGT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSWSPPS*SRRGTR
Trigger: ACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCA...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCCTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACTTCAGCCTGTCCCCTaGAGCGCCTGTCTTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQALQPVP*SACLRC
Trigger: GCAACGAAGACAGGCGCTGCAGGGGACAGGCTGAAG...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAACCAGCCCTGTGTCGTaGAAAAAGCATTCATCGCCC +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERTSPVS*KKHSSP
Trigger: GGGCGATGAATGCTTTTTGCACGACACAGGGCTGGT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGTCATTGCCTCTGCTTTaGTCAGCTGCTCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: RQPSPELLQFVLIHKPLASLPLL*SAAPGV
Trigger: AACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGA...CGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATCATTGCCTCTGCTTTaGTCAGCTGCTCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERSLPLL*SAAPGV
Trigger: AACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTAGCGTTGCTGAGCGCTaGGCGAGTGGAAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: PAGPLALEISLPLLWSAASVAER*ASGKKT
Trigger: GGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCT...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATTGCCCCTGCCGGAGCTaGAAGATTCCTCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDCPCRS*KIPPVG
Trigger: CCCAACAGGAGGAATCTTCCAGCTCCGGCAGGGGCA...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTGTGTCCCTCGCCAACTaGGGAGAGAAAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLVSLAN*GEKDNL
Trigger: CAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACAC...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATGTTCTGGTGTTCTTCTaGGGAGTCAGCATAACCTGG +
Preference number: 4 (lower is better)
Translates to: RSCSNSCSYISLWRSSADVLVFF*GVSITW
Trigger: CCAGGTTATGCTGACTCCTCAGAAGAACACCAGAAC...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGTTCTGTTCCAAGATTTaGACCCAGAATTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPFCSKI*TQNSNF
Trigger: GAAATTGGAATTCTGGGTTCAAATCTTGGAACAGAA...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGCGTTCGGCTTCCGTCTaGCGCGGCCACCGGCGACTC +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVRSASV*RGHRRL
Trigger: GAGTCGCCGGTGGCCGCGGCAGACGGAAGCCGAACG...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAACCACCATGGCGGTCTTaGTGTTACCCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQPPWRS*CYPRGC
Trigger: ACAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGG...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp TTCCAAGACTCTCAAGCTGTTTCTGTCGTTCCTGTGCAATCTCCTCCGTTTTCCCCACCATGGCGGTCTTaGTGTTACCCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FQDSQAVSVVPVQSPPFSPPWRS*CYPRGC
Trigger: ACAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGG...GGAAAACGGAGGAGATTGCACAGGAACGACAGAAACAGCTTGAGAGTCTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAATGCTCCGGCAGTTCTaGTTCTCAGGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARMLRQF*FSGDSL
Trigger: AAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCAT...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATAAGATCACCAGGCGCTaGACCACCCAGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDKITRR*TTQGLS
Trigger: ACTGAGACCCTGGGTGGTGCAGCGCCTGGTGATCTT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAACCCACGTGCCCTCTTaGAAGTCGGCAGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRTHVPS*KSAGPT
Trigger: CGTGGGGCCTGCCGACTTCCAAGAGGGCACGTGGGT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATTTCTCAGGGTTCTTGTaGCTCCTGTCGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDFSGFL*LLSALA
Trigger: GGCCAAGGCCGACAGGAGCCACAAGAACCCTGAGAA...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGTGGGACAGATGCTGTaGCAACCCAGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGVGQML*QPSSLQ
Trigger: CTGCAAGCTACTGGGTTGCCACAGCATCTGTCCCAC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp GAGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTaGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: EKDALGVQWVSI*GRKHRVTPVLC
Trigger: ACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGACACACTATGCTCTCTaGCTTTCAACGTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLTHYAL*LSTSDG
Trigger: GCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGT...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGTATCATCCCCAACTTTaGTTCCCGAAGACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPYHPQL*FPKTEE
Trigger: CTCTTCAGTCTTCGGGAATCAAAGTTGGGGATGATA...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACACTGTCAGGGCCAGGTaGGATGCAGAGTATATTCCC +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDTVRAR*DAEYIP
Trigger: GGGAATATACTCTGCATCTCACCTGGCCCTGACAGT...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGGCGGCCGTGAACATTaGCACAGATTCTCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGGGREH*HRFSCV
Trigger: TACGCAAGAGAATCTGTGTCAATGTTCACGGCCGCC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGACCACACATTTGGTATaGAAGTCAGTCTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLTTHLV*KSVSRR
Trigger: CCGGCGAGAGACTGACTTGCATACCAAATGTGTGGT...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ACAGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTGAGAGGTCGTTGCTCGTTCACTaGCAGCTAAATCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TAWFTMCLARSAYRRVERSLLVH*QLNPPG
Trigger: GCCTGGTGGATTTAGCTGGCAGTGAACGAGCAACGA...CCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp GCTGCTGTGAGGGTCTGGAGACTAACCAGCACACTCCCTGCACCAGCCCAGCCGATTTATTCTTGTTTTTaGCAGCACTCTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAVRVWRLTSTLPAPAQPIYSCF*QHSDLQ
Trigger: TTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAAT...CGGCTGGGCTGGTGCAGGGAGTGTGCTGGTTAGTCTCCAGACCCTCACAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLRFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp GCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATACCGTCTACATCCAGCTaGTCAGAACTATTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: ALVSCSRSFSTSSRRSRIPSTSS*SELFSF
Trigger: GAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGG...TATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGGTGACCTCCATCTGTaGGTATTCGTAATTAAAGTT +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSGDLHL*VFVIKV
Trigger: AACTTTAATTACGAATACGCACAGATGGAGGTCACC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGACTGCATCGGATCATTaGTGCCCAGGGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRTASDH*CPGPSW
Trigger: CCATGAAGGCCCTGGGCAGCAATGATCCGATGCAGT...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTCCTCTGGCGCTCCAGTaGAGATCGTTTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PAGPLALEISLPLLWSAAPLALQ*RSFFFF
Trigger: GAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGG...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGAAGAAAACCTGTCCATaGTCCGGCAGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQPSPELLQFVLIHKPLAKKTCP*SGSSAS
Trigger: AGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTT...CGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACCAGGGCCAGGTGAGATaGAGAGTATATTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDQGQVR*RVYSPS
Trigger: GCTAGGGGAATATACTCTGCATCTCACCTGGCCCTG...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGAAGACTACGTGTCTTTaGTTGGATGATTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQKTTCL*LDDSQI
Trigger: GATTTGGGAATCATCCAAGCAAAGACACGTAGTCTT...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGATCAGCCACCACGAAGTaGCAGGTCCCACCCACGCTG +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRSATTK*QVPPTL
Trigger: CAGCGTGGGTGGGACCTGGCACTTCGTGGTGGCTGA...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACCCATGCCGCACAGTTaGATATCTTGGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERPMPHS*ISWEFA
Trigger: AGCAAATTCCCAAGATATCCAACTGTGCGGCATGGG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCTTCATGGAGGGATCCTaGTCCTCATCCTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVFMEGS*SSSSRS
Trigger: AGAACGAGAGGATGAGGACCAGGATCCCTCCATGAA...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGTATTCTCGTTCTTCATaGAGGGATCCTGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPYSRSS*RDPGPH
Trigger: ATGAGGACCAGGATCCCTCCATGAAGAACGAGAATA...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAGCGTTGCTGAGCGCTaGGCGAGTGGAAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSVAER*ASGKKT
Trigger: GGTTTTCTTTCCACTCGCCCAGCGCTCAGCAACGCT...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAAAGGATCTGGACTTaGGGCAGGCACAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRQRIWT*GRHRQG
Trigger: TCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTG...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCAAATCTCGCCGGTTCATaGGTCGTATCCGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: HNILSPWCSCIGLETDDPNLAGS*VVSAPP
Trigger: TGGCGGTGCGGATACGACCCATGAACCGGCGAGATT...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR TCA 90 bp GCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATACAGCCAAGTGAGAACTaGGTCACGATATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: ALVSCSRSFSTSSRRSRIQPSEN*VTIWNK
Trigger: TTTGTTCCATATCGTGACTCAGTTCTCACTTGGCTG...TATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGCCAGGGCCTTCATGGTaGCCTCCATCTGTGCGTATT +
Preference number: 4 (lower is better)
Translates to: SFPGLASQILPAGPLALEPGPSW*PPSVRI
Trigger: AATACGCACAGATGGAGGTCACCATGAAGGCCCTGG...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTATGCTGCAAGGTTACTaGGTCCTGGATCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLMLQGY*VLDLEN
Trigger: ATTCTCCAGATCCAGGACTCAGTAACCTTGCAGCAT...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCCAAGGGTGGCTGTGTaGATCTTGACCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLPRVAV*ILTQDS
Trigger: GGAGTCCTGGGTCAAGATTCACACAGCCACCCTTGG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTCGTTGCTCGTTCACTaGCAGCTAAATCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSLLVH*QLNPPG
Trigger: GCCTGGTGGATTTAGCTGGCAGTGAACGAGCAACGA...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATTTCTGTCGTTCCTGTaGAATCTCCTCCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERFLSFL*NLLRFP
Trigger: AGGAAAACGGAGGAGATTGCACAGGAACGACAGAAA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATCAGGAAGAATTCCCATaGCGCACAGTTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: RSCSNSCSYISLWRSSADQEEFP*RTVGYL
Trigger: AAGATATCCAACTGTGCGGCATGGGAATTCTTCCTG...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAGCCTTCTCCGGAGCTaGTCCAATTCGTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSLLRS*SNSCSY
Trigger: GTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCT...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTAAGAAAACCTGTCCATaGTCCGGCAGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLKKTCP*SGSSAS
Trigger: AGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTT...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTGCTGTTATTCAACGTTaGTTCTCTCTCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAGPLALEISLPLLWSAAAVIQR*FSLLSP
Trigger: TGGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGC...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAAGGATTCAAGTAGGATaGTGCAAGGTTACTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERRIQVG*CKVTES
Trigger: GGACTCAGTAACCTTGCAGCATCCTACTTGAATCCT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGTGCTGCTTCACAATCTaGAATTCAAAGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: SILGRKHRVTPVLCACAQCCFTI*NSKNSS
Trigger: AGAGGAGTTCTTTGAATTGCAGATTGTGAAGCAGCA...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAGACTCCCGTCTTGTGTaGGTGCGCACAGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRDSRLV*VRTATN
Trigger: GTTGGTGGCTGTGCGCACGCACACAAGACGGGAGTC...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATACATCCACCACACATTTaGTATGCAAGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALVSCSRSFSTSSRRSRIHPPHI*YASQSL
Trigger: GAGAGACTGACTTGCATACCAAATGTGTGGTGGATG...TATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACATCCACCACACATTTaGTATGCAAGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERHPPHI*YASQSL
Trigger: GAGAGACTGACTTGCATACCAAATGTGTGGTGGATG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGATCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: HIPLSQPQADISPHREARSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCGGTTTACAATGTGCTTaGCTCGATCTGCATACCGCA +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVGLQCA*LDLHTA
Trigger: TGCGGTATGCAGATCGAGCCAAGCACATTGTAAACC...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCCCCATGCCGCACAGTTaGATATCTTGGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVPMPHS*ISWEFA
Trigger: AGCAAATTCCCAAGATATCCAACTGTGCGGCATGGG...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCACACTGGACACCTCGCTaGAGGAGTCTCCGTCTACAT +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAHWTPR*RSLRLH
Trigger: ATGTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTG...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTCACTGGACACCTCGCTaGAGGAGTCTCCGTCTACAT +
Preference number: 4 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTHWTPR*RSLRLH
Trigger: ATGTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTG...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTGACTTTCAACGTCTaGCGGCTTCCTTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRLTFNV*RLPLGS
Trigger: TGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAG...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACACACTATGCTCTCTaGCTTTCAACGTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGTHYAL*LSTSDG
Trigger: GCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGT...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCACTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGALICKS*DNQTEG
Trigger: ACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAG...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCACTGATCTGCAAGAGCTaGGATAACCAGACCGAGGGT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSLICKS*DNQTEG
Trigger: ACCCTCGGTCTGGTTATCTCAGCTCTTGCAGATCAG...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLCIPQS*EGFIIV
Trigger: AACTATGATGAAACCCTCTCAACTCTGCGGTATGCA...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVCIPQS*EGFIIV
Trigger: AACTATGATGAAACCCTCTCAACTCTGCGGTATGCA...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp GGGCGAGTGGAAAGAAAACCTGTCCATGCTCCGGCAGTTCTGCTTCTCAGGAGATTGATTCCCGAAGACTaGAGAGATATTCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GRVERKPVHAPAVLLLRRLIPED*RDIPRL
Trigger: GAGTCTTGGAATATCTCTTCAGTCTTCGGGAATCAA...TCTCCTGAGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTTTCCACTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCGTTCTGGTGTTCTTCTaGGGAGTCAGCATAACCTGG +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGVLVFF*GVSITW
Trigger: CCAGGTTATGCTGACTCCTCAGAAGAACACCAGAAC...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AGACAGCCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGTGGACTGGAGACAGATaGCCCATTTACAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: RQPSPELLQFVLIHKPLAWTGDR*PIYKCS
Trigger: AGAACATTTGTAAATGGGTCATCTGTCTCCAGTCCA...CGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCACTGTCAGGGCCAGGTaGGATGCAGAGTATATTCCC +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGTVRAR*DAEYIP
Trigger: GGGAATATACTCTGCATCTCACCTGGCCCTGACAGT...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAGACTTCACTTCGACTTaGACTCTCCGGGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRDFTST*TLRDCP
Trigger: GGGGCAGTCCCGGAGAGTTCAAGTCGAAGTGAAGTC...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: PAGPLALEISLPLLWSAAGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTTCGTTGCTCGTTCACTaGCAGCTAAATCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TILVLHGGILVLILSFCFSLLVH*QLNPPG
Trigger: GCCTGGTGGATTTAGCTGGCAGTGAACGAGCAACGA...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTCCACCATGGCGGTCTTaGTGTTACCCCCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLPPWRS*CYPRGC
Trigger: ACAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGG...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGTCTGCTTTGGTCAGCTaGTCCCGGAGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRSALVS*SRSFST
Trigger: AGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGA...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AGAACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTCTGCTTTGGTCAGCTaGTCCCGGAGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: RTILVLHGGILVLILSFCSALVS*SRSFST
Trigger: AGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGA...GCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTCAGGAAGAATTCCCATaGCGCACAGTTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: PAGPLALEISLPLLWSAAQEEFP*RTVGYL
Trigger: AAGATATCCAACTGTGCGGCATGGGAATTCTTCCTG...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCCCTCTGGCGCTCCAGTaGAGATCGTTTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGPLALQ*RSFFFF
Trigger: GAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGG...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACGCTGTTATTCAACGTTaGTTCTCTCTCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDAVIQR*FSLLSP
Trigger: TGGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGC...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAACAGGGCCAGGTGAGATaGAGAGTATATTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQQGQVR*RVYSPS
Trigger: GCTAGGGGAATATACTCTGCATCTCACCTGGCCCTG...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGGCAACCCAGTAGCTTaGAGGATTTTAACCATGCAC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGGNPVA*RILTMH
Trigger: GTGCATGGTTAAAATCCTGCAAGCTACTGGGTTGCC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTTTGTGGAGAGAAAGATaGTTTGGGGGTTCAATGGGT +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLLWRER*FGGSMG
Trigger: ACCCATTGAACCCCCAAAGCATCTTTCTCTCCACAA...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTTCTCTCGCCGGTTCATaGGTCGTATCCGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLSLAGS*VVSAPP
Trigger: TGGCGGTGCGGATACGACCCATGAACCGGCGAGAGA...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGGGAGTCAGCATAACCTaGCCTTCTGACGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRGVSIT*PSDVMS
Trigger: AGACATCACGTCAGAAGGCCAGGTTATGCTGACTCC...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AGAACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCGGAGTCAGCATAACCTaGCCTTCTGACGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: RTILVLHGGILVLILSFCGVSIT*PSDVMS
Trigger: AGACATCACGTCAGAAGGCCAGGTTATGCTGACTCC...GCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGTATTCTCGTTCTTCATaGAGGGATCCTGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLYSRSS*RDPGPH
Trigger: ATGAGGACCAGGATCCCTCCATGAAGAACGAGAATA...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTCATACATAAGCCTCTaGCGCTCCAGTGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSYISL*RSSADR
Trigger: ACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGA...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAAAGGATCTGGACTTaGGGCAGGCACAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGQRIWT*GRHRQG
Trigger: TCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTG...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCCATCCTCTGGAATATTaGAGACAATTTCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSHPLEY*RQFQKS
Trigger: TGACTTTTGAAATTGTCTCCAATATTCCAGAGGATG...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAGTTCTGGTGTTCTTCTaGGGAGTCAGCATAACCTGG +
Preference number: 4 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQVLVFF*GVSITW
Trigger: CCAGGTTATGCTGACTCCTCAGAAGAACACCAGAAC...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGACCAGGGCCTTCATGGTaGCCTCCATCTGTGCGTATT +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRPGPSW*PPSVRI
Trigger: AATACGCACAGATGGAGGTCACCATGAAGGCCCTGG...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATTGTCTTAAGCGTTGCTaGGCGCTGGGCGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHCLKRC*ALGEWK
Trigger: TTTCCACTCGCCCAGCGCTCAGCAACGCTTAAGACA...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGAAGAAAGTTGAGTaGAATGAACTGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDRKKVE*NELSGP
Trigger: TGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCT...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTAAGCTGTTGGTCATTTaGTGGAAAGACACATACGGT +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLKLLVI*WKDTYG
Trigger: ACCGTATGTGTCTTTCCATCAAATGACCAACAGCTT...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCATGGAGTCCCCCATCCTaGAGCCGCCGAGGAACTCGT +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPWSPPS*SRRGTR
Trigger: ACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCA...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGTGGTTGCAGCAACTGTaGGAGATTTGTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRWLQQL*EICYPQ
Trigger: CTGAGGGTAACAAATCTCGCACAGTTGCTGCAACCA...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATCTGCTTTGGTCAGCTaGTCCCGGAGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: HNILSPWCSCIGLETDDPSALVS*SRSFST
Trigger: AGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGA...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACTTTCTGTCGTTCCTGTaGAATCTCCTCCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDFLSFL*NLLRFP
Trigger: AGGAAAACGGAGGAGATTGCACAGGAACGACAGAAA...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCCCGTCTACATCCAGCTaGTCAGAACTATTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGPSTSS*SELFSF
Trigger: GAACGAGAATAGTTCTGAGCAGCTGGATGTAGACGG...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGCTGTTTAATATGGACTaGATCGGATCATTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGLFNMD*IGSLLP
Trigger: GGGCAGCAATGATCCGATGCAGTCCATATTAAACAG...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTATGCTCCGGCAGTTCTaGTTCTCAGGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: NILSPWCSCIGLETDDPFMLRQF*FSGDSL
Trigger: AAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCAT...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAAAGAAAACCTGTCCATaGTCCGGCAGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAKKTCP*SGSSAS
Trigger: AGAAGCAGAACTGCCGGAGCATGGACAGGTTTTCTT...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCAGGCAGACGACGATTaGGGCTCGCAAATGATTTCG +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLQADDD*GSQMIS
Trigger: CGAAATCATTTGCGAGCCGCAATCGTCGTCTGCCTG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTCCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLPPLSL*SPPSCS
Trigger: GCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGG...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCAGGAGTCAGCATAACCTaGCCTTCTGACGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: HNILSPWCSCIGLETDDPGVSIT*PSDVMS
Trigger: AGACATCACGTCAGAAGGCCAGGTTATGCTGACTCC...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAATATCCTGTCCCCATaGTGTAGCTGTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDNILSP*CSCIGL
Trigger: CAGTCCAATACAGCTACACCATGGGGACAGGATATT...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCATTCATGGAGGGATCCTaGTCCTCATCCTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAFMEGS*SSSSRS
Trigger: AGAACGAGAGGATGAGGACCAGGATCCCTCCATGAA...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCATCATACATAAGCCTCTaGCGCTCCAGTGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSSYISL*RSSADR
Trigger: ACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGA...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCTGTCCCTAGATTGGTaGCCTTCCACACATAGACGC +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLLSLDW*PSTHRR
Trigger: GCGTCTATGTGTGGAAGGCCACCAATCTAGGGACAG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp AAAACTGCATGGGATCGGCTACTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGAGATTTGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: KTAWDRLLSSFM*VAATVRDLLPS
Trigger: TGAGGGTAACAAATCTCGCACAGTTGCTGCAACCAACATGAACGAGGAGAGTAGCCGATCCCATGCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTGCATACCGCAGAGTTaGGAGGGTTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGCIPQS*EGFIIV
Trigger: AACTATGATGAAACCCTCTCAACTCTGCGGTATGCA...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATTATCATCCCCAACTTTaGTTCCCGAAGACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDYHPQL*FPKTEE
Trigger: CTCTTCAGTCTTCGGGAATCAAAGTTGGGGATGATA...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp CACTGCAAAGTCTTGGGATTAATCCAGGTTGGTCAGCTGTGCCCATCATGGTATAGGCCCAGAGGTCCATaGGAGTTTCTTAAAACCACT +
Preference number: 4 (lower is better)
Translates to: HCKVLGLIQVGQLCPSWYRPRGP*EFLKTT
Trigger: AGTGGTTTTAAGAAACTCTCATGGACCTCTGGGCCT...ATACCATGATGGGCACAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR TCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGATCACCGGCTCCTGTTaGTCCCAGAAGCTGTATTTG +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLITGSC*SQKLYL
Trigger: CAAATACAGCTTCTGGGATCAACAGGAGCCGGTGAT...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCCCAGATTCCTGCACTaGCTTCACTTCGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLPRFLH*LHFDLN
Trigger: GTTCAAGTCGAAGTGAAGTCAGTGCAGGAATCTGGG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGGTTGGTCAGCTGTaGCCATCATGGTATAAGATT +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAQVGQL*PSWYKI
Trigger: AATCTTATACCATGATGGGCACAGCTGACCAACCTG...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: SFPGLASQILPAGPLALEGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CCGGGCATCTCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTCTTCAGCCTGTCCCCTaGAGCGCCTGTCTTCGTTGC +
Preference number: 4 (lower is better)
Translates to: PGISFGKIRIYRIKNNLVLQPVP*SACLRC
Trigger: GCAACGAAGACAGGCGCTGCAGGGGACAGGCTGAAG...AACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGAGATGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR GCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGRFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGGGTGACCTCCATCTGTaGGTATTCGTAATTAAAGTT +
Preference number: 4 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLGDLHL*VFVIKV
Trigger: AACTTTAATTACGAATACGCACAGATGGAGGTCACC...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCGGTGACCTCCATCTGTaGGTATTCGTAATTAAAGTT +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVGDLHL*VFVIKV
Trigger: AACTTTAATTACGAATACGCACAGATGGAGGTCACC...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCCTGTTTAATATGGACTaGATCGGATCATTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGLFNMD*IGSLLP
Trigger: GGGCAGCAATGATCCGATGCAGTCCATATTAAACAG...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCCTCTGGCGCTCCAGTaGAGATCGTTTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLPLALQ*RSFFFF
Trigger: GAAGAAGAAAAACGATCTGCACTGGAGCGCCAGAGG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTAGCTGCTCCAATTCGTaGTCATACATAAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TILVLHGGILVLILSFCFSCSNS*SYISLW
Trigger: CCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCT...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAAGCCTTCTCCGGAGCTaGTCCAATTCGTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRSLLRS*SNSCSY
Trigger: GTATGAGCACGAATTGGAGCAGCTCCGGAGAAGGCT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATATTCAAGTAGGATGCTaGAAGGTTACTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDIQVGC*KVTESW
Trigger: CCAGGACTCAGTAACCTTGCAGCATCCTACTTGAAT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATGCCTGGGGGCGTGGCTaGTGTGAGGGTCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNAWGRG*CEGLET
Trigger: AGTCTCCAGACCCTCACAGCAGCCACGCCCCCAGGC...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSPPLSL*SPPSCS
Trigger: GCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCCAGCTGTGCCCATCATaGTATAAGATTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGQLCPS*YKIFQS
Trigger: GCTCTGGAAAATCTTATACCATGATGGGCACAGCTG...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCTCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGTTTACAATGTGCTTaGCTCGATCTGCATACCGCA +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAGLQCA*LDLHTA
Trigger: TGCGGTATGCAGATCGAGCCAAGCACATTGTAAACC...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATTCATTCACCACAGCGTaGTTTACAATGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDSFTTA*FTMCLA
Trigger: AGCCAAGCACATTGTAAACCACGCTGTGGTGAATGA...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGAAGCTCATTCAGAGCTaGGTCAGCATTCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRKLIQS*VSIQIH
Trigger: GTGAATCTGAATGCTGACCCAGCTCTGAATGAGCTT...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAAAGCTCATTCAGAGCTaGGTCAGCATTCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAKLIQS*VSIQIH
Trigger: GTGAATCTGAATGCTGACCCAGCTCTGAATGAGCTT...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCCCCATGCCGCACAGTTaGATATCTTGGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGPMPHS*ISWEFA
Trigger: AGCAAATTCCCAAGATATCCAACTGTGCGGCATGGG...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCCCATATTGTATCAGCTaGCTCCTTACAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVPYCIS*LLTVKS
Trigger: AGATTTGACTGTAAGGAGCCAGCTGATACAATATGG...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCGTTCTTCCACTCCCTaGGCATCCTCTGGAATATTG +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLRSSTP*ASSGIL
Trigger: CAATATTCCAGAGGATGCCCAGGGAGTGGAAGAACG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTCTCTCCAAGGCACTTaGAAACAATATCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSLQGT*KQYLDL
Trigger: CAGGTCAAGATATTGTTTTCAAGTGCCTTGGAGAGA...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521515.1
CDS-3UTR TCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCACAGCCAAGTGAGAACTaGGTCACGATATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAQPSEN*VTIWNK
Trigger: TTTGTTCCATATCGTGACTCAGTTCTCACTTGGCTG...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGCAGCCAAGTGAGAACTaGGTCACGATATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: SFPGLASQILPAGPLALEQPSEN*VTIWNK
Trigger: TTTGTTCCATATCGTGACTCAGTTCTCACTTGGCTG...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCATTGATTCCCGAAGACTaGAGAGATATTCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQALIPED*RDIPRL
Trigger: GAGTCTTGGAATATCTCTTCAGTCTTCGGGAATCAA...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCTATCATCCCCAACTTTaGTTCCCGAAGACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGYHPQL*FPKTEE
Trigger: CTCTTCAGTCTTCGGGAATCAAAGTTGGGGATGATA...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTAGGAAGAAAGTTGAGTaGAATGAACTGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TILVLHGGILVLILSFCFRKKVE*NELSGP
Trigger: TGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCT...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR TCA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGATGGTCTGGTTTTATTaGGAAGCTGTTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGMVWFY*EAVGHL
Trigger: CAAATGACCAACAGCTTCTCAATAAAACCAGACCAT...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTCAGGTTGGTCAGCTGTaGCCATCATGGTATAAGATT +
Preference number: 4 (lower is better)
Translates to: TILVLHGGILVLILSFCFQVGQL*PSWYKI
Trigger: AATCTTATACCATGATGGGCACAGCTGACCAACCTG...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCACAGGTTGGTCAGCTGTaGCCATCATGGTATAAGATT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSQVGQL*PSWYKI
Trigger: AATCTTATACCATGATGGGCACAGCTGACCAACCTG...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGTGGTTGCAGCAACTGTaGGAGATTTGTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGWLQQL*EICYPQ
Trigger: CTGAGGGTAACAAATCTCGCACAGTTGCTGCAACCA...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAACTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 4 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTGCAGATATTTATTCTTGTTTTTaGCAGCACTCTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RSCSNSCSYISLWRSSADIYSCF*QHSDLQ
Trigger: TTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAAT...ATCTGCACTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATCATAGTTATCAGCTaGAGGACTCACAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SFPGLASQILPAGPLALEIIVIS*RTHSSH
Trigger: GTGGCTACTGTGAGTCCTGCAGCTGATAACTATGAT...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCTCTGGAGATTTCATTaGCTCTGCTTTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NILSPWCSCIGLETDDPFLWRFH*LCFGQL
Trigger: CAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCATTTCTGTCGTTCCTGTaGAATCTCCTCCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSFLSFL*NLLRFP
Trigger: AGGAAAACGGAGGAGATTGCACAGGAACGACAGAAA...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTACTGCATCGGATCATTaGTGCCCAGGGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSTASDH*CPGPSW
Trigger: CCATGAAGGCCCTGGGCAGCAATGATCCGATGCAGT...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGAGCTGCTCCAATTCGTaGTCATACATAAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGSCSNS*SYISLW
Trigger: CCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCT...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGGCTGTTATTCAACGTTaGTTCTCTCTCCTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLAVIQR*FSLLSP
Trigger: TGGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGC...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAACAAAGTGGGACAGATaGTGTGGCAACCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRTKWDR*CGNPVA
Trigger: AGCTACTGGGTTGCCACAGCATCTGTCCCACTTTGT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAATTTTGAAAACTGCATaGGATCGGCTACTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAILKTA*DRLLSS
Trigger: CGAGGAGAGTAGCCGATCCCATGCAGTTTTCAAAAT...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCAATTTTGAAAACTGCATaGGATCGGCTACTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: HNILSPWCSCIGLETDDPILKTA*DRLLSS
Trigger: CGAGGAGAGTAGCCGATCCCATGCAGTTTTCAAAAT...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTTCATTCACCACAGCGTaGTTTACAATGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTSFTTA*FTMCLA
Trigger: AGCCAAGCACATTGTAAACCACGCTGTGGTGAATGA...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTTCATTGCCTCTGCTTTaGTCAGCTGCTCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLSLPLL*SAAPGV
Trigger: AACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGA...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp TCATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGAAGCTCATTCAGAGCTaGGTCAGCATTCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: SFPGLASQILPAGPLALEKLIQS*VSIQIH
Trigger: GTGAATCTGAATGCTGACCCAGCTCTGAATGAGCTT...CTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACACAGTTGGATATCTTaGGAATTTGCTGACCCTATC +
Preference number: 4 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAHSWIS*EFADPI
Trigger: GATAGGGTCAGCAAATTCCCAAGATATCCAACTGTG...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGGGAGGACAAAGGATCTaGACTTGGGGCAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVGGQRI*TWGRHR
Trigger: TCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCC...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTAGGAGGACAAAGGATCTaGACTTGGGGCAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLGGQRI*TWGRHR
Trigger: TCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCC...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATGAAGATTCCTCCTGTTaGGACATCCTTTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDEDSSC*DILCRN
Trigger: ATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTC...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGTTCACTGCAACTTCCTaGCGCAGACGATCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLFTATS*RRRSKV
Trigger: GACTTTAGATCGTCTGCGCCAGGAAGTTGCAGTGAA...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp GCATCCAGGCTGGAGGCTGGAATCTGTAGGGTAACTTaGTATTCTGTTCTTTTATCCAGCTCCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: ASRLEAGICRVT*YSVLLSSSSAM
Trigger: CATTGCTGAGGAGCTGGATAAAAGAACAGAATACAAAGTTACCCTACAGATTCCAGCCTCCAGCCTGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
3UTR CAA 72 bp TCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTaGCTCTCATCCAAGTTAAGAGTAAGGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SPTTEAHHSPRF*LSSKLRVRPLW
Trigger: CCACAGTGGCCTTACTCTTAACTTGGATGAGAGCAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp CTTTCTGAGTTCGTTCAAAGAGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGTCAGCTGTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LSEFVQRVHCKV*GLIQVGQLCPS
Trigger: TGATGGGCACAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTGGACTCTTTGAACGAACTCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR TCA 90 bp ATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCATGGACTGGAGACAGATaGCCCATTTACAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: ILPAGPLALEISLPLLWSWTGDR*PIYKCS
Trigger: AGAACATTTGTAAATGGGTCATCTGTCTCCAGTCCA...TGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCACCAGGGCCTTCATGGTaGCCTCCATCTGTGCGTATT +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPPGPSW*PPSVRI
Trigger: AATACGCACAGATGGAGGTCACCATGAAGGCCCTGG...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp CACTGCAAAGTCTTGGGATTAATCCAGGTTGGTCAGCTGTGCCCATCATGGTATCTGCTTAATGGAATCTaGCCATATTGTATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HCKVLGLIQVGQLCPSWYLLNGI*PYCISW
Trigger: CCAGCTGATACAATATGGTCAGATTCCATTAAGCAG...ATACCATGATGGGCACAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR GCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TTCGTAATTAAAGTTAACTTCACTGGACACCTCGCTGGAGGAGTCTCCGTCTACATCATAGTTATCAGCTaGAGGACTCACAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: FVIKVNFTGHLAGGVSVYIIVIS*RTHSSH
Trigger: GTGGCTACTGTGAGTCCTGCAGCTGATAACTATGAT...GTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTGAAGTTAACTTTAATTACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTTTCTGTCGTTCCTGTaGAATCTCCTCCGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAFLSFL*NLLRFP
Trigger: AGGAAAACGGAGGAGATTGCACAGGAACGACAGAAA...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAAGCTGCTCCAATTCGTaGTCATACATAAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRSCSNS*SYISLW
Trigger: CCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGATGCTCCGGCAGTTCTaGTTCTCAGGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVMLRQF*FSGDSL
Trigger: AAGGCTGTCTCCTGAGAAGCAGAACTGCCGGAGCAT...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGAAAGTCCCAGATTCCTaGACTGACTTCACTTCGACT +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLKVPDS*TDFTST
Trigger: AGTCGAAGTGAAGTCAGTGCAGGAATCTGGGACTTT...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp TTCGTAATTAAAGTTAACTTCACTGGACACCTCGCTGGAGGAGTCTCCGTCTACCATCCACCACACATTTaGTATGCAAGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FVIKVNFTGHLAGGVSVYHPPHI*YASQSL
Trigger: GAGAGACTGACTTGCATACCAAATGTGTGGTGGATG...GTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTGAAGTTAACTTTAATTACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGATTTTGAAAACTGCATaGGATCGGCTACTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLILKTA*DRLLSS
Trigger: CGAGGAGAGTAGCCGATCCCATGCAGTTTTCAAAAT...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GCCATCAAAAGCATTCTGCAGGATATTCTCTCCAAGGCACTTGAAAACAATATCTCATTGCCTCTGCTTTaGTCAGCTGCTCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: AIKSILQDILSKALENNISLPLL*SAAPGV
Trigger: AACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGA...GATATTGTTTTCAAGTGCCTTGGAGAGAATATCCTGCAGAATGCTTTTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CCA 90 bp CATAATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCAGTAGCTGTATTGGACTaGAGACAGATGACCCATTTA +
Preference number: 4 (lower is better)
Translates to: HNILSPWCSCIGLETDDPVAVLD*RQMTHL
Trigger: TAAATGGGTCATCTGTCTCCAGTCCAATACAGCTAC...TGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTTCTACCCAAAAGCATaGAGGACAAAGGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAFYPKA*RTKDLD
Trigger: GTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAA...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATGCGGTGGAGACGCTGTaGGAGAAGTACCCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNAVETL*EKYPLE
Trigger: CTCTAGCGGGTACTTCTCCCACAGCGTCTCCACCGC...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTTTATTGAGAAGCTGTTaGTCATTTGATGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLLLRSC*SFDGKT
Trigger: TGTCTTTCCATCAAATGACCAACAGCTTCTCAATAA...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp GCCATCAAAAGCATTCTGCAGGATATTCTCTCCAAGGCACTTGAAAACAATATCACACACTATGCTCTCTaGCTTTCAACGTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: AIKSILQDILSKALENNITHYAL*LSTSDG
Trigger: GCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGT...GATATTGTTTTCAAGTGCCTTGGAGAGAATATCCTGCAGAATGCTTTTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR TCA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 4 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCATAACCTGGCCTTCTaGCGTGATGTCTATAATACA +
Preference number: 4 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGHNLAF*RDVYNT
Trigger: TGTATTATAGACATCACGTCAGAAGGCCAGGTTATG...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTACCACACATTTGGTATaGAAGTCAGTCTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSTTHLV*KSVSRR
Trigger: CCGGCGAGAGACTGACTTGCATACCAAATGTGTGGT...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACCACACATTTGGTATaGAAGTCAGTCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NILSPWCSCIGLETDDPFTTHLV*KSVSLH
Trigger: GTGAAGAGAGACTGACTTGCATACCAAATGTGTGGT...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR GCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATCCCCTGGAATACCACTaGCAGCAGAGGGGACCATCA +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNPLEYH*QQRGPS
Trigger: TGATGGTCCCCTCTGCTGGCAGTGGTATTCCAGGGG...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AACAATATCTTGACCTGCATACTTTTCTTTGACAGATTCATCCATAGACCAGAACCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NNILTCILFFDRFIHRPEPPLSL*SPPSCS
Trigger: GCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGG...TTCTGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTCAAGATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATCCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNPPLSL*SPPSCS
Trigger: GCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGG...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCACAGTTGGATATCTTaGGAATTTGCTGACCCTATC +
Preference number: 4 (lower is better)
Translates to: NILSPWCSCIGLETDDPFHSWIS*EFADPI
Trigger: GATAGGGTCAGCAAATTCCCAAGATATCCAACTGTG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCGTAGCTGTATTGGACTaGAGACAGATGACCCATTTA +
Preference number: 4 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIAVAVLD*RQMTHL
Trigger: TAAATGGGTCATCTGTCTCCAGTCCAATACAGCTAC...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCCTAAGCTGTTTAATATaGACTGCATCGGATCATTGC +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGLSCLI*TASDHC
Trigger: GCAATGATCCGATGCAGTCCATATTAAACAGCTTAG...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAACTGAGTCCTGGATCTaGAGAATGGTTATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRTESWI*RMVILG
Trigger: CCCCAAAATAACCATTCTCCAGATCCAGGACTCAGT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
3UTR CAA 72 bp AAAAGTGCACCAAATAAAGTAGCAATGCCTCTTCCTTaGTCACCGACTACAGAAGCACATCATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSAPNKVAMPLP*SPTTEAHHSPR
Trigger: CCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCATTGCTACTTTATTTGGTGCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATTTGATTCCCGAAGACTaGAGAGATATTCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHLIPED*RDIPRL
Trigger: GAGTCTTGGAATATCTCTTCAGTCTTCGGGAATCAA...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTGCACAGACAGGGATCTaGAGCTTAAATAACACCAGG +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSAQTGI*SLNNTR
Trigger: CCTGGTGTTATTTAAGCTTCAGATCCCTGTCTGTGC...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TTCGTAATTAAAGTTAACTTCACTGGACACCTCGCTGGAGGAGTCTCCGTCTACGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 4 (lower is better)
Translates to: FVIKVNFTGHLAGGVSVYVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...GTAGACGGAGACTCCTCCAGCGAGGTGTCCAGTGAAGTTAACTTTAATTACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR GCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTAGGTCCCAACACACTATaGTCTCTGACTTTCAACGTC +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLGPNTL*SLTFNV
Trigger: GACGTTGAAAGTCAGAGAGCATAGTGTGTTGGGACC...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTATGGTTGCAGCAACTGTaGGAGATTTGTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLWLQQL*EICYPQ
Trigger: CTGAGGGTAACAAATCTCGCACAGTTGCTGCAACCA...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp AACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGAGACTCGTTCATGTTGGTTaGAGCAACTGTGCGAGATTT +
Preference number: 4 (lower is better)
Translates to: NRFEGRKLSEMNCQGQVRLVHVG*SNCARF
Trigger: AAATCTCGCACAGTTGCTGCAACCAACATGAACGAG...TCTCACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTAGCGTGGTTTACAATGTaGTTGGCTCGATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLAWFTM*LARSAY
Trigger: GTATGCAGATCGAGCCAAGCACATTGTAAACCACGC...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCTCTGGAGATTTCATTaGCTCTGCTTTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSLWRFH*LCFGQL
Trigger: CAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTGGTTTACAATGTGCTTaGCTCGATCTGCATACCGCA +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSGLQCA*LDLHTA
Trigger: TGCGGTATGCAGATCGAGCCAAGCACATTGTAAACC...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGAGATCATTCACCACAGCGTaGTTTACAATGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NRFEGRKLSEMNCQGQVRSFTTA*FTMCLA
Trigger: AGCCAAGCACATTGTAAACCACGCTGTGGTGAATGA...TCTCACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCCCATGCCGCACAGTTaGATATCTTGGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSPMPHS*ISWEFA
Trigger: AGCAAATTCCCAAGATATCCAACTGTGCGGCATGGG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCCATTTACAAATGTTCTaGTGTTCTTCTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGHLQMF*CSSEES
Trigger: TGACTCCTCAGAAGAACACCAGAACATTTGTAAATG...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCAATCTGTTCACATTTaGAGAACTGATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLQSVHI*RTDTPP
Trigger: AGGAGGAGTATCAGTTCTCCAAATGTGAACAGATTG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR TCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTATATCATCCCCAACTTTaGTTCCCGAAGACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLYHPQL*FPKTEE
Trigger: CTCTTCAGTCTTCGGGAATCAAAGTTGGGGATGATA...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTTGGACTGGAGACAGATaGCCCATTTACAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLWTGDR*PIYKCS
Trigger: AGAACATTTGTAAATGGGTCATCTGTCTCCAGTCCA...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAGCACAGACAGGGATCTaGAGCTTAAATAACACCAGG +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPAQTGI*SLNNTR
Trigger: CCTGGTGTTATTTAAGCTTCAGATCCCTGTCTGTGC...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATGTTCAAAGAGTCCACTaGAAAGTCTTGGGATTAATC +
Preference number: 4 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHVQRVH*KVLGLI
Trigger: GATTAATCCCAAGACTTTGCAGTGGACTCTTTGAAC...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR GCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTATCATAGTTATCAGCTaGAGGACTCACAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSIIVIS*RTHSSH
Trigger: GTGGCTACTGTGAGTCCTGCAGCTGATAACTATGAT...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGCAGGAAGAATTCCCATaGCGCACAGTTGGATATCTT +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVQEEFP*RTVGYL
Trigger: AAGATATCCAACTGTGCGGCATGGGAATTCTTCCTG...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCATCCACCACACATTTaGTATGCAAGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSHPPHI*YASQSL
Trigger: GAGAGACTGACTTGCATACCAAATGTGTGGTGGATG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GCCATCAAAAGCATTCTGCAGGATATTCTCTCCAAGGCACTTGAAAACAATATCCAGCTGTGCCCATCATaGTATAAGATTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AIKSILQDILSKALENNIQLCPS*YKIFQS
Trigger: GCTCTGGAAAATCTTATACCATGATGGGCACAGCTG...GATATTGTTTTCAAGTGCCTTGGAGAGAATATCCTGCAGAATGCTTTTGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CCA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCATTTACAAATGTTCTaGTGTTCTTCTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NILSPWCSCIGLETDDPFHLQMF*CSSEES
Trigger: TGACTCCTCAGAAGAACACCAGAACATTTGTAAATG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp TTAATTTCTCCTCCCAGGTCACAGTCATTTCCTGGATTAGCTTCTCAGATTCTTAATATCCTGTCCCCATaGTGTAGCTGTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: LISPPRSQSFPGLASQILNILSP*CSCIGL
Trigger: CAGTCCAATACAGCTACACCATGGGGACAGGATATT...AAGAATCTGAGAAGCTAATCCAGGAAATGACTGTGACCTGGGAGGAGAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CCA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGACTAAGCTGTTTAATATaGACTGCATCGGATCATTGC +
Preference number: 4 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRLSCLI*TASDHC
Trigger: GCAATGATCCGATGCAGTCCATATTAAACAGCTTAG...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATGTGGGGAAGGCACTTTaGCAGGTTTGTCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNVGKAL*QVCRRS
Trigger: AGATCTGCGACAAACCTGCCAAAGTGCCTTCCCCAC...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATTCTGCTTTGGTCAGCTaGTCCCGGAGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNSALVS*SRSFST
Trigger: AGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGA...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp AACAATATCTTGACCTGCATACTTTTCTTTGACAGATTCATCCATAGACCAGAAAGATTTCATTGCCTCTaGTTTGGTCAGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NNILTCILFFDRFIHRPERFHCL*FGQLLP
Trigger: CGGGAGCAGCTGACCAAAGCAGAGGCAATGAAATCT...TTCTGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTCAAGATATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR GCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCACTGTTTAATATGGACTaGATCGGATCATTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPLFNMD*IGSLLP
Trigger: GGGCAGCAATGATCCGATGCAGTCCATATTAAACAG...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCACAGCTGTGCCCATCATaGTATAAGATTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPQLCPS*YKIFQS
Trigger: GCTCTGGAAAATCTTATACCATGATGGGCACAGCTG...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAATCTGACGGCTTCCTTTaGGATCAAGAAGGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKSDGFL*DQEGLE
Trigger: TTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGA...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTGTAGCTGTATTGGACTaGAGACAGATGACCCATTTA +
Preference number: 4 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSVAVLD*RQMTHL
Trigger: TAAATGGGTCATCTGTCTCCAGTCCAATACAGCTAC...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATTCATACATAAGCCTCTaGCGCTCCAGTGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNSYISL*RSSADR
Trigger: ACGATCTGCACTGGAGCGCCAGAGGCTTATGTATGA...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCATTCTACCCAAAAGCATaGAGGACAAAGGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPFYPKA*RTKDLD
Trigger: GTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAA...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCACATAACCTGGCCTTCTaGCGTGATGTCTATAATACA +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPHNLAF*RDVYNT
Trigger: TGTATTATAGACATCACGTCAGAAGGCCAGGTTATG...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAAGGTGATTTTGAAAACTaGATGGGATCGGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKGDFEN*MGSATL
Trigger: GAGAGTAGCCGATCCCATGCAGTTTTCAAAATCACC...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGCTAAGCTGTTTAATATaGACTGCATCGGATCATTGC +
Preference number: 4 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVLSCLI*TASDHC
Trigger: GCAATGATCCGATGCAGTCCATATTAAACAGCTTAG...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR TCA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAATCTTGGGAATTTGCTaGCCCTATCAATGTATGTTC +
Preference number: 4 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPILGIC*PYQCMF
Trigger: GAACATACATTGATAGGGTCAGCAAATTCCCAAGAT...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR GCA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTATTTATTCTTGTTTTTaGCAGCACTCTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLIYSCF*QHSDLQ
Trigger: TTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAAT...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CCA 90 bp TTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTTGCATCCACATCCTCATTCACCACAGCGTaGTTTACAATGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LERFVFTGLRITLFASTSSFTTA*FTMCLA
Trigger: AGCCAAGCACATTGTAAACCACGCTGTGGTGAATGA...GGATGTGGATGCAAACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CCA 90 bp TTAATTTCTCCTCCCAGGTCACAGTCATTTCCTGGATTAGCTTCTCAGATTCTTCATTTACAAATGTTCTaGTGTTCTTCTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LISPPRSQSFPGLASQILHLQMF*CSSEES
Trigger: TGACTCCTCAGAAGAACACCAGAACATTTGTAAATG...AAGAATCTGAGAAGCTAATCCAGGAAATGACTGTGACCTGGGAGGAGAAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp AACAATATCTTGACCTGCATACTTTTCTTTGACAGATTCATCCATAGACCAGAACATAACCTGGCCTTCTaGCGTGATGTCTATAATACA +
Preference number: 4 (lower is better)
Translates to: NNILTCILFFDRFIHRPEHNLAF*RDVYNT
Trigger: TGTATTATAGACATCACGTCAGAAGGCCAGGTTATG...TTCTGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTCAAGATATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR GCA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTAATTTATTCTTGTTTTTaGCAGCACTCTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLIYSCF*QHSDLQ
Trigger: TTGCAGATCAGAGTGCTGGCAAAAACAAGAATAAAT...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR TCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATAGCACGTTTGAAGTATaGTCGTATTACTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNSTFEV*SYYWVI
Trigger: GATAACCCAGTAATACGATCATACTTCAAACGTGCT...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR GCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATTCCATATACTTCAATTaGCAATGCTCCTTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNSIYFN*QCSFGK
Trigger: CTTTCCGAAGGAGCATTGGCAATTGAAGTATATGGA...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CCA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATAAGGTTACTGAGTCCTaGATCTGGAGAATGGTTATT +
Preference number: 4 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNKVTES*IWRMVI
Trigger: AATAACCATTCTCCAGATCCAGGACTCAGTAACCTT...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp GGGCAGCTGTCAGCGAGGCCAGGTTGGTGGCGGAGCCCGAGAGGGTaGCGCTCCGGCGGGCCTCGGGGGCACCCAGCCGGAGTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GQLSARPGWWRSPRG*RSGGPRGHPAGVLC
Trigger: GCACAGGACTCCGGCTGGGTGCCCCCGAGGCCCGCCGGAGCGCCACCCTCTCGGGCTCCGCCACCAACCTGGCCTCGCTGACAGCTGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 90 bp AGTCCCCCATCCTGCAGCCGCCGAGGAACTCGTTCGGCTTCCGTCTaGCGCGGCCACCGGCGACTCTTCGGGGTTGACCCGGCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SPPSCSRRGTRSASV*RGHRRLFGVDPAGG
Trigger: CCCTCCCGCCGGGTCAACCCCGAAGAGTCGCCGGTGGCCGCGGCAGACGGAAGCCGAACGAGTTCCTCGGCGGCTGCAGGATGGGGGACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGCGGGGCTCACTGCCTaGGTGACCACGTCACTGCAC +
Preference number: 5 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVAGLTA*VTTSLH
Trigger: GTGCAGTGACGTGGTCACCAAGGCAGTGAGCCCCGC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAGTCAGCGAGGCCAGGTaGGTGGCGGAGCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGVSEAR*VAEPER
Trigger: CCTCTCGGGCTCCGCCACCAACCTGGCCTCGCTGAC...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp CGCGCACGATCAGGAACAACCGCTCGTCCACGGGCGTGCCCCTGCTaGGCTGAGGGCAGCCATGCACCGCGGAGTCCCAGGAGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RARSGTTARPRACPC*AEGSHAPRSPRRLL
Trigger: CAGAAGCCTCCTGGGACTCCGCGGTGCATGGCTGCCCTCAGCTCAGCAGGGGCACGCCCGTGGACGAGCGGTTGTTCCTGATCGTGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCCCCCGAGGCTGTCTTaGAGCAGCCAAGTGAGAACT +
Preference number: 5 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPPPRLS*SSQVRT
Trigger: AGTTCTCACTTGGCTGCTCAAAGACAGCCTCGGGGG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp CGGCTGAGCCTCCTCCATCCTGGTCACCCTGATGTCCGGGCTGGCTaGCTGCACCATGATGCGGGGCACGGGCTGGTGTGCGAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RLSLLHPGHPDVRAG*LHHDAGHGLVCEGR
Trigger: TCTCCCCTCGCACACCAGCCCGTGCCCCGCATCATGGTGCAGTCAGCCAGCCCGGACATCAGGGTGACCAGGATGGAGGAGGCTCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp CAGGCCCCACGTATCTCACCACGCCCGTTTTGTGGGCGCCCACGGTaGCGAACTCGCCCTCTCGGAGCCACTCCGGGACCTCGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: QAPRISPRPFCGRPR*RTRPLGATPGPRQL
Trigger: AAGCTGACGAGGTCCCGGAGTGGCTCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACGTGGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CCA 90 bp TCTTGGAAGTCGGCAGGCCCCACGTATCTCACCACGCCCGTTTTGTaGGCGCCCACGGTGACGAACTCGCCCTCTCGGAGCCACTCCGGG +
Preference number: 5 (lower is better)
Translates to: SWKSAGPTYLTTPVL*APTVTNSPSRSHSG
Trigger: CCCGGAGTGGCTCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACGTGGGGCCTGCCGACTTCCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS-3UTR CAA 90 bp GGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTCCAGGAGCGCATCGGGAAGGGTGACTCCCGTCTaGTGTGCGTGCGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: GPTHTKVPLLGPSRSASGRVTPV*CACAQP
Trigger: TGGCTGTGCGCACGCACACAAGACGGGAGTCACCCT...TCCCGATGCGCTCCTGGAAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp ACGATCAGGAACAACCGCTCGTCCACGGGCGTGCCCCTGCTGAGCTaGGGGCAGCCATGCACCGCGGAGTCCCAGGAGGCTTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TIRNNRSSTGVPLLS*GQPCTAESQEASAF
Trigger: GAAAGCAGAAGCCTCCTGGGACTCCGCGGTGCATGGCTGCCCTCAGCTCAGCAGGGGCACGCCCGTGGACGAGCGGTTGTTCCTGATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp TGGGTCGTATCCGCACCGCCACTTTCACTTTGGAGTCCCCCATCCTaGAGCCGCCGAGGAACTCGTTCGGCTTCCGTCTGCCGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: WVVSAPPLSLWSPPS*SRRGTRSASVCRGH
Trigger: GTGGCCGCGGCAGACGGAAGCCGAACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGATACGACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
CDS-3UTR CAA 90 bp GCCGGGCCCTCTGCCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAACGGGAAAGAGAGACTaGAGGAGCTTTGGCATTTGC +
Preference number: 5 (lower is better)
Translates to: AGPSASPAAAFVSLANWGTGKRD*RSFGIC
Trigger: GCAAATGCCAAAGCTCCTCAAGTCTCTCTTTCCCGT...TCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGGCAGAGGGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp GGCCGGGCACCCCCAGAAAAGTTCGCCCTAAGGCAGCGGCTCAGCTaGCCCAGGATTTCCGGTTCTCAGGGTTCTTGTGGCTCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GRAPPEKFALRQRLS*PRISGSQGSCGSCR
Trigger: CCGACAGGAGCCACAAGAACCCTGAGAACCGGAAATCCTGGGCCAGCTGAGCCGCTGCCTTAGGGCGAACTTTTCTGGGGGTGCCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGACCCACGTGCCCTCTaGGAAGTCGGCAGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSDPRAL*EVGRPH
Trigger: GTGGGGCCTGCCGACTTCCAAGAGGGCACGTGGGTC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCATTGGCTGCCATTCTaGCTAATGCTTCCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPHWLPF*LMLPVL
Trigger: AAGAACGGGAAGCATTAGCAAGAATGGCAGCCAATG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGGCTGGGACAGGCCCACCCCTGAGGAGGCACAGTaGAGGCCCCCACTTTACCCG +
Preference number: 5 (lower is better)
Translates to: TGERKTTCPRSQGWDRPTPEEAQ*RPPLYP
Trigger: CGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTCAGG...GGTGGGCCTGTCCCAGCCCTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp TGCCTCCGGAGCCGGGGTGACCGCTGTGACAGCTATGACAGGCGGTaGGGAAGGCACTTTGGCAGGTTTGTCGCAGATCTTCAAGGCCGG +
Preference number: 5 (lower is better)
Translates to: CLRSRGDRCDSYDRR*GRHFGRFVADLQGR
Trigger: CCGGCCTTGAAGATCTGCGACAAACCTGCCAAAGTGCCTTCCCCACCGCCTGTCATAGCTGTCACAGCGGTCACCCCGGCTCCGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS-3UTR CAA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCACAGCGCCTGTCTTCGTaGCTCGTTCACTGCCAGCTA +
Preference number: 5 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAQRLSS*LVHCQL
Trigger: TAGCTGGCAGTGAACGAGCAACGAAGACAGGCGCTG...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGCCACCATGGCGGTCTaGCTGTTACCCCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSATMAV*LLPPRL
Trigger: CAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGGC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCGGAAGCTTCCGGCTGTCCCGCCCACACCATGCACGGTGGGCCTGGGGGCGTGGGAAGATTCCTCCTGTaGGGACATCCTTTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: PEASGCPAHTMHGGPGGVGRFLL*GHPLQK
Trigger: TTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCC...CACGCCCCCAGGCCCACCGTGCATGGTGTGGGCGGGACAGCCGGAAGCTTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGGCGGGCAGGCGTTCTaGGGAGGTGAGTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSGGQAF*GGESAG
Trigger: ACCAGCAGACTCACCTCCCAAGAACGCCTGCCCGCC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp CTGCCACCTCATCGCCTCCTGCGATCCTCTCCCCAACATCACCACTaGGTCGCATCACCTCCACGTGCAGCCGACCTGCCACCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPPHRLLRSSPQHHH*VASPPRAADLPPLL
Trigger: AAGGAGAGGTGGCAGGTCGGCTGCACGTGGAGGTGATGCGACTCAGTGGTGATGTTGGGGAGAGGATCGCAGGAGGCGATGAGGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp TCTCTCGCCGGTTCATGGGTCGTATCCGCACCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGCCGCCGAGGAACTCGTTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLAGSWVVSAPPLSL*SPPSCSRRGTRSAS
Trigger: GGAAGCCGAACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGATACGACCCATGAACCGGCGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000524189.6
CDS-3UTR CAA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGACTCGAGGAAGACATaGGCCACCCCAATGAGACTG +
Preference number: 5 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGDSRKT*ATPMRL
Trigger: CAGTCTCATTGGGGTGGCCAATGTCTTCCTCGAGTC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCTGTTGGGACATCCTTaGCAGAAATCACTTCTACAG +
Preference number: 5 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLLLGHP*QKSLLQ
Trigger: CTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAG...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCGACAAGCTTTTGCAATaGTTGATCCAAGTACTCCTG +
Preference number: 5 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPDKLLQ*LIQVLL
Trigger: CAGGAGTACTTGGATCAACAATTGCAAAAGCTTGTC...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCCATTCTCCCAGGTTTTaGCTCTCATCCAAGTTAAGA +
Preference number: 5 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPHSPRF*LSSKLR
Trigger: TCTTAACTTGGATGAGAGCAAAAACCTGGGAGAATG...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp GCAGGGCTGGGCCTGCAGCCTAGGGTTCCTTTTCTCCTTGGCCGGTaGTCCCCTTCTTTCACTATGCCATCCTGTCTCTCCAGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: AGLGLQPRVPFLLGR*SPSFTMPSCLSSPV
Trigger: GACTGGGCTGGAGAGACAGGATGGCATAGTGAAAGAAGGGGAGCACCGGCCAAGGAGAAAAGGAACCCTAGGCTGCAGGCCCAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS-3UTR CAA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGGGATTAAGAATAACCTaGTTTGCATCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLGLRIT*FASTST
Trigger: GGTGGATGTGGATGCAAACAAGGTTATTCTTAATCC...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GGAACGGCAACCTCACCTTCCTGTTGGCATCCAGGCTGGAGGCTGGAATCTGTAGCCACCATGGCGGTCTaGCTGTTACCCCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GTATSPSCWHPGWRLESVATMAV*LLPPRL
Trigger: CAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGGC...TACAGATTCCAGCCTCCAGCCTGGATGCCAACAGGAAGGTGAGGTTGCCGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp CCAGCCCGGCCGCAGCCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCGGCTGTTATTCAACGTaGCTTCTCTCTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PARPQPSCPSPTGERKTTGCYST*LLSPQP
Trigger: GGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGCC...GGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGGCTGCGGCCGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp ATTCTCTTGCGTAACACCAGTTGCATGTCAGCAGGGTGGCTGAGCTaGACCGTCACGCGCACGATCAGGAACAACCGCTCGTCCACGGGC +
Preference number: 5 (lower is better)
Translates to: ILLRNTSCMSAGWLS*TVTRTIRNNRSSTG
Trigger: GCCCGTGGACGAGCGGTTGTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACGCAAGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GACGGAGGCCAGCCCGCCCTGGCCCACCACTCTGGAGACCGCACCTCCTGCCTGCCTGCATACTTTTCTTaGACAGATTCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: DGGQPALAHHSGDRTSCLPAYFS*TDSSID
Trigger: GTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGG...CAGGCAGGAGGTGCGGTCTCCAGAGTGGTGGGCCAGGGCGGGCTGGCCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCATCCCATGCCGCACAGTaGGATATCTTGGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: PPFPERPHYTAQAFPLRASHAAQ*DILGIC
Trigger: GCAAATTCCCAAGATATCCAACTGTGCGGCATGGGA...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGCCCTCGGCCCCCGTCTGGGGCACCAGGACCATCTGCCAGAGCCCAGGGCCCAATGGATCAGCACGTTaGAAGTATGATCGTATTACT +
Preference number: 5 (lower is better)
Translates to: RPSAPVWGTRTICQSPGPNGSAR*KYDRIT
Trigger: AGTAATACGATCATACTTCAAACGTGCTGATCCATT...GGGCCCTGGGCTCTGGCAGATGGTCCTGGTGCCCCAGACGGGGGCCGAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp CTGGGTCTCCTTCTCAAAGGAGACCTCTGCCACCTCATCGCCTCCTaGGATCCTCTCCCCAACATCACCACTGAGTCGCATCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: LGLLLKGDLCHLIAS*DPLPNITTESHHLH
Trigger: GTGGAGGTGATGCGACTCAGTGGTGATGTTGGGGAGAGGATCGCAGGAGGCGATGAGGTGGCAGAGGTCTCCTTTGAGAAGGAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTTGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 5 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCCTTTCCCACCGGCCCTaGTTGCTGCCTAGACTGTAT +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSLSHRP*LLPRLY
Trigger: ATACAGTCTAGGCAGCAACAAGGGCCGGTGGGAAAG...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCGGCACTTTGGCAGGTTaGTCGCAGATCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSGTLAG*SQIFKA
Trigger: GGCCTTGAAGATCTGCGACAAACCTGCCAAAGTGCC...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTTCTGACGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACGGCGACTCTTCGGGGTaGACCCGGCGGGAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: PSDVMSIIQCSGRIPMPHGDSSG*TRREGA
Trigger: GGCCCCCTCCCGCCGGGTCAACCCCGAAGAGTCGCC...GTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS TCA 90 bp CACAGATTCTCTTGCGTAACACCAGTTGCATGTCAGCAGGGTGGCTaGGCTGGACCGTCACGCGCACGATCAGGAACAACCGCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: HRFSCVTPVACQQGG*AGPSRARSGTTARP
Trigger: TGGACGAGCGGTTGTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACGCAAGAGAATCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GCCTCTGCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ASALVSCSRSFSTSSRRSTATFT*ESPILQ
Trigger: CTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGT...GGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGTTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: SILGRKHRVTPVLCACAQFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTGAGCCTCGCTTCCTGTaGGCATCCAGGCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLEPRFL*ASRLEA
Trigger: AGCCTCCAGCCTGGATGCCAACAGGAAGCGAGGCTC...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAATGCAGTGCGGCTCCTaGCTGACGGAAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERMQCGS*LTEEEE
Trigger: CTCCTCCTCTTCCGTCAGCAAGGAGCCGCACTGCAT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCATTGACACAGATTCTCTaGCGTAACACCAGTTGCATG +
Preference number: 5 (lower is better)
Translates to: PPFPERPHYTAQAFPLRALTQIL*RNTSCM
Trigger: CATGCAACTGGTGTTACGCAAGAGAATCTGTGTCAA...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCCCCATCTCTGACAGCGCCGCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGAAGCTGTTGGTCATTaGATGGAAAGACACATACGG +
Preference number: 5 (lower is better)
Translates to: PPSLTAPRVQLLPFPALGEAVGH*MERHIR
Trigger: CCGTATGTGTCTTTCCATCAAATGACCAACAGCTTC...ACCCAAGGCCGGGAAGGGCAGTAACTGCACACGCGGCGCTGTCAGAGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp TTGACACAGATTCTCTTGCGTAACACCAGTTGCATGTCAGCAGGGTaGCTGAGCTGGACCGTCACGCGCACGATCAGGAACAACCGCTCG +
Preference number: 5 (lower is better)
Translates to: LTQILLRNTSCMSAG*LSWTVTRTIRNNRS
Trigger: CGAGCGGTTGTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACGCAAGAGAATCTGTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGACTTTCCCAAGATGGTGCTACAGGAGGCCGCTGCTGGGTGGATGGCTCAGCTGGTTTACAATGTGCTaGGCTCGATCTGCATACCGC +
Preference number: 5 (lower is better)
Translates to: RTFPRWCYRRPLLGGWLSWFTMC*ARSAYR
Trigger: GCGGTATGCAGATCGAGCCAAGCACATTGTAAACCA...GCTGAGCCATCCACCCAGCAGCGGCCTCCTGTAGCACCATCTTGGGAAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTTCTCCGGAGCTGCTCCAATTCGTGCTCATACATAAGCCTCTGGCGCTCCAGTTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: PSPELLQFVLIHKPLALQFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...CTGGAGCGCCAGAGGCTTATGTATGAGCACGAATTGGAGCAGCTCCGGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGGCTCTGGAGATTTCATaGCCTCTGCTTTGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQALEIS*PLLWSA
Trigger: AGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGC...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GCGTGTGCAGTTACTGCCCTTCCCGGCCTTGGGTGCCATCTGCGGGCCGACCCAGGATATCTTGGGAATTaGCTGACCCTATCAATGTAT +
Preference number: 5 (lower is better)
Translates to: ACAVTALPGLGCHLRADPGYLGN*LTLSMY
Trigger: ATACATTGATAGGGTCAGCAAATTCCCAAGATATCC...TGGGTCGGCCCGCAGATGGCACCCAAGGCCGGGAAGGGCAGTAACTGCACACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCACCATTCCCAGAGCGTCCCCACTACACGGCCCAGGCGTTTCCCCTCAGGGCAGTCCATATACTTCAATaGCCAATGCTCCTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: PPFPERPHYTAQAFPLRAVHILQ*PMLLRK
Trigger: TTTCCGAAGGAGCATTGGCAATTGAAGTATATGGAC...TGCCCTGAGGGGAAACGCCTGGGCCGTGTAGTGGGGACGCTCTGGGAATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTAAGCTTTTGCAATTGTaGATCCAAGTACTCCTGACG +
Preference number: 5 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLKLLQL*IQVLLT
Trigger: CGTCAGGAGTACTTGGATCAACAATTGCAAAAGCTT...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGTCCCCCAGAGGCACTTaGCGGGAAACTGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGSPRGT*RETGTR
Trigger: CCTGGTCCCAGTTTCCCGCAAAGTGCCTCTGGGGGA...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACCCAGCTCCGTTCTCTaGTTGAACCTTGGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERPSSVL*LNLGRP
Trigger: GGGCCTACCAAGGTTCAACAAGAGAACGGAGCTGGG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGTCCACCAGGCTGAGTTaGCCCACTTTCTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPSTRLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAACTCAGCCTGGTGGA...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCCCCCCGAGGCTGTCTTaGAGCAGCCAAGTGAGAACT +
Preference number: 5 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVPPRLS*SSQVRT
Trigger: AGTTCTCACTTGGCTGCTCAAAGACAGCCTCGGGGG...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp TTCCAAGACTCTCAAGCTGTTTCTGTCGTTCCTGTGCAATCTCCTCCGTTTTCCGCCACCATGGCGGTCTaGCTGTTACCCCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FQDSQAVSVVPVQSPPFSATMAV*LLPPRL
Trigger: CAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGGC...GGAAAACGGAGGAGATTGCACAGGAACGACAGAAACAGCTTGAGAGTCTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CCTTCGTGTCCCTCGCCAACTGGGGAGAGAAAGACAACCTGTCCTCGCAGCCAGTCCCAGAAGCTGTATTaGCAGAACACAAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: PSCPSPTGERKTTCPRSQSQKLY*QNTKWD
Trigger: GTCCCACTTTGTGTTCTGCAAATACAGCTTCTGGGA...CTGGCTGCGAGGACAGGTTGTCTTTCTCTCCCCAGTTGGCGAGGGACACGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp AACTCTCCGGGACTGCCCCTGCCGGAGCTGGAAGATTCCTCCTGTTaGGACATCCTTTGCAGAAATCACTTCTACAGGGCAGTATTCACC +
Preference number: 5 (lower is better)
Translates to: NSPGLPLPELEDSSC*DILCRNHFYRAVFT
Trigger: GGTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGGCAGGGGCAGTCCCGGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATCCACCAGGCTGAGTTaGCCCACTTTCTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERSTRLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAACTCAGCCTGGTGGA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGGCTCTGGAGATTTCATaGCCTCTGCTTTGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPALEIS*PLLWSA
Trigger: AGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGC...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp GCCTCTGCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCGCTCTGGAGATTTCATaGCCTCTGCTTTGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: ASALVSCSRSFSTSSRRSALEIS*PLLWSA
Trigger: AGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGC...GGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp GCCTCTGCTTTGGTCAGCTGCTCCCGGAGTTTCTCAACTTCTTCCCGGAGATCCCATGGTGTAGCTGTATaGGACTGGAGACAGATGACC +
Preference number: 5 (lower is better)
Translates to: ASALVSCSRSFSTSSRRSHGVAV*DWRQMT
Trigger: GGTCATCTGTCTCCAGTCCAATACAGCTACACCATG...GGATCTCCGGGAAGAAGTTGAGAAACTCCGGGAGCAGCTGACCAAAGCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGACTGCATCGGATCATaGCTGCCCAGGGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGDCIGS*LPRAFM
Trigger: CATGAAGGCCCTGGGCAGCAATGATCCGATGCAGTC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGTATCTTGGGCAGGAAGCACAGGGTGACTCCCGTCTTGTGTGCGTGCGCACAGTGGAGAATGGTTATTTaGGGGAGAAACAGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SILGRKHRVTPVLCACAQWRMVI*GRNREG
Trigger: GCCCTCTCTGTTTCTCCCCAAAATAACCATTCTCCA...CTGTGCGCACGCACACAAGACGGGAGTCACCCTGTGCTTCCTGCCCAAGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGAAGGGGAGACGGCCGCTaGCCCCTCTTCTCATCGCGG +
Preference number: 5 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRRGDGR*PLFSSR
Trigger: CCGCGATGAGAAGAGGGGCAAGCGGCCGTCTCCCCT...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTTGGGTGCCATCTGCGGGCCGACCCACACTAAGGTGCCACTCCTGGGGCCTTAGTACTCCTGACGTTTaGTTAATGCATTTAGCCATT +
Preference number: 5 (lower is better)
Translates to: PWVPSAGRPTLRCHSWGLSTPDV*LMHLAI
Trigger: AATGGCTAAATGCATTAACAAAACGTCAGGAGTACT...AAGGCCCCAGGAGTGGCACCTTAGTGTGGGTCGGCCCGCAGATGGCACCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp GAGGAGGAGGTGTCCACTTCAGGAGCGACAATCACCGGCTCCTGTTaGTCCCAGAAGCTGTATTTGCAGAACACAAAGTGGGACAGATGC +
Preference number: 5 (lower is better)
Translates to: EEEVSTSGATITGSC*SQKLYLQNTKWDRC
Trigger: GCATCTGTCCCACTTTGTGTTCTGCAAATACAGCTTCTGGGATCAACAGGAGCCGGTGATTGTCGCTCCTGAAGTGGACACCTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp ACTCATTGCAATGATCAAAGACAACCATGCAGTGCGGCTCCTTGCTaGCGGAAGAGGAGGAGGTGTCCACTTCAGGAGCGACAATCACCG +
Preference number: 5 (lower is better)
Translates to: THCNDQRQPCSAAPC*RKRRRCPLQERQSP
Trigger: CGGTGATTGTCGCTCCTGAAGTGGACACCTCCTCCTCTTCCGTCAGCAAGGAGCCGCACTGCATGGTTGTCTTTGATCATTGCAATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDTATFT*ESPILQ
Trigger: CTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGT...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAGCGCCTGTCTTCGTaGCTCGTTCACTGCCAGCTA +
Preference number: 5 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRQRLSS*LVHCQL
Trigger: TAGCTGGCAGTGAACGAGCAACGAAGACAGGCGCTG...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAACCATGCACACCAGTTaGTTCTCCTGGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HIPLSQPQADISPHREARTMHTS*FSWVSF
Trigger: GAAGGAGACCCAGGAGAACAAACTGGTGTGCATGGT...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp CCAGTAGCTTGCAGGATTTTAACCATGCACACCAGTTTGTTCTCCTaGGTCTCCTTCTCAAAGGAGACCTCTGCCACCTCATCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PVACRILTMHTSLFS*VSFSKETSATSSPP
Trigger: AGGAGGCGATGAGGTGGCAGAGGTCTCCTTTGAGAAGGAGACCCAGGAGAACAAACTGGTGTGCATGGTTAAAATCCTGCAAGCTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGCTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGA +
Preference number: 5 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGLSSFM*VAATVR
Trigger: TCGCACAGTTGCTGCAACCAACATGAACGAGGAGAG...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCACAGCGCCTGTCTTCGTaGCTCGTTCACTGCCAGCTA +
Preference number: 5 (lower is better)
Translates to: RKSILPKSMEDKGSGLGAQRLSS*LVHCQL
Trigger: TAGCTGGCAGTGAACGAGCAACGAAGACAGGCGCTG...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CAACACACTATGCTCTCTGACTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGCAGCGCCTGTCTTCGTaGCTCGTTCACTGCCAGCTA +
Preference number: 5 (lower is better)
Translates to: QHTMLSDFQRLTASFGIKQRLSS*LVHCQL
Trigger: TAGCTGGCAGTGAACGAGCAACGAAGACAGGCGCTG...CTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HIPLSQPQADISPHREARRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGACTGCATACCGCAGAGTaGAGAGGGTTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERLHTAE*RGFHHS
Trigger: ACTATGATGAAACCCTCTCAACTCTGCGGTATGCAG...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCTCTGCTTTGGTCAGCTGCTTGGTTTACAATGTGCTaGGCTCGATCTGCATACCGC +
Preference number: 5 (lower is better)
Translates to: PAGPLALEISLPLLWSAAWFTMC*ARSAYR
Trigger: GCGGTATGCAGATCGAGCCAAGCACATTGTAAACCA...AGCAGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CCGGAGTTTCTCAACTTCTTCCCGGAGATCCCGGATAATTCGGGCATTAGGGTCTCCCATGCCGCACAGTaGGATATCTTGGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: PEFLNFFPEIPDNSGIRVSHAAQ*DILGIC
Trigger: GCAAATTCCCAAGATATCCAACTGTGCGGCATGGGA...GACCCTAATGCCCGAATTATCCGGGATCTCCGGGAAGAAGTTGAGAAACTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGCATGGTGTAGCTGTATaGGACTGGAGACAGATGACC +
Preference number: 5 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLHGVAV*DWRQMT
Trigger: GGTCATCTGTCTCCAGTCCAATACAGCTACACCATG...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp TTATCAGCTGCAGGACTCACAGTAGCCACCATGGCGGTCTTGCTGTTACCCCCGATTGGCCTTAACAATTaGTTCCCTCAGCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: LSAAGLTVATMAVLLLPPIGLNN*FPQPHQ
Trigger: CTGATGAGGCTGAGGGAACAAATTGTTAAGGCCAAT...CGGGGGTAACAGCAAGACCGCCATGGTGGCTACTGTGAGTCCTGCAGCTGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAACAAAGGATCTGGACTaGGGGCAGGCACAGACAGGG +
Preference number: 5 (lower is better)
Translates to: RKSILPKSMEDKGSGLGATKDLD*GQAQTG
Trigger: CCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGT...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATCTGGAAACTGTGGTTaGGGATACATCCTGCTGACT +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERSGNCG*GYILLT
Trigger: AGTCAGCAGGATGTATCCCAAACCACAGTTTCCAGA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGAAAGATGCTTTGGGGGTTCAATGGGTCAGTATCTTGGGCAGGAAGCACAGGGGAGGAGCTTTGGCATTaGCGGCACGAAGGATTTGAC +
Preference number: 5 (lower is better)
Translates to: RKMLWGFNGSVSWAGSTGEELWH*RHEGFD
Trigger: GTCAAATCCTTCGTGCCGCAAATGCCAAAGCTCCTC...CCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGCATCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGAAATCACCGGCTCCTGTaGATCCCAGAAGCTGTATTT +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERNHRLL*IPEAVF
Trigger: AAATACAGCTTCTGGGATCAACAGGAGCCGGTGATT...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp CTGCCCCTGCCGGAGCTGGAAGATTCCTCCTGTTGGGACATCCTTTaGAGAAATCACTTCTACAGGGCAGTATTCACCATTCTCATTCTG +
Preference number: 5 (lower is better)
Translates to: LPLPELEDSSCWDIL*RNHFYRAVFTILIL
Trigger: CAGAATGAGAATGGTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGGCAGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTTCTGACGTGATGTCTATAATACAGTGTTCAGGAAGAATTCCCATGCCGCACACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PSDVMSIIQCSGRIPMPHTATFT*ESPILQ
Trigger: CTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGT...GTGCGGCATGGGAATTCTTCCTGAACACTGTATTATAGACATCACGTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTCCCCGGGCATCTCCTTaGGAAAGATTCGTATTTACA +
Preference number: 5 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLPRASP*ERFVFT
Trigger: TGTAAATACGAATCTTTCCAAAGGAGATGCCCGGGG...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGA +
Preference number: 5 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQALSSFM*VAATVR
Trigger: TCGCACAGTTGCTGCAACCAACATGAACGAGGAGAG...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTCCCCCGAGGCTGTCTTaGAGCAGCCAAGTGAGAACT +
Preference number: 5 (lower is better)
Translates to: NILSPWCSCIGLETDDPFPPRLS*SSQVRT
Trigger: AGTTCTCACTTGGCTGCTCAAAGACAGCCTCGGGGG...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp ACAGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTGAGAGGTGGTTTACAATGTGCTaGGCTCGATCTGCATACCGC +
Preference number: 5 (lower is better)
Translates to: TAWFTMCLARSAYRRVERWFTMC*ARSAYR
Trigger: GCGGTATGCAGATCGAGCCAAGCACATTGTAAACCA...CCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CACTGCAAAGTCTTGGGATTAATCCAGGTTGGTCAGCTGTGCCCATCATGGTATTTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: HCKVLGLIQVGQLCPSWYFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...ATACCATGATGGGCACAGCTGACCAACCTGGATTAATCCCAAGACTTTGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CAA 90 bp ACAGCGTGGTTTACAATGTGCTTGGCTCGATCTGCATACCGCAGAGTTGAGAGGTCCCATGCCGCACAGTaGGATATCTTGGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: TAWFTMCLARSAYRRVERSHAAQ*DILGIC
Trigger: GCAAATTCCCAAGATATCCAACTGTGCGGCATGGGA...CCTCTCAACTCTGCGGTATGCAGATCGAGCCAAGCACATTGTAAACCACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGGACTGCATCGGATCATaGCTGCCCAGGGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGDCIGS*LPRAFM
Trigger: CATGAAGGCCCTGGGCAGCAATGATCCGATGCAGTC...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAGGCTGTTATTCAACGTaGCTTCTCTCTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAGCYST*LLSPQP
Trigger: GGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGCC...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATTTCATTGCCACAAAGGATCTGGACTaGGGGCAGGCACAGACAGGG +
Preference number: 5 (lower is better)
Translates to: ISFSDSSSRSFSSGDFIATKDLD*GQAQTG
Trigger: CCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGT...GGCAATGAAATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp GAGACTTTCCAGGTGTCTAAAGATGCCAAAACATCCACAGAGAAACCGCTAAGACGGTTCTCAGGGTTCTaGTGGCTCCTGTCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: ETFQVSKDAKTSTEKPLRRFSGF*WLLSAL
Trigger: CAAGGCCGACAGGAGCCACAAGAACCCTGAGAACCG...TCTTAGCGGTTTCTCTGTGGATGTTTTGGCATCTTTAGACACCTGGAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp GCAGACGATCTAAAGTCAGGAGGTTTTCTACAGCCAGCACGCTCCTaGGGTACTTTTCAATATAAGCCTCCGAGTCAGCAGAAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ADDLKSGGFLQPARS*GTFQYKPPSQQKLG
Trigger: ACCCAGCTTCTGCTGACTCGGAGGCTTATATTGAAAAGTACCTCAGGAGCGTGCTGGCTGTAGAAAACCTCCTGACTTTAGATCGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACGCAACTGTGCGAGATTaGTTACCCTCAGACATCAAC +
Preference number: 5 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDATVRD*LPSDIN
Trigger: GTTGATGTCTGAGGGTAACAAATCTCGCACAGTTGC...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp TTCCAAGACTCTCAAGCTGTTTCTGTCGTTCCTGTGCAATCTCCTCCGTTTTCCCTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGA +
Preference number: 5 (lower is better)
Translates to: FQDSQAVSVVPVQSPPFSLSSFM*VAATVR
Trigger: TCGCACAGTTGCTGCAACCAACATGAACGAGGAGAG...GGAAAACGGAGGAGATTGCACAGGAACGACAGAAACAGCTTGAGAGTCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCTCCACCAGGCTGAGTTaGCCCACTTTCTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGSTRLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAACTCAGCCTGGTGGA...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTTCCACCAGGCTGAGTTaGCCCACTTTCTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TILVLHGGILVLILSFCFSTRLS*PTFSPD
Trigger: ATCTGGAGAGAAAGTGGGCAAACTCAGCCTGGTGGA...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp GAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: EVNSTQKHGGQRIWTWGRRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...CCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCTCCCATGCCGCACAGTaGGATATCTTGGGAATTTGC +
Preference number: 5 (lower is better)
Translates to: KSILPKSMEDKGSGLGAGSHAAQ*DILGIC
Trigger: GCAAATTCCCAAGATATCCAACTGTGCGGCATGGGA...GCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CACATCCCTCTTTCCCAGCCACAAGCTGACATTAGTCCGCACCGAGAAGCAAGAGCTGGGTTTTCAACATaGGCTGCCATTCTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: HIPLSQPQADISPHREARAGFST*AAILAN
Trigger: ATTAGCAAGAATGGCAGCCAATGTTGAAAACCCAGC...TCTTGCTTCTCGGTGCGGACTAATGTCAGCTTGTGGCTGGGAAAGAGGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp ATTTTAGCCTCAGGAAACTATCTGATCTCCTGCCCTCCTTTTACCTaGCGGAGGCAAGACTCTCATCTGATTGTGGGTCAAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: ILASGNYLISCPPFT*RRQDSHLIVGQELL
Trigger: GAGAAGCTCTTGACCCACAATCAGATGAGAGTCTTGCCTCCGGCAGGTAAAAGGAGGGCAGGAGATCAGATAGTTTCCTGAGGCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS CCA 90 bp TTTCAATATAAGCCTCCGAGTCAGCAGAAGCTGGGTTTTCAACATTaGCTGCCATTCTTGCTAATGCTTCCCGTTCTTCCACTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: FQYKPPSQQKLGFQH*LPFLLMLPVLPLPG
Trigger: CCCAGGGAGTGGAAGAACGGGAAGCATTAGCAAGAATGGCAGCCAATGTTGAAAACCCAGCTTCTGCTGACTCGGAGGCTTATATTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLTATFT*ESPILQ
Trigger: CTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGT...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGGGATTAAGAATAACCTaGTTTGCATCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLGLRIT*FASTST
Trigger: GGTGGATGTGGATGCAAACAAGGTTATTCTTAATCC...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDVHCKV*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGACTTTGCAGTGGAC...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATGCAACTGTGCGAGATTaGTTACCCTCAGACATCAAC +
Preference number: 5 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDATVRD*LPSDIN
Trigger: GTTGATGTCTGAGGGTAACAAATCTCGCACAGTTGC...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCTCTCCTCGTTCATGTaGGTTGCAGCAACTGTGCGA +
Preference number: 5 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGLSSFM*VAATVR
Trigger: TCGCACAGTTGCTGCAACCAACATGAACGAGGAGAG...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AGAACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 5 (lower is better)
Translates to: RTILVLHGGILVLILSFCCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...GCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp TGGAAAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTCCCCCGAGGCTGTCTTaGAGCAGCCAAGTGAGAACT +
Preference number: 5 (lower is better)
Translates to: WKRKSILPKSMEDKGSGLPPRLS*SSQVRT
Trigger: AGTTCTCACTTGGCTGCTCAAAGACAGCCTCGGGGG...AAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAAGCCACCATGGCGGTCTaGCTGTTACCCCCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKATMAV*LLPPRL
Trigger: CAGCCTCGGGGGTAACAGCAAGACCGCCATGGTGGC...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACATTGGCCTTAACAATTaGTTCCCTCAGCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDIGLNN*FPQPHQ
Trigger: CTGATGAGGCTGAGGGAACAAATTGTTAAGGCCAAT...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ACACCATTAGTGTCTGCAGCCCACCAGGAAGGCACCACGGACTTTGTGGAGAGATCTCTCACCAATAGATaGGCCTTAACAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: TPLVSAAHQEGTTDFVERSLTNR*ALTICS
Trigger: GGAACAAATTGTTAAGGCCAATCTATTGGTGAGAGA...TCTCTCCACAAAGTCCGTGGTGCCTTCCTGGTGGGCTGCAGACACTAATGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp CCTGCTCAAGTCAGGAACTCTGGCTCGTTCTACTCCACTGTAAGTCAAACCGATTGGCAACCCAGTAGCTaGCAGGATTTTAACCATGCA +
Preference number: 5 (lower is better)
Translates to: PAQVRNSGSFYSTVSQTDWQPSS*QDFNHA
Trigger: TGCATGGTTAAAATCCTGCAAGCTACTGGGTTGCCA...ATCGGTTTGACTTACAGTGGAGTAGAACGAGCCAGAGTTCCTGACTTGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGAGCTCCGTTCTCTTGTaGAACCTTGGTAGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLSSVLL*NLGRPR
Trigger: TCTGGGCCTACCAAGGTTCAACAAGAGAACGGAGCT...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp GTAGCTTGTGACAGCCAGTTTAGAAAGTCCGTCGACATAAGGTCCCAACACACTCCCCGGGCATCTCCTTaGGAAAGATTCGTATTTACA +
Preference number: 5 (lower is better)
Translates to: VACDSQFRKSVDIRSQHTPRASP*ERFVFT
Trigger: TGTAAATACGAATCTTTCCAAAGGAGATGCCCGGGG...AGTGTGTTGGGACCTTATGTCGACGGACTTTCTAAACTGGCTGTCACAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CAA 90 bp AAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: KEVNSTQKHGGQRIWTWGVHCKV*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGACTTTGCAGTGGAC...GCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQVHCKV*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGACTTTGCAGTGGAC...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp TCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTACAAGCAACTGTGCGAGATTaGTTACCCTCAGACATCAAC +
Preference number: 5 (lower is better)
Translates to: SCPHGVAVLDWRQMTHLQATVRD*LPSDIN
Trigger: GTTGATGTCTGAGGGTAACAAATCTCGCACAGTTGC...TTGTAAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AATATCCTGTCCCCATGGTGTAGCTGTATTGGACTGGAGACAGATGACCCATTTAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: NILSPWCSCIGLETDDPFRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...AAATGGGTCATCTGTCTCCAGTCCAATACAGCTACACCATGGGGACAGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGAGATTCATTGCCTCTGCTTaGGTCAGCTGCTCCCGGAGT +
Preference number: 5 (lower is better)
Translates to: NRFEGRKLSEMNCQGQVRFIASA*VSCSRS
Trigger: ACTCCGGGAGCAGCTGACCAAAGCAGAGGCAATGAA...TCTCACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AAAGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGGCTCTGGAGATTTCATaGCCTCTGCTTTGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: KGSQFYPKAWRTKDLDLGALEIS*PLLWSA
Trigger: AGCTGACCAAAGCAGAGGCAATGAAATCTCCAGAGC...CCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGCATGGTGTAGCTGTATaGGACTGGAGACAGATGACC +
Preference number: 5 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLHGVAV*DWRQMT
Trigger: GGTCATCTGTCTCCAGTCCAATACAGCTACACCATG...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGGACTGCATCGGATCATaGCTGCCCAGGGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVDCIGS*LPRAFM
Trigger: CATGAAGGCCCTGGGCAGCAATGATCCGATGCAGTC...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACAGGGATCTGTCTCTCACCAATAGATaGGCCTTAACAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KSMEDKGSGLGAGTDRDLSLTNR*ALTICS
Trigger: GGAACAAATTGTTAAGGCCAATCTATTGGTGAGAGA...CAGATCCCTGTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp GAGGAGGCACAGTTGAGGCCCCCACTTTACCCGGGTACAGAAGAAACAAAGCTTGCATCCTCTGGAATATaGGAGACAATTTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: EEAQLRPPLYPGTEETKLASSGI*ETISKV
Trigger: GACTTTTGAAATTGTCTCCAATATTCCAGAGGATGC...AAGCTTTGTTTCTTCTGTACCCGGGTAAAGTGGGGGCCTCAACTGTGCCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGGCAATGCCTCTTCCTTaGTCACCGACTACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLAMPLP*SPTTEA
Trigger: TGCTTCTGTAGTCGGTGACAAAGGAAGAGGCATTGC...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 90 bp ATCCCAGAAGCTGTATTTGCAGAACACAAAGTGGGACAGATGCTGTaGCAACCCAGTAGCTTGCAGGATTTTAACCATGCACACCAGTTT +
Preference number: 5 (lower is better)
Translates to: IPEAVFAEHKVGQML*QPSSLQDFNHAHQF
Trigger: AAACTGGTGTGCATGGTTAAAATCCTGCAAGCTACTGGGTTGCCACAGCATCTGTCCCACTTTGTGTTCTGCAAATACAGCTTCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCAGGATTAAGAATAACCTaGTTTGCATCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: SQFYPKAWRTKDLDLGQAGLRIT*FASTST
Trigger: GGTGGATGTGGATGCAAACAAGGTTATTCTTAATCC...TGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATCTGCATACCGCAGAGTaGAGAGGGTTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDLHTAE*RGFHHS
Trigger: ACTATGATGAAACCCTCTCAACTCTGCGGTATGCAG...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp ATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAGGCACAGACGGATATCTTGGGAATTaGCTGACCCTATCAATGTAT +
Preference number: 5 (lower is better)
Translates to: ILPKSMEDKGSGLGAGTDGYLGN*LTLSMY
Trigger: ATACATTGATAGGGTCAGCAAATTCCCAAGATATCC...GTCTGTGCCTGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp AGGAAGTCAATTCTACCCAAAAGCATGGAGGACAAAGGATCTGGACTTGGGGCAAGCCGGGCATCTCCTTaGGAAAGATTCGTATTTACA +
Preference number: 5 (lower is better)
Translates to: RKSILPKSMEDKGSGLGASRASP*ERFVFT
Trigger: TGTAAATACGAATCTTTCCAAAGGAGATGCCCGGCT...TGCCCCAAGTCCAGATCCTTTGTCCTCCATGCTTTTGGGTAGAATTGACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS TCA 90 bp CCAGAGGTCCATGAGAGTTTCTTAAAACCACTGCTTAATGGAATCTaGCCATATTGTATCAGCTGGCTCCTTACAGTCAAATCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: PEVHESFLKPLLNGI*PYCISWLLTVKSRR
Trigger: CCGGCGAGATTTGACTGTAAGGAGCCAGCTGATACAATATGGTCAGATTCCATTAAGCAGTGGTTTTAAGAAACTCTCATGGACCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS CCA 90 bp GGAAGCCTCCATAAAAACCTAAAAGGACTGGGTTCAGAGAGCTTCTaGATTGCTAAACACACAGGGCCCAATAGGAAGGTAAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: GSLHKNLKGLGSESF*IAKHTGPNRKVRTH
Trigger: ATGAGTTCTTACCTTCCTATTGGGCCCTGTGTGTTTAGCAATCCAGAAGCTCTCTGAACCCAGTCCTTTTAGGTTTTTATGGAGGCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS-3UTR CAA 90 bp CTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGAAGGTCTCGAACTTTTTCATCTGCATACCGCAGAGTaGAGAGGGTTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: LSTSDGFLWDQEGLELFHLHTAE*RGFHHS
Trigger: ACTATGATGAAACCCTCTCAACTCTGCGGTATGCAG...ATGAAAAAGTTCGAGACCTTCTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp AACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGAGATGGTTTACAATGTGCTaGGCTCGATCTGCATACCGC +
Preference number: 5 (lower is better)
Translates to: NRFEGRKLSEMNCQGQVRWFTMC*ARSAYR
Trigger: GCGGTATGCAGATCGAGCCAAGCACATTGTAAACCA...TCTCACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CAACACACTATGCTCTCTGACTTTCAACGTCTGACGGCTTCCTTTGGGATCAAGGGATATCTTGGGAATTaGCTGACCCTATCAATGTAT +
Preference number: 5 (lower is better)
Translates to: QHTMLSDFQRLTASFGIKGYLGN*LTLSMY
Trigger: ATACATTGATAGGGTCAGCAAATTCCCAAGATATCC...CTTGATCCCAAAGGAAGCCGTCAGACGTTGAAAGTCAGAGAGCATAGTGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCATGGTGTAGCTGTATaGGACTGGAGACAGATGACC +
Preference number: 5 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSHGVAV*DWRQMT
Trigger: GGTCATCTGTCTCCAGTCCAATACAGCTACACCATG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAGGCTGTTATTCAACGTaGCTTCTCTCTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPGCYST*LLSPQP
Trigger: GGGCTGAGGAGAGAGAAGCAACGTTGAATAACAGCC...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ACTATTCTCGTTCTTCATGGAGGGATCCTGGTCCTCATCCTCTCGTTCTGCTTTTCTCTCACCAATAGATaGGCCTTAACAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: TILVLHGGILVLILSFCFSLTNR*ALTICS
Trigger: GGAACAAATTGTTAAGGCCAATCTATTGGTGAGAGA...AAAGCAGAACGAGAGGATGAGGACCAGGATCCCTCCATGAAGAACGAGAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS-3UTR CAA 90 bp ATGCCTCTTCCTTTGTCACCGACTACAGAAGCACATCATTCTCCCAGGTTTTTGATATCCAACAGCCTGTaGTCCAGTTTTTCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: MPLPLSPTTEAHHSPRFLISNSL*SSFSKD
Trigger: GTCTTTGGAAAAACTGGACAACAGGCTGTTGGATAT...CAAAAACCTGGGAGAATGATGTGCTTCTGTAGTCGGTGACAAAGGAAGAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 90 bp ACTTCTACAGGGCAGTATTCACCATTCTCATTCTGTTCCAAGATTTaGACCCAGAATTCCAATTTCCTGGTCACTTCACTCCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: TSTGQYSPFSFCSKI*TQNSNFLVTSLHLS
Trigger: GGACAGATGGAGTGAAGTGACCAGGAAATTGGAATTCTGGGTTCAAATCTTGGAACAGAATGAGAATGGTGAATACTGCCCTGTAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp TTAAACAGATTTGAAGGAAGAAAGTTGAGTGAAATGAACTGTCAGGGCCAGGTGCCCCGGGCATCTCCTTaGGAAAGATTCGTATTTACA +
Preference number: 5 (lower is better)
Translates to: LNRFEGRKLSEMNCQGQVPRASP*ERFVFT
Trigger: TGTAAATACGAATCTTTCCAAAGGAGATGCCCGGGG...CACCTGGCCCTGACAGTTCATTTCACTCAACTTTCTTCCTTCAAATCTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521515.1
CDS-3UTR CAA 90 bp CGCACAGTTGGATATCTTGGGAATTTGCTGACCCTATCAATGTATGTTCCTTTATGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 5 (lower is better)
Translates to: RTVGYLGNLLTLSMYVPLCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...TAAAGGAACATACATTGATAGGGTCAGCAAATTCCCAAGATATCCAACTGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp ATTTCCTGGATTAGCTTCTCAGATTCTTCCAGCCGGTCCTTTAGCTCTGGAGATGGATATCTTGGGAATTaGCTGACCCTATCAATGTAT +
Preference number: 5 (lower is better)
Translates to: ISWISFSDSSSRSFSSGDGYLGN*LTLSMY
Trigger: ATACATTGATAGGGTCAGCAAATTCCCAAGATATCC...ATCTCCAGAGCTAAAGGACCGGCTGGAAGAATCTGAGAAGCTAATCCAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522355.5
ENST00000523968.1
CDS-3UTR CAA 90 bp CCGGGCATCTCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTGTCCACTGCAAAGTCTaGGGATTAATCCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: PGISFGKIRIYRIKNNLVVHCKV*GLIQVG
Trigger: ACCAACCTGGATTAATCCCAAGACTTTGCAGTGGAC...AACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGAGATGCCCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CAA 90 bp CCGGGCATCTCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTGCAACTGTGCGAGATTaGTTACCCTCAGACATCAAC +
Preference number: 5 (lower is better)
Translates to: PGISFGKIRIYRIKNNLVATVRD*LPSDIN
Trigger: GTTGATGTCTGAGGGTAACAAATCTCGCACAGTTGC...AACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGAGATGCCCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CAA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAAAGGGTTGTGAGGGACTaGTTAATGTTGCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKRVVRD*LMLLPS
Trigger: GGAAGGGAGCAACATTAACAAGTCCCTCACAACCCT...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp ATACATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCACTGCATACCGCAGAGTaGAGAGGGTTTCATCATAGT +
Preference number: 5 (lower is better)
Translates to: IHDTMTQLMSSFTEQAIPLHTAE*RGFHHS
Trigger: ACTATGATGAAACCCTCTCAACTCTGCGGTATGCAG...TGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATACAGGCAGACGACGATaGCGGCTCGCAAATGATTTC +
Preference number: 5 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNTGRRR*RLANDF
Trigger: GAAATCATTTGCGAGCCGCAATCGTCGTCTGCCTGT...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAATGTGTGAGGGTGATTTaGAAAACTGCATGGGATCGG +
Preference number: 5 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKCVRVI*KTAWDR
Trigger: CCGATCCCATGCAGTTTTCAAAATCACCCTCACACA...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CCGGGCATCTCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTTGGAATCTGACCATATaGTATCAGCTGGCTCCTTAC +
Preference number: 5 (lower is better)
Translates to: PGISFGKIRIYRIKNNLVWNLTI*YQLAPY
Trigger: GTAAGGAGCCAGCTGATACAATATGGTCAGATTCCA...AACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGAGATGCCCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS GCA 90 bp TCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTTaGATCCACATCCACCACACATTTGGTATGCAAGTCAGTCTCTCG +
Preference number: 5 (lower is better)
Translates to: SFGKIRIYRIKNNLV*IHIHHTFGMQVSLS
Trigger: CGAGAGACTGACTTGCATACCAAATGTGTGGTGGATGTGGATGCAAACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000524189.6
CDS GCA 90 bp TTTCCGGGGATCGTTTATTTTATGTCCATATACTTCAATTGCCAATaGTCCTTCGGAAAGATGCTCGATAAAGTCTTCGGTGATGTTAAC +
Preference number: 5 (lower is better)
Translates to: FPGIVYFMSIYFNCQ*SFGKMLDKVFGDVN
Trigger: GTTAACATCACCGAAGACTTTATCGAGCATCTTTCCGAAGGAGCATTGGCAATTGAAGTATATGGACATAAAATAAACGATCCCCGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp ACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTAGAAAAACATCCACCACACATTaGGTATGCAAGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TMTQLMSSFTEQAIPSRKTSTTH*VCKSVS
Trigger: AGAGACTGACTTGCATACCAAATGTGTGGTGGATGT...TTTTCTACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521515.1
ENST00000522355.5
CDS-3UTR CAA 90 bp CATGACACCATGACACAACTAATGAGCAGTTTTACAGAGCAAGCTATTCCAAGTCCTGCATACTTTTCTTaGACAGATTCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: HDTMTQLMSSFTEQAIPSPAYFS*TDSSID
Trigger: GTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGG...ACTTGGAATAGCTTGCTCTGTAAAACTGCTCATTAGTTGTGTCATGGTGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521515.1
CDS-3UTR CAA 90 bp GCCATCAAAAGCATTCTGCAGGATATTCTCTCCAAGGCACTTGAAAACAATATCCCTGCATACTTTTCTTaGACAGATTCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: AIKSILQDILSKALENNIPAYFS*TDSSID
Trigger: GTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGG...GATATTGTTTTCAAGTGCCTTGGAGAGAATATCCTGCAGAATGCTTTTGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS-3UTR CAA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATCTGAGCGGTCTAACTTaGACACATCCAATGCCAACA +
Preference number: 5 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNLSGLT*THPMPT
Trigger: TGTTGGCATTGGATGTGTCAAAGTTAGACCGCTCAG...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 90 bp TCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTTGTTTaGATCCACATCCACCACACATTTGGTATGCAAGTCAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SFGKIRIYRIKNNLV*IHIHHTFGMQVSLS
Trigger: AGAGAGACTGACTTGCATACCAAATGTGTGGTGGATGTGGATGCAAACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS GCA 90 bp TCTTCTACACCATCAGTAGTTGACAGGATGCTGGATTCTATTACCTaGATACTTTTCTTTGACAGATTCATCCATAGACCAGAAACAATG +
Preference number: 5 (lower is better)
Translates to: SSTPSVVDRMLDSIT*ILFFDRFIHRPETM
Trigger: CATTGTTTCTGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTAATAGAATCCAGCATCCTGTCAACTACTGATGGTGTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS-3UTR CAA 90 bp GTTTTATTGAGAAGCTGTTGGTCATTTGATGGAAAGACACATACGGTACAAAATATTGGCCTTAACAATTaGTTCCCTCAGCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: VLLRSCWSFDGKTHTVQNIGLNN*FPQPHQ
Trigger: CTGATGAGGCTGAGGGAACAAATTGTTAAGGCCAAT...ATTTTGTACCGTATGTGTCTTTCCATCAAATGACCAACAGCTTCTCAATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS-3UTR CAA 90 bp AACAATATCTTGACCTGCATACTTTTCTTTGACAGATTCATCCATAGACCAGAAGGATTAAGAATAACCTaGTTTGCATCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: NNILTCILFFDRFIHRPEGLRIT*FASTST
Trigger: GGTGGATGTGGATGCAAACAAGGTTATTCTTAATCC...TTCTGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTCAAGATATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523968.1
CDS GCA 90 bp ATTTTATGTCCATATACTTCAATTGCCAATGCTCCTTCGGAAAGATaGTCGATAAAGTCTTCGGTGATGTTAACAGAAAACTCATTGCAA +
Preference number: 5 (lower is better)
Translates to: ILCPYTSIANAPSER*SIKSSVMLTENSLQ
Trigger: TTGCAATGAGTTTTCTGTTAACATCACCGAAGACTTTATCGAGCATCTTTCCGAAGGAGCATTGGCAATTGAAGTATATGGACATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp TCAGCGAGGCCAGGTTGGTGGCGGAGCCCGAGAGGGTaGCGCTCCGGCGGGCCTCGGGGGCACCCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: SARPGWWRSPRG*RSGGPRGHPAG
Trigger: TCCGGCTGGGTGCCCCCGAGGCCCGCCGGAGCGCCACCCTCTCGGGCTCCGCCACCAACCTGGCCTCGCTGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CCA 72 bp CGGCCTTGGCCAGGGCAGCTGTCAGCGAGGCCAGGTTaGTGGCGGAGCCCGAGAGGGTGGCGCTCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: RPWPGQLSARPG*WRSPRGWRSGG
Trigger: CCCGCCGGAGCGCCACCCTCTCGGGCTCCGCCACCAACCTGGCCTCGCTGACAGCTGCCCTGGCCAAGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 72 bp TCCTGCAGCCGCCGAGGAACTCGTTCGGCTTCCGTCTaGCGCGGCCACCGGCGACTCTTCGGGGTTGACCCG +
Preference number: 6 (lower is better)
Translates to: SCSRRGTRSASV*RGHRRLFGVDP
Trigger: CGGGTCAACCCCGAAGAGTCGCCGGTGGCCGCGGCAGACGGAAGCCGAACGAGTTCCTCGGCGGCTGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522355.5
CDS TCA 72 bp AACAACCGCTCGTCCACGGGCGTGCCCCTGCTGAGCTaGGGGCAGCCATGCACCGCGGAGTCCCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: NNRSSTGVPLLS*GQPCTAESQEA
Trigger: AGCCTCCTGGGACTCCGCGGTGCATGGCTGCCCTCAGCTCAGCAGGGGCACGCCCGTGGACGAGCGGTTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp GGGGCACGGGCTGGTGTGCGAGGGGAGACGGCCGCTTaGCCCTCTTCTCATCGCGGACGGGAAAGAGAGACT +
Preference number: 6 (lower is better)
Translates to: GARAGVRGETAA*PSSHRGRERET
Trigger: AGTCTCTCTTTCCCGTCCGCGATGAGAAGAGGGGCAAGCGGCCGTCTCCCCTCGCACACCAGCCCGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp TCGGCAGGCCCCACGTATCTCACCACGCCCGTTTTGTaGGCGCCCACGGTGACGAACTCGCCCTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: SAGPTYLTTPVL*APTVTNSPSRS
Trigger: GCTCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACGTGGGGCCTGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 90 bp CCCTCTTGGAAGTCGGCAGGCCCCACGTATCTCACCACGCCCGTTTaGTGGGCGCCCACGGTGACGAACTCGCCCTCTCGGAGCCACTCC +
Preference number: 6 (lower is better)
Translates to: PSWKSAGPTYLTTPV*WAPTVTNSPSRSHS
Trigger: GGAGTGGCTCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACGTGGGGCCTGCCGACTTCCAAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS TCA 72 bp CGTATCTCACCACGCCCGTTTTGTGGGCGCCCACGGTaGCGAACTCGCCCTCTCGGAGCCACTCCGGGACCT +
Preference number: 6 (lower is better)
Translates to: RISPRPFCGRPR*RTRPLGATPGP
Trigger: AGGTCCCGGAGTGGCTCCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 72 bp CCGGCTGAGCCTGGTGTGCGAGGGGAGACGGCCGCTTaGCCCTCTTCTCATCGCGGACGGGAAAGAGAGACT +
Preference number: 6 (lower is better)
Translates to: PAEPGVRGETAA*PSSHRGRERET
Trigger: AGTCTCTCTTTCCCGTCCGCGATGAGAAGAGGGGCAAGCGGCCGTCTCCCCTCGCACACCAGGCTCAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523130.1
CDS CAA 72 bp AAGTCGGCAGGCCCCACGTATCTCACCACGCCCGTTTaGTGGGCGCCCACGGTGACGAACTCGCCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: KSAGPTYLTTPV*WAPTVTNSPSR
Trigger: CCGAGAGGGCGAGTTCGTCACCGTGGGCGCCCACAAAACGGGCGTGGTGAGATACGTGGGGCCTGCCGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 72 bp TCCGCACCGCCACTTTCACTTTGGAGTCCCCCATCCTaGAGCCGCCGAGGAACTCGTTCGGCTTCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: SAPPLSLWSPPS*SRRGTRSASVC
Trigger: GCAGACGGAAGCCGAACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
CDS CAA 90 bp GTCTCTCGCCGGTTCATGGGTCGTATCCGCACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAGCCGCCGAGGAACTCGTTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: VSRRFMGRIRTATFT*ESPILQPPRNSFGF
Trigger: GAAGCCGAACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGATACGACCCATGAACCGGCGAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000524189.6
CDS CAA 72 bp CGGTTCATGGGTCGTATCCGCACCGCCACTTTCACTTaGGAGTCCCCCATCCTGCAGCCGCCGAGGAACTCG +
Preference number: 6 (lower is better)
Translates to: RFMGRIRTATFT*ESPILQPPRNS
Trigger: CGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGATACGACCCATGAACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000523968.1
ENST00000524189.6
CDS CCA 72 bp GGTTCATGGGTCGTATCCGCACCGCCACTTTCACTTTaGAGTCCCCCATCCTGCAGCCGCCGAGGAACTCGT +
Preference number: 6 (lower is better)
Translates to: GSWVVSAPPLSL*SPPSCSRRGTR
Trigger: ACGAGTTCCTCGGCGGCTGCAGGATGGGGGACTCCAAAGTGAAAGTGGCGGTGCGGATACGACCCATGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000523968.1
ENST00000524189.6
CDS CCA 72 bp CGTAACACCAGTTGCATGTCAGCAGGGTGGCTGAGCTaGACCGTCACGCGCACGATCAGGAACAACCGCTCG +
Preference number: 6 (lower is better)
Translates to: RNTSCMSAGWLS*TVTRTIRNNRS
Trigger: CGAGCGGTTGTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp CCCCCAGAAAAGTTCGCCCTAAGGCAGCGGCTCAGCTaGCCCAGGATTTCCGGTTCTCAGGGTTCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: PPEKFALRQRLS*PRISGSQGSCG
Trigger: GCCACAAGAACCCTGAGAACCGGAAATCCTGGGCCAGCTGAGCCGCTGCCTTAGGGCGAACTTTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp AACAGAGAGGGCGGGGGCAGGAGCTATTCCTCTGGAAACTGTGGTTaGGGATACATCCTGCTGACTTTCCCACCGGCCCTTGTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: NREGGGRSYSSGNCG*GYILLTFPPALVAA
Trigger: GGCAGCAACAAGGGCCGGTGGGAAAGTCAGCAGGATGTATCCCAAACCACAGTTTCCAGAGGAATAGCTCCTGCCCCCGCCCTCTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 90 bp GGTAAGAAGCAGGGCTGGGCCTGCAGCCTAGGGTTCCTTTTCTCCTaGGCCGGTGCTCCCCTTCTTTCACTATGCCATCCTGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: GKKQGWACSLGFLFS*AGAPLLSLCHPVSP
Trigger: TGGAGAGACAGGATGGCATAGTGAAAGAAGGGGAGCACCGGCCAAGGAGAAAAGGAACCCTAGGCTGCAGGCCCAGCCCTGCTTCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS TCA 72 bp TCTTGCGTAACACCAGTTGCATGTCAGCAGGGTGGCTaGGCTGGACCGTCACGCGCACGATCAGGAACAACC +
Preference number: 6 (lower is better)
Translates to: SCVTPVACQQGG*AGPSRARSGTT
Trigger: GGTTGTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp TCCCCAACATCACCACTGAGTCGCATCACCTCCACGTaGAGCCGACCTGCCACCTCTCCTTTCTGGTTGATG +
Preference number: 6 (lower is better)
Translates to: SPTSPLSRITST*SRPATSPFWLM
Trigger: CATCAACCAGAAAGGAGAGGTGGCAGGTCGGCTGCACGTGGAGGTGATGCGACTCAGTGGTGATGTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp GGCGGGGGCAGGAGCTATTCCTCTGGAAACTGTGGTTaGGGATACATCCTGCTGACTTTCCCACCGGCCCTT +
Preference number: 6 (lower is better)
Translates to: GGGRSYSSGNCG*GYILLTFPPAL
Trigger: AAGGGCCGGTGGGAAAGTCAGCAGGATGTATCCCAAACCACAGTTTCCAGAGGAATAGCTCCTGCCCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 90 bp GACGGCCGCTTGCCCCTCTTCTCATCGCGGACGGGAAAGAGAGACTaGAGGAGCTTTGGCATTTGCGGCACGAAGGATTTGACAGGATTC +
Preference number: 6 (lower is better)
Translates to: DGRLPLFSSRTGKRD*RSFGICGTKDLTGF
Trigger: GAATCCTGTCAAATCCTTCGTGCCGCAAATGCCAAAGCTCCTCAAGTCTCTCTTTCCCGTCCGCGATGAGAAGAGGGGCAAGCGGCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 72 bp CTTCTCAAAGGAGACCTCTGCCACCTCATCGCCTCCTaGGATCCTCTCCCCAACATCACCACTGAGTCGCAT +
Preference number: 6 (lower is better)
Translates to: LLKGDLCHLIAS*DPLPNITTESH
Trigger: ATGCGACTCAGTGGTGATGTTGGGGAGAGGATCGCAGGAGGCGATGAGGTGGCAGAGGTCTCCTTTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp ATTCTCTTGCGTAACACCAGTTGCATGTCAGCAGGGTaGCTGAGCTGGACCGTCACGCGCACGATCAGGAAC +
Preference number: 6 (lower is better)
Translates to: ILLRNTSCMSAG*LSWTVTRTIRN
Trigger: GTTCCTGATCGTGCGCGTGACGGTCCAGCTCAGCCACCCTGCTGACATGCAACTGGTGTTACGCAAGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp ACTGAGTTAGAGGACACCCAGCCAGTGTCTGCCGCTTaGGGTGCAGGGAAAACTCCCCCAACATTTGGTCAC +
Preference number: 6 (lower is better)
Translates to: TELEDTQPVSAA*GAGKTPPTFGH
Trigger: GTGACCAAATGTTGGGGGAGTTTTCCCTGCACCCCAAGCGGCAGACACTGGCTGGGTGTCCTCTAACTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS CAA 90 bp GAACTCTCCGGGACTGCCCCTGCCGGAGCTGGAAGATTCCTCCTGTaGGGACATCCTTTGCAGAAATCACTTCTACAGGGCAGTATTCAC +
Preference number: 6 (lower is better)
Translates to: ELSGTAPAGAGRFLL*GHPLQKSLLQGSIH
Trigger: GTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGGCAGGGGCAGTCCCGGAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp AATGATCAAAGACAACCATGCAGTGCGGCTCCTTGCTaGCGGAAGAGGAGGAGGTGTCCACTTCAGGAGCGA +
Preference number: 6 (lower is better)
Translates to: NDQRQPCSAAPC*RKRRRCPLQER
Trigger: TCGCTCCTGAAGTGGACACCTCCTCCTCTTCCGTCAGCAAGGAGCCGCACTGCATGGTTGTCTTTGATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp TCCATCTGTCCCGAAGACTACGTGTCTTTGCTTGGATaGTTCCCAAATCCCACAGGGCGGGGTTTTTCCGGG +
Preference number: 6 (lower is better)
Translates to: SICPEDYVSLLG*FPNPTGRGFSG
Trigger: CCCGGAAAAACCCCGCCCTGTGGGATTTGGGAATCATCCAAGCAAAGACACGTAGTCTTCGGGACAGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp TTGCCCCTCTTCTCATCGCGGACGGGAAAGAGAGACTaGAGGAGCTTTGGCATTTGCGGCACGAAGGATTTG +
Preference number: 6 (lower is better)
Translates to: LPLFSSRTGKRD*RSFGICGTKDL
Trigger: CAAATCCTTCGTGCCGCAAATGCCAAAGCTCCTCAAGTCTCTCTTTCCCGTCCGCGATGAGAAGAGGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 90 bp CCTCCGAGTCAGCAGAAGCTGGGTTTTCAACATTGGCTGCCATTCTaGCTAATGCTTCCCGTTCTTCCACTCCCTGGGCATCCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: PPSQQKLGFQHWLPF*LMLPVLPLPGHPLE
Trigger: TTCCAGAGGATGCCCAGGGAGTGGAAGAACGGGAAGCATTAGCAAGAATGGCAGCCAATGTTGAAAACCCAGCTTCTGCTGACTCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp GCCCTCCTTTTACCTGCCGGAGGCAAGACTCTCATCTaGTTGTGGGTCAAGAGCTTCTCATTCCACAAGGTC +
Preference number: 6 (lower is better)
Translates to: ALLLPAGGKTLI*LWVKSFSFHKV
Trigger: GACCTTGTGGAATGAGAAGCTCTTGACCCACAATCAGATGAGAGTCTTGCCTCCGGCAGGTAAAAGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS GCA 72 bp CACTTCACTCCATCTGTCCCGAAGACTACGTGTCTTTaGTTGGATGATTCCCAAATCCCACAGGGCGGGGTT +
Preference number: 6 (lower is better)
Translates to: HFTPSVPKTTCL*LDDSQIPQGGV
Trigger: AACCCCGCCCTGTGGGATTTGGGAATCATCCAAGCAAAGACACGTAGTCTTCGGGACAGATGGAGTGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp AGAGGAGGAGGTGTCCACTTCAGGAGCGACAATCACCGGCTCCTGTaGATCCCAGAAGCTGTATTTGCAGAACACAAAGTGGGACAGATG +
Preference number: 6 (lower is better)
Translates to: RGGGVHFRSDNHRLL*IPEAVFAEHKVGQM
Trigger: CATCTGTCCCACTTTGTGTTCTGCAAATACAGCTTCTGGGATCAACAGGAGCCGGTGATTGTCGCTCCTGAAGTGGACACCTCCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp CTTCTCATCGCGGACGGGAAAGAGAGACTTGAGGAGCTTTGGCATTaGCGGCACGAAGGATTTGACAGGATTCAAGTAGGATGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: LLIADGKERLEELWH*RHEGFDRIQVGCCK
Trigger: CTTGCAGCATCCTACTTGAATCCTGTCAAATCCTTCGTGCCGCAAATGCCAAAGCTCCTCAAGTCTCTCTTTCCCGTCCGCGATGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS TCA 72 bp GGAGACTCTGTGCAAAACCCTGGCGGCCGTGAACATTaGCACAGATTCTCTTGCGTAACACCAGTTGCATGT +
Preference number: 6 (lower is better)
Translates to: GDSVQNPGGREH*HRFSCVTPVAC
Trigger: ACATGCAACTGGTGTTACGCAAGAGAATCTGTGTCAATGTTCACGGCCGCCAGGGTTTTGCACAGAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp TCACTCCATCTGTCCCGAAGACTACGTGTCTTTGCTTaGATGATTCCCAAATCCCACAGGGCGGGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: SLHLSRRLRVFA*MIPKSHRAGFF
Trigger: GAAAAACCCCGCCCTGTGGGATTTGGGAATCATCCAAGCAAAGACACGTAGTCTTCGGGACAGATGGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp AAGGTTACTGAGTCCTGGATCTGGAGAATGGTTATTTaGGGGAGAAACAGAGAGGGCGGGGGCAGGAGCTAT +
Preference number: 6 (lower is better)
Translates to: KVTESWIWRMVI*GRNREGGGRSY
Trigger: ATAGCTCCTGCCCCCGCCCTCTCTGTTTCTCCCCAAAATAACCATTCTCCAGATCCAGGACTCAGTAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 72 bp GCGGACGGGAAAGAGAGACTTGAGGAGCTTTGGCATTaGCGGCACGAAGGATTTGACAGGATTCAAGTAGGA +
Preference number: 6 (lower is better)
Translates to: ADGKERLEELWH*RHEGFDRIQVG
Trigger: TCCTACTTGAATCCTGTCAAATCCTTCGTGCCGCAAATGCCAAAGCTCCTCAAGTCTCTCTTTCCCGTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS CAA 90 bp ACTGCCCCTGCCGGAGCTGGAAGATTCCTCCTGTTGGGACATCCTTaGCAGAAATCACTTCTACAGGGCAGTATTCACCATTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: TAPAGAGRFLLLGHP*QKSLLQGSIHHSHS
Trigger: AGAATGAGAATGGTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGGCAGGGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp TCAGGAAACTATCTGATCTCCTGCCCTCCTTTTACCTaGCGGAGGCAAGACTCTCATCTGATTGTGGGTCAA +
Preference number: 6 (lower is better)
Translates to: SGNYLISCPPFT*RRQDSHLIVGQ
Trigger: TTGACCCACAATCAGATGAGAGTCTTGCCTCCGGCAGGTAAAAGGAGGGCAGGAGATCAGATAGTTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS CCA 72 bp TGCAGGATTTTAACCATGCACACCAGTTTGTTCTCCTaGGTCTCCTTCTCAAAGGAGACCTCTGCCACCTCA +
Preference number: 6 (lower is better)
Translates to: CRILTMHTSLFS*VSFSKETSATS
Trigger: TGAGGTGGCAGAGGTCTCCTTTGAGAAGGAGACCCAGGAGAACAAACTGGTGTGCATGGTTAAAATCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp GCCGGAGCTGGAAGATTCCTCCTGTTGGGACATCCTTaGCAGAAATCACTTCTACAGGGCAGTATTCACCAT +
Preference number: 6 (lower is better)
Translates to: AGAGRFLLLGHP*QKSLLQGSIHH
Trigger: ATGGTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp CTAAAGTCAGGAGGTTTTCTACAGCCAGCACGCTCCTaGGGTACTTTTCAATATAAGCCTCCGAGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LKSGGFLQPARS*GTFQYKPPSQQ
Trigger: CTGCTGACTCGGAGGCTTATATTGAAAAGTACCTCAGGAGCGTGCTGGCTGTAGAAAACCTCCTGACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp ACCGGCCCTTGTTGCTGCCTAGACTGTATGATGGAATaGGATCTTGTCGGCTTCCAGACAATCTGTTCACAT +
Preference number: 6 (lower is better)
Translates to: TGPCCCLDCMME*DLVGFQTICSH
Trigger: ATGTGAACAGATTGTCTGGAAGCCGACAAGATCTCATTCCATCATACAGTCTAGGCAGCAACAAGGGCCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp CGGCACGAAGGATTTGACAGGATTCAAGTAGGATGCTaGAAGGTTACTGAGTCCTGGATCTGGAGAATGGTT +
Preference number: 6 (lower is better)
Translates to: RHEGFDRIQVGC*KVTESWIWRMV
Trigger: AACCATTCTCCAGATCCAGGACTCAGTAACCTTGCAGCATCCTACTTGAATCCTGTCAAATCCTTCGTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523130.1
ENST00000524189.6
CDS GCA 72 bp CCGGAGCTGGAAGATTCCTCCTGTTGGGACATCCTTTaGAGAAATCACTTCTACAGGGCAGTATTCACCATT +
Preference number: 6 (lower is better)
Translates to: PELEDSSCWDIL*RNHFYRAVFTI
Trigger: AATGGTGAATACTGCCCTGTAGAAGTGATTTCTGCAAAGGATGTCCCAACAGGAGGAATCTTCCAGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp CCAGTAGCTTGCAGGATTTTAACCATGCACACCAGTTaGTTCTCCTGGGTCTCCTTCTCAAAGGAGACCTCT +
Preference number: 6 (lower is better)
Translates to: PVACRILTMHTS*FSWVSFSKETS
Trigger: AGAGGTCTCCTTTGAGAAGGAGACCCAGGAGAACAAACTGGTGTGCATGGTTAAAATCCTGCAAGCTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp CACAAAGTGGGACAGATGCTGTGGCAACCCAGTAGCTaGCAGGATTTTAACCATGCACACCAGTTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: HKVGQMLWQPSS*QDFNHAHQFVL
Trigger: GAGAACAAACTGGTGTGCATGGTTAAAATCCTGCAAGCTACTGGGTTGCCACAGCATCTGTCCCACTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp TCATGGAAGGTCTCATGTGTTCTGGGGGCTCTGAGCGGTCTAACTTaGACACATCCAATGCCAACAGACAGTATACATTCTTCCATCAGT +
Preference number: 6 (lower is better)
Translates to: SWKVSCVLGALSGLT*THPMPTDSIHSSIS
Trigger: ACTGATGGAAGAATGTATACTGTCTGTTGGCATTGGATGTGTCAAAGTTAGACCGCTCAGAGCCCCCAGAACACATGAGACCTTCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp AGGAAGGAATGCTACACAGAATGGCCAAGAAAAGTCTaGACAGACAGGACGTGCTGTGTTCAGTCATGCACT +
Preference number: 6 (lower is better)
Translates to: RKECYTEWPRKV*TDRTCCVQSCT
Trigger: AGTGCATGACTGAACACAGCACGTCCTGTCTGTTCAGACTTTTCTTGGCCATTCTGTGTAGCATTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS GCA 72 bp CAGAAGCTGTATTTGCAGAACACAAAGTGGGACAGATaGTGTGGCAACCCAGTAGCTTGCAGGATTTTAACC +
Preference number: 6 (lower is better)
Translates to: QKLYLQNTKWDR*CGNPVACRILT
Trigger: GGTTAAAATCCTGCAAGCTACTGGGTTGCCACAGCATCTGTCCCACTTTGTGTTCTGCAAATACAGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp GCTGTATTTGCAGAACACAAAGTGGGACAGATGCTGTaGCAACCCAGTAGCTTGCAGGATTTTAACCATGCA +
Preference number: 6 (lower is better)
Translates to: AVFAEHKVGQML*QPSSLQDFNHA
Trigger: TGCATGGTTAAAATCCTGCAAGCTACTGGGTTGCCACAGCATCTGTCCCACTTTGTGTTCTGCAAATACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp GTCTCATGTGTTCTGGGGGCTCTGAGCGGTCTAACTTaGACACATCCAATGCCAACAGACAGTATACATTCT +
Preference number: 6 (lower is better)
Translates to: VSCVLGALSGLT*THPMPTDSIHS
Trigger: AGAATGTATACTGTCTGTTGGCATTGGATGTGTCAAAGTTAGACCGCTCAGAGCCCCCAGAACACATGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp TCTGTTCCAAGATTTGAACCCAGAATTCCAATTTCCTaGTCACTTCACTCCATCTGTCCCGAAGACTACGTG +
Preference number: 6 (lower is better)
Translates to: SVPRFEPRIPIS*SLHSICPEDYV
Trigger: CACGTAGTCTTCGGGACAGATGGAGTGAAGTGACCAGGAAATTGGAATTCTGGGTTCAAATCTTGGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS TCA 72 bp TCCCATCCACCAGCTTCTGGGTCATCAAGATTATCCTaGGAGCTGAAATCATCAGCATTTAAGTCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: SHPPASGSSRLS*ELKSSAFKSRN
Trigger: ATTCCTGGACTTAAATGCTGATGATTTCAGCTCTCAGGATAATCTTGATGACCCAGAAGCTGGTGGATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CCA 72 bp GAGATCTTGTCGGCTTCCAGACAATCTGTTCACATTTaGAGAACTGATACTCCTCCTGCTCAACTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: EILSASRQSVHI*RTDTPPAQLSF
Trigger: AAAGGAAAGTTGAGCAGGAGGAGTATCAGTTCTCCAAATGTGAACAGATTGTCTGGAAGCCGACAAGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp CACTTCTACAGGGCAGTATTCACCATTCTCATTCTGTTCCAAGATTaGAACCCAGAATTCCAATTTCCTGGTCACTTCACTCCATCTGTC +
Preference number: 6 (lower is better)
Translates to: HFYRAVFTILILFQD*NPEFQFPGHFTPSV
Trigger: GACAGATGGAGTGAAGTGACCAGGAAATTGGAATTCTGGGTTCAAATCTTGGAACAGAATGAGAATGGTGAATACTGCCCTGTAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp GCATCTCCTTTGGAAAGATTCGTATTTACAGGATTAAGAATAACCTaGTTTGCATCCACATCCACCACACATTTGGTATGCAAGTCAGTC +
Preference number: 6 (lower is better)
Translates to: ASPLERFVFTGLRIT*FASTSTTHLVCKSV
Trigger: GACTGACTTGCATACCAAATGTGTGGTGGATGTGGATGCAAACAAGGTTATTCTTAATCCTGTAAATACGAATCTTTCCAAAGGAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000523968.1
ENST00000524189.6
CDS GCA 72 bp CCATATACTTCAATTGCCAATGCTCCTTCGGAAAGATaGTCGATAAAGTCTTCGGTGATGTTAACAGAAAAC +
Preference number: 6 (lower is better)
Translates to: PYTSIANAPSER*SIKSSVMLTEN
Trigger: GTTTTCTGTTAACATCACCGAAGACTTTATCGAGCATCTTTCCGAAGGAGCATTGGCAATTGAAGTATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp CCATCAGTAGTTGACAGGATGCTGGATTCTATTACCTaGATACTTTTCTTTGACAGATTCATCCATAGACCA +
Preference number: 6 (lower is better)
Translates to: PSVVDRMLDSIT*ILFFDRFIHRP
Trigger: TGGTCTATGGATGAATCTGTCAAAGAAAAGTATGCAGGTAATAGAATCCAGCATCCTGTCAACTACTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS CAA 72 bp AACAGACAGGACGTGCTGTGTTCAGTCATGCACTTTTaGTCAAATCACATTTCTAATCGGTTGACAATCATG +
Preference number: 6 (lower is better)
Translates to: NRQDVLCSVMHF*SNHISNRLTIM
Trigger: CATGATTGTCAACCGATTAGAAATGTGATTTGACAAAAAGTGCATGACTGAACACAGCACGTCCTGTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS TCA 72 bp GATTTTCCTGCTCATCATAGAATGGATCAGCACGTTTaGAGTATGATCGTATTACTGGGTTATCTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: DFPAHHRMDQHV*SMIVLLGYLLH
Trigger: GTGAAGAAGATAACCCAGTAATACGATCATACTTCAAACGTGCTGATCCATTCTATGATGAGCAGGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS GCA 72 bp AAGATTCGTATTTACAGGATTAAGAATAACCTTGTTTaGATCCACATCCACCACACATTTGGTATGCAAGTC +
Preference number: 6 (lower is better)
Translates to: KIRIYRIKNNLV*IHIHHTFGMQV
Trigger: GACTTGCATACCAAATGTGTGGTGGATGTGGATGCAAACAAGGTTATTCTTAATCCTGTAAATACGAATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521515.1
ENST00000522355.5
ENST00000522846.1
ENST00000523968.1
ENST00000524189.6
CDS GCA 72 bp ATCGTTTATTTTATGTCCATATACTTCAATTGCCAATaGTCCTTCGGAAAGATGCTCGATAAAGTCTTCGGT +
Preference number: 6 (lower is better)
Translates to: IVYFMSIYFNCQ*SFGKMLDKVFG
Trigger: ACCGAAGACTTTATCGAGCATCTTTCCGAAGGAGCATTGGCAATTGAAGTATATGGACATAAAATAAACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 72 bp GCTTTTGCAATTGTTGATCCAAGTACTCCTGACGTTTaGTTAATGCATTTAGCCATTTTCTACGAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: AFAIVDPSTPDV*LMHLAIFYEVS
Trigger: AGAGACTTCGTAGAAAATGGCTAAATGCATTAACAAAACGTCAGGAGTACTTGGATCAACAATTGCAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524189.6
CDS CAA 90 bp TTTCCAATCAACATTAAAAACTCTAATAGCAAACACGGGAGGGTGTaGTCTGTACTTTCTACAGTTATGCAAAAGAATCCTATGGTACTC +
Preference number: 6 (lower is better)
Translates to: FPINIKNSNSKHGRV*SVLSTVMQKNPMVL
Trigger: GAGTACCATAGGATTCTTTTGCATAACTGTAGAAAGTACAGACAACACCCTCCCGTGTTTGCTATTAGAGTTTTTAATGTTGATTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS CAA 72 bp AACATTAAAAACTCTAATAGCAAACACGGGAGGGTGTaGTCTGTACTTTCTACAGTTATGCAAAAGAATCCT +
Preference number: 6 (lower is better)
Translates to: NIKNSNSKHGRV*SVLSTVMQKNP
Trigger: AGGATTCTTTTGCATAACTGTAGAAAGTACAGACAACACCCTCCCGTGTTTGCTATTAGAGTTTTTAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522846.1
CDS TCA 72 bp GTAATTTCATCAACGTATACCAAGAATGGCACACAGTaGATCTCCCATTTTCCAATCAACATTAAAAACTCT +
Preference number: 6 (lower is better)
Translates to: VISSTYTKNGTQ*ISHFPINIKNS
Trigger: AGAGTTTTTAATGTTGATTGGAAAATGGGAGATTCACTGTGTGCCATTCTTGGTATACGTTGATGAAATTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522846.1